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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 130081.XP_005702844.1 |
| PFAMs | Abhydrolase_6,DAGAT,Hydrolase_4 |
| Max annot lvl | 2759|Eukaryota |
| GOs | GO:0003674,GO:0003824,GO:0004144,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006629,GO:0006638,GO:0006639,GO:0006641,GO:0006720,GO:0006721,GO:0008150,GO:0008152,GO:0008374,GO:0008610,GO:0009058,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0010287,GO:0016101,GO:0016411,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0019432,GO:0033306,GO:0034308,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046460,GO:0046463,GO:0046486,GO:0071704,GO:1901576,GO:1901615,GO:1903173 |
| Evalue | 5.33e-69 |
| EggNOG OGs | COG0204@1|root,2QQUD@2759|Eukaryota |
| Description | fatty alcohol metabolic process |
| COG category | I |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Gcaud1669.t1.stop1 | Gcaud1669.t1.stop1 | Gracilaria caudata M_176_S67 male | stop_codon | NODE_860_length_16952_cov_4.432299 6329..6331 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Gcaud1669.t1.start1 | Gcaud1669.t1.start1 | Gracilaria caudata M_176_S67 male | start_codon | NODE_860_length_16952_cov_4.432299 8879..8881 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gcaud1669.t1 ID=Gcaud1669.t1|Name=Gcaud1669.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=851bp MNPNVLGPHSRIRSRRVRPHSSKPARLPGYTLKFDIPGIPPEPVFANIQL DRRSEYGVQGVLHWISADEFKSIARSEGAVPFPLPDFSRVQHVTCVLADG TKVKARTIVFVPPPFSALITPQLRPSRRYVQTAIYGAEFHGIDTSYVDNV LRKIKIQNGPLGAFGLHAVQRPHLLDRPNPNERFGRPADEIYSPYSQIPE QVAPAVDKLRQTDEKVALRLVRLSGKPRTAYQRKLYYVPGIDGNGKGIVS QIKALEEEGVYDVSGVIYPPDNRQSIPEMASDILDLIKDDAGSDPVCVFG ESMGGMLALVCASQNKERQANQQPSISLELVTMLNPATSYSRSATRNLWG TLLSIGIPEDVYKGLLPYALFPFLLDFDSMGSNFTPELVPRLRKMLTSLS AISDVLPLRTMQWRINLLNSFYLSQEQYKSLSSSESGTKLAVIASVNDNL LPSFSELKRLERLIPGIHTMVLPYGGHAAAMDPRFNLAAFLRPFNARKTK SNGSEAKASEGLLRRRAALRKRFVSRAARRCEKFSRQELRTALDYVQTST REFSPVFIGEENIPAYDPNRPILFVSNHTIMGWLDTSHPVTRVLQSRGVL IRSLAHPYVLAGPIQSFPMAPTVDVETLKKFGVTTLTPNSLIENMSFGNW MLLFPGGAQEALKDPRTSKYELLWPQEPEFVRSCALFGAQIIPLSSVGTE DSVIPFLNASQVKTVIDTGSRLIGRPMDWSFAADSVRSWRGDSGEDRPMV PPLPLPTEADRTYYRFGKPIDVPEQCLTDEHVERMVYEQAREAVKEGIEI LLKRRVSDEYRSRAKRREFVRQFGGRVEPPAGQAWLWRRNGAYLDDDLQP * back to topspliced messenger RNA >Gcaud1669.t1 ID=Gcaud1669.t1|Name=Gcaud1669.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=2553bp|location=Sequence derived from alignment at NODE_860_length_16952_cov_4.432299:6329..8881- (Gracilaria caudata M_176_S67 male)|Notes=Excludes all bases but those of type(s): exon.
ATGAACCCGAACGTACTTGGACCGCACTCCAGAATCCGTTCACGTCGCGT GAGACCTCACTCGTCGAAGCCCGCTCGTTTACCAGGGTACACTCTCAAGT TCGATATTCCAGGCATCCCACCAGAGCCGGTTTTCGCTAACATACAACTA GACCGTCGCAGTGAGTACGGTGTACAAGGTGTGTTACACTGGATATCGGC CGATGAGTTCAAGTCAATTGCACGCTCTGAGGGTGCTGTCCCGTTCCCGC TTCCCGACTTTTCGCGAGTACAACATGTCACGTGCGTACTTGCCGATGGC ACAAAAGTCAAAGCACGTACCATAGTTTTTGTACCACCGCCTTTCTCTGC GCTGATCACCCCGCAGTTGCGTCCGTCTCGTCGATATGTCCAGACTGCTA TCTACGGTGCTGAGTTTCACGGCATTGACACCTCGTATGTAGACAATGTG CTGCGAAAGATTAAGATTCAAAATGGTCCACTTGGAGCGTTTGGTCTACA TGCAGTGCAACGACCTCATCTTTTGGATCGACCCAATCCGAATGAAAGGT TTGGACGTCCTGCAGATGAAATTTACTCCCCCTACAGTCAGATTCCCGAA CAAGTTGCGCCCGCTGTGGACAAGCTGCGACAGACAGACGAGAAAGTTGC CTTGCGTTTAGTTCGACTTTCTGGAAAACCTCGCACTGCCTATCAGAGAA AGCTCTATTATGTCCCTGGGATTGACGGTAATGGTAAGGGTATAGTGAGC CAAATCAAAGCTTTGGAGGAAGAAGGCGTCTATGATGTATCAGGCGTCAT ATATCCGCCCGACAACCGTCAGTCAATCCCTGAGATGGCGTCAGACATTC TCGACCTTATCAAGGACGACGCTGGTTCAGACCCTGTCTGTGTCTTTGGA GAAAGCATGGGGGGCATGTTAGCGCTTGTGTGTGCAAGTCAGAACAAGGA AAGACAAGCAAACCAGCAGCCGTCCATAAGTCTAGAACTTGTTACGATGC TCAACCCTGCAACCAGCTACTCGCGCTCTGCGACGCGAAACCTGTGGGGT ACGCTGCTTTCCATCGGTATACCTGAGGATGTGTACAAAGGGCTTCTTCC GTATGCTCTCTTTCCATTTCTGCTGGACTTTGATTCTATGGGATCCAATT TTACACCAGAACTGGTTCCACGACTGCGAAAGATGCTGACAAGTCTTAGT GCGATTTCTGACGTACTCCCGTTGCGCACAATGCAATGGCGTATCAATTT GTTGAACAGCTTCTATCTATCGCAAGAGCAGTACAAATCACTATCGAGCT CGGAAAGCGGCACAAAACTGGCTGTGATAGCGTCCGTGAATGATAACCTT CTTCCAAGCTTTTCGGAATTGAAGAGATTGGAACGACTTATCCCTGGGAT ACATACCATGGTGTTGCCCTACGGGGGCCACGCGGCAGCAATGGATCCAA GATTCAATCTCGCTGCGTTCCTTCGGCCATTCAATGCGAGGAAAACCAAG TCGAATGGTTCGGAAGCGAAGGCGAGTGAAGGGTTGCTCCGGCGTCGGGC TGCGTTGCGCAAACGCTTCGTTTCCCGTGCTGCGCGAAGATGCGAAAAGT TCTCTCGACAAGAGCTGAGAACTGCACTGGATTATGTGCAGACGAGCACG AGGGAGTTTTCACCTGTGTTCATCGGAGAGGAGAATATCCCAGCATATGA CCCGAACAGACCGATTCTGTTTGTGAGCAACCACACTATCATGGGGTGGC TGGATACGTCGCATCCTGTGACTCGTGTGTTGCAGTCACGGGGGGTGTTG ATCAGGTCCTTGGCACACCCGTATGTACTTGCCGGTCCAATTCAGTCATT CCCGATGGCGCCCACGGTTGACGTGGAAACTTTGAAGAAGTTTGGGGTGA CTACGCTGACGCCCAACTCACTGATTGAAAACATGTCGTTCGGAAATTGG ATGCTGCTATTTCCAGGCGGCGCGCAAGAGGCGCTCAAGGACCCGCGAAC AAGCAAGTACGAACTGCTGTGGCCGCAAGAGCCCGAGTTCGTGCGGAGCT GCGCGTTGTTCGGCGCGCAAATCATCCCTCTGTCATCGGTGGGCACGGAA GATTCGGTCATCCCGTTTTTGAACGCGTCGCAAGTGAAAACGGTGATCGA CACAGGCAGTAGGTTGATAGGACGACCAATGGACTGGAGCTTTGCGGCCG ATTCTGTGCGGTCGTGGCGCGGCGACAGCGGAGAAGATAGGCCAATGGTT CCACCGCTGCCACTCCCGACGGAGGCGGATCGCACGTACTACCGCTTCGG TAAGCCCATCGACGTGCCCGAGCAGTGTCTGACGGACGAGCACGTGGAAC GGATGGTGTACGAGCAGGCGAGAGAGGCGGTGAAGGAGGGCATAGAGATT CTGCTGAAACGAAGGGTGAGCGATGAGTATCGGTCACGCGCGAAGCGGCG CGAATTTGTGCGCCAGTTTGGCGGCCGCGTGGAGCCGCCGGCGGGGCAGG CGTGGCTGTGGAGGCGCAACGGCGCGTATCTTGACGACGATTTGCAGCCG TGA back to topprotein sequence of Gcaud1669.t1 >Gcaud1669.t1 ID=Gcaud1669.t1|Name=Gcaud1669.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=851bp
MNPNVLGPHSRIRSRRVRPHSSKPARLPGYTLKFDIPGIPPEPVFANIQL DRRSEYGVQGVLHWISADEFKSIARSEGAVPFPLPDFSRVQHVTCVLADG TKVKARTIVFVPPPFSALITPQLRPSRRYVQTAIYGAEFHGIDTSYVDNV LRKIKIQNGPLGAFGLHAVQRPHLLDRPNPNERFGRPADEIYSPYSQIPE QVAPAVDKLRQTDEKVALRLVRLSGKPRTAYQRKLYYVPGIDGNGKGIVS QIKALEEEGVYDVSGVIYPPDNRQSIPEMASDILDLIKDDAGSDPVCVFG ESMGGMLALVCASQNKERQANQQPSISLELVTMLNPATSYSRSATRNLWG TLLSIGIPEDVYKGLLPYALFPFLLDFDSMGSNFTPELVPRLRKMLTSLS AISDVLPLRTMQWRINLLNSFYLSQEQYKSLSSSESGTKLAVIASVNDNL LPSFSELKRLERLIPGIHTMVLPYGGHAAAMDPRFNLAAFLRPFNARKTK SNGSEAKASEGLLRRRAALRKRFVSRAARRCEKFSRQELRTALDYVQTST REFSPVFIGEENIPAYDPNRPILFVSNHTIMGWLDTSHPVTRVLQSRGVL IRSLAHPYVLAGPIQSFPMAPTVDVETLKKFGVTTLTPNSLIENMSFGNW MLLFPGGAQEALKDPRTSKYELLWPQEPEFVRSCALFGAQIIPLSSVGTE DSVIPFLNASQVKTVIDTGSRLIGRPMDWSFAADSVRSWRGDSGEDRPMV PPLPLPTEADRTYYRFGKPIDVPEQCLTDEHVERMVYEQAREAVKEGIEI LLKRRVSDEYRSRAKRREFVRQFGGRVEPPAGQAWLWRRNGAYLDDDLQP * back to topmRNA from alignment at NODE_860_length_16952_cov_4.432299:6329..8881- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gcaud1669.t1 ID=Gcaud1669.t1|Name=Gcaud1669.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=2553bp|location=Sequence derived from alignment at NODE_860_length_16952_cov_4.432299:6329..8881- (Gracilaria caudata M_176_S67 male) ATGAACCCGAACGTACTTGGACCGCACTCCAGAATCCGTTCACGTCGCGT
GAGACCTCACTCGTCGAAGCCCGCTCGTTTACCAGGGTACACTCTCAAGT
TCGATATTCCAGGCATCCCACCAGAGCCGGTTTTCGCTAACATACAACTA
GACCGTCGCAGTGAGTACGGTGTACAAGGTGTGTTACACTGGATATCGGC
CGATGAGTTCAAGTCAATTGCACGCTCTGAGGGTGCTGTCCCGTTCCCGC
TTCCCGACTTTTCGCGAGTACAACATGTCACGTGCGTACTTGCCGATGGC
ACAAAAGTCAAAGCACGTACCATAGTTTTTGTACCACCGCCTTTCTCTGC
GCTGATCACCCCGCAGTTGCGTCCGTCTCGTCGATATGTCCAGACTGCTA
TCTACGGTGCTGAGTTTCACGGCATTGACACCTCGTATGTAGACAATGTG
CTGCGAAAGATTAAGATTCAAAATGGTCCACTTGGAGCGTTTGGTCTACA
TGCAGTGCAACGACCTCATCTTTTGGATCGACCCAATCCGAATGAAAGGT
TTGGACGTCCTGCAGATGAAATTTACTCCCCCTACAGTCAGATTCCCGAA
CAAGTTGCGCCCGCTGTGGACAAGCTGCGACAGACAGACGAGAAAGTTGC
CTTGCGTTTAGTTCGACTTTCTGGAAAACCTCGCACTGCCTATCAGAGAA
AGCTCTATTATGTCCCTGGGATTGACGGTAATGGTAAGGGTATAGTGAGC
CAAATCAAAGCTTTGGAGGAAGAAGGCGTCTATGATGTATCAGGCGTCAT
ATATCCGCCCGACAACCGTCAGTCAATCCCTGAGATGGCGTCAGACATTC
TCGACCTTATCAAGGACGACGCTGGTTCAGACCCTGTCTGTGTCTTTGGA
GAAAGCATGGGGGGCATGTTAGCGCTTGTGTGTGCAAGTCAGAACAAGGA
AAGACAAGCAAACCAGCAGCCGTCCATAAGTCTAGAACTTGTTACGATGC
TCAACCCTGCAACCAGCTACTCGCGCTCTGCGACGCGAAACCTGTGGGGT
ACGCTGCTTTCCATCGGTATACCTGAGGATGTGTACAAAGGGCTTCTTCC
GTATGCTCTCTTTCCATTTCTGCTGGACTTTGATTCTATGGGATCCAATT
TTACACCAGAACTGGTTCCACGACTGCGAAAGATGCTGACAAGTCTTAGT
GCGATTTCTGACGTACTCCCGTTGCGCACAATGCAATGGCGTATCAATTT
GTTGAACAGCTTCTATCTATCGCAAGAGCAGTACAAATCACTATCGAGCT
CGGAAAGCGGCACAAAACTGGCTGTGATAGCGTCCGTGAATGATAACCTT
CTTCCAAGCTTTTCGGAATTGAAGAGATTGGAACGACTTATCCCTGGGAT
ACATACCATGGTGTTGCCCTACGGGGGCCACGCGGCAGCAATGGATCCAA
GATTCAATCTCGCTGCGTTCCTTCGGCCATTCAATGCGAGGAAAACCAAG
TCGAATGGTTCGGAAGCGAAGGCGAGTGAAGGGTTGCTCCGGCGTCGGGC
TGCGTTGCGCAAACGCTTCGTTTCCCGTGCTGCGCGAAGATGCGAAAAGT
TCTCTCGACAAGAGCTGAGAACTGCACTGGATTATGTGCAGACGAGCACG
AGGGAGTTTTCACCTGTGTTCATCGGAGAGGAGAATATCCCAGCATATGA
CCCGAACAGACCGATTCTGTTTGTGAGCAACCACACTATCATGGGGTGGC
TGGATACGTCGCATCCTGTGACTCGTGTGTTGCAGTCACGGGGGGTGTTG
ATCAGGTCCTTGGCACACCCGTATGTACTTGCCGGTCCAATTCAGTCATT
CCCGATGGCGCCCACGGTTGACGTGGAAACTTTGAAGAAGTTTGGGGTGA
CTACGCTGACGCCCAACTCACTGATTGAAAACATGTCGTTCGGAAATTGG
ATGCTGCTATTTCCAGGCGGCGCGCAAGAGGCGCTCAAGGACCCGCGAAC
AAGCAAGTACGAACTGCTGTGGCCGCAAGAGCCCGAGTTCGTGCGGAGCT
GCGCGTTGTTCGGCGCGCAAATCATCCCTCTGTCATCGGTGGGCACGGAA
GATTCGGTCATCCCGTTTTTGAACGCGTCGCAAGTGAAAACGGTGATCGA
CACAGGCAGTAGGTTGATAGGACGACCAATGGACTGGAGCTTTGCGGCCG
ATTCTGTGCGGTCGTGGCGCGGCGACAGCGGAGAAGATAGGCCAATGGTT
CCACCGCTGCCACTCCCGACGGAGGCGGATCGCACGTACTACCGCTTCGG
TAAGCCCATCGACGTGCCCGAGCAGTGTCTGACGGACGAGCACGTGGAAC
GGATGGTGTACGAGCAGGCGAGAGAGGCGGTGAAGGAGGGCATAGAGATT
CTGCTGAAACGAAGGGTGAGCGATGAGTATCGGTCACGCGCGAAGCGGCG
CGAATTTGTGCGCCAGTTTGGCGGCCGCGTGGAGCCGCCGGCGGGGCAGG
CGTGGCTGTGGAGGCGCAACGGCGCGTATCTTGACGACGATTTGCAGCCG
TGA back to topCoding sequence (CDS) from alignment at NODE_860_length_16952_cov_4.432299:6329..8881- >Gcaud1669.t1 ID=Gcaud1669.t1|Name=Gcaud1669.t1|organism=Gracilaria caudata M_176_S67 male|type=CDS|length=2553bp|location=Sequence derived from alignment at NODE_860_length_16952_cov_4.432299:6329..8881- (Gracilaria caudata M_176_S67 male) ATGAACCCGAACGTACTTGGACCGCACTCCAGAATCCGTTCACGTCGCGT GAGACCTCACTCGTCGAAGCCCGCTCGTTTACCAGGGTACACTCTCAAGT TCGATATTCCAGGCATCCCACCAGAGCCGGTTTTCGCTAACATACAACTA GACCGTCGCAGTGAGTACGGTGTACAAGGTGTGTTACACTGGATATCGGC CGATGAGTTCAAGTCAATTGCACGCTCTGAGGGTGCTGTCCCGTTCCCGC TTCCCGACTTTTCGCGAGTACAACATGTCACGTGCGTACTTGCCGATGGC ACAAAAGTCAAAGCACGTACCATAGTTTTTGTACCACCGCCTTTCTCTGC GCTGATCACCCCGCAGTTGCGTCCGTCTCGTCGATATGTCCAGACTGCTA TCTACGGTGCTGAGTTTCACGGCATTGACACCTCGTATGTAGACAATGTG CTGCGAAAGATTAAGATTCAAAATGGTCCACTTGGAGCGTTTGGTCTACA TGCAGTGCAACGACCTCATCTTTTGGATCGACCCAATCCGAATGAAAGGT TTGGACGTCCTGCAGATGAAATTTACTCCCCCTACAGTCAGATTCCCGAA CAAGTTGCGCCCGCTGTGGACAAGCTGCGACAGACAGACGAGAAAGTTGC CTTGCGTTTAGTTCGACTTTCTGGAAAACCTCGCACTGCCTATCAGAGAA AGCTCTATTATGTCCCTGGGATTGACGGTAATGGTAAGGGTATAGTGAGC CAAATCAAAGCTTTGGAGGAAGAAGGCGTCTATGATGTATCAGGCGTCAT ATATCCGCCCGACAACCGTCAGTCAATCCCTGAGATGGCGTCAGACATTC TCGACCTTATCAAGGACGACGCTGGTTCAGACCCTGTCTGTGTCTTTGGA GAAAGCATGGGGGGCATGTTAGCGCTTGTGTGTGCAAGTCAGAACAAGGA AAGACAAGCAAACCAGCAGCCGTCCATAAGTCTAGAACTTGTTACGATGC TCAACCCTGCAACCAGCTACTCGCGCTCTGCGACGCGAAACCTGTGGGGT ACGCTGCTTTCCATCGGTATACCTGAGGATGTGTACAAAGGGCTTCTTCC GTATGCTCTCTTTCCATTTCTGCTGGACTTTGATTCTATGGGATCCAATT TTACACCAGAACTGGTTCCACGACTGCGAAAGATGCTGACAAGTCTTAGT GCGATTTCTGACGTACTCCCGTTGCGCACAATGCAATGGCGTATCAATTT GTTGAACAGCTTCTATCTATCGCAAGAGCAGTACAAATCACTATCGAGCT CGGAAAGCGGCACAAAACTGGCTGTGATAGCGTCCGTGAATGATAACCTT CTTCCAAGCTTTTCGGAATTGAAGAGATTGGAACGACTTATCCCTGGGAT ACATACCATGGTGTTGCCCTACGGGGGCCACGCGGCAGCAATGGATCCAA GATTCAATCTCGCTGCGTTCCTTCGGCCATTCAATGCGAGGAAAACCAAG TCGAATGGTTCGGAAGCGAAGGCGAGTGAAGGGTTGCTCCGGCGTCGGGC TGCGTTGCGCAAACGCTTCGTTTCCCGTGCTGCGCGAAGATGCGAAAAGT TCTCTCGACAAGAGCTGAGAACTGCACTGGATTATGTGCAGACGAGCACG AGGGAGTTTTCACCTGTGTTCATCGGAGAGGAGAATATCCCAGCATATGA CCCGAACAGACCGATTCTGTTTGTGAGCAACCACACTATCATGGGGTGGC TGGATACGTCGCATCCTGTGACTCGTGTGTTGCAGTCACGGGGGGTGTTG ATCAGGTCCTTGGCACACCCGTATGTACTTGCCGGTCCAATTCAGTCATT CCCGATGGCGCCCACGGTTGACGTGGAAACTTTGAAGAAGTTTGGGGTGA CTACGCTGACGCCCAACTCACTGATTGAAAACATGTCGTTCGGAAATTGG ATGCTGCTATTTCCAGGCGGCGCGCAAGAGGCGCTCAAGGACCCGCGAAC AAGCAAGTACGAACTGCTGTGGCCGCAAGAGCCCGAGTTCGTGCGGAGCT GCGCGTTGTTCGGCGCGCAAATCATCCCTCTGTCATCGGTGGGCACGGAA GATTCGGTCATCCCGTTTTTGAACGCGTCGCAAGTGAAAACGGTGATCGA CACAGGCAGTAGGTTGATAGGACGACCAATGGACTGGAGCTTTGCGGCCG ATTCTGTGCGGTCGTGGCGCGGCGACAGCGGAGAAGATAGGCCAATGGTT CCACCGCTGCCACTCCCGACGGAGGCGGATCGCACGTACTACCGCTTCGG TAAGCCCATCGACGTGCCCGAGCAGTGTCTGACGGACGAGCACGTGGAAC GGATGGTGTACGAGCAGGCGAGAGAGGCGGTGAAGGAGGGCATAGAGATT CTGCTGAAACGAAGGGTGAGCGATGAGTATCGGTCACGCGCGAAGCGGCG CGAATTTGTGCGCCAGTTTGGCGGCCGCGTGGAGCCGCCGGCGGGGCAGG CGTGGCTGTGGAGGCGCAACGGCGCGTATCTTGACGACGATTTGCAGCCG TGA back to top
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