mRNA_F-serratus_M_contig1030.354.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1030.354.1 vs. uniprot
Match: D7G8X7_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8X7_ECTSI) HSP 1 Score: 276 bits (705), Expect = 3.510e-90 Identity = 130/145 (89.66%), Postives = 137/145 (94.48%), Query Frame = 3 Query: 504 RLQ-ELTELRKNKLEWCEIQPADDDILRWNAMLVGPEDTPFSGGCFNLEIEFPAEYPFKAPKVKFGTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQMLQEPHADNPLEADIARQLAEDKNAFDQTARKWTHDFASP 935 RLQ EL ELRKNKLEWC+IQP DDDI+RW AMLVGP+DTPF GGCFNLEIEFPAEYPFKAPKV+F TRIYHPNVKTD+GEICSDILNENWGPTLNVTYVLNTIRQMLQEPHADNPLEADIARQLAEDK+AF QTA+KWT DFASP Sbjct: 4 RLQKELAELRKNKLEWCDIQPMDDDIMRWTAMLVGPDDTPFGGGCFNLEIEFPAEYPFKAPKVRFVTRIYHPNVKTDSGEICSDILNENWGPTLNVTYVLNTIRQMLQEPHADNPLEADIARQLAEDKDAFTQTAKKWTLDFASP 148
BLAST of mRNA_F-serratus_M_contig1030.354.1 vs. uniprot
Match: A0A6V1MVK4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1MVK4_HETAK) HSP 1 Score: 210 bits (535), Expect = 1.700e-64 Identity = 97/144 (67.36%), Postives = 118/144 (81.94%), Query Frame = 3 Query: 504 RLQ-ELTELRKNKLEWCEIQPADDDILRWNAMLVGPEDTPFSGGCFNLEIEFPAEYPFKAPKVKFGTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQMLQEPHADNPLEADIARQLAEDKNAFDQTARKWTHDFAS 932 RLQ EL L K L++ PA DDI++W AMLVGP +TP+ GG FNLE++FPAEYPFKAPKVKF TRIYHPN+KTD+GEIC+D++NENWGPTLN YVL I+Q+L+EP AD+PLEADI RQL ED+NAF +TA KWT D+A+ Sbjct: 4 RLQKELQALEKAPLDFVTAGPAGDDIMKWQAMLVGPANTPYEGGVFNLELDFPAEYPFKAPKVKFLTRIYHPNIKTDSGEICADLINENWGPTLNTQYVLTVIKQLLEEPSADSPLEADIGRQLTEDENAFKETAAKWTADYAT 147
BLAST of mRNA_F-serratus_M_contig1030.354.1 vs. uniprot
Match: A0A835Z9K8_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9K8_9STRA) HSP 1 Score: 208 bits (529), Expect = 1.360e-63 Identity = 94/141 (66.67%), Postives = 120/141 (85.11%), Query Frame = 3 Query: 510 QELTELRKNKLEWCEIQPADDDILRWNAMLVGPEDTPFSGGCFNLEIEFPAEYPFKAPKVKFGTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQMLQEPHADNPLEADIARQLAEDKNAFDQTARKWTHDFAS 932 +ELTELRK L+WC+ P DD+I+ W+AM+VGP+++P++GG F L+IE EYPFKAPKVKF TRIYHPN++T+ GEIC+DILN+NWGPTLN+++VLNT+RQML EP A++PLE DIARQLAEDK F +TA K+T DFAS Sbjct: 7 KELTELRKAPLDWCQCGPVDDNIMHWSAMMVGPDNSPYAGGVFQLDIEMSPEYPFKAPKVKFLTRIYHPNIRTEGGEICADILNDNWGPTLNLSHVLNTLRQMLLEPSAESPLEPDIARQLAEDKAQFLKTAAKYTADFAS 147
BLAST of mRNA_F-serratus_M_contig1030.354.1 vs. uniprot
Match: A0A024U3D9_9STRA (UBC core domain-containing protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024U3D9_9STRA) HSP 1 Score: 206 bits (523), Expect = 1.090e-62 Identity = 88/141 (62.41%), Postives = 116/141 (82.27%), Query Frame = 3 Query: 510 QELTELRKNKLEWCEIQPADDDILRWNAMLVGPEDTPFSGGCFNLEIEFPAEYPFKAPKVKFGTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQMLQEPHADNPLEADIARQLAEDKNAFDQTARKWTHDFAS 932 +EL E KN EWC + P DDD+L WNAM+VGPE+TP++GG F++++ FPAEYPFKAPKVKF TR+YHPNVK+ +GEIC+DI+NE+WGPTLNV + L ++QML++P ADNPLE +IA+ L +++ F+ TARKWT DFAS Sbjct: 7 KELAEFNKNSPEWCTVGPVDDDLLHWNAMVVGPENTPYAGGVFSIDLVFPAEYPFKAPKVKFLTRVYHPNVKSQSGEICADIINESWGPTLNVLHCLTALKQMLEQPDADNPLEPEIAKLLHGNRDVFNDTARKWTKDFAS 147
BLAST of mRNA_F-serratus_M_contig1030.354.1 vs. uniprot
Match: G4YF85_PHYSP (UBC core domain-containing protein n=17 Tax=Peronosporaceae TaxID=4777 RepID=G4YF85_PHYSP) HSP 1 Score: 203 bits (516), Expect = 1.240e-61 Identity = 85/141 (60.28%), Postives = 115/141 (81.56%), Query Frame = 3 Query: 510 QELTELRKNKLEWCEIQPADDDILRWNAMLVGPEDTPFSGGCFNLEIEFPAEYPFKAPKVKFGTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQMLQEPHADNPLEADIARQLAEDKNAFDQTARKWTHDFAS 932 +EL E KN EWC + DDD++ WNAML GPED+P+SGG FNL+++FP+EYPFKAPKV+F TR+YHPNVK+ +GEIC+DI+NENWGPTLNV + L I+Q+L++P DNPLE +IA+Q+ E+K F++TA++WT +AS Sbjct: 7 KELAEFEKNSPEWCTVSAVDDDLMHWNAMLAGPEDSPYSGGVFNLDLQFPSEYPFKAPKVRFLTRVYHPNVKSQSGEICADIINENWGPTLNVLHCLTAIKQILEQPDMDNPLEPEIAKQMHENKADFEKTAQEWTKQYAS 147
BLAST of mRNA_F-serratus_M_contig1030.354.1 vs. uniprot
Match: A0A067CHA9_SAPPC (UBC core domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CHA9_SAPPC) HSP 1 Score: 201 bits (510), Expect = 9.880e-61 Identity = 83/141 (58.87%), Postives = 117/141 (82.98%), Query Frame = 3 Query: 510 QELTELRKNKLEWCEIQPADDDILRWNAMLVGPEDTPFSGGCFNLEIEFPAEYPFKAPKVKFGTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQMLQEPHADNPLEADIARQLAEDKNAFDQTARKWTHDFAS 932 +EL E KN +WC + DDD+L WNAM+VGP+++P++GG F++++ FPAEYPFKAPKVKF TR+YHPNVK+ +GEIC+D++NENWGPTLNV + L ++Q+L++P DNPLE +IA+QL +++AF++TA+KWT DFAS Sbjct: 7 KELAEFNKNSPDWCTVGTVDDDLLHWNAMVVGPDNSPYAGGVFSIDLLFPAEYPFKAPKVKFLTRVYHPNVKSQSGEICADVINENWGPTLNVMFCLTALKQILEQPDGDNPLEPEIAKQLQCNRDAFNETAKKWTKDFAS 147
BLAST of mRNA_F-serratus_M_contig1030.354.1 vs. uniprot
Match: A0A835YRR6_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRR6_9STRA) HSP 1 Score: 199 bits (507), Expect = 2.790e-60 Identity = 90/141 (63.83%), Postives = 113/141 (80.14%), Query Frame = 3 Query: 510 QELTELRKNKLEWCEIQPADDDILRWNAMLVGPEDTPFSGGCFNLEIEFPAEYPFKAPKVKFGTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQMLQEPHADNPLEADIARQLAEDKNAFDQTARKWTHDFAS 932 +EL EL+++ L+WC +P +DDIL+W A +VGP+ TP+ GG FN+ +EFPAEYPFKAPKVKF TRIYHP+V+T TGEIC+D+L NWGPTLNVT+VLNTIRQML EP ++PLE +I R L EDK AF + A K T +FAS Sbjct: 7 KELAELKRSPLDWCTCEPQEDDILQWTATIVGPDGTPYEGGIFNISLEFPAEYPFKAPKVKFQTRIYHPHVRTATGEICADVLLNNWGPTLNVTFVLNTIRQMLIEPSTESPLEPEIGRLLIEDKQAFIKNAAKCTAEFAS 147
BLAST of mRNA_F-serratus_M_contig1030.354.1 vs. uniprot
Match: A0A2D4CAW9_PYTIN (UBC core domain-containing protein n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4CAW9_PYTIN) HSP 1 Score: 199 bits (506), Expect = 3.950e-60 Identity = 82/141 (58.16%), Postives = 112/141 (79.43%), Query Frame = 3 Query: 510 QELTELRKNKLEWCEIQPADDDILRWNAMLVGPEDTPFSGGCFNLEIEFPAEYPFKAPKVKFGTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQMLQEPHADNPLEADIARQLAEDKNAFDQTARKWTHDFAS 932 +EL E KN +WC + DDD++ WNAM+ GPED+P+SGG F+L+++FP EYPFKAPK++F T++YHPN+KT +GEIC+DI+NENW PTLNV + L I+Q+L++P DNPLE +IARQL DK AF QTA++WT +A+ Sbjct: 7 KELAEFEKNSPDWCTVGSVDDDLMHWNAMVAGPEDSPYSGGVFSLDLQFPNEYPFKAPKIRFLTKVYHPNIKTSSGEICADIINENWAPTLNVLHCLQAIKQILEQPDVDNPLEPEIARQLQSDKEAFHQTAQEWTKQYAT 147
BLAST of mRNA_F-serratus_M_contig1030.354.1 vs. uniprot
Match: K3W7Y2_GLOUD (UBC core domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W7Y2_GLOUD) HSP 1 Score: 196 bits (499), Expect = 4.460e-59 Identity = 81/141 (57.45%), Postives = 112/141 (79.43%), Query Frame = 3 Query: 510 QELTELRKNKLEWCEIQPADDDILRWNAMLVGPEDTPFSGGCFNLEIEFPAEYPFKAPKVKFGTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQMLQEPHADNPLEADIARQLAEDKNAFDQTARKWTHDFAS 932 +EL E KN EWC + DDD++ WNAML GPE++P+SGG F+++++FP EYPFKAP+V+F TR+YHPNVK+ +GEIC+DI+NENWGPTLNV + L I+Q+L++P DNPLE +IA+QL ++ FD TA++WT +AS Sbjct: 7 KELAEFEKNSPEWCTVGAVDDDLMHWNAMLAGPENSPYSGGVFSIDLQFPNEYPFKAPRVRFLTRVYHPNVKSQSGEICADIINENWGPTLNVLHCLTAIKQILEQPDVDNPLEPEIAKQLQSNREEFDNTAKEWTKQYAS 147
BLAST of mRNA_F-serratus_M_contig1030.354.1 vs. uniprot
Match: A0A397DVW9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DVW9_9STRA) HSP 1 Score: 208 bits (529), Expect = 2.540e-58 Identity = 89/141 (63.12%), Postives = 116/141 (82.27%), Query Frame = 3 Query: 510 QELTELRKNKLEWCEIQPADDDILRWNAMLVGPEDTPFSGGCFNLEIEFPAEYPFKAPKVKFGTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQMLQEPHADNPLEADIARQLAEDKNAFDQTARKWTHDFAS 932 +EL E KN EWC + P DDD+L WNAM+VGPE+TP++GG F++++ FPAEYPFKAPKVKF TR+YHPNVK+ +GEIC+DI+NE+WGPTLNV + L ++QML++P ADNPLE +IA+QL ++ F+ TARKWT DFAS Sbjct: 7 KELAEFNKNSPEWCTVGPVDDDLLHWNAMVVGPENTPYAGGVFSIDLVFPAEYPFKAPKVKFLTRVYHPNVKSQSGEICADIINESWGPTLNVLHCLTALKQMLEQPDADNPLEPEIAKQLHGSRDVFNDTARKWTKDFAS 147 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1030.354.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1030.354.1 >prot_F-serratus_M_contig1030.354.1 ID=prot_F-serratus_M_contig1030.354.1|Name=mRNA_F-serratus_M_contig1030.354.1|organism=Fucus serratus male|type=polypeptide|length=160bp MHDRCTVPPPLLPLCRLQELTELRKNKLEWCEIQPADDDILRWNAMLVGPback to top mRNA from alignment at F-serratus_M_contig1030:205163..209649+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1030.354.1 ID=mRNA_F-serratus_M_contig1030.354.1|Name=mRNA_F-serratus_M_contig1030.354.1|organism=Fucus serratus male|type=mRNA|length=4487bp|location=Sequence derived from alignment at F-serratus_M_contig1030:205163..209649+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1030:205163..209649+ >mRNA_F-serratus_M_contig1030.354.1 ID=mRNA_F-serratus_M_contig1030.354.1|Name=mRNA_F-serratus_M_contig1030.354.1|organism=Fucus serratus male|type=CDS|length=960bp|location=Sequence derived from alignment at F-serratus_M_contig1030:205163..209649+ (Fucus serratus male)back to top |