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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 130081.XP_005706961.1 |
| Preferred name | ELAC2 |
| PFAMs | Lactamase_B_2,Lactamase_B_4 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K00784 |
| KEGG Pathway | ko03013,map03013 |
| GOs | GO:0000003,GO:0000394,GO:0000959,GO:0000963,GO:0000965,GO:0001558,GO:0002119,GO:0002164,GO:0003006,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0004549,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006139,GO:0006388,GO:0006396,GO:0006397,GO:0006399,GO:0006417,GO:0006725,GO:0006807,GO:0007049,GO:0007275,GO:0007276,GO:0007281,GO:0008033,GO:0008150,GO:0008152,GO:0008283,GO:0008380,GO:0009295,GO:0009791,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0016070,GO:0016071,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019222,GO:0019953,GO:0022412,GO:0022414,GO:0030154,GO:0030307,GO:0031123,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031426,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0034248,GO:0034250,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0036093,GO:0040008,GO:0040026,GO:0040028,GO:0042645,GO:0042779,GO:0042780,GO:0042781,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043628,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045727,GO:0045927,GO:0046483,GO:0048468,GO:0048518,GO:0048522,GO:0048580,GO:0048582,GO:0048609,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0051128,GO:0051171,GO:0051173,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051321,GO:0051704,GO:0060255,GO:0061062,GO:0061063,GO:0065007,GO:0070013,GO:0071704,GO:0072684,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0090615,GO:0090646,GO:0140040,GO:0140053,GO:0140098,GO:0140101,GO:1901360,GO:1902375,GO:1905267,GO:1990180,GO:2000026,GO:2000112 |
| Evalue | 4.94e-128 |
| EggNOG OGs | COG1234@1|root,KOG2121@2759|Eukaryota |
| EC | 3.1.26.11 |
| Description | 3'-tRNA processing endoribonuclease activity |
| COG category | C |
| BRITE | ko00000,ko00001,ko01000,ko03016 |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Gcaud3155.t1.stop1 | Gcaud3155.t1.stop1 | Gracilaria caudata M_176_S67 male | stop_codon | NODE_2057_length_7025_cov_4.195991 3474..3476 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Gcaud3155.t1.start1 | Gcaud3155.t1.start1 | Gracilaria caudata M_176_S67 male | start_codon | NODE_2057_length_7025_cov_4.195991 5775..5777 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gcaud3155.t1 ID=Gcaud3155.t1|Name=Gcaud3155.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=768bp MHSFVEVIGAGLEDTASCVQLFFDDSRYLFECGDGTQRLFAEYGVKFGRL KGIYLTSLAAPSIGGLFGFFLTVADAGKRKLDIVAPQGIRDLAQAAKGFT YRPALSLQINEIDIESKPDTLPITATKDENVTIQAVPVKCRRDMEIDTGF GAHYDAVSYICRVRDVRGKFNPDRALELGVKKGRSFGKLQKGESVVTDDG RVVTSKEVMSPKTPGPLFLVVSCPTVHHVCSLVSCSVLNPNHLDLFEDGA GSERRTKRVCLLVHLAPKEVLCSSEYREWCDLFGKDVGHIPLHSSVSPRG SAFVTQNEDLALLHFTLDNELFSLPPNSMDPGSPNTTEEARRLVADNKEG GKGALAERTTGARAVVQNSGEPYQDRLGKWIVAESKLKYVLSPKAVFGPD KTNVRPRFIERKPGHPKSPWRETPSPYAGEPLPGGPEGETPSYILRLNSG STAVRFFGTGACLPGKQRNVSSTMIDLFGRGGILLDCGEGTWGQMVRQFG LERAQRALCAIKVIFISHMHADHHLGLMCLLHERNLAMTTHEEFRHGPQL VVVGPSYLEQWLKTFQAAAKVPMLERLPKEQRCFRFFDAGALTDPQTPET KIFADTFGFELGCVEVIHCAFSYGVVVKDCVYGWKIVYSGDTRPCEALAE AGKYATLAIHEATLEDEMSAEAKEKRHCTVSEALDVCANKMKAWRTILTH FSQRYPRIPKLDNNTLQKLYESRATVACDLMCVDLTRLEDLPRITVALRD TFPDEVPVEQLGTHAGY* back to topspliced messenger RNA >Gcaud3155.t1 ID=Gcaud3155.t1|Name=Gcaud3155.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=2304bp|location=Sequence derived from alignment at NODE_2057_length_7025_cov_4.195991:3474..5777- (Gracilaria caudata M_176_S67 male)|Notes=Excludes all bases but those of type(s): exon.
ATGCATTCCTTCGTGGAGGTCATAGGCGCAGGACTTGAGGATACAGCTTC ATGTGTCCAACTATTTTTTGATGATAGTCGTTATCTTTTTGAATGTGGGG ACGGTACACAACGCCTCTTCGCAGAGTATGGCGTGAAGTTTGGGCGTCTA AAAGGCATATACTTGACTTCTCTTGCTGCACCCTCTATCGGGGGGTTATT CGGCTTTTTCCTCACAGTGGCAGATGCTGGAAAACGAAAGCTCGATATAG TTGCACCCCAAGGAATACGGGATTTAGCTCAGGCTGCCAAGGGCTTCACA TACAGACCTGCGCTTAGTCTACAAATTAATGAGATTGATATCGAGTCCAA ACCGGACACTCTACCGATCACCGCTACGAAAGACGAGAATGTAACCATTC AAGCAGTTCCGGTGAAGTGTCGTCGGGACATGGAGATTGACACAGGATTC GGGGCTCACTATGATGCTGTGTCATACATTTGTCGTGTTCGAGACGTCCG AGGCAAATTCAATCCTGATCGCGCCTTGGAGCTCGGGGTGAAGAAAGGGC GAAGTTTTGGAAAGCTACAGAAAGGTGAAAGTGTGGTCACAGACGATGGC AGAGTGGTCACCTCTAAAGAGGTCATGTCTCCAAAGACCCCAGGTCCACT GTTTCTTGTCGTATCATGTCCAACTGTTCATCATGTTTGCAGTCTAGTGT CATGCAGCGTACTGAACCCAAACCATCTTGATCTCTTCGAGGATGGTGCG GGTTCAGAACGGCGGACAAAGCGCGTTTGCCTACTGGTGCACTTAGCACC AAAAGAAGTGCTTTGCTCCTCGGAGTACCGTGAATGGTGTGACTTATTCG GAAAGGACGTGGGACATATTCCGTTGCATTCGTCAGTGAGCCCTCGAGGG TCTGCATTCGTCACACAGAATGAGGACCTCGCACTGCTACATTTCACCCT CGATAATGAACTATTTAGCCTACCTCCAAATTCTATGGATCCAGGATCTC CTAACACCACGGAAGAAGCCAGACGATTAGTGGCAGATAACAAGGAAGGG GGGAAAGGCGCTTTGGCTGAACGTACAACCGGAGCACGCGCTGTCGTACA AAACAGTGGTGAGCCTTATCAGGATCGCCTTGGAAAATGGATCGTCGCTG AAAGCAAACTGAAATATGTGCTTTCCCCCAAAGCGGTATTTGGCCCTGAC AAGACAAACGTGCGCCCTCGTTTCATTGAAAGGAAGCCTGGTCATCCGAA GAGCCCATGGAGGGAAACGCCATCCCCGTATGCAGGGGAGCCTCTCCCTG GAGGCCCGGAAGGTGAGACACCCAGCTACATTTTACGTCTAAACTCTGGC TCAACAGCAGTCCGCTTCTTCGGAACCGGTGCATGTTTGCCCGGCAAACA GAGAAACGTTTCTTCGACGATGATAGATTTATTTGGTCGGGGTGGTATCC TACTGGATTGCGGGGAGGGAACATGGGGCCAAATGGTCCGTCAGTTCGGA CTAGAACGTGCCCAACGTGCTTTGTGTGCTATAAAAGTGATTTTCATATC TCACATGCACGCAGATCACCACCTCGGCCTTATGTGCTTGCTGCATGAAC GAAACTTGGCGATGACAACACATGAAGAATTTCGACACGGGCCGCAACTG GTTGTAGTCGGGCCCTCATATTTGGAGCAATGGTTGAAAACCTTTCAAGC CGCTGCCAAGGTTCCTATGCTGGAGCGATTACCCAAGGAACAAAGATGCT TCCGGTTTTTTGACGCGGGCGCCCTGACAGATCCTCAAACTCCAGAGACT AAGATTTTTGCAGATACATTCGGGTTCGAACTTGGGTGTGTCGAGGTGAT TCACTGCGCCTTTTCGTACGGAGTGGTGGTCAAGGACTGCGTGTACGGCT GGAAAATTGTATACTCTGGCGATACCAGGCCATGCGAGGCTTTAGCCGAA GCGGGAAAATACGCAACGCTTGCCATCCACGAGGCTACTCTTGAAGATGA AATGTCAGCTGAGGCTAAGGAAAAGAGACACTGCACAGTCAGTGAAGCAC TAGATGTCTGTGCGAACAAGATGAAAGCGTGGAGAACGATTCTGACTCAC TTCTCACAGCGCTACCCAAGAATACCCAAGCTTGACAACAACACGTTACA GAAGTTGTATGAGAGTAGAGCAACAGTTGCTTGTGATCTAATGTGCGTTG ATCTGACAAGACTTGAAGACTTGCCAAGAATCACAGTAGCACTGCGAGAT ACTTTTCCAGATGAAGTTCCAGTTGAACAGCTGGGGACACATGCAGGGTA CTAA back to topprotein sequence of Gcaud3155.t1 >Gcaud3155.t1 ID=Gcaud3155.t1|Name=Gcaud3155.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=768bp
MHSFVEVIGAGLEDTASCVQLFFDDSRYLFECGDGTQRLFAEYGVKFGRL KGIYLTSLAAPSIGGLFGFFLTVADAGKRKLDIVAPQGIRDLAQAAKGFT YRPALSLQINEIDIESKPDTLPITATKDENVTIQAVPVKCRRDMEIDTGF GAHYDAVSYICRVRDVRGKFNPDRALELGVKKGRSFGKLQKGESVVTDDG RVVTSKEVMSPKTPGPLFLVVSCPTVHHVCSLVSCSVLNPNHLDLFEDGA GSERRTKRVCLLVHLAPKEVLCSSEYREWCDLFGKDVGHIPLHSSVSPRG SAFVTQNEDLALLHFTLDNELFSLPPNSMDPGSPNTTEEARRLVADNKEG GKGALAERTTGARAVVQNSGEPYQDRLGKWIVAESKLKYVLSPKAVFGPD KTNVRPRFIERKPGHPKSPWRETPSPYAGEPLPGGPEGETPSYILRLNSG STAVRFFGTGACLPGKQRNVSSTMIDLFGRGGILLDCGEGTWGQMVRQFG LERAQRALCAIKVIFISHMHADHHLGLMCLLHERNLAMTTHEEFRHGPQL VVVGPSYLEQWLKTFQAAAKVPMLERLPKEQRCFRFFDAGALTDPQTPET KIFADTFGFELGCVEVIHCAFSYGVVVKDCVYGWKIVYSGDTRPCEALAE AGKYATLAIHEATLEDEMSAEAKEKRHCTVSEALDVCANKMKAWRTILTH FSQRYPRIPKLDNNTLQKLYESRATVACDLMCVDLTRLEDLPRITVALRD TFPDEVPVEQLGTHAGY* back to topmRNA from alignment at NODE_2057_length_7025_cov_4.195991:3474..5777- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gcaud3155.t1 ID=Gcaud3155.t1|Name=Gcaud3155.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=2304bp|location=Sequence derived from alignment at NODE_2057_length_7025_cov_4.195991:3474..5777- (Gracilaria caudata M_176_S67 male) ATGCATTCCTTCGTGGAGGTCATAGGCGCAGGACTTGAGGATACAGCTTC
ATGTGTCCAACTATTTTTTGATGATAGTCGTTATCTTTTTGAATGTGGGG
ACGGTACACAACGCCTCTTCGCAGAGTATGGCGTGAAGTTTGGGCGTCTA
AAAGGCATATACTTGACTTCTCTTGCTGCACCCTCTATCGGGGGGTTATT
CGGCTTTTTCCTCACAGTGGCAGATGCTGGAAAACGAAAGCTCGATATAG
TTGCACCCCAAGGAATACGGGATTTAGCTCAGGCTGCCAAGGGCTTCACA
TACAGACCTGCGCTTAGTCTACAAATTAATGAGATTGATATCGAGTCCAA
ACCGGACACTCTACCGATCACCGCTACGAAAGACGAGAATGTAACCATTC
AAGCAGTTCCGGTGAAGTGTCGTCGGGACATGGAGATTGACACAGGATTC
GGGGCTCACTATGATGCTGTGTCATACATTTGTCGTGTTCGAGACGTCCG
AGGCAAATTCAATCCTGATCGCGCCTTGGAGCTCGGGGTGAAGAAAGGGC
GAAGTTTTGGAAAGCTACAGAAAGGTGAAAGTGTGGTCACAGACGATGGC
AGAGTGGTCACCTCTAAAGAGGTCATGTCTCCAAAGACCCCAGGTCCACT
GTTTCTTGTCGTATCATGTCCAACTGTTCATCATGTTTGCAGTCTAGTGT
CATGCAGCGTACTGAACCCAAACCATCTTGATCTCTTCGAGGATGGTGCG
GGTTCAGAACGGCGGACAAAGCGCGTTTGCCTACTGGTGCACTTAGCACC
AAAAGAAGTGCTTTGCTCCTCGGAGTACCGTGAATGGTGTGACTTATTCG
GAAAGGACGTGGGACATATTCCGTTGCATTCGTCAGTGAGCCCTCGAGGG
TCTGCATTCGTCACACAGAATGAGGACCTCGCACTGCTACATTTCACCCT
CGATAATGAACTATTTAGCCTACCTCCAAATTCTATGGATCCAGGATCTC
CTAACACCACGGAAGAAGCCAGACGATTAGTGGCAGATAACAAGGAAGGG
GGGAAAGGCGCTTTGGCTGAACGTACAACCGGAGCACGCGCTGTCGTACA
AAACAGTGGTGAGCCTTATCAGGATCGCCTTGGAAAATGGATCGTCGCTG
AAAGCAAACTGAAATATGTGCTTTCCCCCAAAGCGGTATTTGGCCCTGAC
AAGACAAACGTGCGCCCTCGTTTCATTGAAAGGAAGCCTGGTCATCCGAA
GAGCCCATGGAGGGAAACGCCATCCCCGTATGCAGGGGAGCCTCTCCCTG
GAGGCCCGGAAGGTGAGACACCCAGCTACATTTTACGTCTAAACTCTGGC
TCAACAGCAGTCCGCTTCTTCGGAACCGGTGCATGTTTGCCCGGCAAACA
GAGAAACGTTTCTTCGACGATGATAGATTTATTTGGTCGGGGTGGTATCC
TACTGGATTGCGGGGAGGGAACATGGGGCCAAATGGTCCGTCAGTTCGGA
CTAGAACGTGCCCAACGTGCTTTGTGTGCTATAAAAGTGATTTTCATATC
TCACATGCACGCAGATCACCACCTCGGCCTTATGTGCTTGCTGCATGAAC
GAAACTTGGCGATGACAACACATGAAGAATTTCGACACGGGCCGCAACTG
GTTGTAGTCGGGCCCTCATATTTGGAGCAATGGTTGAAAACCTTTCAAGC
CGCTGCCAAGGTTCCTATGCTGGAGCGATTACCCAAGGAACAAAGATGCT
TCCGGTTTTTTGACGCGGGCGCCCTGACAGATCCTCAAACTCCAGAGACT
AAGATTTTTGCAGATACATTCGGGTTCGAACTTGGGTGTGTCGAGGTGAT
TCACTGCGCCTTTTCGTACGGAGTGGTGGTCAAGGACTGCGTGTACGGCT
GGAAAATTGTATACTCTGGCGATACCAGGCCATGCGAGGCTTTAGCCGAA
GCGGGAAAATACGCAACGCTTGCCATCCACGAGGCTACTCTTGAAGATGA
AATGTCAGCTGAGGCTAAGGAAAAGAGACACTGCACAGTCAGTGAAGCAC
TAGATGTCTGTGCGAACAAGATGAAAGCGTGGAGAACGATTCTGACTCAC
TTCTCACAGCGCTACCCAAGAATACCCAAGCTTGACAACAACACGTTACA
GAAGTTGTATGAGAGTAGAGCAACAGTTGCTTGTGATCTAATGTGCGTTG
ATCTGACAAGACTTGAAGACTTGCCAAGAATCACAGTAGCACTGCGAGAT
ACTTTTCCAGATGAAGTTCCAGTTGAACAGCTGGGGACACATGCAGGGTA
CTAA back to topCoding sequence (CDS) from alignment at NODE_2057_length_7025_cov_4.195991:3474..5777- >Gcaud3155.t1 ID=Gcaud3155.t1|Name=Gcaud3155.t1|organism=Gracilaria caudata M_176_S67 male|type=CDS|length=2304bp|location=Sequence derived from alignment at NODE_2057_length_7025_cov_4.195991:3474..5777- (Gracilaria caudata M_176_S67 male) ATGCATTCCTTCGTGGAGGTCATAGGCGCAGGACTTGAGGATACAGCTTC ATGTGTCCAACTATTTTTTGATGATAGTCGTTATCTTTTTGAATGTGGGG ACGGTACACAACGCCTCTTCGCAGAGTATGGCGTGAAGTTTGGGCGTCTA AAAGGCATATACTTGACTTCTCTTGCTGCACCCTCTATCGGGGGGTTATT CGGCTTTTTCCTCACAGTGGCAGATGCTGGAAAACGAAAGCTCGATATAG TTGCACCCCAAGGAATACGGGATTTAGCTCAGGCTGCCAAGGGCTTCACA TACAGACCTGCGCTTAGTCTACAAATTAATGAGATTGATATCGAGTCCAA ACCGGACACTCTACCGATCACCGCTACGAAAGACGAGAATGTAACCATTC AAGCAGTTCCGGTGAAGTGTCGTCGGGACATGGAGATTGACACAGGATTC GGGGCTCACTATGATGCTGTGTCATACATTTGTCGTGTTCGAGACGTCCG AGGCAAATTCAATCCTGATCGCGCCTTGGAGCTCGGGGTGAAGAAAGGGC GAAGTTTTGGAAAGCTACAGAAAGGTGAAAGTGTGGTCACAGACGATGGC AGAGTGGTCACCTCTAAAGAGGTCATGTCTCCAAAGACCCCAGGTCCACT GTTTCTTGTCGTATCATGTCCAACTGTTCATCATGTTTGCAGTCTAGTGT CATGCAGCGTACTGAACCCAAACCATCTTGATCTCTTCGAGGATGGTGCG GGTTCAGAACGGCGGACAAAGCGCGTTTGCCTACTGGTGCACTTAGCACC AAAAGAAGTGCTTTGCTCCTCGGAGTACCGTGAATGGTGTGACTTATTCG GAAAGGACGTGGGACATATTCCGTTGCATTCGTCAGTGAGCCCTCGAGGG TCTGCATTCGTCACACAGAATGAGGACCTCGCACTGCTACATTTCACCCT CGATAATGAACTATTTAGCCTACCTCCAAATTCTATGGATCCAGGATCTC CTAACACCACGGAAGAAGCCAGACGATTAGTGGCAGATAACAAGGAAGGG GGGAAAGGCGCTTTGGCTGAACGTACAACCGGAGCACGCGCTGTCGTACA AAACAGTGGTGAGCCTTATCAGGATCGCCTTGGAAAATGGATCGTCGCTG AAAGCAAACTGAAATATGTGCTTTCCCCCAAAGCGGTATTTGGCCCTGAC AAGACAAACGTGCGCCCTCGTTTCATTGAAAGGAAGCCTGGTCATCCGAA GAGCCCATGGAGGGAAACGCCATCCCCGTATGCAGGGGAGCCTCTCCCTG GAGGCCCGGAAGGTGAGACACCCAGCTACATTTTACGTCTAAACTCTGGC TCAACAGCAGTCCGCTTCTTCGGAACCGGTGCATGTTTGCCCGGCAAACA GAGAAACGTTTCTTCGACGATGATAGATTTATTTGGTCGGGGTGGTATCC TACTGGATTGCGGGGAGGGAACATGGGGCCAAATGGTCCGTCAGTTCGGA CTAGAACGTGCCCAACGTGCTTTGTGTGCTATAAAAGTGATTTTCATATC TCACATGCACGCAGATCACCACCTCGGCCTTATGTGCTTGCTGCATGAAC GAAACTTGGCGATGACAACACATGAAGAATTTCGACACGGGCCGCAACTG GTTGTAGTCGGGCCCTCATATTTGGAGCAATGGTTGAAAACCTTTCAAGC CGCTGCCAAGGTTCCTATGCTGGAGCGATTACCCAAGGAACAAAGATGCT TCCGGTTTTTTGACGCGGGCGCCCTGACAGATCCTCAAACTCCAGAGACT AAGATTTTTGCAGATACATTCGGGTTCGAACTTGGGTGTGTCGAGGTGAT TCACTGCGCCTTTTCGTACGGAGTGGTGGTCAAGGACTGCGTGTACGGCT GGAAAATTGTATACTCTGGCGATACCAGGCCATGCGAGGCTTTAGCCGAA GCGGGAAAATACGCAACGCTTGCCATCCACGAGGCTACTCTTGAAGATGA AATGTCAGCTGAGGCTAAGGAAAAGAGACACTGCACAGTCAGTGAAGCAC TAGATGTCTGTGCGAACAAGATGAAAGCGTGGAGAACGATTCTGACTCAC TTCTCACAGCGCTACCCAAGAATACCCAAGCTTGACAACAACACGTTACA GAAGTTGTATGAGAGTAGAGCAACAGTTGCTTGTGATCTAATGTGCGTTG ATCTGACAAGACTTGAAGACTTGCCAAGAATCACAGTAGCACTGCGAGAT ACTTTTCCAGATGAAGTTCCAGTTGAACAGCTGGGGACACATGCAGGGTA CTAA back to top
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