|
|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 130081.XP_005703605.1 |
| Preferred name | MPK17 |
| PFAMs | Pkinase |
| Max annot lvl | 2759|Eukaryota |
| KEGG rclass | RC00003,RC00060,RC00181,RC00496 |
| KEGG ko | ko:K04371,ko:K11430,ko:K13105,ko:K19603,ko:K20290,ko:K20538,ko:K22312 |
| KEGG Reaction | R03875,R03938,R04866,R04867 |
| KEGG Pathway | ko00310,ko01521,ko01522,ko01524,ko04010,ko04011,ko04012,ko04013,ko04014,ko04015,ko04016,ko04022,ko04024,ko04062,ko04066,ko04068,ko04071,ko04072,ko04114,ko04140,ko04150,ko04151,ko04210,ko04214,ko04218,ko04261,ko04270,ko04320,ko04350,ko04360,ko04370,ko04371,ko04380,ko04510,ko04520,ko04540,ko04550,ko04611,ko04620,ko04621,ko04650,ko04657,ko04658,ko04659,ko04660,ko04662,ko04664,ko04666,ko04668,ko04713,ko04720,ko04722,ko04723,ko04724,ko04725,ko04726,ko04730,ko04810,ko04910,ko04912,ko04914,ko04915,ko04916,ko04917,ko04919,ko04921,ko04926,ko04930,ko04933,ko04934,ko04960,ko05010,ko05020,ko05034,ko05131,ko05132,ko05133,ko05140,ko05142,ko05145,ko05152,ko05160,ko05161,ko05164,ko05165,ko05167,ko05200,ko05202,ko05203,ko05205,ko05206,ko05210,ko05211,ko05212,ko05213,ko05214,ko05215,ko05216,ko05218,ko05219,ko05220,ko05221,ko05223,ko05224,ko05225,ko05226,ko05230,ko05231,map00310,map01521,map01522,map01524,map04010,map04011,map04012,map04013,map04014,map04015,map04016,map04022,map04024,map04062,map04066,map04068,map04071,map04072,map04114,map04140,map04150,map04151,map04210,map04214,map04218,map04261,map04270,map04320,map04350,map04360,map04370,map04371,map04380,map04510,map04520,map04540,map04550,map04611,map04620,map04621,map04650,map04657,map04658,map04659,map04660,map04662,map04664,map04666,map04668,map04713,map04720,map04722,map04723,map04724,map04725,map04726,map04730,map04810,map04910,map04912,map04914,map04915,map04916,map04917,map04919,map04921,map04926,map04930,map04933,map04934,map04960,map05010,map05020,map05034,map05131,map05132,map05133,map05140,map05142,map05145,map05152,map05160,map05161,map05164,map05165,map05167,map05200,map05202,map05203,map05205,map05206,map05210,map05211,map05212,map05213,map05214,map05215,map05216,map05218,map05219,map05220,map05221,map05223,map05224,map05225,map05226,map05230,map05231 |
| KEGG Module | M00687 |
| GOs | GO:0000165,GO:0000226,GO:0000302,GO:0001101,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004707,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005773,GO:0005829,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0007010,GO:0007017,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009611,GO:0009636,GO:0009719,GO:0009725,GO:0009737,GO:0009738,GO:0009753,GO:0009755,GO:0009987,GO:0010033,GO:0010035,GO:0010468,GO:0010638,GO:0016020,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018105,GO:0018107,GO:0018193,GO:0018209,GO:0018210,GO:0019222,GO:0019538,GO:0023014,GO:0023052,GO:0030865,GO:0031122,GO:0032870,GO:0033043,GO:0033993,GO:0035556,GO:0036211,GO:0042221,GO:0042493,GO:0042542,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043622,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0046777,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051716,GO:0060255,GO:0065007,GO:0070887,GO:0071215,GO:0071229,GO:0071310,GO:0071396,GO:0071495,GO:0071704,GO:0071840,GO:0071944,GO:0097305,GO:0097306,GO:0097435,GO:0140096,GO:1900063,GO:1900064,GO:1901564,GO:1901700,GO:1901701 |
| Evalue | 2.15e-151 |
| EggNOG OGs | KOG0660@1|root,KOG0660@2759|Eukaryota |
| EC | 2.1.1.43,2.7.11.24,2.8.2.39 |
| Description | MAP kinase activity |
| COG category | H |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01001,ko03036,ko03041,ko04131,ko04147 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Gcaud10038.t2.start1 | Gcaud10038.t2.start1 | Gracilaria caudata M_176_S67 male | start_codon | NODE_32_length_72862_cov_4.436877 60411..60413 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Gcaud10038.t2.intron1 | Gcaud10038.t2.intron1 | Gracilaria caudata M_176_S67 male | intron | NODE_32_length_72862_cov_4.436877 60479..60835 + |
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Gcaud10038.t2.stop1 | Gcaud10038.t2.stop1 | Gracilaria caudata M_176_S67 male | stop_codon | NODE_32_length_72862_cov_4.436877 62610..62612 + |
Sequences
The following sequences are available for this feature:
mRNA sequence >Gcaud10038.t2 ID=Gcaud10038.t2|Name=Gcaud10038.t2|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=615bp MAGRERVPFDRYVDHRYLSLRDALQHPDALRQQLREKELQYQANLVQLAA QQHAYAMEQRKRERAKEERLRRLRIMRKEFFDAPLVEHRYTVQQIIGEGA SGVVCSAFDRQSQESVAVKRISRGFEKVPVSVRILRELKFLRLLRGHENI VEIKDILMPTSAKEFDDVFVVLELMPTDLNHVLRHKTELSPLHIQYFMFQ LMRGLYFLHSSGVFHRDLKPNNILIDQDCSLRICDFGLARANFDKAPEKA LWTDYVATRWYRAPELIMSHYTYSTAIDIWSAGCIMAEMIGNGKPLFPGK DGYDQLQLMTEIIGSPSEEAISKVRSQRVRDHFRALPRRSRRPFSQIFPH AEPDACSLLEWLLEFDPAKRPTALQALSHPYFRGFYTPEAEPAAKPISAD EFAFERQKLTPDAMRQLFLEEIALYHPAHAKDLLQNRDRNGGYDIPSQSD TFASAMRSVQEGIAQRKTSSMPKAKFKPFSDAYWAKRDGDKSRKKDAESS DTNMTERTVPVACQIVNGVQVGSSASWYGGGSRSDRRSMQMDARPSEPER TPELDAMAIEVEEAFGIVRVSSGGIVRGGSCGPQATYLPSGTGMDKDVGA GAHIVKEHDVSKCP* back to topspliced messenger RNA >Gcaud10038.t2 ID=Gcaud10038.t2|Name=Gcaud10038.t2|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=1845bp|location=Sequence derived from alignment at NODE_32_length_72862_cov_4.436877:60411..62612+ (Gracilaria caudata M_176_S67 male)|Notes=Excludes all bases but those of type(s): exon.
ATGGCCGGACGCGAGCGGGTGCCCTTTGATCGCTACGTCGATCATCGCTA CCTGTCGCTCAGGGACGCTCTGCAGCATCCCGACGCTCTGCGTCAGCAAC TGCGAGAGAAAGAACTTCAGTATCAGGCAAATCTAGTCCAGCTCGCCGCT CAGCAGCACGCTTATGCCATGGAACAACGTAAACGAGAGCGCGCTAAAGA GGAACGCCTCAGAAGGCTCCGTATCATGCGCAAGGAATTCTTCGATGCCC CCCTTGTTGAACATCGTTACACTGTCCAGCAGATTATCGGTGAGGGCGCT AGTGGAGTTGTGTGTAGTGCCTTTGACAGACAATCTCAAGAAAGTGTAGC CGTCAAACGGATCTCCAGAGGTTTTGAGAAAGTCCCTGTTTCTGTACGAA TTCTTCGTGAGCTCAAGTTTCTGCGTCTTCTACGTGGTCATGAGAACATT GTTGAGATTAAGGATATCCTGATGCCTACTTCCGCAAAGGAATTCGATGA TGTGTTCGTTGTGCTTGAGCTAATGCCTACTGATCTCAACCATGTGCTAC GCCACAAGACCGAACTCAGTCCGCTTCACATCCAGTACTTCATGTTCCAG CTCATGCGAGGCTTATACTTTCTTCATTCTTCCGGTGTGTTTCATCGTGA CCTCAAGCCTAACAATATTCTCATTGACCAAGACTGTTCTCTACGAATTT GCGACTTTGGTCTTGCACGCGCCAACTTTGACAAGGCTCCAGAAAAGGCC TTGTGGACCGATTACGTCGCAACCCGCTGGTATCGCGCTCCTGAACTCAT CATGTCTCACTACACCTACTCGACCGCCATCGACATCTGGTCGGCTGGTT GCATCATGGCCGAAATGATTGGTAATGGTAAACCTCTCTTCCCCGGAAAG GACGGTTACGACCAGTTGCAACTGATGACGGAGATCATCGGATCGCCATC AGAGGAGGCCATTTCAAAGGTACGAAGCCAGCGGGTGAGAGATCATTTCC GTGCGCTGCCGAGAAGGAGCCGCCGTCCGTTCTCGCAGATATTCCCTCAC GCCGAGCCAGACGCTTGCTCTCTGTTGGAGTGGTTACTGGAGTTTGACCC TGCAAAGAGGCCCACAGCCCTTCAGGCGCTCTCACATCCGTACTTTCGTG GCTTCTACACACCAGAAGCAGAACCCGCAGCAAAGCCGATCTCAGCCGAT GAATTTGCATTCGAACGGCAAAAGCTCACGCCTGATGCGATGCGGCAATT GTTCCTGGAGGAGATTGCGTTATATCATCCTGCACACGCAAAAGACCTTT TGCAAAATCGTGACAGGAATGGTGGCTATGATATTCCGAGTCAGTCCGAC ACATTTGCAAGCGCTATGCGCAGTGTTCAAGAAGGAATTGCACAGCGCAA GACTTCAAGCATGCCCAAAGCCAAGTTCAAGCCTTTCAGCGACGCATACT GGGCAAAACGAGATGGCGATAAGTCACGCAAAAAAGATGCGGAGTCCAGC GACACCAATATGACGGAGAGAACTGTTCCAGTTGCTTGTCAGATAGTGAA CGGAGTTCAGGTTGGTTCGTCAGCAAGTTGGTATGGCGGAGGTTCTCGCA GCGACAGAAGATCCATGCAGATGGATGCACGCCCTTCGGAACCGGAACGT ACGCCAGAACTCGATGCTATGGCTATAGAAGTGGAAGAAGCATTCGGCAT TGTGAGGGTATCGTCAGGAGGTATTGTTCGTGGGGGTTCCTGTGGCCCAC AAGCTACCTATCTCCCGAGTGGAACTGGGATGGACAAGGATGTCGGAGCT GGGGCTCATATTGTCAAGGAGCACGATGTATCGAAATGCCCGTGA back to topprotein sequence of Gcaud10038.t2 >Gcaud10038.t2 ID=Gcaud10038.t2|Name=Gcaud10038.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=615bp
MAGRERVPFDRYVDHRYLSLRDALQHPDALRQQLREKELQYQANLVQLAA QQHAYAMEQRKRERAKEERLRRLRIMRKEFFDAPLVEHRYTVQQIIGEGA SGVVCSAFDRQSQESVAVKRISRGFEKVPVSVRILRELKFLRLLRGHENI VEIKDILMPTSAKEFDDVFVVLELMPTDLNHVLRHKTELSPLHIQYFMFQ LMRGLYFLHSSGVFHRDLKPNNILIDQDCSLRICDFGLARANFDKAPEKA LWTDYVATRWYRAPELIMSHYTYSTAIDIWSAGCIMAEMIGNGKPLFPGK DGYDQLQLMTEIIGSPSEEAISKVRSQRVRDHFRALPRRSRRPFSQIFPH AEPDACSLLEWLLEFDPAKRPTALQALSHPYFRGFYTPEAEPAAKPISAD EFAFERQKLTPDAMRQLFLEEIALYHPAHAKDLLQNRDRNGGYDIPSQSD TFASAMRSVQEGIAQRKTSSMPKAKFKPFSDAYWAKRDGDKSRKKDAESS DTNMTERTVPVACQIVNGVQVGSSASWYGGGSRSDRRSMQMDARPSEPER TPELDAMAIEVEEAFGIVRVSSGGIVRGGSCGPQATYLPSGTGMDKDVGA GAHIVKEHDVSKCP* back to topmRNA from alignment at NODE_32_length_72862_cov_4.436877:60411..62612+ Legend: polypeptidestart_codonCDSexonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gcaud10038.t2 ID=Gcaud10038.t2|Name=Gcaud10038.t2|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=2202bp|location=Sequence derived from alignment at NODE_32_length_72862_cov_4.436877:60411..62612+ (Gracilaria caudata M_176_S67 male) ATGGCCGGACGCGAGCGGGTGCCCTTTGATCGCTACGTCGATCATCGCTA
CCTGTCGCTCAGGGACGCGTCGCTTCGTTACGCAccgccgccgcaaccgg
tgccgccgccgtcgcaccagctgctgccgTTTTCCCAGAAGCCAACGGCC
GCGTATCTTCATCACGCCcagcagcagcagcagcagcagcaacaacaaca
acaacaacagcaacagcagcagcagcTCcatcatcaccagcaccaaaact
acctcaacaaccatcatccacaccaccaacaccaacacACCCAAGTCCCC
AGCCATGTCAATCCGCATTCCCACTATTCTTCCAACCACACCTCATCCCT
GTCTTCTTCCCAGTACACCCTGCAGTCGGCTTACCAACAACAACAACAGC
ACCACCCTCAATACCCACATGTCAGTCTGCAGCATCCCGACGCTCTGCGT
CAGCAACTGCGAGAGAAAGAACTTCAGTATCAGGCAAATCTAGTCCAGCT
CGCCGCTCAGCAGCACGCTTATGCCATGGAACAACGTAAACGAGAGCGCG
CTAAAGAGGAACGCCTCAGAAGGCTCCGTATCATGCGCAAGGAATTCTTC
GATGCCCCCCTTGTTGAACATCGTTACACTGTCCAGCAGATTATCGGTGA
GGGCGCTAGTGGAGTTGTGTGTAGTGCCTTTGACAGACAATCTCAAGAAA
GTGTAGCCGTCAAACGGATCTCCAGAGGTTTTGAGAAAGTCCCTGTTTCT
GTACGAATTCTTCGTGAGCTCAAGTTTCTGCGTCTTCTACGTGGTCATGA
GAACATTGTTGAGATTAAGGATATCCTGATGCCTACTTCCGCAAAGGAAT
TCGATGATGTGTTCGTTGTGCTTGAGCTAATGCCTACTGATCTCAACCAT
GTGCTACGCCACAAGACCGAACTCAGTCCGCTTCACATCCAGTACTTCAT
GTTCCAGCTCATGCGAGGCTTATACTTTCTTCATTCTTCCGGTGTGTTTC
ATCGTGACCTCAAGCCTAACAATATTCTCATTGACCAAGACTGTTCTCTA
CGAATTTGCGACTTTGGTCTTGCACGCGCCAACTTTGACAAGGCTCCAGA
AAAGGCCTTGTGGACCGATTACGTCGCAACCCGCTGGTATCGCGCTCCTG
AACTCATCATGTCTCACTACACCTACTCGACCGCCATCGACATCTGGTCG
GCTGGTTGCATCATGGCCGAAATGATTGGTAATGGTAAACCTCTCTTCCC
CGGAAAGGACGGTTACGACCAGTTGCAACTGATGACGGAGATCATCGGAT
CGCCATCAGAGGAGGCCATTTCAAAGGTACGAAGCCAGCGGGTGAGAGAT
CATTTCCGTGCGCTGCCGAGAAGGAGCCGCCGTCCGTTCTCGCAGATATT
CCCTCACGCCGAGCCAGACGCTTGCTCTCTGTTGGAGTGGTTACTGGAGT
TTGACCCTGCAAAGAGGCCCACAGCCCTTCAGGCGCTCTCACATCCGTAC
TTTCGTGGCTTCTACACACCAGAAGCAGAACCCGCAGCAAAGCCGATCTC
AGCCGATGAATTTGCATTCGAACGGCAAAAGCTCACGCCTGATGCGATGC
GGCAATTGTTCCTGGAGGAGATTGCGTTATATCATCCTGCACACGCAAAA
GACCTTTTGCAAAATCGTGACAGGAATGGTGGCTATGATATTCCGAGTCA
GTCCGACACATTTGCAAGCGCTATGCGCAGTGTTCAAGAAGGAATTGCAC
AGCGCAAGACTTCAAGCATGCCCAAAGCCAAGTTCAAGCCTTTCAGCGAC
GCATACTGGGCAAAACGAGATGGCGATAAGTCACGCAAAAAAGATGCGGA
GTCCAGCGACACCAATATGACGGAGAGAACTGTTCCAGTTGCTTGTCAGA
TAGTGAACGGAGTTCAGGTTGGTTCGTCAGCAAGTTGGTATGGCGGAGGT
TCTCGCAGCGACAGAAGATCCATGCAGATGGATGCACGCCCTTCGGAACC
GGAACGTACGCCAGAACTCGATGCTATGGCTATAGAAGTGGAAGAAGCAT
TCGGCATTGTGAGGGTATCGTCAGGAGGTATTGTTCGTGGGGGTTCCTGT
GGCCCACAAGCTACCTATCTCCCGAGTGGAACTGGGATGGACAAGGATGT
CGGAGCTGGGGCTCATATTGTCAAGGAGCACGATGTATCGAAATGCCCGT
GA back to topCoding sequence (CDS) from alignment at NODE_32_length_72862_cov_4.436877:60411..62612+ >Gcaud10038.t2 ID=Gcaud10038.t2|Name=Gcaud10038.t2|organism=Gracilaria caudata M_176_S67 male|type=CDS|length=1845bp|location=Sequence derived from alignment at NODE_32_length_72862_cov_4.436877:60411..62612+ (Gracilaria caudata M_176_S67 male) ATGGCCGGACGCGAGCGGGTGCCCTTTGATCGCTACGTCGATCATCGCTA CCTGTCGCTCAGGGACGCTCTGCAGCATCCCGACGCTCTGCGTCAGCAAC TGCGAGAGAAAGAACTTCAGTATCAGGCAAATCTAGTCCAGCTCGCCGCT CAGCAGCACGCTTATGCCATGGAACAACGTAAACGAGAGCGCGCTAAAGA GGAACGCCTCAGAAGGCTCCGTATCATGCGCAAGGAATTCTTCGATGCCC CCCTTGTTGAACATCGTTACACTGTCCAGCAGATTATCGGTGAGGGCGCT AGTGGAGTTGTGTGTAGTGCCTTTGACAGACAATCTCAAGAAAGTGTAGC CGTCAAACGGATCTCCAGAGGTTTTGAGAAAGTCCCTGTTTCTGTACGAA TTCTTCGTGAGCTCAAGTTTCTGCGTCTTCTACGTGGTCATGAGAACATT GTTGAGATTAAGGATATCCTGATGCCTACTTCCGCAAAGGAATTCGATGA TGTGTTCGTTGTGCTTGAGCTAATGCCTACTGATCTCAACCATGTGCTAC GCCACAAGACCGAACTCAGTCCGCTTCACATCCAGTACTTCATGTTCCAG CTCATGCGAGGCTTATACTTTCTTCATTCTTCCGGTGTGTTTCATCGTGA CCTCAAGCCTAACAATATTCTCATTGACCAAGACTGTTCTCTACGAATTT GCGACTTTGGTCTTGCACGCGCCAACTTTGACAAGGCTCCAGAAAAGGCC TTGTGGACCGATTACGTCGCAACCCGCTGGTATCGCGCTCCTGAACTCAT CATGTCTCACTACACCTACTCGACCGCCATCGACATCTGGTCGGCTGGTT GCATCATGGCCGAAATGATTGGTAATGGTAAACCTCTCTTCCCCGGAAAG GACGGTTACGACCAGTTGCAACTGATGACGGAGATCATCGGATCGCCATC AGAGGAGGCCATTTCAAAGGTACGAAGCCAGCGGGTGAGAGATCATTTCC GTGCGCTGCCGAGAAGGAGCCGCCGTCCGTTCTCGCAGATATTCCCTCAC GCCGAGCCAGACGCTTGCTCTCTGTTGGAGTGGTTACTGGAGTTTGACCC TGCAAAGAGGCCCACAGCCCTTCAGGCGCTCTCACATCCGTACTTTCGTG GCTTCTACACACCAGAAGCAGAACCCGCAGCAAAGCCGATCTCAGCCGAT GAATTTGCATTCGAACGGCAAAAGCTCACGCCTGATGCGATGCGGCAATT GTTCCTGGAGGAGATTGCGTTATATCATCCTGCACACGCAAAAGACCTTT TGCAAAATCGTGACAGGAATGGTGGCTATGATATTCCGAGTCAGTCCGAC ACATTTGCAAGCGCTATGCGCAGTGTTCAAGAAGGAATTGCACAGCGCAA GACTTCAAGCATGCCCAAAGCCAAGTTCAAGCCTTTCAGCGACGCATACT GGGCAAAACGAGATGGCGATAAGTCACGCAAAAAAGATGCGGAGTCCAGC GACACCAATATGACGGAGAGAACTGTTCCAGTTGCTTGTCAGATAGTGAA CGGAGTTCAGGTTGGTTCGTCAGCAAGTTGGTATGGCGGAGGTTCTCGCA GCGACAGAAGATCCATGCAGATGGATGCACGCCCTTCGGAACCGGAACGT ACGCCAGAACTCGATGCTATGGCTATAGAAGTGGAAGAAGCATTCGGCAT TGTGAGGGTATCGTCAGGAGGTATTGTTCGTGGGGGTTCCTGTGGCCCAC AAGCTACCTATCTCCCGAGTGGAACTGGGATGGACAAGGATGTCGGAGCT GGGGCTCATATTGTCAAGGAGCACGATGTATCGAAATGCCCGTGA back to top
|