prot_F-serratus_M_contig1.39.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1.39.1
Unique Nameprot_F-serratus_M_contig1.39.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length110
Homology
BLAST of mRNA_F-serratus_M_contig1.39.1 vs. uniprot
Match: D7FPM0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPM0_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 8.970e-40
Identity = 68/76 (89.47%), Postives = 72/76 (94.74%), Query Frame = 0
Query:   34 RDRKKVKHIKHDGNVTLDQVIGIARTMRERSMARTLTGTMKEMLGPCNSVGCTVNGQSPRDIQSGIAEGEIIIPDE 109
            RDRKKVK+IKHDGNVTLDQVI IAR MRERSMARTL GT+KEMLG CNSVGCTVNGQSPRDIQSGI+EGEI+IPDE
Sbjct:   90 RDRKKVKNIKHDGNVTLDQVIEIARVMRERSMARTLAGTVKEMLGTCNSVGCTVNGQSPRDIQSGISEGEIVIPDE 165          
BLAST of mRNA_F-serratus_M_contig1.39.1 vs. uniprot
Match: A0A7S2XYN5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYN5_9STRA)

HSP 1 Score: 124 bits (311), Expect = 1.490e-33
Identity = 60/76 (78.95%), Postives = 68/76 (89.47%), Query Frame = 0
Query:   33 PRDRKKVKHIKHDGNVTLDQVIGIARTMRERSMARTLTGTMKEMLGPCNSVGCTVNGQSPRDIQSGIAEGEIIIPD 108
            PRDRKKVK+IKHDGN+TLDQVI +ARTMR RSMAR L+GT+KEMLG   S+GCTVNGQSPRDIQ  I+EGEI+IPD
Sbjct:  127 PRDRKKVKNIKHDGNLTLDQVIDVARTMRSRSMARHLSGTVKEMLGTAFSLGCTVNGQSPRDIQKAISEGEIVIPD 202          
BLAST of mRNA_F-serratus_M_contig1.39.1 vs. uniprot
Match: A0A7S2UAZ7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAZ7_9STRA)

HSP 1 Score: 122 bits (306), Expect = 2.890e-33
Identity = 55/76 (72.37%), Postives = 70/76 (92.11%), Query Frame = 0
Query:   34 RDRKKVKHIKHDGNVTLDQVIGIARTMRERSMARTLTGTMKEMLGPCNSVGCTVNGQSPRDIQSGIAEGEIIIPDE 109
            RDRKKVK++ H+GN+TL+QVI IA+ MRERSMAR L+GT+KE+LG CNS+GCTVNG+SPRDIQ+GI +GE++IPDE
Sbjct:   89 RDRKKVKNVVHNGNITLEQVIDIAKVMRERSMARKLSGTVKEILGTCNSIGCTVNGESPRDIQAGIDDGEVVIPDE 164          
BLAST of mRNA_F-serratus_M_contig1.39.1 vs. uniprot
Match: A0A7S0FUE0_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FUE0_9STRA)

HSP 1 Score: 120 bits (300), Expect = 4.080e-33
Identity = 58/76 (76.32%), Postives = 68/76 (89.47%), Query Frame = 0
Query:   34 RDRKKVKHIKHDGNVTLDQVIGIARTMRERSMARTLTGTMKEMLGPCNSVGCTVNGQSPRDIQSGIAEGEIIIPDE 109
            RDRKK K+I H+GN+TLDQVI IAR+MRERSMAR L GT+KE+LG CNS+GCTVNG+SPRDIQ+GI +GEI IPDE
Sbjct:   29 RDRKKEKNIVHNGNLTLDQVIEIARSMRERSMARLLAGTVKEILGTCNSIGCTVNGESPRDIQAGIDDGEIEIPDE 104          
BLAST of mRNA_F-serratus_M_contig1.39.1 vs. uniprot
Match: A0A835YTI9_9STRA (Ribosomal protein L11 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTI9_9STRA)

HSP 1 Score: 119 bits (298), Expect = 4.990e-32
Identity = 55/75 (73.33%), Postives = 64/75 (85.33%), Query Frame = 0
Query:   34 RDRKKVKHIKHDGNVTLDQVIGIARTMRERSMARTLTGTMKEMLGPCNSVGCTVNGQSPRDIQSGIAEGEIIIPD 108
            RDRKKVKH+KHDGNVTLDQ+I +AR MR RSMARTL GT+KE+LG   SVGCTVNG +PRD+Q  I +GEI+IPD
Sbjct:   91 RDRKKVKHVKHDGNVTLDQIIDVARVMRARSMARTLAGTVKEVLGTAFSVGCTVNGMAPRDVQKAITDGEIVIPD 165          
BLAST of mRNA_F-serratus_M_contig1.39.1 vs. uniprot
Match: K0TFA0_THAOC (Uncharacterized protein n=3 Tax=Eukaryota TaxID=2759 RepID=K0TFA0_THAOC)

HSP 1 Score: 118 bits (295), Expect = 1.340e-31
Identity = 55/76 (72.37%), Postives = 69/76 (90.79%), Query Frame = 0
Query:   34 RDRKKVKHIKHDGNVTLDQVIGIARTMRERSMARTLTGTMKEMLGPCNSVGCTVNGQSPRDIQSGIAEGEIIIPDE 109
            RDRKKVK+I H+GN+TLDQVI IA+ MRERSMA+ L+GT+KE+LG CNS+GCTVNG+SPRDIQ+GI +GE+ IP+E
Sbjct:   89 RDRKKVKNIVHNGNLTLDQVIDIAKQMRERSMAKKLSGTVKEILGTCNSIGCTVNGESPRDIQAGIDDGEVEIPEE 164          
BLAST of mRNA_F-serratus_M_contig1.39.1 vs. uniprot
Match: A0A7S3PV60_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PV60_9STRA)

HSP 1 Score: 117 bits (292), Expect = 3.820e-31
Identity = 55/76 (72.37%), Postives = 66/76 (86.84%), Query Frame = 0
Query:   34 RDRKKVKHIKHDGNVTLDQVIGIARTMRERSMARTLTGTMKEMLGPCNSVGCTVNGQSPRDIQSGIAEGEIIIPDE 109
            RDRKKVK++ HDGN+TLDQVI IAR MR+RS A+ L+GT+KEMLG CNS+GCTVNG SPRD+Q+GI +GEI IP E
Sbjct:   89 RDRKKVKNVTHDGNLTLDQVIEIARAMRDRSCAKELSGTVKEMLGTCNSIGCTVNGDSPRDVQAGIDDGEIEIPAE 164          
BLAST of mRNA_F-serratus_M_contig1.39.1 vs. uniprot
Match: A0A7S2LV58_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LV58_9STRA)

HSP 1 Score: 116 bits (291), Expect = 5.410e-31
Identity = 56/76 (73.68%), Postives = 67/76 (88.16%), Query Frame = 0
Query:   34 RDRKKVKHIKHDGNVTLDQVIGIARTMRERSMARTLTGTMKEMLGPCNSVGCTVNGQSPRDIQSGIAEGEIIIPDE 109
            RDRKKVK++ H+GN+TLD +I IARTMRERSMARTL GT+KE+LG   S+GCTVNG+SPRDIQSGI +GEI IP+E
Sbjct:   89 RDRKKVKNVVHNGNITLDAIIEIARTMRERSMARTLAGTVKEILGTAFSIGCTVNGESPRDIQSGIDDGEIEIPEE 164          
BLAST of mRNA_F-serratus_M_contig1.39.1 vs. uniprot
Match: B8BTS3_THAPS (RL12, ribosomal protein 11 60S large ribosomal subunit n=10 Tax=Ochrophyta TaxID=2696291 RepID=B8BTS3_THAPS)

HSP 1 Score: 115 bits (289), Expect = 1.090e-30
Identity = 54/76 (71.05%), Postives = 67/76 (88.16%), Query Frame = 0
Query:   34 RDRKKVKHIKHDGNVTLDQVIGIARTMRERSMARTLTGTMKEMLGPCNSVGCTVNGQSPRDIQSGIAEGEIIIPDE 109
            RDRKKVK++ H+GN+TLDQVI IAR MRERSMA+ L GT+KE+LG  NS+GCTVNG+SPRDIQ+GI +GE+ IP+E
Sbjct:   89 RDRKKVKNVVHNGNITLDQVIDIARQMRERSMAKKLAGTVKEILGTANSIGCTVNGESPRDIQAGIDDGEVEIPEE 164          
BLAST of mRNA_F-serratus_M_contig1.39.1 vs. uniprot
Match: A0A7S1BVM0_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BVM0_9STRA)

HSP 1 Score: 113 bits (282), Expect = 1.620e-30
Identity = 53/76 (69.74%), Postives = 66/76 (86.84%), Query Frame = 0
Query:   34 RDRKKVKHIKHDGNVTLDQVIGIARTMRERSMARTLTGTMKEMLGPCNSVGCTVNGQSPRDIQSGIAEGEIIIPDE 109
            RDRKK K+I H+GN+TLDQVI IAR MRERSMA+ L+GT+KE+LG  NS+GCTVNG++PRD+QS I +GE+ IPDE
Sbjct:   18 RDRKKEKNIVHNGNITLDQVIDIARQMRERSMAKELSGTVKEILGTANSIGCTVNGENPRDVQSAIDDGEVEIPDE 93          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1.39.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPM0_ECTSI8.970e-4089.47Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2XYN5_9STRA1.490e-3378.95Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2UAZ7_9STRA2.890e-3372.37Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S0FUE0_9STRA4.080e-3376.32Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A835YTI9_9STRA4.990e-3273.33Ribosomal protein L11 n=1 Tax=Tribonema minus TaxI... [more]
K0TFA0_THAOC1.340e-3172.37Uncharacterized protein n=3 Tax=Eukaryota TaxID=27... [more]
A0A7S3PV60_9STRA3.820e-3172.37Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2LV58_9STRA5.410e-3173.68Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
B8BTS3_THAPS1.090e-3071.05RL12, ribosomal protein 11 60S large ribosomal sub... [more]
A0A7S1BVM0_9STRA1.620e-3069.74Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036769Ribosomal protein L11, C-terminal domain superfamilyGENE3D1.10.10.250coord: 27..107
e-value: 1.5E-29
score: 104.2
IPR036769Ribosomal protein L11, C-terminal domain superfamilySUPERFAMILY46906Ribosomal protein L11, C-terminal domaincoord: 36..92
IPR020783Ribosomal protein L11, C-terminalPFAMPF00298Ribosomal_L11coord: 33..87
e-value: 8.1E-11
score: 42.3
NoneNo IPR availablePANTHERPTHR11661:SF2RIBOSOMAL PROTEIN L12coord: 30..108
IPR000911Ribosomal protein L11/L12PANTHERPTHR1166160S RIBOSOMAL PROTEIN L12coord: 30..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1contigF-serratus_M_contig1:1214873..1215202 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1.39.1mRNA_F-serratus_M_contig1.39.1Fucus serratus malemRNAF-serratus_M_contig1 1214873..1215202 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1.39.1 ID=prot_F-serratus_M_contig1.39.1|Name=mRNA_F-serratus_M_contig1.39.1|organism=Fucus serratus male|type=polypeptide|length=110bp
PDHRQSHHYQPPGHRGSRPHGVVASPQGAQRAPRDRKKVKHIKHDGNVTL
DQVIGIARTMRERSMARTLTGTMKEMLGPCNSVGCTVNGQSPRDIQSGIA
EGEIIIPDE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036769Ribosomal_L11_C_sf
IPR020783Ribosomal_L11_C
IPR000911Ribosomal_L11/L12