Gcaud2747.t1 (mRNA) Gracilaria caudata M_176_S67 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGcaud2747.t1
Unique NameGcaud2747.t1
TypemRNA
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length1378
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_724_length_19053_cov_4.072935contigNODE_724_length_19053_cov_4.072935:3182..7315 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog192875.XP_004364804.1
Preferred nameNSMAF
PFAMsBeach,GRAM,WD40
Max annot lvl33154|Opisthokonta
KEGG koko:K18953
KEGG Pathwayko04071,map04071
GOsGO:0003674,GO:0005102,GO:0005123,GO:0005126,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006629,GO:0006643,GO:0006665,GO:0006672,GO:0006807,GO:0007154,GO:0007165,GO:0008047,GO:0008150,GO:0008152,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010556,GO:0010941,GO:0010942,GO:0016004,GO:0016230,GO:0019216,GO:0019222,GO:0023052,GO:0030234,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032813,GO:0034248,GO:0034250,GO:0034641,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043085,GO:0043603,GO:0044087,GO:0044093,GO:0044237,GO:0044238,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0045834,GO:0046889,GO:0046890,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051716,GO:0060229,GO:0060255,GO:0065007,GO:0065009,GO:0071704,GO:0080090,GO:0090153,GO:0090154,GO:0098772,GO:1901564,GO:1905038,GO:2000303,GO:2000304
Evalue2.3e-13
EggNOG OGsKOG0266@1|root,KOG1786@1|root,KOG0266@2759|Eukaryota,KOG1786@2759|Eukaryota,38CWR@33154|Opisthokonta
DescriptionNeutral sphingomyelinase (n-smase) activation associated factor
COG categoryTU
BRITEko00000,ko00001
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2747Gcaud2747Gracilaria caudata M_176_S67 malegeneNODE_724_length_19053_cov_4.072935 3182..7315 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gcaud2747.t1.stop1Gcaud2747.t1.stop1Gracilaria caudata M_176_S67 malestop_codonNODE_724_length_19053_cov_4.072935 3182..3184 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gcaud2747.t1.CDS1Gcaud2747.t1.CDS1Gracilaria caudata M_176_S67 maleCDSNODE_724_length_19053_cov_4.072935 3182..7315 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gcaud2747.t1.exon1Gcaud2747.t1.exon1Gracilaria caudata M_176_S67 maleexonNODE_724_length_19053_cov_4.072935 3182..7315 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gcaud2747.t1.start1Gcaud2747.t1.start1Gracilaria caudata M_176_S67 malestart_codonNODE_724_length_19053_cov_4.072935 7313..7315 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gcaud2747.t1Gcaud2747.t1Gracilaria caudata M_176_S67 malepolypeptideNODE_724_length_19053_cov_4.072935 3182..7315 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gcaud2747.t1 ID=Gcaud2747.t1|Name=Gcaud2747.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=1378bp
MAEGLRRMFSNPSSSIREALGGIELRLLPRQRFNQRLAHVFDAAQQLKKE
LESFSNQLRDKKEAIPQEIWKALNVQRGDLHARYRAIMDTLVQIGANKPH
QRVARMWFAPSSKKRCQMLHSEIREVKHTLTELITRLTILSATEKIKSEL
TRLVSDDSRRAHNQPHLMDDDSASVRSAKVSRERLRSSLHDLFNYRDNTT
SESEPNPASPATSPGKSPEPARRNSSISSRREQSYAQSEPAASHKSKSEQ
GKGERKQCYCSRLAHPPVPQSMFDVAKPDSIECHTKSAILSASQQGGHFL
ALQGLPGTGKSTLLHALKHDEEIVANFTEGVHWLPLRSGVAEIRDAVSSI
AHLVCVTGNKEEAKDIEEMSDIQAAVEYASKHLSTKRMLLLLDKSWTAGD
VGSALVFKLKPLVTSRSGTVVVFISEDSEAIWNARRISMTPRDVLGEDTL
YIFLNHACFTKEELVDPESVEILRVLLLLCYGLPLAVAIAGKTIANATKC
GMTRKEAMKLYLEQHDGVFDEEQMDTPCITDIIGDHVQAALQILEQTYDN
TLPTGVTFRDLFLAFSVIDKGHNLPLEVLRQLWNLSPGVSHKVATLFDAT
GLAILLMKNNRNADELQVHDLVHDHVCSELTLVDFTKYHSKLLKSCADVL
GDERPSNSDECRAWWKLHIPDGGYYNRNLIRHLYHARYRTEMLKLVVHPK
WILAQLAEIGADQVDNDIGFVTDFLTFSNSRDSQTLEMTVEEYEEIGAAA
RAAAMNAGNKSQQIAFHFYDQLLAVSKARGILSSYLRDLEKETEDLRLTP
VQPCLGSPKNQLRSVVRLLSRPQCMVTLAGDNYVACGCSDGRIIMLDTRR
KRIVGQWRGHSDAVTSMCRSRSGKLIVTSSSDMTIKAWDCASSGQLGEIA
LTDDRQVASIAVTEDEFFVIAGFHDGSLIVWDLESGDRVAEAFNVKSPSA
FTKIDVLAGGDRMITSSADGFIRMWKLETTVNANEDLILHLKEDKSWSSE
AFSEGVGCLTIHVESQILASASNGFIRISDLRNGTTRKLFDTSGRFGRIT
TMSFNENGKHLVFGSDDKVVHILDVEKNVLIGKPLRGHTHGVCGVAFLSR
GTRVISAAGDETVRIWNVDNLRSGAVPSHHSGTVTSLALTENGNVVVSAS
LDGSLRLWDVTTGTSIGKPLTGYREKISAVAVSNKGDRVISGAYDGSLRL
WKIDGDAHESVSTFQAHSDWISSIDISPAGERAVSTSFDGSVRVWDLTKC
DGKYKSLRGHKGRVRTVKILEDGERVISVSRHELRVWNLLRGTCIQQFEQ
NNIGLMSTVSVLRFLEEETEEANPSPPVQCKGFHVMYDKAVLATLPSSIE
CCKYSQSNGTMCAGLLNGQVVFMKLRV*
back to top

spliced messenger RNA

>Gcaud2747.t1 ID=Gcaud2747.t1|Name=Gcaud2747.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=4134bp|location=Sequence derived from alignment at NODE_724_length_19053_cov_4.072935:3182..7315- (Gracilaria caudata M_176_S67 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCCGAAGGATTGCGACGAATGTTCTCCAATCCGTCCAGCTCCATTCG
AGAGGCGTTGGGCGGCATAGAGCTTCGGCTCTTGCCGCGACAACGCTTTA
ATCAGAGGCTCGCGCATGTGTTTGACGCTGCTCAACAGCTTAAGAAAGAG
CTAGAATCCTTCTCCAACCAGCTCAGGGACAAGAAGGAAGCCATCCCCCA
AGAAATATGGAAGGCGTTGAACGTTCAGCGTGGGGACCTCCATGCGCGCT
ATCGAGCCATTATGGACACTCTAGTTCAAATTGGAGCCAACAAACCGCAC
CAACGAGTCGCTCGCATGTGGTTTGCACCGTCCTCAAAGAAACGGTGCCA
GATGCTTCATTCCGAAATTCGCGAAGTGAAACATACACTGACCGAACTCA
TCACGCGTCTTACTATTCTTTCTGCCACCGAGAAAATCAAGTCTGAGCTT
ACTAGACTAGTATCTGATGACTCTCGACGTGCTCACAATCAGCCCCATTT
AATGGATGACGACTCGGCCAGTGTGCGTTCAGCCAAAGTTAGCAGGGAAA
GACTCCGCAGCTCCTTGCATGATCTGTTCAACTATCGGGACAATACGACA
TCCGAATCTGAACCAAACCCCGCCAGCCCAGCTACATCGCCAGGGAAGTC
ACCCGAGCCAGCTCGTAGAAACTCTTCTATCAGCTCTCGGCGGGAGCAAT
CGTACGCACAATCCGAACCAGCTGCTTCACATAAGTCGAAATCTGAACAA
GGGAAAGGGGAACGAAAACAGTGTTACTGCTCTCGTCTGGCTCACCCTCC
TGTTCCACAATCCATGTTTGATGTTGCAAAGCCGGACAGCATTGAATGCC
ACACCAAAAGTGCCATTCTCTCTGCCAGCCAGCAAGGTGGACACTTCTTG
GCACTACAGGGGCTACCGGGGACAGGGAAGTCAACTTTACTACACGCCCT
CAAACACGACGAAGAAATCGTTGCAAATTTCACAGAAGGAGTTCACTGGC
TTCCACTACGCTCAGGAGTAGCGGAAATTCGCGATGCAGTAAGTTCTATC
GCTCACCTGGTGTGTGTCACCGGTAATAAGGAAGAAGCAAAAGATATTGA
AGAAATGAGTGATATTCAGGCCGCTGTCGAATATGCTTCGAAACATTTGT
CTACGAAGCGAATGTTGTTGCTACTTGACAAGAGCTGGACAGCGGGAGAT
GTCGGTTCTGCCCTAGTGTTTAAACTGAAACCGTTAGTCACTTCTCGTTC
CGGAACGGTGGTAGTGTTCATTTCTGAAGACTCTGAGGCCATATGGAACG
CTCGTCGTATTTCGATGACACCTCGTGACGTATTGGGTGAAGATACATTG
TACATTTTCCTGAATCATGCTTGTTTCACCAAAGAGGAACTCGTGGATCC
GGAATCAGTTGAAATTTTGCGAGTTCTACTACTGCTATGTTACGGACTAC
CGTTGGCTGTGGCAATTGCCGGAAAGACCATTGCGAACGCCACAAAGTGT
GGCATGACTCGAAAAGAAGCTATGAAACTGTATCTTGAACAGCATGATGG
CGTCTTTGATGAGGAACAGATGGATACCCCCTGCATCACCGATATCATAG
GTGATCACGTTCAGGCGGCCCTGCAGATCCTCGAGCAAACTTATGACAAC
ACTCTGCCGACGGGTGTCACTTTCCGAGACCTCTTCCTGGCCTTCAGTGT
TATAGATAAAGGCCACAACTTGCCGTTAGAAGTCTTACGCCAACTGTGGA
ATCTATCTCCCGGTGTTAGTCATAAAGTGGCGACTTTATTTGACGCTACA
GGGCTCGCGATTTTACTGATGAAGAACAATCGAAACGCAGATGAGCTTCA
GGTTCATGATCTCGTACATGACCATGTCTGTAGTGAGTTGACTTTAGTGG
ATTTCACGAAGTACCATTCCAAGCTCTTGAAGTCGTGTGCGGACGTACTG
GGTGATGAACGGCCATCAAACTCGGATGAGTGTCGAGCGTGGTGGAAGCT
TCATATTCCGGACGGAGGTTACTACAACAGAAACCTTATTCGCCATCTTT
ACCACGCTAGATATCGCACCGAAATGCTGAAGCTTGTTGTGCATCCAAAA
TGGATACTTGCGCAGCTTGCTGAAATTGGAGCAGATCAAGTGGATAATGA
TATTGGGTTTGTCACTGATTTTCTCACGTTCAGTAACTCCAGAGACAGTC
AAACGCTGGAAATGACCGTGGAGGAATACGAAGAAATCGGTGCGGCGGCT
AGAGCAGCAGCGATGAATGCAGGAAACAAATCGCAGCAAATAGCGTTTCA
CTTTTACGATCAGTTACTTGCTGTGAGCAAAGCTCGGGGTATACTGTCCT
CGTATCTTCGAGATCTTGAGAAGGAGACTGAAGATCTACGGCTCACACCC
GTTCAACCATGCCTGGGTTCACCAAAGAACCAGTTGCGCAGTGTGGTTCG
TCTTCTCTCACGCCCTCAATGCATGGTTACATTGGCGGGAGATAATTACG
TGGCGTGTGGGTGCAGTGACGGGCGGATTATCATGCTAGATACCAGACGA
AAAAGGATTGTGGGACAGTGGAGAGGCCATAGTGATGCAGTGACTTCTAT
GTGTCGATCCCGGAGTGGAAAACTCATAGTTACGAGTTCTTCGGATATGA
CGATTAAAGCGTGGGATTGTGCTTCGAGCGGACAACTTGGGGAGATTGCA
CTCACGGATGATCGACAAGTCGCAAGCATTGCAGTAACAGAAGATGAGTT
TTTCGTTATCGCTGGCTTCCACGACGGTTCTCTCATCGTCTGGGATTTGG
AATCTGGAGATCGAGTAGCTGAAGCATTTAATGTGAAGAGCCCGAGTGCT
TTCACAAAGATCGATGTTTTGGCCGGAGGTGATCGTATGATTACATCTAG
TGCAGATGGCTTCATTCGAATGTGGAAATTGGAAACAACGGTGAACGCGA
ATGAAGACCTTATCCTTCATCTTAAGGAAGATAAAAGTTGGTCTTCCGAA
GCTTTTTCCGAGGGGGTCGGATGCCTTACCATTCATGTTGAGTCTCAGAT
TTTGGCTTCGGCATCGAATGGTTTTATTCGTATTTCCGACTTGCGCAATG
GAACAACGAGAAAACTTTTCGATACCAGTGGACGTTTCGGAAGAATAACA
ACTATGAGCTTCAACGAGAACGGGAAACACCTTGTGTTTGGTTCTGACGA
TAAAGTGGTCCACATTTTGGATGTAGAAAAGAACGTTCTAATCGGGAAGC
CGCTTCGAGGCCACACGCATGGTGTTTGCGGTGTGGCATTCCTCTCGAGA
GGAACGCGGGTTATTTCAGCTGCAGGTGATGAGACGGTAAGAATATGGAA
CGTGGACAACCTCCGCAGTGGTGCTGTGCCATCACATCACTCAGGAACTG
TGACTTCTCTAGCGCTGACAGAGAATGGTAACGTTGTGGTCTCTGCCTCA
CTTGATGGTTCATTGCGCTTGTGGGATGTCACGACTGGAACTTCGATTGG
AAAACCACTCACTGGATACCGAGAAAAGATAAGTGCTGTTGCGGTTTCGA
ATAAGGGAGACCGCGTAATTTCCGGCGCGTATGATGGCAGTCTCAGACTG
TGGAAAATCGATGGAGATGCTCACGAGAGCGTAAGCACATTCCAAGCCCA
TTCAGACTGGATATCAAGTATAGATATTAGTCCTGCTGGAGAAAGAGCTG
TGAGTACATCCTTCGATGGCTCAGTTCGCGTATGGGATCTGACGAAATGC
GATGGTAAGTATAAAAGTCTTCGAGGTCATAAGGGTAGAGTCAGAACGGT
GAAGATATTGGAGGATGGAGAACGTGTCATTTCAGTGTCGAGACATGAGC
TCCGCGTCTGGAATCTATTACGCGGGACGTGTATCCAGCAGTTTGAGCAA
AACAACATTGGTCTCATGTCAACCGTATCCGTGCTTCGGTTCCTGGAGGA
GGAGACTGAAGAAGCAAACCCGTCACCCCCTGTACAGTGCAAAGGATTCC
ATGTGATGTATGATAAGGCGGTACTTGCAACTTTGCCCTCGTCGATAGAA
TGTTGCAAATATTCCCAGAGTAACGGAACAATGTGCGCTGGACTGCTGAA
CGGGCAAGTCGTGTTCATGAAACTGAGGGTATAA
back to top

protein sequence of Gcaud2747.t1

>Gcaud2747.t1 ID=Gcaud2747.t1|Name=Gcaud2747.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=1378bp
MAEGLRRMFSNPSSSIREALGGIELRLLPRQRFNQRLAHVFDAAQQLKKE
LESFSNQLRDKKEAIPQEIWKALNVQRGDLHARYRAIMDTLVQIGANKPH
QRVARMWFAPSSKKRCQMLHSEIREVKHTLTELITRLTILSATEKIKSEL
TRLVSDDSRRAHNQPHLMDDDSASVRSAKVSRERLRSSLHDLFNYRDNTT
SESEPNPASPATSPGKSPEPARRNSSISSRREQSYAQSEPAASHKSKSEQ
GKGERKQCYCSRLAHPPVPQSMFDVAKPDSIECHTKSAILSASQQGGHFL
ALQGLPGTGKSTLLHALKHDEEIVANFTEGVHWLPLRSGVAEIRDAVSSI
AHLVCVTGNKEEAKDIEEMSDIQAAVEYASKHLSTKRMLLLLDKSWTAGD
VGSALVFKLKPLVTSRSGTVVVFISEDSEAIWNARRISMTPRDVLGEDTL
YIFLNHACFTKEELVDPESVEILRVLLLLCYGLPLAVAIAGKTIANATKC
GMTRKEAMKLYLEQHDGVFDEEQMDTPCITDIIGDHVQAALQILEQTYDN
TLPTGVTFRDLFLAFSVIDKGHNLPLEVLRQLWNLSPGVSHKVATLFDAT
GLAILLMKNNRNADELQVHDLVHDHVCSELTLVDFTKYHSKLLKSCADVL
GDERPSNSDECRAWWKLHIPDGGYYNRNLIRHLYHARYRTEMLKLVVHPK
WILAQLAEIGADQVDNDIGFVTDFLTFSNSRDSQTLEMTVEEYEEIGAAA
RAAAMNAGNKSQQIAFHFYDQLLAVSKARGILSSYLRDLEKETEDLRLTP
VQPCLGSPKNQLRSVVRLLSRPQCMVTLAGDNYVACGCSDGRIIMLDTRR
KRIVGQWRGHSDAVTSMCRSRSGKLIVTSSSDMTIKAWDCASSGQLGEIA
LTDDRQVASIAVTEDEFFVIAGFHDGSLIVWDLESGDRVAEAFNVKSPSA
FTKIDVLAGGDRMITSSADGFIRMWKLETTVNANEDLILHLKEDKSWSSE
AFSEGVGCLTIHVESQILASASNGFIRISDLRNGTTRKLFDTSGRFGRIT
TMSFNENGKHLVFGSDDKVVHILDVEKNVLIGKPLRGHTHGVCGVAFLSR
GTRVISAAGDETVRIWNVDNLRSGAVPSHHSGTVTSLALTENGNVVVSAS
LDGSLRLWDVTTGTSIGKPLTGYREKISAVAVSNKGDRVISGAYDGSLRL
WKIDGDAHESVSTFQAHSDWISSIDISPAGERAVSTSFDGSVRVWDLTKC
DGKYKSLRGHKGRVRTVKILEDGERVISVSRHELRVWNLLRGTCIQQFEQ
NNIGLMSTVSVLRFLEEETEEANPSPPVQCKGFHVMYDKAVLATLPSSIE
CCKYSQSNGTMCAGLLNGQVVFMKLRV*
back to top

mRNA from alignment at NODE_724_length_19053_cov_4.072935:3182..7315-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gcaud2747.t1 ID=Gcaud2747.t1|Name=Gcaud2747.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=4134bp|location=Sequence derived from alignment at NODE_724_length_19053_cov_4.072935:3182..7315- (Gracilaria caudata M_176_S67 male)
ATGGCCGAAGGATTGCGACGAATGTTCTCCAATCCGTCCAGCTCCATTCG AGAGGCGTTGGGCGGCATAGAGCTTCGGCTCTTGCCGCGACAACGCTTTA ATCAGAGGCTCGCGCATGTGTTTGACGCTGCTCAACAGCTTAAGAAAGAG CTAGAATCCTTCTCCAACCAGCTCAGGGACAAGAAGGAAGCCATCCCCCA AGAAATATGGAAGGCGTTGAACGTTCAGCGTGGGGACCTCCATGCGCGCT ATCGAGCCATTATGGACACTCTAGTTCAAATTGGAGCCAACAAACCGCAC CAACGAGTCGCTCGCATGTGGTTTGCACCGTCCTCAAAGAAACGGTGCCA GATGCTTCATTCCGAAATTCGCGAAGTGAAACATACACTGACCGAACTCA TCACGCGTCTTACTATTCTTTCTGCCACCGAGAAAATCAAGTCTGAGCTT ACTAGACTAGTATCTGATGACTCTCGACGTGCTCACAATCAGCCCCATTT AATGGATGACGACTCGGCCAGTGTGCGTTCAGCCAAAGTTAGCAGGGAAA GACTCCGCAGCTCCTTGCATGATCTGTTCAACTATCGGGACAATACGACA TCCGAATCTGAACCAAACCCCGCCAGCCCAGCTACATCGCCAGGGAAGTC ACCCGAGCCAGCTCGTAGAAACTCTTCTATCAGCTCTCGGCGGGAGCAAT CGTACGCACAATCCGAACCAGCTGCTTCACATAAGTCGAAATCTGAACAA GGGAAAGGGGAACGAAAACAGTGTTACTGCTCTCGTCTGGCTCACCCTCC TGTTCCACAATCCATGTTTGATGTTGCAAAGCCGGACAGCATTGAATGCC ACACCAAAAGTGCCATTCTCTCTGCCAGCCAGCAAGGTGGACACTTCTTG GCACTACAGGGGCTACCGGGGACAGGGAAGTCAACTTTACTACACGCCCT CAAACACGACGAAGAAATCGTTGCAAATTTCACAGAAGGAGTTCACTGGC TTCCACTACGCTCAGGAGTAGCGGAAATTCGCGATGCAGTAAGTTCTATC GCTCACCTGGTGTGTGTCACCGGTAATAAGGAAGAAGCAAAAGATATTGA AGAAATGAGTGATATTCAGGCCGCTGTCGAATATGCTTCGAAACATTTGT CTACGAAGCGAATGTTGTTGCTACTTGACAAGAGCTGGACAGCGGGAGAT GTCGGTTCTGCCCTAGTGTTTAAACTGAAACCGTTAGTCACTTCTCGTTC CGGAACGGTGGTAGTGTTCATTTCTGAAGACTCTGAGGCCATATGGAACG CTCGTCGTATTTCGATGACACCTCGTGACGTATTGGGTGAAGATACATTG TACATTTTCCTGAATCATGCTTGTTTCACCAAAGAGGAACTCGTGGATCC GGAATCAGTTGAAATTTTGCGAGTTCTACTACTGCTATGTTACGGACTAC CGTTGGCTGTGGCAATTGCCGGAAAGACCATTGCGAACGCCACAAAGTGT GGCATGACTCGAAAAGAAGCTATGAAACTGTATCTTGAACAGCATGATGG CGTCTTTGATGAGGAACAGATGGATACCCCCTGCATCACCGATATCATAG GTGATCACGTTCAGGCGGCCCTGCAGATCCTCGAGCAAACTTATGACAAC ACTCTGCCGACGGGTGTCACTTTCCGAGACCTCTTCCTGGCCTTCAGTGT TATAGATAAAGGCCACAACTTGCCGTTAGAAGTCTTACGCCAACTGTGGA ATCTATCTCCCGGTGTTAGTCATAAAGTGGCGACTTTATTTGACGCTACA GGGCTCGCGATTTTACTGATGAAGAACAATCGAAACGCAGATGAGCTTCA GGTTCATGATCTCGTACATGACCATGTCTGTAGTGAGTTGACTTTAGTGG ATTTCACGAAGTACCATTCCAAGCTCTTGAAGTCGTGTGCGGACGTACTG GGTGATGAACGGCCATCAAACTCGGATGAGTGTCGAGCGTGGTGGAAGCT TCATATTCCGGACGGAGGTTACTACAACAGAAACCTTATTCGCCATCTTT ACCACGCTAGATATCGCACCGAAATGCTGAAGCTTGTTGTGCATCCAAAA TGGATACTTGCGCAGCTTGCTGAAATTGGAGCAGATCAAGTGGATAATGA TATTGGGTTTGTCACTGATTTTCTCACGTTCAGTAACTCCAGAGACAGTC AAACGCTGGAAATGACCGTGGAGGAATACGAAGAAATCGGTGCGGCGGCT AGAGCAGCAGCGATGAATGCAGGAAACAAATCGCAGCAAATAGCGTTTCA CTTTTACGATCAGTTACTTGCTGTGAGCAAAGCTCGGGGTATACTGTCCT CGTATCTTCGAGATCTTGAGAAGGAGACTGAAGATCTACGGCTCACACCC GTTCAACCATGCCTGGGTTCACCAAAGAACCAGTTGCGCAGTGTGGTTCG TCTTCTCTCACGCCCTCAATGCATGGTTACATTGGCGGGAGATAATTACG TGGCGTGTGGGTGCAGTGACGGGCGGATTATCATGCTAGATACCAGACGA AAAAGGATTGTGGGACAGTGGAGAGGCCATAGTGATGCAGTGACTTCTAT GTGTCGATCCCGGAGTGGAAAACTCATAGTTACGAGTTCTTCGGATATGA CGATTAAAGCGTGGGATTGTGCTTCGAGCGGACAACTTGGGGAGATTGCA CTCACGGATGATCGACAAGTCGCAAGCATTGCAGTAACAGAAGATGAGTT TTTCGTTATCGCTGGCTTCCACGACGGTTCTCTCATCGTCTGGGATTTGG AATCTGGAGATCGAGTAGCTGAAGCATTTAATGTGAAGAGCCCGAGTGCT TTCACAAAGATCGATGTTTTGGCCGGAGGTGATCGTATGATTACATCTAG TGCAGATGGCTTCATTCGAATGTGGAAATTGGAAACAACGGTGAACGCGA ATGAAGACCTTATCCTTCATCTTAAGGAAGATAAAAGTTGGTCTTCCGAA GCTTTTTCCGAGGGGGTCGGATGCCTTACCATTCATGTTGAGTCTCAGAT TTTGGCTTCGGCATCGAATGGTTTTATTCGTATTTCCGACTTGCGCAATG GAACAACGAGAAAACTTTTCGATACCAGTGGACGTTTCGGAAGAATAACA ACTATGAGCTTCAACGAGAACGGGAAACACCTTGTGTTTGGTTCTGACGA TAAAGTGGTCCACATTTTGGATGTAGAAAAGAACGTTCTAATCGGGAAGC CGCTTCGAGGCCACACGCATGGTGTTTGCGGTGTGGCATTCCTCTCGAGA GGAACGCGGGTTATTTCAGCTGCAGGTGATGAGACGGTAAGAATATGGAA CGTGGACAACCTCCGCAGTGGTGCTGTGCCATCACATCACTCAGGAACTG TGACTTCTCTAGCGCTGACAGAGAATGGTAACGTTGTGGTCTCTGCCTCA CTTGATGGTTCATTGCGCTTGTGGGATGTCACGACTGGAACTTCGATTGG AAAACCACTCACTGGATACCGAGAAAAGATAAGTGCTGTTGCGGTTTCGA ATAAGGGAGACCGCGTAATTTCCGGCGCGTATGATGGCAGTCTCAGACTG TGGAAAATCGATGGAGATGCTCACGAGAGCGTAAGCACATTCCAAGCCCA TTCAGACTGGATATCAAGTATAGATATTAGTCCTGCTGGAGAAAGAGCTG TGAGTACATCCTTCGATGGCTCAGTTCGCGTATGGGATCTGACGAAATGC GATGGTAAGTATAAAAGTCTTCGAGGTCATAAGGGTAGAGTCAGAACGGT GAAGATATTGGAGGATGGAGAACGTGTCATTTCAGTGTCGAGACATGAGC TCCGCGTCTGGAATCTATTACGCGGGACGTGTATCCAGCAGTTTGAGCAA AACAACATTGGTCTCATGTCAACCGTATCCGTGCTTCGGTTCCTGGAGGA GGAGACTGAAGAAGCAAACCCGTCACCCCCTGTACAGTGCAAAGGATTCC ATGTGATGTATGATAAGGCGGTACTTGCAACTTTGCCCTCGTCGATAGAA TGTTGCAAATATTCCCAGAGTAACGGAACAATGTGCGCTGGACTGCTGAA CGGGCAAGTCGTGTTCATGAAACTGAGGGTATAA
back to top

Coding sequence (CDS) from alignment at NODE_724_length_19053_cov_4.072935:3182..7315-

>Gcaud2747.t1 ID=Gcaud2747.t1|Name=Gcaud2747.t1|organism=Gracilaria caudata M_176_S67 male|type=CDS|length=4134bp|location=Sequence derived from alignment at NODE_724_length_19053_cov_4.072935:3182..7315- (Gracilaria caudata M_176_S67 male)
ATGGCCGAAGGATTGCGACGAATGTTCTCCAATCCGTCCAGCTCCATTCG
AGAGGCGTTGGGCGGCATAGAGCTTCGGCTCTTGCCGCGACAACGCTTTA
ATCAGAGGCTCGCGCATGTGTTTGACGCTGCTCAACAGCTTAAGAAAGAG
CTAGAATCCTTCTCCAACCAGCTCAGGGACAAGAAGGAAGCCATCCCCCA
AGAAATATGGAAGGCGTTGAACGTTCAGCGTGGGGACCTCCATGCGCGCT
ATCGAGCCATTATGGACACTCTAGTTCAAATTGGAGCCAACAAACCGCAC
CAACGAGTCGCTCGCATGTGGTTTGCACCGTCCTCAAAGAAACGGTGCCA
GATGCTTCATTCCGAAATTCGCGAAGTGAAACATACACTGACCGAACTCA
TCACGCGTCTTACTATTCTTTCTGCCACCGAGAAAATCAAGTCTGAGCTT
ACTAGACTAGTATCTGATGACTCTCGACGTGCTCACAATCAGCCCCATTT
AATGGATGACGACTCGGCCAGTGTGCGTTCAGCCAAAGTTAGCAGGGAAA
GACTCCGCAGCTCCTTGCATGATCTGTTCAACTATCGGGACAATACGACA
TCCGAATCTGAACCAAACCCCGCCAGCCCAGCTACATCGCCAGGGAAGTC
ACCCGAGCCAGCTCGTAGAAACTCTTCTATCAGCTCTCGGCGGGAGCAAT
CGTACGCACAATCCGAACCAGCTGCTTCACATAAGTCGAAATCTGAACAA
GGGAAAGGGGAACGAAAACAGTGTTACTGCTCTCGTCTGGCTCACCCTCC
TGTTCCACAATCCATGTTTGATGTTGCAAAGCCGGACAGCATTGAATGCC
ACACCAAAAGTGCCATTCTCTCTGCCAGCCAGCAAGGTGGACACTTCTTG
GCACTACAGGGGCTACCGGGGACAGGGAAGTCAACTTTACTACACGCCCT
CAAACACGACGAAGAAATCGTTGCAAATTTCACAGAAGGAGTTCACTGGC
TTCCACTACGCTCAGGAGTAGCGGAAATTCGCGATGCAGTAAGTTCTATC
GCTCACCTGGTGTGTGTCACCGGTAATAAGGAAGAAGCAAAAGATATTGA
AGAAATGAGTGATATTCAGGCCGCTGTCGAATATGCTTCGAAACATTTGT
CTACGAAGCGAATGTTGTTGCTACTTGACAAGAGCTGGACAGCGGGAGAT
GTCGGTTCTGCCCTAGTGTTTAAACTGAAACCGTTAGTCACTTCTCGTTC
CGGAACGGTGGTAGTGTTCATTTCTGAAGACTCTGAGGCCATATGGAACG
CTCGTCGTATTTCGATGACACCTCGTGACGTATTGGGTGAAGATACATTG
TACATTTTCCTGAATCATGCTTGTTTCACCAAAGAGGAACTCGTGGATCC
GGAATCAGTTGAAATTTTGCGAGTTCTACTACTGCTATGTTACGGACTAC
CGTTGGCTGTGGCAATTGCCGGAAAGACCATTGCGAACGCCACAAAGTGT
GGCATGACTCGAAAAGAAGCTATGAAACTGTATCTTGAACAGCATGATGG
CGTCTTTGATGAGGAACAGATGGATACCCCCTGCATCACCGATATCATAG
GTGATCACGTTCAGGCGGCCCTGCAGATCCTCGAGCAAACTTATGACAAC
ACTCTGCCGACGGGTGTCACTTTCCGAGACCTCTTCCTGGCCTTCAGTGT
TATAGATAAAGGCCACAACTTGCCGTTAGAAGTCTTACGCCAACTGTGGA
ATCTATCTCCCGGTGTTAGTCATAAAGTGGCGACTTTATTTGACGCTACA
GGGCTCGCGATTTTACTGATGAAGAACAATCGAAACGCAGATGAGCTTCA
GGTTCATGATCTCGTACATGACCATGTCTGTAGTGAGTTGACTTTAGTGG
ATTTCACGAAGTACCATTCCAAGCTCTTGAAGTCGTGTGCGGACGTACTG
GGTGATGAACGGCCATCAAACTCGGATGAGTGTCGAGCGTGGTGGAAGCT
TCATATTCCGGACGGAGGTTACTACAACAGAAACCTTATTCGCCATCTTT
ACCACGCTAGATATCGCACCGAAATGCTGAAGCTTGTTGTGCATCCAAAA
TGGATACTTGCGCAGCTTGCTGAAATTGGAGCAGATCAAGTGGATAATGA
TATTGGGTTTGTCACTGATTTTCTCACGTTCAGTAACTCCAGAGACAGTC
AAACGCTGGAAATGACCGTGGAGGAATACGAAGAAATCGGTGCGGCGGCT
AGAGCAGCAGCGATGAATGCAGGAAACAAATCGCAGCAAATAGCGTTTCA
CTTTTACGATCAGTTACTTGCTGTGAGCAAAGCTCGGGGTATACTGTCCT
CGTATCTTCGAGATCTTGAGAAGGAGACTGAAGATCTACGGCTCACACCC
GTTCAACCATGCCTGGGTTCACCAAAGAACCAGTTGCGCAGTGTGGTTCG
TCTTCTCTCACGCCCTCAATGCATGGTTACATTGGCGGGAGATAATTACG
TGGCGTGTGGGTGCAGTGACGGGCGGATTATCATGCTAGATACCAGACGA
AAAAGGATTGTGGGACAGTGGAGAGGCCATAGTGATGCAGTGACTTCTAT
GTGTCGATCCCGGAGTGGAAAACTCATAGTTACGAGTTCTTCGGATATGA
CGATTAAAGCGTGGGATTGTGCTTCGAGCGGACAACTTGGGGAGATTGCA
CTCACGGATGATCGACAAGTCGCAAGCATTGCAGTAACAGAAGATGAGTT
TTTCGTTATCGCTGGCTTCCACGACGGTTCTCTCATCGTCTGGGATTTGG
AATCTGGAGATCGAGTAGCTGAAGCATTTAATGTGAAGAGCCCGAGTGCT
TTCACAAAGATCGATGTTTTGGCCGGAGGTGATCGTATGATTACATCTAG
TGCAGATGGCTTCATTCGAATGTGGAAATTGGAAACAACGGTGAACGCGA
ATGAAGACCTTATCCTTCATCTTAAGGAAGATAAAAGTTGGTCTTCCGAA
GCTTTTTCCGAGGGGGTCGGATGCCTTACCATTCATGTTGAGTCTCAGAT
TTTGGCTTCGGCATCGAATGGTTTTATTCGTATTTCCGACTTGCGCAATG
GAACAACGAGAAAACTTTTCGATACCAGTGGACGTTTCGGAAGAATAACA
ACTATGAGCTTCAACGAGAACGGGAAACACCTTGTGTTTGGTTCTGACGA
TAAAGTGGTCCACATTTTGGATGTAGAAAAGAACGTTCTAATCGGGAAGC
CGCTTCGAGGCCACACGCATGGTGTTTGCGGTGTGGCATTCCTCTCGAGA
GGAACGCGGGTTATTTCAGCTGCAGGTGATGAGACGGTAAGAATATGGAA
CGTGGACAACCTCCGCAGTGGTGCTGTGCCATCACATCACTCAGGAACTG
TGACTTCTCTAGCGCTGACAGAGAATGGTAACGTTGTGGTCTCTGCCTCA
CTTGATGGTTCATTGCGCTTGTGGGATGTCACGACTGGAACTTCGATTGG
AAAACCACTCACTGGATACCGAGAAAAGATAAGTGCTGTTGCGGTTTCGA
ATAAGGGAGACCGCGTAATTTCCGGCGCGTATGATGGCAGTCTCAGACTG
TGGAAAATCGATGGAGATGCTCACGAGAGCGTAAGCACATTCCAAGCCCA
TTCAGACTGGATATCAAGTATAGATATTAGTCCTGCTGGAGAAAGAGCTG
TGAGTACATCCTTCGATGGCTCAGTTCGCGTATGGGATCTGACGAAATGC
GATGGTAAGTATAAAAGTCTTCGAGGTCATAAGGGTAGAGTCAGAACGGT
GAAGATATTGGAGGATGGAGAACGTGTCATTTCAGTGTCGAGACATGAGC
TCCGCGTCTGGAATCTATTACGCGGGACGTGTATCCAGCAGTTTGAGCAA
AACAACATTGGTCTCATGTCAACCGTATCCGTGCTTCGGTTCCTGGAGGA
GGAGACTGAAGAAGCAAACCCGTCACCCCCTGTACAGTGCAAAGGATTCC
ATGTGATGTATGATAAGGCGGTACTTGCAACTTTGCCCTCGTCGATAGAA
TGTTGCAAATATTCCCAGAGTAACGGAACAATGTGCGCTGGACTGCTGAA
CGGGCAAGTCGTGTTCATGAAACTGAGGGTATAA
back to top