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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 130081.XP_005703958.1 |
| Preferred name | srk1 |
| PFAMs | Pkinase |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K08286,ko:K08794 |
| KEGG Pathway | ko04921,ko04925,map04921,map04925 |
| GOs | GO:0000166,GO:0000935,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004683,GO:0005488,GO:0005515,GO:0005516,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005938,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006970,GO:0006979,GO:0007154,GO:0007165,GO:0007231,GO:0007346,GO:0008144,GO:0008150,GO:0008152,GO:0009628,GO:0009987,GO:0010389,GO:0010515,GO:0010564,GO:0010948,GO:0010972,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0018105,GO:0018107,GO:0018193,GO:0018209,GO:0018210,GO:0019538,GO:0023052,GO:0030428,GO:0030554,GO:0031135,GO:0031137,GO:0031138,GO:0031647,GO:0031974,GO:0031981,GO:0032092,GO:0032153,GO:0032155,GO:0032553,GO:0032555,GO:0032559,GO:0032879,GO:0032880,GO:0033043,GO:0033554,GO:0034399,GO:0034599,GO:0035556,GO:0035639,GO:0036094,GO:0036211,GO:0040020,GO:0042221,GO:0042763,GO:0042764,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043393,GO:0043412,GO:0043900,GO:0043901,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044448,GO:0044464,GO:0045786,GO:0045930,GO:0046999,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050821,GO:0050896,GO:0051098,GO:0051099,GO:0051128,GO:0051285,GO:0051286,GO:0051445,GO:0051716,GO:0051726,GO:0051783,GO:0060341,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070887,GO:0071214,GO:0071470,GO:0071704,GO:0071944,GO:0072324,GO:0097159,GO:0097367,GO:0099568,GO:0099738,GO:0104004,GO:0140096,GO:1900180,GO:1900181,GO:1901265,GO:1901363,GO:1901564,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902749,GO:1902750,GO:1903827,GO:1903828,GO:2000241,GO:2000242 |
| Evalue | 1e-97 |
| EggNOG OGs | KOG0032@1|root,KOG0032@2759|Eukaryota |
| EC | 2.7.11.17 |
| Description | protein serine/threonine kinase activity |
| COG category | T |
| BRITE | ko00000,ko00001,ko01000,ko01001 |
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Gcaud3410.t1.start1 | Gcaud3410.t1.start1 | Gracilaria caudata M_176_S67 male | start_codon | NODE_2034_length_7137_cov_4.467357 13..15 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Gcaud3410.t1.stop1 | Gcaud3410.t1.stop1 | Gracilaria caudata M_176_S67 male | stop_codon | NODE_2034_length_7137_cov_4.467357 2107..2109 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gcaud3410.t1 ID=Gcaud3410.t1|Name=Gcaud3410.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=699bp MAASPPTARARARDVDARLLLAHHARATSPLRYTAVEPVCIEGWLAKEGR SIRTRRNRYFTLNGTVLASHRAKSAAPSWHVSVADALVQRGMLPREIRIS LPGRALSFIAPTQPAFEMWIVALRRASLASTRVDEYYSIGSLIGEGMNGQ VRLAHDKMTDEPVAIKMVPRLGRQNEAHFLAREVQIILSISHPNIVRTID VFVRTRRIHFVMEYLAGGELFDFISQNTHFTETHAAAVMTDLLNALHYLH SRNIVHRDVKLENLLCANTTWPLNVKLADFGFANYLHADNRPSLHSFVGT PYYIAPEMLRGDPHGCPVDVWASGVVMYILLSGKFPFGGNNESEYYQRVL AKNAYFPSEEWANVSEDAKSLVRGMLCKDPRKRLTVEQCLAHPWLARAQP VLNTTEPPLSTPEPLVTSEPNLRTATALKHNRTKRGKWRYLAMLNRSLSG APEAIMPDQLQADYARAKHTLSESATVPCTRSPPSDCASNSVAATDTDLV NRRPSLIRRILSSQKLSLDRFERECAPPRGCAEDKVDEASANPRKTLSLF SKDGPLRRSFHRVSERATDDGINFVNSQSQRLPPKIARERQRQQKMAQAA MKRTSRAAGALGSCKLNSATFGMTNEGYHSSPRLATHLLEPLHGFVMPCS ASEGAASGGARSERMAIVDEHGDEVGSESRDDVLHGCYSRARAVPLGL* back to topspliced messenger RNA >Gcaud3410.t1 ID=Gcaud3410.t1|Name=Gcaud3410.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=2097bp|location=Sequence derived from alignment at NODE_2034_length_7137_cov_4.467357:13..2109+ (Gracilaria caudata M_176_S67 male)|Notes=Excludes all bases but those of type(s): exon.
ATGGCCGCCTCCCCGCCCACCGCCCGCGCGCGTGCGCGCGACGTCGATGC CCGTCTGCTACTGGCGCACCACGCCCGCGCCACCTCGCCGCTGCGCTACA CCGCCGTGGAGCCCGTGTGCATAGAGGGTTGGCTGGCCAAGGAGGGCCGC TCCATCCGCACCCGCCGCAATCGATACTTCACGCTCAACGGCACCGTGCT GGCGTCGCACCGCGCCAAGAGCGCTGCCCCCAGCTGGCATGTGTCCGTGG CCGATGCGCTGGTGCAGCGCGGCATGCTGCCCAGGGAAATCCGCATCTCG CTGCCCGGTCGCGCTTTGTCCTTTATCGCCCCGACGCAGCCGGCCTTCGA GATGTGGATCGTCGCCCTGCGCCGTGCCTCGCTAGCCAGCACCCGCGTCG ACGAGTACTACTCCATTGGCTCCCTCATTGGCGAGGGCATGAATGGTCAG GTGCGCCTGGCTCACGATAAGATGACGGACGAGCCCGTCGCCATCAAGAT GGTGCCGCGCTTGGGGCGCCAGAACGAGGCGCACTTTCTGGCCAGGGAGG TGCAGATCATTCTGTCCATCTCGCATCCGAACATCGTCCGCACCATCGAT GTGTTTGTGCGCACGCGTCGCATCCACTTCGTCATGGAATATCTCGCGGG CGGGGAACTTTTCGACTTCATCTCACAGAACACCCATTTCACAGAGACCC ATGCCGCCGCCGTCATGACCGACTTGCTCAACGCCTTGCACTACCTGCAT TCGCGAAATATTGTTCACCGCGACGTCAAATTGGAGAACTTGTTGTGCGC CAATACCACATGGCCTCTCAACGTCAAACTCGCCGATTTTGGTTTTGCGA ACTATCTGCACGCTGACAACCGCCCCTCGCTCCACAGTTTTGTCGGCACT CCGTACTACATTGCGCCTGAGATGCTACGGGGAGATCCGCACGGTTGTCC CGTTGACGTATGGGCCAGCGGTGTCGTCATGTATATCCTTCTAAGTGGCA AGTTTCCATTCGGTGGAAACAACGAGTCAGAATACTATCAACGTGTACTG GCAAAGAATGCGTACTTTCCTTCCGAAGAGTGGGCCAACGTTTCTGAGGA CGCCAAAAGCCTTGTCAGAGGTATGCTTTGTAAGGATCCGCGCAAGCGAC TCACTGTGGAACAGTGCTTGGCACACCCGTGGCTGGCGCGCGCTCAACCA GTGTTAAACACTACGGAACCACCCCTTTCCACGCCGGAACCGCTCGTAAC GTCCGAGCCTAATCTACGGACCGCCACAGCGCTGAAGCATAACCGTACCA AACGAGGCAAATGGCGCTATCTGGCCATGCTCAATCGCTCGCTTTCCGGC GCACCGGAGGCCATTATGCCCGACCAGCTGCAAGCCGATTATGCGCGAGC CAAACATACGCTGTCAGAATCTGCCACCGTGCCGTGCACGCGCTCTCCGC CTAGTGATTGCGCGAGTAACTCCGTGGCCGCCACGGACACCGATCTGGTC AATCGGCGGCCTAGTCTCATTCGTCGCATTCTATCATCGCAAAAGCTATC TTTGGACCGCTTCGAACGAGAGTGTGCGCCTCCGCGAGGCTGTGCAGAAG ACAAAGTGGATGAGGCTTCTGCGAACCCTAGAAAGACCTTGTCGTTGTTC TCAAAGGACGGGCCGTTGCGACGGTCGTTCCATCGAGTGAGCGAGCGCGC GACGGATGACGGAATCAACTTCGTCAACTCGCAATCGCAACGTCTACCGC CGAAAATCGCGAGGGAGAGACAACGGCAACAGAAAATGGCGCAAGCGGCG ATGAAACGCACGTCGAGAGCAGCGGGTGCTCTGGGAAGTTGTAAACTGAA CAGTGCCACGTTTGGCATGACGAATGAGGGGTATCATTCTTCTCCCAGAC TTGCGACGCATTTGTTGGAGCCGTTGCACGGTTTTGTGATGCCTTGCTCG GCATCGGAGGGCGCGGCGAGTGGTGGCGCGAGAAGTGAACGGATGGCGAT TGTTGATGAGCATGGCGATGAGGTGGGCAGCGAGAGTAGGGACGACGTTT TGCACGGCTGTTACTCGAGAGCACGCGCTGTGCCACTGGGATTGTAA back to topprotein sequence of Gcaud3410.t1 >Gcaud3410.t1 ID=Gcaud3410.t1|Name=Gcaud3410.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=699bp
MAASPPTARARARDVDARLLLAHHARATSPLRYTAVEPVCIEGWLAKEGR SIRTRRNRYFTLNGTVLASHRAKSAAPSWHVSVADALVQRGMLPREIRIS LPGRALSFIAPTQPAFEMWIVALRRASLASTRVDEYYSIGSLIGEGMNGQ VRLAHDKMTDEPVAIKMVPRLGRQNEAHFLAREVQIILSISHPNIVRTID VFVRTRRIHFVMEYLAGGELFDFISQNTHFTETHAAAVMTDLLNALHYLH SRNIVHRDVKLENLLCANTTWPLNVKLADFGFANYLHADNRPSLHSFVGT PYYIAPEMLRGDPHGCPVDVWASGVVMYILLSGKFPFGGNNESEYYQRVL AKNAYFPSEEWANVSEDAKSLVRGMLCKDPRKRLTVEQCLAHPWLARAQP VLNTTEPPLSTPEPLVTSEPNLRTATALKHNRTKRGKWRYLAMLNRSLSG APEAIMPDQLQADYARAKHTLSESATVPCTRSPPSDCASNSVAATDTDLV NRRPSLIRRILSSQKLSLDRFERECAPPRGCAEDKVDEASANPRKTLSLF SKDGPLRRSFHRVSERATDDGINFVNSQSQRLPPKIARERQRQQKMAQAA MKRTSRAAGALGSCKLNSATFGMTNEGYHSSPRLATHLLEPLHGFVMPCS ASEGAASGGARSERMAIVDEHGDEVGSESRDDVLHGCYSRARAVPLGL* back to topmRNA from alignment at NODE_2034_length_7137_cov_4.467357:13..2109+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gcaud3410.t1 ID=Gcaud3410.t1|Name=Gcaud3410.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=2097bp|location=Sequence derived from alignment at NODE_2034_length_7137_cov_4.467357:13..2109+ (Gracilaria caudata M_176_S67 male) ATGGCCGCCTCCCCGCCCACCGCCCGCGCGCGTGCGCGCGACGTCGATGC
CCGTCTGCTACTGGCGCACCACGCCCGCGCCACCTCGCCGCTGCGCTACA
CCGCCGTGGAGCCCGTGTGCATAGAGGGTTGGCTGGCCAAGGAGGGCCGC
TCCATCCGCACCCGCCGCAATCGATACTTCACGCTCAACGGCACCGTGCT
GGCGTCGCACCGCGCCAAGAGCGCTGCCCCCAGCTGGCATGTGTCCGTGG
CCGATGCGCTGGTGCAGCGCGGCATGCTGCCCAGGGAAATCCGCATCTCG
CTGCCCGGTCGCGCTTTGTCCTTTATCGCCCCGACGCAGCCGGCCTTCGA
GATGTGGATCGTCGCCCTGCGCCGTGCCTCGCTAGCCAGCACCCGCGTCG
ACGAGTACTACTCCATTGGCTCCCTCATTGGCGAGGGCATGAATGGTCAG
GTGCGCCTGGCTCACGATAAGATGACGGACGAGCCCGTCGCCATCAAGAT
GGTGCCGCGCTTGGGGCGCCAGAACGAGGCGCACTTTCTGGCCAGGGAGG
TGCAGATCATTCTGTCCATCTCGCATCCGAACATCGTCCGCACCATCGAT
GTGTTTGTGCGCACGCGTCGCATCCACTTCGTCATGGAATATCTCGCGGG
CGGGGAACTTTTCGACTTCATCTCACAGAACACCCATTTCACAGAGACCC
ATGCCGCCGCCGTCATGACCGACTTGCTCAACGCCTTGCACTACCTGCAT
TCGCGAAATATTGTTCACCGCGACGTCAAATTGGAGAACTTGTTGTGCGC
CAATACCACATGGCCTCTCAACGTCAAACTCGCCGATTTTGGTTTTGCGA
ACTATCTGCACGCTGACAACCGCCCCTCGCTCCACAGTTTTGTCGGCACT
CCGTACTACATTGCGCCTGAGATGCTACGGGGAGATCCGCACGGTTGTCC
CGTTGACGTATGGGCCAGCGGTGTCGTCATGTATATCCTTCTAAGTGGCA
AGTTTCCATTCGGTGGAAACAACGAGTCAGAATACTATCAACGTGTACTG
GCAAAGAATGCGTACTTTCCTTCCGAAGAGTGGGCCAACGTTTCTGAGGA
CGCCAAAAGCCTTGTCAGAGGTATGCTTTGTAAGGATCCGCGCAAGCGAC
TCACTGTGGAACAGTGCTTGGCACACCCGTGGCTGGCGCGCGCTCAACCA
GTGTTAAACACTACGGAACCACCCCTTTCCACGCCGGAACCGCTCGTAAC
GTCCGAGCCTAATCTACGGACCGCCACAGCGCTGAAGCATAACCGTACCA
AACGAGGCAAATGGCGCTATCTGGCCATGCTCAATCGCTCGCTTTCCGGC
GCACCGGAGGCCATTATGCCCGACCAGCTGCAAGCCGATTATGCGCGAGC
CAAACATACGCTGTCAGAATCTGCCACCGTGCCGTGCACGCGCTCTCCGC
CTAGTGATTGCGCGAGTAACTCCGTGGCCGCCACGGACACCGATCTGGTC
AATCGGCGGCCTAGTCTCATTCGTCGCATTCTATCATCGCAAAAGCTATC
TTTGGACCGCTTCGAACGAGAGTGTGCGCCTCCGCGAGGCTGTGCAGAAG
ACAAAGTGGATGAGGCTTCTGCGAACCCTAGAAAGACCTTGTCGTTGTTC
TCAAAGGACGGGCCGTTGCGACGGTCGTTCCATCGAGTGAGCGAGCGCGC
GACGGATGACGGAATCAACTTCGTCAACTCGCAATCGCAACGTCTACCGC
CGAAAATCGCGAGGGAGAGACAACGGCAACAGAAAATGGCGCAAGCGGCG
ATGAAACGCACGTCGAGAGCAGCGGGTGCTCTGGGAAGTTGTAAACTGAA
CAGTGCCACGTTTGGCATGACGAATGAGGGGTATCATTCTTCTCCCAGAC
TTGCGACGCATTTGTTGGAGCCGTTGCACGGTTTTGTGATGCCTTGCTCG
GCATCGGAGGGCGCGGCGAGTGGTGGCGCGAGAAGTGAACGGATGGCGAT
TGTTGATGAGCATGGCGATGAGGTGGGCAGCGAGAGTAGGGACGACGTTT
TGCACGGCTGTTACTCGAGAGCACGCGCTGTGCCACTGGGATTGTAA back to topCoding sequence (CDS) from alignment at NODE_2034_length_7137_cov_4.467357:13..2109+ >Gcaud3410.t1 ID=Gcaud3410.t1|Name=Gcaud3410.t1|organism=Gracilaria caudata M_176_S67 male|type=CDS|length=2097bp|location=Sequence derived from alignment at NODE_2034_length_7137_cov_4.467357:13..2109+ (Gracilaria caudata M_176_S67 male) ATGGCCGCCTCCCCGCCCACCGCCCGCGCGCGTGCGCGCGACGTCGATGC CCGTCTGCTACTGGCGCACCACGCCCGCGCCACCTCGCCGCTGCGCTACA CCGCCGTGGAGCCCGTGTGCATAGAGGGTTGGCTGGCCAAGGAGGGCCGC TCCATCCGCACCCGCCGCAATCGATACTTCACGCTCAACGGCACCGTGCT GGCGTCGCACCGCGCCAAGAGCGCTGCCCCCAGCTGGCATGTGTCCGTGG CCGATGCGCTGGTGCAGCGCGGCATGCTGCCCAGGGAAATCCGCATCTCG CTGCCCGGTCGCGCTTTGTCCTTTATCGCCCCGACGCAGCCGGCCTTCGA GATGTGGATCGTCGCCCTGCGCCGTGCCTCGCTAGCCAGCACCCGCGTCG ACGAGTACTACTCCATTGGCTCCCTCATTGGCGAGGGCATGAATGGTCAG GTGCGCCTGGCTCACGATAAGATGACGGACGAGCCCGTCGCCATCAAGAT GGTGCCGCGCTTGGGGCGCCAGAACGAGGCGCACTTTCTGGCCAGGGAGG TGCAGATCATTCTGTCCATCTCGCATCCGAACATCGTCCGCACCATCGAT GTGTTTGTGCGCACGCGTCGCATCCACTTCGTCATGGAATATCTCGCGGG CGGGGAACTTTTCGACTTCATCTCACAGAACACCCATTTCACAGAGACCC ATGCCGCCGCCGTCATGACCGACTTGCTCAACGCCTTGCACTACCTGCAT TCGCGAAATATTGTTCACCGCGACGTCAAATTGGAGAACTTGTTGTGCGC CAATACCACATGGCCTCTCAACGTCAAACTCGCCGATTTTGGTTTTGCGA ACTATCTGCACGCTGACAACCGCCCCTCGCTCCACAGTTTTGTCGGCACT CCGTACTACATTGCGCCTGAGATGCTACGGGGAGATCCGCACGGTTGTCC CGTTGACGTATGGGCCAGCGGTGTCGTCATGTATATCCTTCTAAGTGGCA AGTTTCCATTCGGTGGAAACAACGAGTCAGAATACTATCAACGTGTACTG GCAAAGAATGCGTACTTTCCTTCCGAAGAGTGGGCCAACGTTTCTGAGGA CGCCAAAAGCCTTGTCAGAGGTATGCTTTGTAAGGATCCGCGCAAGCGAC TCACTGTGGAACAGTGCTTGGCACACCCGTGGCTGGCGCGCGCTCAACCA GTGTTAAACACTACGGAACCACCCCTTTCCACGCCGGAACCGCTCGTAAC GTCCGAGCCTAATCTACGGACCGCCACAGCGCTGAAGCATAACCGTACCA AACGAGGCAAATGGCGCTATCTGGCCATGCTCAATCGCTCGCTTTCCGGC GCACCGGAGGCCATTATGCCCGACCAGCTGCAAGCCGATTATGCGCGAGC CAAACATACGCTGTCAGAATCTGCCACCGTGCCGTGCACGCGCTCTCCGC CTAGTGATTGCGCGAGTAACTCCGTGGCCGCCACGGACACCGATCTGGTC AATCGGCGGCCTAGTCTCATTCGTCGCATTCTATCATCGCAAAAGCTATC TTTGGACCGCTTCGAACGAGAGTGTGCGCCTCCGCGAGGCTGTGCAGAAG ACAAAGTGGATGAGGCTTCTGCGAACCCTAGAAAGACCTTGTCGTTGTTC TCAAAGGACGGGCCGTTGCGACGGTCGTTCCATCGAGTGAGCGAGCGCGC GACGGATGACGGAATCAACTTCGTCAACTCGCAATCGCAACGTCTACCGC CGAAAATCGCGAGGGAGAGACAACGGCAACAGAAAATGGCGCAAGCGGCG ATGAAACGCACGTCGAGAGCAGCGGGTGCTCTGGGAAGTTGTAAACTGAA CAGTGCCACGTTTGGCATGACGAATGAGGGGTATCATTCTTCTCCCAGAC TTGCGACGCATTTGTTGGAGCCGTTGCACGGTTTTGTGATGCCTTGCTCG GCATCGGAGGGCGCGGCGAGTGGTGGCGCGAGAAGTGAACGGATGGCGAT TGTTGATGAGCATGGCGATGAGGTGGGCAGCGAGAGTAGGGACGACGTTT TGCACGGCTGTTACTCGAGAGCACGCGCTGTGCCACTGGGATTGTAA back to top
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