Gcaud2215.t1 (mRNA) Gracilaria caudata M_176_S67 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Gcaud2215.t1
Unique Name	Gcaud2215.t1
Type	mRNA
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	1676

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_492_length_23814_cov_5.019981	contig	NODE_492_length_23814_cov_5.019981:9697..14831 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Properties


Property Name	Value
Seed ortholog	3712.Bo5g062910.1
PFAMs	ABC_membrane,ABC_tran
Max annot lvl	35493\|Streptophyta
KEGG ko	ko:K05665,ko:K05666
KEGG TC	3.A.1.208.2,3.A.1.208.8
KEGG Pathway	ko01523,ko01524,ko02010,ko04071,ko04976,ko04977,ko05206,map01523,map01524,map02010,map04071,map04976,map04977,map05206
GOs	GO:0000325,GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005911,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0008150,GO:0008324,GO:0008490,GO:0008509,GO:0009506,GO:0015075,GO:0015103,GO:0015105,GO:0015291,GO:0015318,GO:0015399,GO:0015405,GO:0015446,GO:0015698,GO:0015700,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030054,GO:0031090,GO:0034220,GO:0042221,GO:0042623,GO:0042625,GO:0042626,GO:0042946,GO:0042947,GO:0043225,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0046685,GO:0050896,GO:0051179,GO:0051234,GO:0055044,GO:0055085,GO:0071702,GO:0090662,GO:0098588,GO:0098655,GO:0098656,GO:0098660,GO:0098805,GO:0099131,GO:0099132,GO:0099133,GO:1901264,GO:1901505,GO:1901656,GO:1901683,GO:1901684,GO:1902417,GO:1902418
Evalue	5.66e-247
EggNOG OGs	COG1132@1\|root,KOG0054@2759\|Eukaryota,37IQY@33090\|Viridiplantae,3GA7A@35493\|Streptophyta,3HW3E@3699\|Brassicales
Description	Multidrug resistance-associated protein
COG category	Q
BRITE	ko00000,ko00001,ko02000

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud2215	Gcaud2215	Gracilaria caudata M_176_S67 male	gene	NODE_492_length_23814_cov_5.019981 9697..14831 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gcaud2215.t1	Gcaud2215.t1	Gracilaria caudata M_176_S67 male	polypeptide	NODE_492_length_23814_cov_5.019981 9697..14831 +

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gcaud2215.t1.start1	Gcaud2215.t1.start1	Gracilaria caudata M_176_S67 male	start_codon	NODE_492_length_23814_cov_5.019981 9697..9699 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gcaud2215.t1.CDS1	Gcaud2215.t1.CDS1	Gracilaria caudata M_176_S67 male	CDS	NODE_492_length_23814_cov_5.019981 9697..10533 +
Gcaud2215.t1.CDS2	Gcaud2215.t1.CDS2	Gracilaria caudata M_176_S67 male	CDS	NODE_492_length_23814_cov_5.019981 10641..14831 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gcaud2215.t1.exon1	Gcaud2215.t1.exon1	Gracilaria caudata M_176_S67 male	exon	NODE_492_length_23814_cov_5.019981 9697..10533 +
Gcaud2215.t1.exon2	Gcaud2215.t1.exon2	Gracilaria caudata M_176_S67 male	exon	NODE_492_length_23814_cov_5.019981 10641..14831 +

The following intron feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gcaud2215.t1.intron1	Gcaud2215.t1.intron1	Gracilaria caudata M_176_S67 male	intron	NODE_492_length_23814_cov_5.019981 10534..10640 +

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gcaud2215.t1.stop1	Gcaud2215.t1.stop1	Gracilaria caudata M_176_S67 male	stop_codon	NODE_492_length_23814_cov_5.019981 14829..14831 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at NODE_492_length_23814_cov_5.019981:9697..14831+
coding sequence from alignment at NODE_492_length_23814_cov_5.019981:9697..14831+

mRNA sequence

>Gcaud2215.t1 ID=Gcaud2215.t1|Name=Gcaud2215.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=1676bp
MALLHQLPLILCTLYFIFRLLTADPFIPRRARTRFPYVSALVFLIPIPLL
PLLPHVLITSFADRFFLLLSYVLASFLALRYAFAEPHMSQLYPYPAHAYP
RLLLWRVDVVLYLLFLPVIALLQQASLLTLTFCTASAITTTTIFLIELVR
RSQSALPHQLFALAFQPASSASTIEHAPPTVRHASALSLLSFDWVTSIVV
TGRSRALEFTDVIPISERFNCHTSGKRRFSPFWRAELERPYPRLLRALFH
AFGARFMLGGCLKLINDVFLFVSPMLLRSIISHLQHRSQGYETSVKGFLL
ACAMFGSYFTQLLVFNQYFNVMSTMQALLRGAIVSAVFEKSCRLSPESRA
LYTSGQIQNLMSNDSRMVSDVVLYLHMVWSSVEQITVAMVLLVQLLGWGP
TAAGVLFIMSSMFIQSKLVGTIKSYREKASARTDERVKFVAEAIKGIKLV
KLYAWELSFVKRILGARTRELDLLRKMAILDAWNSVLVTSLPTVLTIIVF
TAYALFVHELDAAVVFPAIALFNVIRPSLMFLPNILISTARAAASLNRLR
SFLICEELIPLHEGHYAMDRDLLEFNKIDLATSNASFTWDPSISRAYPTL
SGVTFWIPEGKLVAVVGPTGSGKSTLLAGLLGEVPIIDGEAGVRQGRSIS
FCDQVPFIHNATVRDNILFGKPYDEASYRTTIRVCNLLSDLKMLPGGDLT
EIGGRGVNLSGGQRARVALARAVYARADICLLDDPLCAVDAHVGKSIFQN
CIASEMRGTTRILTTNQIHYAAAPEVDMVIVVKNGTVVEAGPRKELLSLD
SEFSSMVKAAGELGASSEPSHAVNHARNIESRYRQRQKIEEEELDIQQTL
NAAERTVTEAKETTSIVDSDKIPDYGAIEAGRLTKKETKQKGRVEFKHYK
TYLRGMGIRSWVPAVLLCATGAQSMSLCVNVWLSDWSDQRTSDNTFFRLL
VFFIFGFFTILVAGIASFSLQFGSIRASVRLHEKLLLSVFGAPSSFFNST
PDGRLVNRFNSDLDKIDSSLAATLQSLFRLGLNLVFTLGLILWATPLFIL
AMIPIAAVCLYVQEFYRKTSVDLRRLEALARSPLYSHFSETLEGVVTIRA
FGDVPRTTMINSQYTDSLIQTTYASTYANRWLSVRLEGLGTILIFSATLL
AVLTPPDKISASMVGLVLSYTMQILGVMTWSVRQFTETESQLSAVERVAE
YSEPPFPQEERGGLEQFMRDQSRNSNTITRSESTGLISKETASNLAQSLT
PQRSRWPRRGKIEFKDVEMKYRDDLDPALKKVSFTVEPGEHVGIVGRTGA
GKSSAIQSIFRLYELNKGRILIDNTDISSMRLFDVRSSLGIIPQEPVCFS
GTIRSNLDMFGDHSEKDVQKAFDACGLQDTMKAKVTLDFEVAENGSNLSV
GQRQLLCLGRALLKDSQVLVLDEATSSVSNATDQKIQKTLRDEMGHCTIL
TVAHRLHTVMRNDKIIVMDRGRVAETGRPSELLSGPSRLSELVDETGPAT
AAHLRYLASLPRYETENGPKNNTTLEQQNQPNGRENRLLHIAPVPESNKS
LRETVRAAFLELRTALTEYDSKAWKEELMESNIEESQWKENLKAMVLKLA
MLANSLSIDGNDELHSSSSFGTGIPARSVDFLAEAIQDGDSRVEMPMRSE
RSSPVDSDSSTEFVPIAHERNKNAL*

spliced messenger RNA

>Gcaud2215.t1 ID=Gcaud2215.t1|Name=Gcaud2215.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=5028bp|location=Sequence derived from alignment at NODE_492_length_23814_cov_5.019981:9697..14831+ (Gracilaria caudata M_176_S67 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGCTTCTTCATCAGCTACCGCTCATACTCTGCACTCTGTACTTCAT
TTTTCGCCTCCTGACCGCCGACCCTTTCATTCCGAGACGTGCACGCACCC
GTTTCCCCTATGTGTCCGCCCTTGTCTTCCTCATCCCCATACCGCTTCTC
CCTCTTCTTCCCCACGTCCTGATAACTTCATTTGCGGATCGATTCTTCCT
GTTGCTTTCCTATGTGTTGGCTTCCTTTCTGGCCCTCAGATATGCCTTCG
CGGAACCTCATATGTCCCAGTTGTATCCTTATCCAGCCCATGCGTATCCG
CGTCTCCTTCTATGGCGCGTAGATGTTGTGCTCTATCTTCTCTTTCTCCC
TGTCATTGCCTTACTACAACAGGCCTCTTTGCTCACTCTAACCTTTTGCA
CCGCGTCTGCGATAACCACTACCACAATATTCCTAATCGAGCTCGTACGT
CGTTCTCAGAGCGCGCTTCCACATCAACTTTTCGCGCTTGCGTTTCAGCC
AGCCTCTTCAGCGTCTACCATCGAGCATGCACCGCCAACAGTTCGTCATG
CTTCTGCGCTTTCGCTTCTCTCCTTCGACTGGGTTACCAGCATTGTCGTC
ACCGGTCGCTCACGCGCCCTTGAATTTACCGACGTAATACCAATTTCTGA
ACGCTTCAACTGTCATACGTCGGGCAAACGCCGTTTCTCTCCATTCTGGC
GTGCAGAGCTAGAACGGCCGTACCCACGTCTGCTCAGAGCTCTGTTCCAT
GCCTTTGGTGCCAGATTCATGTTGGGCGGTTGTCTGAAGCTTATCAACGA
TGTCTTCTTGTTCGTGTCACCAATGCTGCTGAGATCTATCATATCTCATC
TTCAACATCGCTCTCAAGGTTACGAGACATCTGTCAAAGGATTTCTCCTG
GCTTGCGCTATGTTTGGCTCTTATTTTACTCAACTTCTCGTTTTCAACCA
GTACTTCAACGTCATGTCTACTATGCAAGCCCTGCTAAGGGGTGCAATTG
TAAGCGCAGTTTTTGAGAAAAGTTGTCGGCTTTCACCGGAGAGCCGGGCA
TTGTACACATCTGGTCAGATTCAGAACTTGATGTCAAATGACTCTCGTAT
GGTTTCCGATGTCGTGCTTTATCTGCACATGGTGTGGAGTTCTGTCGAAC
AGATAACTGTGGCCATGGTCCTACTTGTACAGCTTCTCGGATGGGGTCCA
ACCGCTGCTGGCGTTCTGTTTATCATGTCCAGCATGTTTATTCAGTCAAA
ACTGGTGGGCACCATCAAGAGCTATCGTGAAAAAGCGAGTGCCCGAACCG
ATGAACGAGTGAAATTCGTGGCAGAAGCTATCAAGGGAATCAAATTGGTT
AAGCTCTATGCTTGGGAGCTTTCTTTCGTTAAGCGCATTCTCGGCGCACG
AACGAGGGAGCTCGACCTCCTTCGAAAGATGGCCATCTTGGATGCATGGA
ACAGCGTTCTTGTAACCAGTCTGCCCACCGTGTTAACGATTATCGTCTTC
ACCGCTTATGCGCTTTTCGTTCATGAGCTCGATGCTGCGGTTGTTTTTCC
AGCGATCGCTCTCTTCAACGTAATCAGGCCCTCATTAATGTTCCTACCGA
ATATTCTCATTAGTACCGCACGTGCTGCAGCGTCTCTGAATAGGCTTCGC
AGCTTCCTGATTTGCGAGGAGCTCATTCCCCTTCATGAGGGCCATTATGC
CATGGATCGGGATTTGCTCGAGTTTAACAAGATCGACCTTGCGACTTCGA
ACGCTTCTTTCACATGGGATCCTTCGATTTCGCGAGCCTATCCGACGCTC
TCTGGTGTCACTTTCTGGATTCCTGAGGGCAAGTTGGTTGCTGTCGTCGG
ACCAACCGGGAGCGGGAAAAGTACTCTCCTAGCTGGACTTTTGGGGGAGG
TCCCCATTATTGACGGAGAAGCCGGTGTGCGTCAGGGTCGTTCCATATCC
TTTTGTGATCAAGTGCCGTTCATCCACAATGCGACTGTGAGGGACAACAT
ATTGTTTGGCAAGCCATACGATGAGGCTTCCTATCGTACAACGATTCGAG
TGTGCAACCTTCTTTCGGACTTGAAAATGCTTCCTGGTGGCGATCTCACA
GAGATTGGTGGAAGAGGTGTCAATTTGTCCGGCGGTCAGCGTGCTAGGGT
TGCCCTAGCCAGAGCCGTATATGCTCGTGCTGATATATGCCTTCTTGATG
ATCCGCTATGTGCCGTTGACGCTCACGTCGGAAAGTCAATATTCCAGAAC
TGTATCGCTTCGGAAATGCGGGGAACAACGAGGATTCTAACTACAAACCA
GATTCACTACGCAGCTGCGCCGGAAGTTGATATGGTCATCGTCGTCAAAA
ATGGCACTGTCGTTGAAGCAGGGCCGCGAAAAGAGCTTCTTTCATTAGAC
AGTGAATTCTCTAGTATGGTGAAGGCGGCTGGAGAACTAGGTGCCTCATC
AGAACCCAGTCATGCGGTGAACCATGCAAGGAATATTGAGTCCCGTTACC
GCCAACGGCAAAAGATCGAAGAAGAAGAATTGGACATTCAACAGACACTA
AACGCTGCAGAAAGAACAGTAACCGAAGCGAAAGAGACAACTTCTATTGT
TGACTCTGACAAGATCCCCGACTACGGTGCCATTGAAGCCGGGAGATTGA
CAAAGAAAGAGACCAAGCAGAAAGGCCGCGTGGAGTTCAAGCATTACAAG
ACATATCTCAGAGGGATGGGAATACGTTCATGGGTACCGGCTGTGTTACT
CTGTGCGACTGGAGCGCAATCAATGAGCCTCTGTGTGAACGTATGGCTCA
GTGACTGGAGCGATCAGAGAACCAGCGATAACACCTTTTTCCGCCTTCTC
GTCTTCTTTATTTTCGGGTTTTTCACAATACTAGTCGCTGGTATCGCGTC
GTTCTCCCTTCAGTTTGGCTCTATCCGTGCTTCTGTTCGTCTTCATGAGA
AGCTACTGCTCTCTGTATTTGGTGCACCAAGCTCTTTTTTCAATTCGACG
CCTGATGGTCGTCTCGTTAACAGATTCAACTCTGACTTGGATAAGATCGA
CTCATCTCTCGCAGCTACGTTACAATCCTTATTTCGTCTTGGTCTCAACC
TCGTCTTCACTCTGGGACTAATACTATGGGCGACACCATTGTTTATCCTT
GCCATGATTCCCATCGCTGCCGTTTGTCTTTATGTCCAGGAATTCTATCG
GAAGACAAGCGTAGACTTGCGTCGTCTTGAAGCGCTTGCGAGAAGTCCCT
TGTATTCGCATTTCAGTGAGACATTGGAAGGAGTAGTGACTATTCGTGCT
TTCGGGGACGTACCGAGAACGACCATGATTAACAGCCAATACACGGACTC
GCTCATCCAAACAACATACGCATCAACATATGCTAATCGGTGGCTCTCCG
TCCGCCTTGAAGGACTTGGGACAATTCTGATATTCAGCGCTACTTTACTT
GCAGTATTGACACCACCAGACAAGATTTCGGCAAGTATGGTTGGTTTGGT
GTTGTCGTATACCATGCAAATCTTGGGAGTTATGACATGGAGCGTTAGAC
AATTCACTGAAACCGAGTCGCAGCTGAGTGCCGTGGAACGAGTTGCGGAG
TATTCAGAGCCTCCGTTCCCGCAGGAAGAGAGAGGAGGGCTGGAGCAGTT
TATGAGAGATCAAAGTCGAAATTCAAACACCATTACGAGAAGCGAATCCA
CAGGATTAATCTCGAAGGAGACGGCAAGTAATTTAGCACAAAGTCTAACA
CCTCAAAGGTCTCGTTGGCCTCGTAGGGGTAAGATTGAATTCAAGGATGT
CGAAATGAAATACCGCGATGATTTAGACCCGGCCTTAAAGAAGGTTTCGT
TCACTGTTGAACCCGGGGAGCACGTTGGCATTGTGGGCAGAACTGGTGCA
GGCAAGAGTTCTGCCATTCAGTCCATCTTCAGACTGTACGAACTTAATAA
GGGTCGGATTCTTATAGACAACACAGACATATCGTCGATGCGCTTATTTG
ACGTTCGCTCGTCCCTGGGTATAATTCCACAAGAACCAGTTTGCTTTTCT
GGAACTATTCGCTCGAATCTGGACATGTTCGGAGACCATTCGGAAAAAGA
TGTTCAAAAAGCCTTTGATGCATGTGGACTGCAAGATACCATGAAAGCTA
AAGTCACCCTCGACTTTGAGGTGGCGGAGAATGGATCAAATTTAAGCGTC
GGACAAAGACAATTGCTTTGTCTAGGTAGGGCATTGCTGAAGGACAGTCA
AGTCCTCGTCCTTGATGAAGCCACTTCGAGCGTGTCGAACGCCACCGACC
AGAAGATACAGAAAACACTTCGAGATGAAATGGGACATTGTACTATATTA
ACTGTTGCACATCGTCTTCACACAGTGATGCGAAACGATAAAATTATCGT
GATGGATCGAGGACGTGTTGCTGAAACAGGTCGTCCCAGTGAGCTTCTAA
GCGGACCTTCTCGTCTTAGTGAGCTGGTGGATGAAACCGGACCAGCAACG
GCAGCACACTTGCGATACTTGGCTTCCTTACCTCGTTATGAAACGGAAAA
TGGTCCCAAGAATAACACCACCTTGGAACAGCAAAACCAACCAAATGGAA
GAGAGAATCGTTTGCTGCACATTGCTCCAGTTCCCGAGAGTAATAAGTCT
CTTCGTGAAACCGTCAGGGCAGCATTCTTAGAGTTAAGAACCGCACTCAC
TGAGTATGACTCCAAAGCTTGGAAAGAAGAGCTCATGGAGTCAAACATTG
AGGAGTCACAATGGAAAGAAAACTTGAAGGCCATGGTGTTGAAGCTTGCA
ATGCTTGCGAACTCTTTGTCTATTGATGGAAACGATGAGTTGCACAGCAG
TTCTAGTTTCGGCACAGGTATCCCAGCTCGTTCTGTGGATTTCTTGGCGG
AAGCAATTCAGGATGGTGATTCTCGTGTTGAAATGCCAATGCGCTCGGAA
AGGAGCTCCCCCGTAGATTCAGACTCTTCTACAGAGTTTGTTCCGATTGC
ACATGAACGCAATAAGAATGCCCTGTAA

protein sequence of Gcaud2215.t1

>Gcaud2215.t1 ID=Gcaud2215.t1|Name=Gcaud2215.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=1676bp
MALLHQLPLILCTLYFIFRLLTADPFIPRRARTRFPYVSALVFLIPIPLL
PLLPHVLITSFADRFFLLLSYVLASFLALRYAFAEPHMSQLYPYPAHAYP
RLLLWRVDVVLYLLFLPVIALLQQASLLTLTFCTASAITTTTIFLIELVR
RSQSALPHQLFALAFQPASSASTIEHAPPTVRHASALSLLSFDWVTSIVV
TGRSRALEFTDVIPISERFNCHTSGKRRFSPFWRAELERPYPRLLRALFH
AFGARFMLGGCLKLINDVFLFVSPMLLRSIISHLQHRSQGYETSVKGFLL
ACAMFGSYFTQLLVFNQYFNVMSTMQALLRGAIVSAVFEKSCRLSPESRA
LYTSGQIQNLMSNDSRMVSDVVLYLHMVWSSVEQITVAMVLLVQLLGWGP
TAAGVLFIMSSMFIQSKLVGTIKSYREKASARTDERVKFVAEAIKGIKLV
KLYAWELSFVKRILGARTRELDLLRKMAILDAWNSVLVTSLPTVLTIIVF
TAYALFVHELDAAVVFPAIALFNVIRPSLMFLPNILISTARAAASLNRLR
SFLICEELIPLHEGHYAMDRDLLEFNKIDLATSNASFTWDPSISRAYPTL
SGVTFWIPEGKLVAVVGPTGSGKSTLLAGLLGEVPIIDGEAGVRQGRSIS
FCDQVPFIHNATVRDNILFGKPYDEASYRTTIRVCNLLSDLKMLPGGDLT
EIGGRGVNLSGGQRARVALARAVYARADICLLDDPLCAVDAHVGKSIFQN
CIASEMRGTTRILTTNQIHYAAAPEVDMVIVVKNGTVVEAGPRKELLSLD
SEFSSMVKAAGELGASSEPSHAVNHARNIESRYRQRQKIEEEELDIQQTL
NAAERTVTEAKETTSIVDSDKIPDYGAIEAGRLTKKETKQKGRVEFKHYK
TYLRGMGIRSWVPAVLLCATGAQSMSLCVNVWLSDWSDQRTSDNTFFRLL
VFFIFGFFTILVAGIASFSLQFGSIRASVRLHEKLLLSVFGAPSSFFNST
PDGRLVNRFNSDLDKIDSSLAATLQSLFRLGLNLVFTLGLILWATPLFIL
AMIPIAAVCLYVQEFYRKTSVDLRRLEALARSPLYSHFSETLEGVVTIRA
FGDVPRTTMINSQYTDSLIQTTYASTYANRWLSVRLEGLGTILIFSATLL
AVLTPPDKISASMVGLVLSYTMQILGVMTWSVRQFTETESQLSAVERVAE
YSEPPFPQEERGGLEQFMRDQSRNSNTITRSESTGLISKETASNLAQSLT
PQRSRWPRRGKIEFKDVEMKYRDDLDPALKKVSFTVEPGEHVGIVGRTGA
GKSSAIQSIFRLYELNKGRILIDNTDISSMRLFDVRSSLGIIPQEPVCFS
GTIRSNLDMFGDHSEKDVQKAFDACGLQDTMKAKVTLDFEVAENGSNLSV
GQRQLLCLGRALLKDSQVLVLDEATSSVSNATDQKIQKTLRDEMGHCTIL
TVAHRLHTVMRNDKIIVMDRGRVAETGRPSELLSGPSRLSELVDETGPAT
AAHLRYLASLPRYETENGPKNNTTLEQQNQPNGRENRLLHIAPVPESNKS
LRETVRAAFLELRTALTEYDSKAWKEELMESNIEESQWKENLKAMVLKLA
MLANSLSIDGNDELHSSSSFGTGIPARSVDFLAEAIQDGDSRVEMPMRSE
RSSPVDSDSSTEFVPIAHERNKNAL*

mRNA from alignment at NODE_492_length_23814_cov_5.019981:9697..14831+

Legend: polypeptidestart_codonCDSexonintronstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

>Gcaud2215.t1 ID=Gcaud2215.t1|Name=Gcaud2215.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=5135bp|location=Sequence derived from alignment at NODE_492_length_23814_cov_5.019981:9697..14831+ (Gracilaria caudata M_176_S67 male)
ATGGCGCTTCTTCATCAGCTACCGCTCATACTCTGCACTCTGTACTTCAT
TTTTCGCCTCCTGACCGCCGACCCTTTCATTCCGAGACGTGCACGCACCC
GTTTCCCCTATGTGTCCGCCCTTGTCTTCCTCATCCCCATACCGCTTCTC
CCTCTTCTTCCCCACGTCCTGATAACTTCATTTGCGGATCGATTCTTCCT
GTTGCTTTCCTATGTGTTGGCTTCCTTTCTGGCCCTCAGATATGCCTTCG
CGGAACCTCATATGTCCCAGTTGTATCCTTATCCAGCCCATGCGTATCCG
CGTCTCCTTCTATGGCGCGTAGATGTTGTGCTCTATCTTCTCTTTCTCCC
TGTCATTGCCTTACTACAACAGGCCTCTTTGCTCACTCTAACCTTTTGCA
CCGCGTCTGCGATAACCACTACCACAATATTCCTAATCGAGCTCGTACGT
CGTTCTCAGAGCGCGCTTCCACATCAACTTTTCGCGCTTGCGTTTCAGCC
AGCCTCTTCAGCGTCTACCATCGAGCATGCACCGCCAACAGTTCGTCATG
CTTCTGCGCTTTCGCTTCTCTCCTTCGACTGGGTTACCAGCATTGTCGTC
ACCGGTCGCTCACGCGCCCTTGAATTTACCGACGTAATACCAATTTCTGA
ACGCTTCAACTGTCATACGTCGGGCAAACGCCGTTTCTCTCCATTCTGGC
GTGCAGAGCTAGAACGGCCGTACCCACGTCTGCTCAGAGCTCTGTTCCAT
GCCTTTGGTGCCAGATTCATGTTGGGCGGTTGTCTGAAGCTTATCAACGA
TGTCTTCTTGTTCGTGTCACCAATGCTGCTGAGATCTGTAAGTCCCTACC
TTAACTGCCGTGAGAAGAAACTGCCGTGATGAGGGTCATACCAAACGGCG
CCGCTTCATTATGCTGACATTCTATTCCATTTTTTTCTATTTAGATCATA
TCTCATCTTCAACATCGCTCTCAAGGTTACGAGACATCTGTCAAAGGATT
TCTCCTGGCTTGCGCTATGTTTGGCTCTTATTTTACTCAACTTCTCGTTT
TCAACCAGTACTTCAACGTCATGTCTACTATGCAAGCCCTGCTAAGGGGT
GCAATTGTAAGCGCAGTTTTTGAGAAAAGTTGTCGGCTTTCACCGGAGAG
CCGGGCATTGTACACATCTGGTCAGATTCAGAACTTGATGTCAAATGACT
CTCGTATGGTTTCCGATGTCGTGCTTTATCTGCACATGGTGTGGAGTTCT
GTCGAACAGATAACTGTGGCCATGGTCCTACTTGTACAGCTTCTCGGATG
GGGTCCAACCGCTGCTGGCGTTCTGTTTATCATGTCCAGCATGTTTATTC
AGTCAAAACTGGTGGGCACCATCAAGAGCTATCGTGAAAAAGCGAGTGCC
CGAACCGATGAACGAGTGAAATTCGTGGCAGAAGCTATCAAGGGAATCAA
ATTGGTTAAGCTCTATGCTTGGGAGCTTTCTTTCGTTAAGCGCATTCTCG
GCGCACGAACGAGGGAGCTCGACCTCCTTCGAAAGATGGCCATCTTGGAT
GCATGGAACAGCGTTCTTGTAACCAGTCTGCCCACCGTGTTAACGATTAT
CGTCTTCACCGCTTATGCGCTTTTCGTTCATGAGCTCGATGCTGCGGTTG
TTTTTCCAGCGATCGCTCTCTTCAACGTAATCAGGCCCTCATTAATGTTC
CTACCGAATATTCTCATTAGTACCGCACGTGCTGCAGCGTCTCTGAATAG
GCTTCGCAGCTTCCTGATTTGCGAGGAGCTCATTCCCCTTCATGAGGGCC
ATTATGCCATGGATCGGGATTTGCTCGAGTTTAACAAGATCGACCTTGCG
ACTTCGAACGCTTCTTTCACATGGGATCCTTCGATTTCGCGAGCCTATCC
GACGCTCTCTGGTGTCACTTTCTGGATTCCTGAGGGCAAGTTGGTTGCTG
TCGTCGGACCAACCGGGAGCGGGAAAAGTACTCTCCTAGCTGGACTTTTG
GGGGAGGTCCCCATTATTGACGGAGAAGCCGGTGTGCGTCAGGGTCGTTC
CATATCCTTTTGTGATCAAGTGCCGTTCATCCACAATGCGACTGTGAGGG
ACAACATATTGTTTGGCAAGCCATACGATGAGGCTTCCTATCGTACAACG
ATTCGAGTGTGCAACCTTCTTTCGGACTTGAAAATGCTTCCTGGTGGCGA
TCTCACAGAGATTGGTGGAAGAGGTGTCAATTTGTCCGGCGGTCAGCGTG
CTAGGGTTGCCCTAGCCAGAGCCGTATATGCTCGTGCTGATATATGCCTT
CTTGATGATCCGCTATGTGCCGTTGACGCTCACGTCGGAAAGTCAATATT
CCAGAACTGTATCGCTTCGGAAATGCGGGGAACAACGAGGATTCTAACTA
CAAACCAGATTCACTACGCAGCTGCGCCGGAAGTTGATATGGTCATCGTC
GTCAAAAATGGCACTGTCGTTGAAGCAGGGCCGCGAAAAGAGCTTCTTTC
ATTAGACAGTGAATTCTCTAGTATGGTGAAGGCGGCTGGAGAACTAGGTG
CCTCATCAGAACCCAGTCATGCGGTGAACCATGCAAGGAATATTGAGTCC
CGTTACCGCCAACGGCAAAAGATCGAAGAAGAAGAATTGGACATTCAACA
GACACTAAACGCTGCAGAAAGAACAGTAACCGAAGCGAAAGAGACAACTT
CTATTGTTGACTCTGACAAGATCCCCGACTACGGTGCCATTGAAGCCGGG
AGATTGACAAAGAAAGAGACCAAGCAGAAAGGCCGCGTGGAGTTCAAGCA
TTACAAGACATATCTCAGAGGGATGGGAATACGTTCATGGGTACCGGCTG
TGTTACTCTGTGCGACTGGAGCGCAATCAATGAGCCTCTGTGTGAACGTA
TGGCTCAGTGACTGGAGCGATCAGAGAACCAGCGATAACACCTTTTTCCG
CCTTCTCGTCTTCTTTATTTTCGGGTTTTTCACAATACTAGTCGCTGGTA
TCGCGTCGTTCTCCCTTCAGTTTGGCTCTATCCGTGCTTCTGTTCGTCTT
CATGAGAAGCTACTGCTCTCTGTATTTGGTGCACCAAGCTCTTTTTTCAA
TTCGACGCCTGATGGTCGTCTCGTTAACAGATTCAACTCTGACTTGGATA
AGATCGACTCATCTCTCGCAGCTACGTTACAATCCTTATTTCGTCTTGGT
CTCAACCTCGTCTTCACTCTGGGACTAATACTATGGGCGACACCATTGTT
TATCCTTGCCATGATTCCCATCGCTGCCGTTTGTCTTTATGTCCAGGAAT
TCTATCGGAAGACAAGCGTAGACTTGCGTCGTCTTGAAGCGCTTGCGAGA
AGTCCCTTGTATTCGCATTTCAGTGAGACATTGGAAGGAGTAGTGACTAT
TCGTGCTTTCGGGGACGTACCGAGAACGACCATGATTAACAGCCAATACA
CGGACTCGCTCATCCAAACAACATACGCATCAACATATGCTAATCGGTGG
CTCTCCGTCCGCCTTGAAGGACTTGGGACAATTCTGATATTCAGCGCTAC
TTTACTTGCAGTATTGACACCACCAGACAAGATTTCGGCAAGTATGGTTG
GTTTGGTGTTGTCGTATACCATGCAAATCTTGGGAGTTATGACATGGAGC
GTTAGACAATTCACTGAAACCGAGTCGCAGCTGAGTGCCGTGGAACGAGT
TGCGGAGTATTCAGAGCCTCCGTTCCCGCAGGAAGAGAGAGGAGGGCTGG
AGCAGTTTATGAGAGATCAAAGTCGAAATTCAAACACCATTACGAGAAGC
GAATCCACAGGATTAATCTCGAAGGAGACGGCAAGTAATTTAGCACAAAG
TCTAACACCTCAAAGGTCTCGTTGGCCTCGTAGGGGTAAGATTGAATTCA
AGGATGTCGAAATGAAATACCGCGATGATTTAGACCCGGCCTTAAAGAAG
GTTTCGTTCACTGTTGAACCCGGGGAGCACGTTGGCATTGTGGGCAGAAC
TGGTGCAGGCAAGAGTTCTGCCATTCAGTCCATCTTCAGACTGTACGAAC
TTAATAAGGGTCGGATTCTTATAGACAACACAGACATATCGTCGATGCGC
TTATTTGACGTTCGCTCGTCCCTGGGTATAATTCCACAAGAACCAGTTTG
CTTTTCTGGAACTATTCGCTCGAATCTGGACATGTTCGGAGACCATTCGG
AAAAAGATGTTCAAAAAGCCTTTGATGCATGTGGACTGCAAGATACCATG
AAAGCTAAAGTCACCCTCGACTTTGAGGTGGCGGAGAATGGATCAAATTT
AAGCGTCGGACAAAGACAATTGCTTTGTCTAGGTAGGGCATTGCTGAAGG
ACAGTCAAGTCCTCGTCCTTGATGAAGCCACTTCGAGCGTGTCGAACGCC
ACCGACCAGAAGATACAGAAAACACTTCGAGATGAAATGGGACATTGTAC
TATATTAACTGTTGCACATCGTCTTCACACAGTGATGCGAAACGATAAAA
TTATCGTGATGGATCGAGGACGTGTTGCTGAAACAGGTCGTCCCAGTGAG
CTTCTAAGCGGACCTTCTCGTCTTAGTGAGCTGGTGGATGAAACCGGACC
AGCAACGGCAGCACACTTGCGATACTTGGCTTCCTTACCTCGTTATGAAA
CGGAAAATGGTCCCAAGAATAACACCACCTTGGAACAGCAAAACCAACCA
AATGGAAGAGAGAATCGTTTGCTGCACATTGCTCCAGTTCCCGAGAGTAA
TAAGTCTCTTCGTGAAACCGTCAGGGCAGCATTCTTAGAGTTAAGAACCG
CACTCACTGAGTATGACTCCAAAGCTTGGAAAGAAGAGCTCATGGAGTCA
AACATTGAGGAGTCACAATGGAAAGAAAACTTGAAGGCCATGGTGTTGAA
GCTTGCAATGCTTGCGAACTCTTTGTCTATTGATGGAAACGATGAGTTGC
ACAGCAGTTCTAGTTTCGGCACAGGTATCCCAGCTCGTTCTGTGGATTTC
TTGGCGGAAGCAATTCAGGATGGTGATTCTCGTGTTGAAATGCCAATGCG
CTCGGAAAGGAGCTCCCCCGTAGATTCAGACTCTTCTACAGAGTTTGTTC
CGATTGCACATGAACGCAATAAGAATGCCCTGTAA

Coding sequence (CDS) from alignment at NODE_492_length_23814_cov_5.019981:9697..14831+

>Gcaud2215.t1 ID=Gcaud2215.t1|Name=Gcaud2215.t1|organism=Gracilaria caudata M_176_S67 male|type=CDS|length=5028bp|location=Sequence derived from alignment at NODE_492_length_23814_cov_5.019981:9697..14831+ (Gracilaria caudata M_176_S67 male)
ATGGCGCTTCTTCATCAGCTACCGCTCATACTCTGCACTCTGTACTTCAT
TTTTCGCCTCCTGACCGCCGACCCTTTCATTCCGAGACGTGCACGCACCC
GTTTCCCCTATGTGTCCGCCCTTGTCTTCCTCATCCCCATACCGCTTCTC
CCTCTTCTTCCCCACGTCCTGATAACTTCATTTGCGGATCGATTCTTCCT
GTTGCTTTCCTATGTGTTGGCTTCCTTTCTGGCCCTCAGATATGCCTTCG
CGGAACCTCATATGTCCCAGTTGTATCCTTATCCAGCCCATGCGTATCCG
CGTCTCCTTCTATGGCGCGTAGATGTTGTGCTCTATCTTCTCTTTCTCCC
TGTCATTGCCTTACTACAACAGGCCTCTTTGCTCACTCTAACCTTTTGCA
CCGCGTCTGCGATAACCACTACCACAATATTCCTAATCGAGCTCGTACGT
CGTTCTCAGAGCGCGCTTCCACATCAACTTTTCGCGCTTGCGTTTCAGCC
AGCCTCTTCAGCGTCTACCATCGAGCATGCACCGCCAACAGTTCGTCATG
CTTCTGCGCTTTCGCTTCTCTCCTTCGACTGGGTTACCAGCATTGTCGTC
ACCGGTCGCTCACGCGCCCTTGAATTTACCGACGTAATACCAATTTCTGA
ACGCTTCAACTGTCATACGTCGGGCAAACGCCGTTTCTCTCCATTCTGGC
GTGCAGAGCTAGAACGGCCGTACCCACGTCTGCTCAGAGCTCTGTTCCAT
GCCTTTGGTGCCAGATTCATGTTGGGCGGTTGTCTGAAGCTTATCAACGA
TGTCTTCTTGTTCGTGTCACCAATGCTGCTGAGATCTATCATATCTCATC
TTCAACATCGCTCTCAAGGTTACGAGACATCTGTCAAAGGATTTCTCCTG
GCTTGCGCTATGTTTGGCTCTTATTTTACTCAACTTCTCGTTTTCAACCA
GTACTTCAACGTCATGTCTACTATGCAAGCCCTGCTAAGGGGTGCAATTG
TAAGCGCAGTTTTTGAGAAAAGTTGTCGGCTTTCACCGGAGAGCCGGGCA
TTGTACACATCTGGTCAGATTCAGAACTTGATGTCAAATGACTCTCGTAT
GGTTTCCGATGTCGTGCTTTATCTGCACATGGTGTGGAGTTCTGTCGAAC
AGATAACTGTGGCCATGGTCCTACTTGTACAGCTTCTCGGATGGGGTCCA
ACCGCTGCTGGCGTTCTGTTTATCATGTCCAGCATGTTTATTCAGTCAAA
ACTGGTGGGCACCATCAAGAGCTATCGTGAAAAAGCGAGTGCCCGAACCG
ATGAACGAGTGAAATTCGTGGCAGAAGCTATCAAGGGAATCAAATTGGTT
AAGCTCTATGCTTGGGAGCTTTCTTTCGTTAAGCGCATTCTCGGCGCACG
AACGAGGGAGCTCGACCTCCTTCGAAAGATGGCCATCTTGGATGCATGGA
ACAGCGTTCTTGTAACCAGTCTGCCCACCGTGTTAACGATTATCGTCTTC
ACCGCTTATGCGCTTTTCGTTCATGAGCTCGATGCTGCGGTTGTTTTTCC
AGCGATCGCTCTCTTCAACGTAATCAGGCCCTCATTAATGTTCCTACCGA
ATATTCTCATTAGTACCGCACGTGCTGCAGCGTCTCTGAATAGGCTTCGC
AGCTTCCTGATTTGCGAGGAGCTCATTCCCCTTCATGAGGGCCATTATGC
CATGGATCGGGATTTGCTCGAGTTTAACAAGATCGACCTTGCGACTTCGA
ACGCTTCTTTCACATGGGATCCTTCGATTTCGCGAGCCTATCCGACGCTC
TCTGGTGTCACTTTCTGGATTCCTGAGGGCAAGTTGGTTGCTGTCGTCGG
ACCAACCGGGAGCGGGAAAAGTACTCTCCTAGCTGGACTTTTGGGGGAGG
TCCCCATTATTGACGGAGAAGCCGGTGTGCGTCAGGGTCGTTCCATATCC
TTTTGTGATCAAGTGCCGTTCATCCACAATGCGACTGTGAGGGACAACAT
ATTGTTTGGCAAGCCATACGATGAGGCTTCCTATCGTACAACGATTCGAG
TGTGCAACCTTCTTTCGGACTTGAAAATGCTTCCTGGTGGCGATCTCACA
GAGATTGGTGGAAGAGGTGTCAATTTGTCCGGCGGTCAGCGTGCTAGGGT
TGCCCTAGCCAGAGCCGTATATGCTCGTGCTGATATATGCCTTCTTGATG
ATCCGCTATGTGCCGTTGACGCTCACGTCGGAAAGTCAATATTCCAGAAC
TGTATCGCTTCGGAAATGCGGGGAACAACGAGGATTCTAACTACAAACCA
GATTCACTACGCAGCTGCGCCGGAAGTTGATATGGTCATCGTCGTCAAAA
ATGGCACTGTCGTTGAAGCAGGGCCGCGAAAAGAGCTTCTTTCATTAGAC
AGTGAATTCTCTAGTATGGTGAAGGCGGCTGGAGAACTAGGTGCCTCATC
AGAACCCAGTCATGCGGTGAACCATGCAAGGAATATTGAGTCCCGTTACC
GCCAACGGCAAAAGATCGAAGAAGAAGAATTGGACATTCAACAGACACTA
AACGCTGCAGAAAGAACAGTAACCGAAGCGAAAGAGACAACTTCTATTGT
TGACTCTGACAAGATCCCCGACTACGGTGCCATTGAAGCCGGGAGATTGA
CAAAGAAAGAGACCAAGCAGAAAGGCCGCGTGGAGTTCAAGCATTACAAG
ACATATCTCAGAGGGATGGGAATACGTTCATGGGTACCGGCTGTGTTACT
CTGTGCGACTGGAGCGCAATCAATGAGCCTCTGTGTGAACGTATGGCTCA
GTGACTGGAGCGATCAGAGAACCAGCGATAACACCTTTTTCCGCCTTCTC
GTCTTCTTTATTTTCGGGTTTTTCACAATACTAGTCGCTGGTATCGCGTC
GTTCTCCCTTCAGTTTGGCTCTATCCGTGCTTCTGTTCGTCTTCATGAGA
AGCTACTGCTCTCTGTATTTGGTGCACCAAGCTCTTTTTTCAATTCGACG
CCTGATGGTCGTCTCGTTAACAGATTCAACTCTGACTTGGATAAGATCGA
CTCATCTCTCGCAGCTACGTTACAATCCTTATTTCGTCTTGGTCTCAACC
TCGTCTTCACTCTGGGACTAATACTATGGGCGACACCATTGTTTATCCTT
GCCATGATTCCCATCGCTGCCGTTTGTCTTTATGTCCAGGAATTCTATCG
GAAGACAAGCGTAGACTTGCGTCGTCTTGAAGCGCTTGCGAGAAGTCCCT
TGTATTCGCATTTCAGTGAGACATTGGAAGGAGTAGTGACTATTCGTGCT
TTCGGGGACGTACCGAGAACGACCATGATTAACAGCCAATACACGGACTC
GCTCATCCAAACAACATACGCATCAACATATGCTAATCGGTGGCTCTCCG
TCCGCCTTGAAGGACTTGGGACAATTCTGATATTCAGCGCTACTTTACTT
GCAGTATTGACACCACCAGACAAGATTTCGGCAAGTATGGTTGGTTTGGT
GTTGTCGTATACCATGCAAATCTTGGGAGTTATGACATGGAGCGTTAGAC
AATTCACTGAAACCGAGTCGCAGCTGAGTGCCGTGGAACGAGTTGCGGAG
TATTCAGAGCCTCCGTTCCCGCAGGAAGAGAGAGGAGGGCTGGAGCAGTT
TATGAGAGATCAAAGTCGAAATTCAAACACCATTACGAGAAGCGAATCCA
CAGGATTAATCTCGAAGGAGACGGCAAGTAATTTAGCACAAAGTCTAACA
CCTCAAAGGTCTCGTTGGCCTCGTAGGGGTAAGATTGAATTCAAGGATGT
CGAAATGAAATACCGCGATGATTTAGACCCGGCCTTAAAGAAGGTTTCGT
TCACTGTTGAACCCGGGGAGCACGTTGGCATTGTGGGCAGAACTGGTGCA
GGCAAGAGTTCTGCCATTCAGTCCATCTTCAGACTGTACGAACTTAATAA
GGGTCGGATTCTTATAGACAACACAGACATATCGTCGATGCGCTTATTTG
ACGTTCGCTCGTCCCTGGGTATAATTCCACAAGAACCAGTTTGCTTTTCT
GGAACTATTCGCTCGAATCTGGACATGTTCGGAGACCATTCGGAAAAAGA
TGTTCAAAAAGCCTTTGATGCATGTGGACTGCAAGATACCATGAAAGCTA
AAGTCACCCTCGACTTTGAGGTGGCGGAGAATGGATCAAATTTAAGCGTC
GGACAAAGACAATTGCTTTGTCTAGGTAGGGCATTGCTGAAGGACAGTCA
AGTCCTCGTCCTTGATGAAGCCACTTCGAGCGTGTCGAACGCCACCGACC
AGAAGATACAGAAAACACTTCGAGATGAAATGGGACATTGTACTATATTA
ACTGTTGCACATCGTCTTCACACAGTGATGCGAAACGATAAAATTATCGT
GATGGATCGAGGACGTGTTGCTGAAACAGGTCGTCCCAGTGAGCTTCTAA
GCGGACCTTCTCGTCTTAGTGAGCTGGTGGATGAAACCGGACCAGCAACG
GCAGCACACTTGCGATACTTGGCTTCCTTACCTCGTTATGAAACGGAAAA
TGGTCCCAAGAATAACACCACCTTGGAACAGCAAAACCAACCAAATGGAA
GAGAGAATCGTTTGCTGCACATTGCTCCAGTTCCCGAGAGTAATAAGTCT
CTTCGTGAAACCGTCAGGGCAGCATTCTTAGAGTTAAGAACCGCACTCAC
TGAGTATGACTCCAAAGCTTGGAAAGAAGAGCTCATGGAGTCAAACATTG
AGGAGTCACAATGGAAAGAAAACTTGAAGGCCATGGTGTTGAAGCTTGCA
ATGCTTGCGAACTCTTTGTCTATTGATGGAAACGATGAGTTGCACAGCAG
TTCTAGTTTCGGCACAGGTATCCCAGCTCGTTCTGTGGATTTCTTGGCGG
AAGCAATTCAGGATGGTGATTCTCGTGTTGAAATGCCAATGCGCTCGGAA
AGGAGCTCCCCCGTAGATTCAGACTCTTCTACAGAGTTTGTTCCGATTGC
ACATGAACGCAATAAGAATGCCCTGTAA