Gcaud3521.t1 (mRNA) Gracilaria caudata M_176_S67 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGcaud3521.t1
Unique NameGcaud3521.t1
TypemRNA
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length1063
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_25_length_75543_cov_4.432116contigNODE_25_length_75543_cov_4.432116:44948..48465 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog45157.CMN325CT
Preferred nameABCB1
PFAMsABC_membrane,ABC_tran
Max annot lvl2759|Eukaryota
KEGG koko:K05657
KEGG TC3.A.1.201
KEGG Pathwayko02010,map02010
Evalue8.85e-151
EggNOG OGsCOG1132@1|root,KOG0058@2759|Eukaryota
DescriptionATPase activity, coupled to transmembrane movement of substances
COG categoryV
BRITEko00000,ko00001,ko02000
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3521Gcaud3521Gracilaria caudata M_176_S67 malegeneNODE_25_length_75543_cov_4.432116 44948..48465 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gcaud3521.t1Gcaud3521.t1Gracilaria caudata M_176_S67 malepolypeptideNODE_25_length_75543_cov_4.432116 44948..48465 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gcaud3521.t1.start1Gcaud3521.t1.start1Gracilaria caudata M_176_S67 malestart_codonNODE_25_length_75543_cov_4.432116 44948..44950 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gcaud3521.t1.CDS1Gcaud3521.t1.CDS1Gracilaria caudata M_176_S67 maleCDSNODE_25_length_75543_cov_4.432116 44948..45977 +
Gcaud3521.t1.CDS2Gcaud3521.t1.CDS2Gracilaria caudata M_176_S67 maleCDSNODE_25_length_75543_cov_4.432116 46176..48303 +
Gcaud3521.t1.CDS3Gcaud3521.t1.CDS3Gracilaria caudata M_176_S67 maleCDSNODE_25_length_75543_cov_4.432116 48435..48465 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gcaud3521.t1.exon1Gcaud3521.t1.exon1Gracilaria caudata M_176_S67 maleexonNODE_25_length_75543_cov_4.432116 44948..45977 +
Gcaud3521.t1.exon2Gcaud3521.t1.exon2Gracilaria caudata M_176_S67 maleexonNODE_25_length_75543_cov_4.432116 46176..48303 +
Gcaud3521.t1.exon3Gcaud3521.t1.exon3Gracilaria caudata M_176_S67 maleexonNODE_25_length_75543_cov_4.432116 48435..48465 +


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gcaud3521.t1.intron1Gcaud3521.t1.intron1Gracilaria caudata M_176_S67 maleintronNODE_25_length_75543_cov_4.432116 45978..46175 +
Gcaud3521.t1.intron2Gcaud3521.t1.intron2Gracilaria caudata M_176_S67 maleintronNODE_25_length_75543_cov_4.432116 48304..48434 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gcaud3521.t1.stop1Gcaud3521.t1.stop1Gracilaria caudata M_176_S67 malestop_codonNODE_25_length_75543_cov_4.432116 48463..48465 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gcaud3521.t1 ID=Gcaud3521.t1|Name=Gcaud3521.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=1063bp
MSQPTKFDPPDSVVAPAFRELFDRLRRAQMSNKKKGEITAEERKAFEYGV
AERQKVLGHSLFLVFAQWAIYRQAISRIKSRAIRLTYAMGAVVSTSWYVQ
RRAAKVSKDTFAHIVTTNMDSALGNEARIILAELEGPEGPYFRKVCQERE
FVTDFGSIPMDDEHHDLHPQLRLKPRLLVEVSPHPQIPVMRRERPEKGVR
SRSDSQDWRSMPPQTGSVRGMGAKNRSERQQTINHRAIEATASEFEAPEE
VEASMKDLFTGSEELERIRKVERARDRKNAAGNFGADGANGDLWGKPFDF
SKAAREKEQVVDFDPSTGIHGFPDDDQQPMTPSQRRAAERRLRLKPLWSI
CTNVSQALAYFKAVFDLVVLLEFGMHRFIPSLRTAIALHASKRSSTVILH
PNFYDSTNFHIRRFSSTASSKPLPLLSRLQRLVSSATQNLNGSSTSTDNP
EQRLEISRLISLARPEKGLIGFALSAQLLSASSMMLFPFALGRVVDAVTG
TGPTDLDTLVLAMGGVFTVSALASATRVAAMSLAGSRISRQLRVSLFHAI
LRQETAFFDSRQSGELVNRLSSDVPLVSRTLTENLAKILRNGVTTASSLT
FILYLSPKLSLVTICSMPPIVGFAFMFGRNARKLSRQLVDALAAATQVAA
ERTSAIRTVRTFGAEGFESSRYSKQVDETYSLSKKVAIADALYSGSVQFA
AQMSLVGVLWFGGRMVVNPLDPMTIGTLTSFAMYAVNLGVSVSAMGTSYG
QLLRALGAGYRIFEILDRSPEGRSSTIADQELPANNYQEPLDQESKPDVN
GLESGYDATVRFNNVHFSYPTHPNVAVLKGVNLVIRPGEIVAIAGGSGSG
KSTLGALLSRLYEPTSGDVRLGNTSISKLDTAWLRNQIAVVSQEPVLFDG
TVADNISYAMTKKPCMDHVRDAAKTAASHEMIMTLPKQYDTRVGERGSAL
SGGQRARTALSRAMARRPRVLVLDEHSAALDAESERAVGEALTNAATDLN
MAVLTIAHRTSSLRRANRVAVLAEGRIAELESYEKLMSNPKSLLRRMLVP
EIPLEIRRLQTM*
back to top

spliced messenger RNA

>Gcaud3521.t1 ID=Gcaud3521.t1|Name=Gcaud3521.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=3189bp|location=Sequence derived from alignment at NODE_25_length_75543_cov_4.432116:44948..48465+ (Gracilaria caudata M_176_S67 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAGTCAACCGACCAAATTCGACCCACCAGACTCTGTAGTGGCGCCGGC
TTTTAGGGAGTTATTCGATCGTCTCCGACGAGCACAAATGAGCAACAAGA
AAAAGGGAGAAATCACTGCGGAAGAACGTAAGGCATTCGAGTACGGTGTG
GCTGAAAGGCAAAAGGTGTTGGGACATTCTTTGTTCCTAGTCTTTGCGCA
ATGGGCAATATACAGACAAGCCATTTCTCGAATCAAGTCACGAGCAATTA
GACTAACCTACGCGATGGGGGCGGTGGTTTCAACGTCGTGGTATGTACAA
CGTCGTGCTGCAAAAGTCTCAAAAGATACTTTCGCCCATATTGTCACCAC
TAACATGGACAGTGCGCTCGGGAACGAGGCGCGCATCATATTGGCAGAAC
TTGAAGGGCCGGAAGGACCCTACTTCCGTAAGGTATGTCAGGAGCGCGAG
TTTGTGACTGATTTCGGTTCTATCCCGATGGATGATGAGCATCACGACCT
ACACCCCCAACTAAGGCTGAAACCAAGACTGCTGGTGGAAGTCTCTCCAC
ATCCGCAGATACCAGTGATGCGACGCGAACGTCCCGAGAAGGGAGTTCGA
TCTAGAAGTGATAGTCAGGACTGGCGATCGATGCCGCCCCAGACGGGTAG
TGTGCGCGGAATGGGAGCGAAAAATCGATCTGAGAGACAACAAACAATTA
ATCACAGAGCAATAGAGGCGACTGCAAGTGAATTTGAAGCTCCAGAAGAA
GTTGAGGCCTCTATGAAGGACTTGTTTACTGGCAGTGAAGAGTTAGAACG
CATTAGAAAAGTTGAAAGAGCGCGGGATAGGAAGAACGCAGCGGGTAATT
TTGGTGCTGACGGTGCTAACGGCGACTTGTGGGGGAAGCCATTTGACTTC
TCCAAGGCTGCCAGGGAAAAGGAACAAGTTGTTGACTTTGACCCATCAAC
GGGTATCCATGGTTTCCCAGATGATGATCAGCAACCGATGACACCTTCCC
AAAGAAGAGCAGCTGAAAGGCGTCTAAGACTGAAACCGTTGTGGTCAATC
TGCACCAATGTCTCCCAAGCTCTTGCGTACTTCAAGGCTGTTTTCGACCT
GGTTGTCCTCTTAGAGTTTGGGATGCATCGCTTCATCCCGTCACTGCGAA
CAGCTATAGCGCTTCACGCATCTAAGCGATCATCAACCGTAATTTTGCAT
CCTAACTTTTACGATTCGACTAACTTTCACATTCGCCGCTTTTCATCTAC
AGCATCCTCTAAGCCACTTCCCTTACTCTCACGCCTTCAGAGACTCGTCT
CCTCTGCCACTCAAAATCTCAATGGATCCTCGACATCGACAGATAATCCA
GAGCAACGGTTGGAGATATCACGCTTGATTAGCCTTGCTCGTCCCGAGAA
AGGGCTTATTGGCTTTGCACTCTCCGCCCAGCTTCTTTCCGCGTCATCCA
TGATGCTCTTTCCCTTCGCTCTCGGTCGAGTTGTGGATGCTGTTACCGGC
ACTGGTCCTACAGACCTAGACACTCTTGTGCTTGCCATGGGTGGTGTTTT
CACTGTCTCTGCGCTGGCGTCAGCTACTAGAGTGGCCGCCATGTCGCTCG
CTGGTTCAAGAATTTCACGGCAACTGCGTGTCTCACTGTTCCATGCAATT
TTGCGACAAGAAACTGCCTTCTTCGACAGTCGACAATCTGGCGAGCTAGT
CAATCGCCTATCCTCCGATGTCCCACTGGTGTCACGAACATTAACAGAAA
ACTTAGCGAAGATTCTAAGAAACGGGGTGACTACCGCGTCATCCTTGACC
TTCATTTTGTATCTGTCGCCCAAGCTATCGCTTGTTACAATCTGTTCTAT
GCCGCCGATTGTCGGCTTCGCCTTTATGTTTGGTCGTAATGCTCGGAAAC
TGTCTCGGCAACTTGTCGATGCTCTTGCAGCTGCTACTCAGGTTGCTGCC
GAACGCACTAGCGCGATCCGGACCGTCAGGACGTTTGGAGCTGAAGGATT
CGAGTCGAGTAGATATTCGAAGCAAGTGGATGAAACGTACAGTCTTTCAA
AGAAGGTTGCGATTGCTGACGCTCTTTACTCGGGTTCAGTCCAATTCGCC
GCCCAGATGTCCCTCGTTGGTGTCTTATGGTTTGGTGGACGAATGGTTGT
CAACCCTCTGGATCCAATGACCATTGGCACACTAACGTCTTTCGCTATGT
ACGCAGTCAACCTGGGTGTTTCTGTTTCGGCGATGGGGACTTCATACGGA
CAGCTCTTGCGGGCCTTAGGGGCTGGTTACAGAATCTTTGAAATCCTAGA
CCGTAGTCCAGAAGGTAGGTCTTCAACAATTGCAGATCAAGAACTTCCGG
CAAATAATTATCAGGAGCCGTTGGATCAAGAATCTAAGCCGGATGTGAAT
GGCTTAGAATCAGGATATGACGCCACCGTTCGCTTTAATAACGTTCATTT
TTCCTACCCCACCCATCCGAACGTAGCAGTCCTCAAAGGGGTCAACCTTG
TAATCCGACCTGGAGAAATAGTTGCTATTGCTGGGGGGAGCGGATCTGGA
AAGAGCACTTTAGGAGCCCTTCTCTCTCGCCTGTACGAACCCACTTCGGG
AGACGTGAGACTAGGGAACACGTCCATTTCAAAACTTGACACAGCTTGGC
TTCGAAACCAGATTGCAGTCGTTTCTCAGGAGCCGGTACTATTTGACGGC
ACTGTTGCTGATAACATTAGTTATGCGATGACCAAAAAGCCATGTATGGA
TCACGTGCGAGACGCAGCGAAGACTGCCGCCAGCCACGAAATGATCATGA
CCCTTCCGAAGCAATACGACACCAGAGTCGGTGAACGGGGATCAGCACTG
TCTGGTGGTCAGCGCGCTCGAACTGCACTTTCTCGTGCAATGGCGCGACG
GCCGCGAGTACTCGTGCTAGACGAACATAGCGCTGCCCTTGATGCAGAGT
CTGAGCGTGCCGTGGGTGAGGCCCTGACCAACGCCGCCACTGATCTCAAT
ATGGCAGTCCTGACCATCGCACATCGAACTAGCTCTCTGCGTCGTGCAAA
CAGAGTTGCAGTGCTGGCGGAAGGGAGGATAGCCGAGCTGGAATCATACG
AAAAGCTCATGAGCAATCCCAAATCACTTCTCCGTCGGATGCTGGTACCT
GAGATTCCCCTGGAGATCAGAAGGCTTCAAACAATGTGA
back to top

protein sequence of Gcaud3521.t1

>Gcaud3521.t1 ID=Gcaud3521.t1|Name=Gcaud3521.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=1063bp
MSQPTKFDPPDSVVAPAFRELFDRLRRAQMSNKKKGEITAEERKAFEYGV
AERQKVLGHSLFLVFAQWAIYRQAISRIKSRAIRLTYAMGAVVSTSWYVQ
RRAAKVSKDTFAHIVTTNMDSALGNEARIILAELEGPEGPYFRKVCQERE
FVTDFGSIPMDDEHHDLHPQLRLKPRLLVEVSPHPQIPVMRRERPEKGVR
SRSDSQDWRSMPPQTGSVRGMGAKNRSERQQTINHRAIEATASEFEAPEE
VEASMKDLFTGSEELERIRKVERARDRKNAAGNFGADGANGDLWGKPFDF
SKAAREKEQVVDFDPSTGIHGFPDDDQQPMTPSQRRAAERRLRLKPLWSI
CTNVSQALAYFKAVFDLVVLLEFGMHRFIPSLRTAIALHASKRSSTVILH
PNFYDSTNFHIRRFSSTASSKPLPLLSRLQRLVSSATQNLNGSSTSTDNP
EQRLEISRLISLARPEKGLIGFALSAQLLSASSMMLFPFALGRVVDAVTG
TGPTDLDTLVLAMGGVFTVSALASATRVAAMSLAGSRISRQLRVSLFHAI
LRQETAFFDSRQSGELVNRLSSDVPLVSRTLTENLAKILRNGVTTASSLT
FILYLSPKLSLVTICSMPPIVGFAFMFGRNARKLSRQLVDALAAATQVAA
ERTSAIRTVRTFGAEGFESSRYSKQVDETYSLSKKVAIADALYSGSVQFA
AQMSLVGVLWFGGRMVVNPLDPMTIGTLTSFAMYAVNLGVSVSAMGTSYG
QLLRALGAGYRIFEILDRSPEGRSSTIADQELPANNYQEPLDQESKPDVN
GLESGYDATVRFNNVHFSYPTHPNVAVLKGVNLVIRPGEIVAIAGGSGSG
KSTLGALLSRLYEPTSGDVRLGNTSISKLDTAWLRNQIAVVSQEPVLFDG
TVADNISYAMTKKPCMDHVRDAAKTAASHEMIMTLPKQYDTRVGERGSAL
SGGQRARTALSRAMARRPRVLVLDEHSAALDAESERAVGEALTNAATDLN
MAVLTIAHRTSSLRRANRVAVLAEGRIAELESYEKLMSNPKSLLRRMLVP
EIPLEIRRLQTM*
back to top

mRNA from alignment at NODE_25_length_75543_cov_4.432116:44948..48465+

Legend: polypeptidestart_codonCDSexonintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gcaud3521.t1 ID=Gcaud3521.t1|Name=Gcaud3521.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=3518bp|location=Sequence derived from alignment at NODE_25_length_75543_cov_4.432116:44948..48465+ (Gracilaria caudata M_176_S67 male)
ATGAGTCAACCGACCAAATTCGACCCACCAGACTCTGTAGTGGCGCCGGC TTTTAGGGAGTTATTCGATCGTCTCCGACGAGCACAAATGAGCAACAAGA AAAAGGGAGAAATCACTGCGGAAGAACGTAAGGCATTCGAGTACGGTGTG GCTGAAAGGCAAAAGGTGTTGGGACATTCTTTGTTCCTAGTCTTTGCGCA ATGGGCAATATACAGACAAGCCATTTCTCGAATCAAGTCACGAGCAATTA GACTAACCTACGCGATGGGGGCGGTGGTTTCAACGTCGTGGTATGTACAA CGTCGTGCTGCAAAAGTCTCAAAAGATACTTTCGCCCATATTGTCACCAC TAACATGGACAGTGCGCTCGGGAACGAGGCGCGCATCATATTGGCAGAAC TTGAAGGGCCGGAAGGACCCTACTTCCGTAAGGTATGTCAGGAGCGCGAG TTTGTGACTGATTTCGGTTCTATCCCGATGGATGATGAGCATCACGACCT ACACCCCCAACTAAGGCTGAAACCAAGACTGCTGGTGGAAGTCTCTCCAC ATCCGCAGATACCAGTGATGCGACGCGAACGTCCCGAGAAGGGAGTTCGA TCTAGAAGTGATAGTCAGGACTGGCGATCGATGCCGCCCCAGACGGGTAG TGTGCGCGGAATGGGAGCGAAAAATCGATCTGAGAGACAACAAACAATTA ATCACAGAGCAATAGAGGCGACTGCAAGTGAATTTGAAGCTCCAGAAGAA GTTGAGGCCTCTATGAAGGACTTGTTTACTGGCAGTGAAGAGTTAGAACG CATTAGAAAAGTTGAAAGAGCGCGGGATAGGAAGAACGCAGCGGGTAATT TTGGTGCTGACGGTGCTAACGGCGACTTGTGGGGGAAGCCATTTGACTTC TCCAAGGCTGCCAGGGAAAAGGAACAAGTTGTTGACTTTGACCCATCAAC GGGTATCCATGGTTTCCCAGATGATGATCAGCAACCGATGACACCTTCCC AAAGAAGAGCAGCTGAAAGGCGTCTAAGACGTCTTAAAGCTCAAGCGCGG GCACAACAGAAAGCAAACGATGAATAGCGTGTCGCGATAGCCAACGCAAC ATTGGGTACGTAGCAAAGATGCGGCGGACGGTTTCGCGGAATTGGCCCTT AATTTTAGTTTAGTGCCGCTCACGTGTGCTCCCAAGGGTTTAGCGTCCAC ATACGTAAACTTGTATACTGCTGCGTAGTGAAACCGTTGTGGTCAATCTG CACCAATGTCTCCCAAGCTCTTGCGTACTTCAAGGCTGTTTTCGACCTGG TTGTCCTCTTAGAGTTTGGGATGCATCGCTTCATCCCGTCACTGCGAACA GCTATAGCGCTTCACGCATCTAAGCGATCATCAACCGTAATTTTGCATCC TAACTTTTACGATTCGACTAACTTTCACATTCGCCGCTTTTCATCTACAG CATCCTCTAAGCCACTTCCCTTACTCTCACGCCTTCAGAGACTCGTCTCC TCTGCCACTCAAAATCTCAATGGATCCTCGACATCGACAGATAATCCAGA GCAACGGTTGGAGATATCACGCTTGATTAGCCTTGCTCGTCCCGAGAAAG GGCTTATTGGCTTTGCACTCTCCGCCCAGCTTCTTTCCGCGTCATCCATG ATGCTCTTTCCCTTCGCTCTCGGTCGAGTTGTGGATGCTGTTACCGGCAC TGGTCCTACAGACCTAGACACTCTTGTGCTTGCCATGGGTGGTGTTTTCA CTGTCTCTGCGCTGGCGTCAGCTACTAGAGTGGCCGCCATGTCGCTCGCT GGTTCAAGAATTTCACGGCAACTGCGTGTCTCACTGTTCCATGCAATTTT GCGACAAGAAACTGCCTTCTTCGACAGTCGACAATCTGGCGAGCTAGTCA ATCGCCTATCCTCCGATGTCCCACTGGTGTCACGAACATTAACAGAAAAC TTAGCGAAGATTCTAAGAAACGGGGTGACTACCGCGTCATCCTTGACCTT CATTTTGTATCTGTCGCCCAAGCTATCGCTTGTTACAATCTGTTCTATGC CGCCGATTGTCGGCTTCGCCTTTATGTTTGGTCGTAATGCTCGGAAACTG TCTCGGCAACTTGTCGATGCTCTTGCAGCTGCTACTCAGGTTGCTGCCGA ACGCACTAGCGCGATCCGGACCGTCAGGACGTTTGGAGCTGAAGGATTCG AGTCGAGTAGATATTCGAAGCAAGTGGATGAAACGTACAGTCTTTCAAAG AAGGTTGCGATTGCTGACGCTCTTTACTCGGGTTCAGTCCAATTCGCCGC CCAGATGTCCCTCGTTGGTGTCTTATGGTTTGGTGGACGAATGGTTGTCA ACCCTCTGGATCCAATGACCATTGGCACACTAACGTCTTTCGCTATGTAC GCAGTCAACCTGGGTGTTTCTGTTTCGGCGATGGGGACTTCATACGGACA GCTCTTGCGGGCCTTAGGGGCTGGTTACAGAATCTTTGAAATCCTAGACC GTAGTCCAGAAGGTAGGTCTTCAACAATTGCAGATCAAGAACTTCCGGCA AATAATTATCAGGAGCCGTTGGATCAAGAATCTAAGCCGGATGTGAATGG CTTAGAATCAGGATATGACGCCACCGTTCGCTTTAATAACGTTCATTTTT CCTACCCCACCCATCCGAACGTAGCAGTCCTCAAAGGGGTCAACCTTGTA ATCCGACCTGGAGAAATAGTTGCTATTGCTGGGGGGAGCGGATCTGGAAA GAGCACTTTAGGAGCCCTTCTCTCTCGCCTGTACGAACCCACTTCGGGAG ACGTGAGACTAGGGAACACGTCCATTTCAAAACTTGACACAGCTTGGCTT CGAAACCAGATTGCAGTCGTTTCTCAGGAGCCGGTACTATTTGACGGCAC TGTTGCTGATAACATTAGTTATGCGATGACCAAAAAGCCATGTATGGATC ACGTGCGAGACGCAGCGAAGACTGCCGCCAGCCACGAAATGATCATGACC CTTCCGAAGCAATACGACACCAGAGTCGGTGAACGGGGATCAGCACTGTC TGGTGGTCAGCGCGCTCGAACTGCACTTTCTCGTGCAATGGCGCGACGGC CGCGAGTACTCGTGCTAGACGAACATAGCGCTGCCCTTGATGCAGAGTCT GAGCGTGCCGTGGGTGAGGCCCTGACCAACGCCGCCACTGATCTCAATAT GGCAGTCCTGACCATCGCACATCGAACTAGCTCTCTGCGTCGTGCAAACA GAGTTGCAGTGCTGGCGGAAGGGAGGATAGCCGAGCTGGAATCATACGAA AAGCTCATGAGCAATCCCAAATCACTTCTCCGTCGGATGCTGGTACCTGA GATTCCGTGAAAAGCTGGTTAAGAACCGACGGTACTGTGCGATTAAAGCT CATATGCAGAGTTACATACATATCTAAGAATGCTTATGTTCTTGACGTCT TTTCTCCTTCACGACTCTCTCTTGATCCGAAACAAAGCCTGGAGATCAGA AGGCTTCAAACAATGTGA
back to top

Coding sequence (CDS) from alignment at NODE_25_length_75543_cov_4.432116:44948..48465+

>Gcaud3521.t1 ID=Gcaud3521.t1|Name=Gcaud3521.t1|organism=Gracilaria caudata M_176_S67 male|type=CDS|length=3189bp|location=Sequence derived from alignment at NODE_25_length_75543_cov_4.432116:44948..48465+ (Gracilaria caudata M_176_S67 male)
ATGAGTCAACCGACCAAATTCGACCCACCAGACTCTGTAGTGGCGCCGGC
TTTTAGGGAGTTATTCGATCGTCTCCGACGAGCACAAATGAGCAACAAGA
AAAAGGGAGAAATCACTGCGGAAGAACGTAAGGCATTCGAGTACGGTGTG
GCTGAAAGGCAAAAGGTGTTGGGACATTCTTTGTTCCTAGTCTTTGCGCA
ATGGGCAATATACAGACAAGCCATTTCTCGAATCAAGTCACGAGCAATTA
GACTAACCTACGCGATGGGGGCGGTGGTTTCAACGTCGTGGTATGTACAA
CGTCGTGCTGCAAAAGTCTCAAAAGATACTTTCGCCCATATTGTCACCAC
TAACATGGACAGTGCGCTCGGGAACGAGGCGCGCATCATATTGGCAGAAC
TTGAAGGGCCGGAAGGACCCTACTTCCGTAAGGTATGTCAGGAGCGCGAG
TTTGTGACTGATTTCGGTTCTATCCCGATGGATGATGAGCATCACGACCT
ACACCCCCAACTAAGGCTGAAACCAAGACTGCTGGTGGAAGTCTCTCCAC
ATCCGCAGATACCAGTGATGCGACGCGAACGTCCCGAGAAGGGAGTTCGA
TCTAGAAGTGATAGTCAGGACTGGCGATCGATGCCGCCCCAGACGGGTAG
TGTGCGCGGAATGGGAGCGAAAAATCGATCTGAGAGACAACAAACAATTA
ATCACAGAGCAATAGAGGCGACTGCAAGTGAATTTGAAGCTCCAGAAGAA
GTTGAGGCCTCTATGAAGGACTTGTTTACTGGCAGTGAAGAGTTAGAACG
CATTAGAAAAGTTGAAAGAGCGCGGGATAGGAAGAACGCAGCGGGTAATT
TTGGTGCTGACGGTGCTAACGGCGACTTGTGGGGGAAGCCATTTGACTTC
TCCAAGGCTGCCAGGGAAAAGGAACAAGTTGTTGACTTTGACCCATCAAC
GGGTATCCATGGTTTCCCAGATGATGATCAGCAACCGATGACACCTTCCC
AAAGAAGAGCAGCTGAAAGGCGTCTAAGACTGAAACCGTTGTGGTCAATC
TGCACCAATGTCTCCCAAGCTCTTGCGTACTTCAAGGCTGTTTTCGACCT
GGTTGTCCTCTTAGAGTTTGGGATGCATCGCTTCATCCCGTCACTGCGAA
CAGCTATAGCGCTTCACGCATCTAAGCGATCATCAACCGTAATTTTGCAT
CCTAACTTTTACGATTCGACTAACTTTCACATTCGCCGCTTTTCATCTAC
AGCATCCTCTAAGCCACTTCCCTTACTCTCACGCCTTCAGAGACTCGTCT
CCTCTGCCACTCAAAATCTCAATGGATCCTCGACATCGACAGATAATCCA
GAGCAACGGTTGGAGATATCACGCTTGATTAGCCTTGCTCGTCCCGAGAA
AGGGCTTATTGGCTTTGCACTCTCCGCCCAGCTTCTTTCCGCGTCATCCA
TGATGCTCTTTCCCTTCGCTCTCGGTCGAGTTGTGGATGCTGTTACCGGC
ACTGGTCCTACAGACCTAGACACTCTTGTGCTTGCCATGGGTGGTGTTTT
CACTGTCTCTGCGCTGGCGTCAGCTACTAGAGTGGCCGCCATGTCGCTCG
CTGGTTCAAGAATTTCACGGCAACTGCGTGTCTCACTGTTCCATGCAATT
TTGCGACAAGAAACTGCCTTCTTCGACAGTCGACAATCTGGCGAGCTAGT
CAATCGCCTATCCTCCGATGTCCCACTGGTGTCACGAACATTAACAGAAA
ACTTAGCGAAGATTCTAAGAAACGGGGTGACTACCGCGTCATCCTTGACC
TTCATTTTGTATCTGTCGCCCAAGCTATCGCTTGTTACAATCTGTTCTAT
GCCGCCGATTGTCGGCTTCGCCTTTATGTTTGGTCGTAATGCTCGGAAAC
TGTCTCGGCAACTTGTCGATGCTCTTGCAGCTGCTACTCAGGTTGCTGCC
GAACGCACTAGCGCGATCCGGACCGTCAGGACGTTTGGAGCTGAAGGATT
CGAGTCGAGTAGATATTCGAAGCAAGTGGATGAAACGTACAGTCTTTCAA
AGAAGGTTGCGATTGCTGACGCTCTTTACTCGGGTTCAGTCCAATTCGCC
GCCCAGATGTCCCTCGTTGGTGTCTTATGGTTTGGTGGACGAATGGTTGT
CAACCCTCTGGATCCAATGACCATTGGCACACTAACGTCTTTCGCTATGT
ACGCAGTCAACCTGGGTGTTTCTGTTTCGGCGATGGGGACTTCATACGGA
CAGCTCTTGCGGGCCTTAGGGGCTGGTTACAGAATCTTTGAAATCCTAGA
CCGTAGTCCAGAAGGTAGGTCTTCAACAATTGCAGATCAAGAACTTCCGG
CAAATAATTATCAGGAGCCGTTGGATCAAGAATCTAAGCCGGATGTGAAT
GGCTTAGAATCAGGATATGACGCCACCGTTCGCTTTAATAACGTTCATTT
TTCCTACCCCACCCATCCGAACGTAGCAGTCCTCAAAGGGGTCAACCTTG
TAATCCGACCTGGAGAAATAGTTGCTATTGCTGGGGGGAGCGGATCTGGA
AAGAGCACTTTAGGAGCCCTTCTCTCTCGCCTGTACGAACCCACTTCGGG
AGACGTGAGACTAGGGAACACGTCCATTTCAAAACTTGACACAGCTTGGC
TTCGAAACCAGATTGCAGTCGTTTCTCAGGAGCCGGTACTATTTGACGGC
ACTGTTGCTGATAACATTAGTTATGCGATGACCAAAAAGCCATGTATGGA
TCACGTGCGAGACGCAGCGAAGACTGCCGCCAGCCACGAAATGATCATGA
CCCTTCCGAAGCAATACGACACCAGAGTCGGTGAACGGGGATCAGCACTG
TCTGGTGGTCAGCGCGCTCGAACTGCACTTTCTCGTGCAATGGCGCGACG
GCCGCGAGTACTCGTGCTAGACGAACATAGCGCTGCCCTTGATGCAGAGT
CTGAGCGTGCCGTGGGTGAGGCCCTGACCAACGCCGCCACTGATCTCAAT
ATGGCAGTCCTGACCATCGCACATCGAACTAGCTCTCTGCGTCGTGCAAA
CAGAGTTGCAGTGCTGGCGGAAGGGAGGATAGCCGAGCTGGAATCATACG
AAAAGCTCATGAGCAATCCCAAATCACTTCTCCGTCGGATGCTGGTACCT
GAGATTCCCCTGGAGATCAGAAGGCTTCAAACAATGTGA
back to top