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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Gcaud383.t1.start1 | Gcaud383.t1.start1 | Gracilaria caudata M_176_S67 male | start_codon | NODE_2075_length_6946_cov_4.737418 2841..2843 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Gcaud383.t1.stop1 | Gcaud383.t1.stop1 | Gracilaria caudata M_176_S67 male | stop_codon | NODE_2075_length_6946_cov_4.737418 5388..5390 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gcaud383.t1 ID=Gcaud383.t1|Name=Gcaud383.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=850bp MYVNSSVIDNEFFECDVPFRFNWPRLRHPAKWLSSEEPWFTPRHAGNSSI RYMIPFLAQFGKEWLEDCSRAKEIVEQKMEISSNGVLMTYATKHAQMLTT GGAFESDEEKMDANWSNTWSTILTHHEIRLSPPSEKGMAMPFGGKPDEFH GFSKYESKIKRLIENLPEELFEVTDYGDEKVKVLQGISAFHLESFMYFLL SEVIHVVGEQAVTEVPHEAVILPTTDKAEGDIQDILENDTYFGVSDQNIE SSSTSLTRAPSENMMVDEEISDEEDEVHDRNECEQSRSEIGTRTNGTSEE LPAVEDFALRAFERTFREKHLEVNSYQDILENSNYQQERRWPGSWSEVRV MEYTVHLENIFALSYMGLMDSWGFLIERKAFSPEDRQLYYSELCQDSDTV LARTVAAGRMLVSRCRSLWYYWSMCDLPNSVPPALGDIDHIGQSGGGRIK FIGYIMETVRDCLAKWTEHNITEDKDTSSWSPVVETESACIQFDSSDALS RQIRMLPNCQLEAHKYASVFRTFYERVVWECQKSILKLLDNDECAFGPSD VELMILCILGFPGLRVSLADRSGVSELPGFEVLPLICGSTWGVRIEFNTI DEKCVKVQMRIIPDRFSRITFVFEWARWIHNFEAWMKVLTCEYDEEDLSE VEKSLSESSFENSVGAIRANGDNVSGATHVSVEGGEKNDIGVSYSRNESM EDMADHDPTSNSFASAGSDLDVDVTLNNEEEEAEHQEDRIAAEENNGDDV RVDCTCDGKYRLNTKAKRVFVTDRFGTKKYFWEWEVWRPQRAFEKHRYPI LHDLQTTMVTCRGLGKETDEQKFADECGSAVADDGLRGNDSFANADEHV* back to topspliced messenger RNA >Gcaud383.t1 ID=Gcaud383.t1|Name=Gcaud383.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=2550bp|location=Sequence derived from alignment at NODE_2075_length_6946_cov_4.737418:2841..5390+ (Gracilaria caudata M_176_S67 male)|Notes=Excludes all bases but those of type(s): exon.
ATGTACGTCAACAGCTCCGTGATCGACAATGAGTTCTTCGAATGTGATGT TCCCTTCCGATTCAATTGGCCTAGGCTGCGTCACCCGGCCAAATGGCTTT CCTCGGAAGAGCCTTGGTTCACGCCACGCCACGCCGGGAATTCTTCTATT CGGTACATGATTCCCTTCCTGGCACAGTTTGGAAAGGAGTGGCTTGAGGA TTGTTCTCGTGCCAAAGAAATCGTTGAGCAAAAGATGGAAATTTCCTCGA ACGGGGTTTTGATGACATACGCTACGAAACATGCGCAGATGTTAACAACA GGAGGTGCATTTGAATCCGACGAAGAGAAGATGGATGCCAATTGGTCGAA TACATGGTCAACTATTCTCACGCACCACGAAATCCGGCTATCTCCGCCTT CTGAGAAAGGAATGGCAATGCCATTTGGTGGAAAACCAGATGAATTCCAT GGTTTCTCAAAATACGAATCAAAGATCAAGCGACTTATTGAAAATTTGCC GGAAGAACTGTTCGAGGTAACTGATTACGGGGACGAAAAAGTCAAAGTTC TTCAAGGAATTTCAGCATTCCATTTGGAAAGCTTCATGTATTTCTTGCTT TCAGAAGTAATTCACGTTGTGGGAGAGCAAGCAGTAACGGAAGTCCCACA TGAAGCCGTGATATTACCCACTACGGACAAAGCAGAAGGAGACATACAGG ACATTCTCGAAAATGACACATATTTCGGGGTTTCTGACCAAAATATAGAA AGCTCTTCAACAAGTTTGACAAGAGCACCCTCAGAAAACATGATGGTGGA CGAAGAAATATCGGACGAAGAAGACGAAGTTCATGATAGAAATGAATGTG AACAATCCCGAAGCGAGATCGGCACCCGTACAAATGGAACTAGTGAAGAA CTGCCAGCAGTGGAAGATTTCGCTCTGCGGGCGTTTGAGAGAACCTTTCG TGAGAAACATTTAGAAGTAAATTCTTACCAGGATATTCTTGAGAACTCTA ATTATCAGCAGGAGAGGAGATGGCCAGGGTCTTGGTCGGAGGTAAGAGTG ATGGAATACACGGTTCACTTGGAGAATATTTTCGCTTTATCATATATGGG TTTGATGGATTCATGGGGGTTTCTAATTGAAAGAAAGGCCTTCAGTCCTG AGGACCGTCAGTTGTACTACTCTGAACTTTGCCAGGACAGCGACACAGTG CTGGCTCGAACAGTGGCGGCGGGAAGAATGCTTGTTTCACGGTGCAGGTC ACTTTGGTATTATTGGAGTATGTGCGATTTGCCGAATAGTGTACCACCCG CTTTAGGAGATATAGATCACATTGGGCAGTCCGGAGGAGGTCGGATCAAA TTCATTGGGTACATCATGGAGACAGTGCGCGACTGTTTGGCTAAATGGAC CGAGCACAACATTACAGAAGATAAGGATACAAGCTCGTGGAGTCCAGTGG TAGAGACAGAAAGTGCTTGTATACAATTTGATTCGAGTGACGCACTTTCG AGGCAGATAAGAATGTTGCCAAACTGCCAACTTGAAGCTCACAAATATGC GTCAGTCTTTCGGACATTTTATGAGCGAGTCGTTTGGGAATGTCAGAAGA GTATTTTGAAGTTGTTAGACAACGATGAATGTGCATTTGGTCCGTCTGAC GTGGAGCTGATGATATTATGCATTCTAGGATTCCCTGGTCTTCGAGTGAG CCTCGCGGATAGATCTGGCGTATCCGAGCTTCCTGGCTTTGAAGTGTTAC CTCTCATCTGTGGATCAACCTGGGGAGTACGTATTGAATTCAATACGATT GATGAGAAGTGCGTGAAGGTTCAAATGAGAATAATTCCTGATCGATTCTC GAGGATTACTTTTGTTTTTGAGTGGGCACGGTGGATACATAACTTTGAAG CATGGATGAAGGTATTGACATGCGAGTATGATGAGGAGGATCTTTCTGAA GTTGAGAAAAGCCTCAGTGAATCCTCATTCGAAAACAGTGTTGGCGCAAT TAGGGCCAATGGAGACAATGTTTCGGGGGCTACCCATGTTTCGGTTGAGG GTGGGGAAAAAAACGACATCGGTGTTAGTTATTCAAGGAACGAGAGCATG GAAGATATGGCAGATCATGACCCAACCTCCAATTCGTTTGCAAGCGCTGG AAGTGATCTTGATGTCGATGTTACTTTGAATAACGAGGAGGAAGAAGCCG AGCACCAGGAGGACAGAATTGCCGCAGAAGAAAACAATGGCGATGATGTG CGCGTGGATTGCACATGCGACGgcaaatacagactcaacactaaggctaa gcgggtttttgttacggacagattcggtacgaagaagtacttctgggaat gggaagtatggagACCACAGCGAGCATTCGAGAAACATAGGTATCCCATT CTGCACGACCTGCAAACCACCATGGTGACATGCAGGGGCCTCGGAAAAGA AACGGACGAGCAAAAATTTGCAGATGAATGCGGCTCTGCTGTTGCCGACG ACGGCCTCAGAGGCAACGATTCATTTGCCAACGCAGATGAGCATGTGTAG back to topprotein sequence of Gcaud383.t1 >Gcaud383.t1 ID=Gcaud383.t1|Name=Gcaud383.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=850bp
MYVNSSVIDNEFFECDVPFRFNWPRLRHPAKWLSSEEPWFTPRHAGNSSI RYMIPFLAQFGKEWLEDCSRAKEIVEQKMEISSNGVLMTYATKHAQMLTT GGAFESDEEKMDANWSNTWSTILTHHEIRLSPPSEKGMAMPFGGKPDEFH GFSKYESKIKRLIENLPEELFEVTDYGDEKVKVLQGISAFHLESFMYFLL SEVIHVVGEQAVTEVPHEAVILPTTDKAEGDIQDILENDTYFGVSDQNIE SSSTSLTRAPSENMMVDEEISDEEDEVHDRNECEQSRSEIGTRTNGTSEE LPAVEDFALRAFERTFREKHLEVNSYQDILENSNYQQERRWPGSWSEVRV MEYTVHLENIFALSYMGLMDSWGFLIERKAFSPEDRQLYYSELCQDSDTV LARTVAAGRMLVSRCRSLWYYWSMCDLPNSVPPALGDIDHIGQSGGGRIK FIGYIMETVRDCLAKWTEHNITEDKDTSSWSPVVETESACIQFDSSDALS RQIRMLPNCQLEAHKYASVFRTFYERVVWECQKSILKLLDNDECAFGPSD VELMILCILGFPGLRVSLADRSGVSELPGFEVLPLICGSTWGVRIEFNTI DEKCVKVQMRIIPDRFSRITFVFEWARWIHNFEAWMKVLTCEYDEEDLSE VEKSLSESSFENSVGAIRANGDNVSGATHVSVEGGEKNDIGVSYSRNESM EDMADHDPTSNSFASAGSDLDVDVTLNNEEEEAEHQEDRIAAEENNGDDV RVDCTCDGKYRLNTKAKRVFVTDRFGTKKYFWEWEVWRPQRAFEKHRYPI LHDLQTTMVTCRGLGKETDEQKFADECGSAVADDGLRGNDSFANADEHV* back to topmRNA from alignment at NODE_2075_length_6946_cov_4.737418:2841..5390+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gcaud383.t1 ID=Gcaud383.t1|Name=Gcaud383.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=2550bp|location=Sequence derived from alignment at NODE_2075_length_6946_cov_4.737418:2841..5390+ (Gracilaria caudata M_176_S67 male) ATGTACGTCAACAGCTCCGTGATCGACAATGAGTTCTTCGAATGTGATGT
TCCCTTCCGATTCAATTGGCCTAGGCTGCGTCACCCGGCCAAATGGCTTT
CCTCGGAAGAGCCTTGGTTCACGCCACGCCACGCCGGGAATTCTTCTATT
CGGTACATGATTCCCTTCCTGGCACAGTTTGGAAAGGAGTGGCTTGAGGA
TTGTTCTCGTGCCAAAGAAATCGTTGAGCAAAAGATGGAAATTTCCTCGA
ACGGGGTTTTGATGACATACGCTACGAAACATGCGCAGATGTTAACAACA
GGAGGTGCATTTGAATCCGACGAAGAGAAGATGGATGCCAATTGGTCGAA
TACATGGTCAACTATTCTCACGCACCACGAAATCCGGCTATCTCCGCCTT
CTGAGAAAGGAATGGCAATGCCATTTGGTGGAAAACCAGATGAATTCCAT
GGTTTCTCAAAATACGAATCAAAGATCAAGCGACTTATTGAAAATTTGCC
GGAAGAACTGTTCGAGGTAACTGATTACGGGGACGAAAAAGTCAAAGTTC
TTCAAGGAATTTCAGCATTCCATTTGGAAAGCTTCATGTATTTCTTGCTT
TCAGAAGTAATTCACGTTGTGGGAGAGCAAGCAGTAACGGAAGTCCCACA
TGAAGCCGTGATATTACCCACTACGGACAAAGCAGAAGGAGACATACAGG
ACATTCTCGAAAATGACACATATTTCGGGGTTTCTGACCAAAATATAGAA
AGCTCTTCAACAAGTTTGACAAGAGCACCCTCAGAAAACATGATGGTGGA
CGAAGAAATATCGGACGAAGAAGACGAAGTTCATGATAGAAATGAATGTG
AACAATCCCGAAGCGAGATCGGCACCCGTACAAATGGAACTAGTGAAGAA
CTGCCAGCAGTGGAAGATTTCGCTCTGCGGGCGTTTGAGAGAACCTTTCG
TGAGAAACATTTAGAAGTAAATTCTTACCAGGATATTCTTGAGAACTCTA
ATTATCAGCAGGAGAGGAGATGGCCAGGGTCTTGGTCGGAGGTAAGAGTG
ATGGAATACACGGTTCACTTGGAGAATATTTTCGCTTTATCATATATGGG
TTTGATGGATTCATGGGGGTTTCTAATTGAAAGAAAGGCCTTCAGTCCTG
AGGACCGTCAGTTGTACTACTCTGAACTTTGCCAGGACAGCGACACAGTG
CTGGCTCGAACAGTGGCGGCGGGAAGAATGCTTGTTTCACGGTGCAGGTC
ACTTTGGTATTATTGGAGTATGTGCGATTTGCCGAATAGTGTACCACCCG
CTTTAGGAGATATAGATCACATTGGGCAGTCCGGAGGAGGTCGGATCAAA
TTCATTGGGTACATCATGGAGACAGTGCGCGACTGTTTGGCTAAATGGAC
CGAGCACAACATTACAGAAGATAAGGATACAAGCTCGTGGAGTCCAGTGG
TAGAGACAGAAAGTGCTTGTATACAATTTGATTCGAGTGACGCACTTTCG
AGGCAGATAAGAATGTTGCCAAACTGCCAACTTGAAGCTCACAAATATGC
GTCAGTCTTTCGGACATTTTATGAGCGAGTCGTTTGGGAATGTCAGAAGA
GTATTTTGAAGTTGTTAGACAACGATGAATGTGCATTTGGTCCGTCTGAC
GTGGAGCTGATGATATTATGCATTCTAGGATTCCCTGGTCTTCGAGTGAG
CCTCGCGGATAGATCTGGCGTATCCGAGCTTCCTGGCTTTGAAGTGTTAC
CTCTCATCTGTGGATCAACCTGGGGAGTACGTATTGAATTCAATACGATT
GATGAGAAGTGCGTGAAGGTTCAAATGAGAATAATTCCTGATCGATTCTC
GAGGATTACTTTTGTTTTTGAGTGGGCACGGTGGATACATAACTTTGAAG
CATGGATGAAGGTATTGACATGCGAGTATGATGAGGAGGATCTTTCTGAA
GTTGAGAAAAGCCTCAGTGAATCCTCATTCGAAAACAGTGTTGGCGCAAT
TAGGGCCAATGGAGACAATGTTTCGGGGGCTACCCATGTTTCGGTTGAGG
GTGGGGAAAAAAACGACATCGGTGTTAGTTATTCAAGGAACGAGAGCATG
GAAGATATGGCAGATCATGACCCAACCTCCAATTCGTTTGCAAGCGCTGG
AAGTGATCTTGATGTCGATGTTACTTTGAATAACGAGGAGGAAGAAGCCG
AGCACCAGGAGGACAGAATTGCCGCAGAAGAAAACAATGGCGATGATGTG
CGCGTGGATTGCACATGCGACGgcaaatacagactcaacactaaggctaa
gcgggtttttgttacggacagattcggtacgaagaagtacttctgggaat
gggaagtatggagACCACAGCGAGCATTCGAGAAACATAGGTATCCCATT
CTGCACGACCTGCAAACCACCATGGTGACATGCAGGGGCCTCGGAAAAGA
AACGGACGAGCAAAAATTTGCAGATGAATGCGGCTCTGCTGTTGCCGACG
ACGGCCTCAGAGGCAACGATTCATTTGCCAACGCAGATGAGCATGTGTAG
back to topCoding sequence (CDS) from alignment at NODE_2075_length_6946_cov_4.737418:2841..5390+ >Gcaud383.t1 ID=Gcaud383.t1|Name=Gcaud383.t1|organism=Gracilaria caudata M_176_S67 male|type=CDS|length=2550bp|location=Sequence derived from alignment at NODE_2075_length_6946_cov_4.737418:2841..5390+ (Gracilaria caudata M_176_S67 male) ATGTACGTCAACAGCTCCGTGATCGACAATGAGTTCTTCGAATGTGATGT TCCCTTCCGATTCAATTGGCCTAGGCTGCGTCACCCGGCCAAATGGCTTT CCTCGGAAGAGCCTTGGTTCACGCCACGCCACGCCGGGAATTCTTCTATT CGGTACATGATTCCCTTCCTGGCACAGTTTGGAAAGGAGTGGCTTGAGGA TTGTTCTCGTGCCAAAGAAATCGTTGAGCAAAAGATGGAAATTTCCTCGA ACGGGGTTTTGATGACATACGCTACGAAACATGCGCAGATGTTAACAACA GGAGGTGCATTTGAATCCGACGAAGAGAAGATGGATGCCAATTGGTCGAA TACATGGTCAACTATTCTCACGCACCACGAAATCCGGCTATCTCCGCCTT CTGAGAAAGGAATGGCAATGCCATTTGGTGGAAAACCAGATGAATTCCAT GGTTTCTCAAAATACGAATCAAAGATCAAGCGACTTATTGAAAATTTGCC GGAAGAACTGTTCGAGGTAACTGATTACGGGGACGAAAAAGTCAAAGTTC TTCAAGGAATTTCAGCATTCCATTTGGAAAGCTTCATGTATTTCTTGCTT TCAGAAGTAATTCACGTTGTGGGAGAGCAAGCAGTAACGGAAGTCCCACA TGAAGCCGTGATATTACCCACTACGGACAAAGCAGAAGGAGACATACAGG ACATTCTCGAAAATGACACATATTTCGGGGTTTCTGACCAAAATATAGAA AGCTCTTCAACAAGTTTGACAAGAGCACCCTCAGAAAACATGATGGTGGA CGAAGAAATATCGGACGAAGAAGACGAAGTTCATGATAGAAATGAATGTG AACAATCCCGAAGCGAGATCGGCACCCGTACAAATGGAACTAGTGAAGAA CTGCCAGCAGTGGAAGATTTCGCTCTGCGGGCGTTTGAGAGAACCTTTCG TGAGAAACATTTAGAAGTAAATTCTTACCAGGATATTCTTGAGAACTCTA ATTATCAGCAGGAGAGGAGATGGCCAGGGTCTTGGTCGGAGGTAAGAGTG ATGGAATACACGGTTCACTTGGAGAATATTTTCGCTTTATCATATATGGG TTTGATGGATTCATGGGGGTTTCTAATTGAAAGAAAGGCCTTCAGTCCTG AGGACCGTCAGTTGTACTACTCTGAACTTTGCCAGGACAGCGACACAGTG CTGGCTCGAACAGTGGCGGCGGGAAGAATGCTTGTTTCACGGTGCAGGTC ACTTTGGTATTATTGGAGTATGTGCGATTTGCCGAATAGTGTACCACCCG CTTTAGGAGATATAGATCACATTGGGCAGTCCGGAGGAGGTCGGATCAAA TTCATTGGGTACATCATGGAGACAGTGCGCGACTGTTTGGCTAAATGGAC CGAGCACAACATTACAGAAGATAAGGATACAAGCTCGTGGAGTCCAGTGG TAGAGACAGAAAGTGCTTGTATACAATTTGATTCGAGTGACGCACTTTCG AGGCAGATAAGAATGTTGCCAAACTGCCAACTTGAAGCTCACAAATATGC GTCAGTCTTTCGGACATTTTATGAGCGAGTCGTTTGGGAATGTCAGAAGA GTATTTTGAAGTTGTTAGACAACGATGAATGTGCATTTGGTCCGTCTGAC GTGGAGCTGATGATATTATGCATTCTAGGATTCCCTGGTCTTCGAGTGAG CCTCGCGGATAGATCTGGCGTATCCGAGCTTCCTGGCTTTGAAGTGTTAC CTCTCATCTGTGGATCAACCTGGGGAGTACGTATTGAATTCAATACGATT GATGAGAAGTGCGTGAAGGTTCAAATGAGAATAATTCCTGATCGATTCTC GAGGATTACTTTTGTTTTTGAGTGGGCACGGTGGATACATAACTTTGAAG CATGGATGAAGGTATTGACATGCGAGTATGATGAGGAGGATCTTTCTGAA GTTGAGAAAAGCCTCAGTGAATCCTCATTCGAAAACAGTGTTGGCGCAAT TAGGGCCAATGGAGACAATGTTTCGGGGGCTACCCATGTTTCGGTTGAGG GTGGGGAAAAAAACGACATCGGTGTTAGTTATTCAAGGAACGAGAGCATG GAAGATATGGCAGATCATGACCCAACCTCCAATTCGTTTGCAAGCGCTGG AAGTGATCTTGATGTCGATGTTACTTTGAATAACGAGGAGGAAGAAGCCG AGCACCAGGAGGACAGAATTGCCGCAGAAGAAAACAATGGCGATGATGTG CGCGTGGATTGCACATGCGACGgcaaatacagactcaacactaaggctaa gcgggtttttgttacggacagattcggtacgaagaagtacttctgggaat gggaagtatggagACCACAGCGAGCATTCGAGAAACATAGGTATCCCATT CTGCACGACCTGCAAACCACCATGGTGACATGCAGGGGCCTCGGAAAAGA AACGGACGAGCAAAAATTTGCAGATGAATGCGGCTCTGCTGTTGCCGACG ACGGCCTCAGAGGCAACGATTCATTTGCCAACGCAGATGAGCATGTGTAG back to top
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