mRNA_F-serratus_M_contig1494.3403.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1494.3403.1 vs. uniprot
Match: D8LSZ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSZ3_ECTSI) HSP 1 Score: 499 bits (1285), Expect = 8.450e-168 Identity = 282/467 (60.39%), Postives = 324/467 (69.38%), Query Frame = 3
Query: 360 MVMQDYMATHCRGEKPIAQRYKPKGMDSCFGNFPREYKRQDPRDGNSTQRRRPRDSYGSRNESPAKTRLNDASKGVPQVIRSGGASRPVSASYCRRP---SRWHNMRLALPTEVQAATSTANLRAGVRPKSAPAMRRRPSSHLQTSTRGKDFSSGFRGQREEERVGSWPKECTLSMAEASEETESRPKSAGGATSLLRERDRARREQAGNDLPDQEEMEATRSYLLKKGKFLMTPSKLMASLEVARATNSRPLSAPAFTRRRRLPAPPKAGAWRRRPIAATLFRKYYVRGDLPICVDHRGNRNAIRWKIRPADLDFHVYLPIFFDGVREVEDPFRFLAVQGTLDMMEGAPEKVLPVIPQLILPIKTALNTREPRIICPVLKVLQQMILLSPIVGEALVPYYRQILPVLNLFRGKNTNMGDSIDYNQRSRVNIGVLVMETLEVMEQFGGPDAFINIKYMIPTYESCGP 1751
M++QDY++ RGEKPI++R+ PKG+DSCFGNFP +YK +D DGN T RR R SY S SP KTR R G+ + R P +R R A+T VRPK+A A RP+S RG++ GG L DLPD++E+EATR+YLL +GKF +TPSKLMASLE ARATNSRPLSAPA RRRR PAPPKAGAWRRR IAATLFRKYYVRGDLPI VDH G+RNAIRWKIRPADLDFHVYLPIFFDG+REVEDP+RFLAVQGT+DM+EGAP+KVLPVIPQLILP+KTALNTREPRIICP LK+LQQMILLSP++G+ALVPYYRQ+LP+ NLFRG N+NMGD+IDYNQRSR+N+G L+METLEVMEQFGGPDAFINIKYMIPTYESCGP
Sbjct: 1 MIVQDYISKRFRGEKPISRRHMPKGVDSCFGNFPMQYKTKDAWDGNPTLRRDSRTSYTSPQRSPTKTR------------RPKGSRQXXXXXXXRDPGGETRTAERRGEGGVPSLASTEKGRKATRVRPKTAGA---RPTS---------------RGRK------------------------------GGGVVL-------------EDLPDRQELEATRTYLLTQGKFRITPSKLMASLEAARATNSRPLSAPASVRRRRAPAPPKAGAWRRRAIAATLFRKYYVRGDLPISVDHCGHRNAIRWKIRPADLDFHVYLPIFFDGLREVEDPYRFLAVQGTVDMIEGAPDKVLPVIPQLILPMKTALNTREPRIICPTLKILQQMILLSPMIGQALVPYYRQLLPMFNLFRGMNSNMGDAIDYNQRSRINVGKLIMETLEVMEQFGGPDAFINIKYMIPTYESCGP 394
BLAST of mRNA_F-serratus_M_contig1494.3403.1 vs. uniprot
Match: A0A836C8N9_9STRA (Parkin co-regulated protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8N9_9STRA) HSP 1 Score: 391 bits (1005), Expect = 1.510e-126 Identity = 192/254 (75.59%), Postives = 221/254 (87.01%), Query Frame = 3
Query: 990 DQEEMEATRSYLLKKGKFLMTPSKLMASLEVARATNSRPLSAPAFTRRRRLP--APPKAGAWRRRPIAATLFRKYYVRGDLPICVDHRGNRNAIRWKIRPADLDFHVYLPIFFDGVREVEDPFRFLAVQGTLDMMEGAPEKVLPVIPQLILPIKTALNTREPRIICPVLKVLQQMILLSPIVGEALVPYYRQILPVLNLFRGKNTNMGDSIDYNQRSRVNIGVLVMETLEVMEQFGGPDAFINIKYMIPTYESC 1745
D E++ATR YL+ GKF +P+KLMA+LEVARAT++RPL+AP + RRR PKAGAWRRR IA TLFR+YY RGDLPICVDHR N NAIRWK+R A+LDFHVYLPIFFDG+REVEDPFRFLAVQGTLDM+E AP+KVLPVIPQLILP+K+ALNTR P IICPVLK+LQQMILL+ VG+ALVPYYRQILP+ NLF+ KN N+GD IDY QRSRVN+G L++ETLE+MEQFGGPDAFINIKY+IPTYESC
Sbjct: 90 DLAELQATRQYLMTSGKFKTSPAKLMAALEVARATHTRPLTAPGYVLRRRQADVTAPKAGAWRRRAIAPTLFRRYYERGDLPICVDHRSNGNAIRWKMRAAELDFHVYLPIFFDGLREVEDPFRFLAVQGTLDMVEAAPDKVLPVIPQLILPLKSALNTRAPTIICPVLKILQQMILLNAAVGQALVPYYRQILPIFNLFKAKNANLGDGIDYGQRSRVNVGELILETLELMEQFGGPDAFINIKYLIPTYESC 343
BLAST of mRNA_F-serratus_M_contig1494.3403.1 vs. uniprot
Match: A0A7S3Y211_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y211_HETAK) HSP 1 Score: 289 bits (739), Expect = 3.140e-89 Identity = 137/199 (68.84%), Postives = 164/199 (82.41%), Query Frame = 3
Query: 1149 PPKAGAWRRRPIAATLFRKYYVRGDLPICVDHRGNRNAIRWKIRPADLDFHVYLPIFFDGVREVEDPFRFLAVQGTLDMMEGAPEKVLPVIPQLILPIKTALNTREPRIICPVLKVLQQMILLSPIVGEALVPYYRQILPVLNLFRGKNTNMGDSIDYNQRSRVNIGVLVMETLEVMEQFGGPDAFINIKYMIPTYESC 1745
P KAGA+R RPI ATLFR+YY RGDLP+ V+HR N+ RW +LD+H+YLPIF DG+RE +DP+RFLAVQGTLDM+ APEKVLPVIPQ+ILP+K ALNTR P IICP LKVLQQM+L +P+VG+ALVPYYRQ+LPV NL+R ++ N+GD I YNQR R N+ L+ ETLE++E GGPDAFINIKYMIPTYESC
Sbjct: 2 PDKAGAYRYRPIEATLFRRYYDRGDLPVVVEHRAAGNSTRWTRDLYELDYHIYLPIFVDGLRERDDPYRFLAVQGTLDMVLVAPEKVLPVIPQIILPLKAALNTRHPVIICPALKVLQQMVLQNPLVGQALVPYYRQLLPVFNLYRARDENLGDGIAYNQRQRTNVAELIRETLEILEVHGGPDAFINIKYMIPTYESC 200
BLAST of mRNA_F-serratus_M_contig1494.3403.1 vs. uniprot
Match: A0CJS0_PARTE (Uncharacterized protein n=3 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0CJS0_PARTE) HSP 1 Score: 272 bits (696), Expect = 2.690e-81 Identity = 129/201 (64.18%), Postives = 163/201 (81.09%), Query Frame = 3
Query: 1143 PAPPKAGAWRRRPIAATLFRKYYVRGDLPICVDHRGNRNAIRWKIRPADLDFHVYLPIFFDGVREVEDPFRFLAVQGTLDMMEGAPEKVLPVIPQLILPIKTALNTREPRIICPVLKVLQQMILLSPIVGEALVPYYRQILPVLNLFRGKNTNMGDSIDYNQRSRVNIGVLVMETLEVMEQFGGPDAFINIKYMIPTYESC 1745
PAPPKAGA+ +R I+ + FR+YY RGDLPI VDH+G+ N I WKI P LD+H YLPIFFDG+RE DP+RFLA+ GT ++E K+LPVIPQLI+PIKT LNTR+P I+ LKVLQ+++L +VGEALVPYYRQ+LP++NL++ +N+N+GD I+YNQR RVN+G L+ ETLE+ EQ GG DA+INIKYMIPTYESC
Sbjct: 112 PAPPKAGAYDQRTISVSDFRRYYDRGDLPIKVDHQGSVNRIIWKISPEQLDYHHYLPIFFDGLREKMDPYRFLAILGTYGLLENGGNKILPVIPQLIIPIKTNLNTRDPSIMEVQLKVLQKLVLSGEMVGEALVPYYRQLLPIMNLYKNRNSNLGDFIEYNQRKRVNVGDLIQETLELFEQTGGEDAYINIKYMIPTYESC 312
BLAST of mRNA_F-serratus_M_contig1494.3403.1 vs. uniprot
Match: A0A0G4GIH8_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GIH8_VITBC) HSP 1 Score: 270 bits (689), Expect = 2.650e-80 Identity = 128/202 (63.37%), Postives = 157/202 (77.72%), Query Frame = 3
Query: 1140 LPAPPKAGAWRRRPIAATLFRKYYVRGDLPICVDHRGNRNAIRWKIRPADLDFHVYLPIFFDGVREVEDPFRFLAVQGTLDMMEGAPEKVLPVIPQLILPIKTALNTREPRIICPVLKVLQQMILLSPIVGEALVPYYRQILPVLNLFRGKNTNMGDSIDYNQRSRVNIGVLVMETLEVMEQFGGPDAFINIKYMIPTYESC 1745
L PPKAGA+ +RPI + FR++Y RGDLPI V H G N I WK++P LD+H YLPIFFDG+RE EDP+RFLAVQG D++E K+LPV+PQLI+PIKTALNTR+ I+C +LKVLQ ++L +VGEALVPYYRQILPV NL++ + T+ GD +DY QR R N+G L+ ETLE+ E GG DAFINIKYMIPTYESC
Sbjct: 109 LAPPPKAGAYSKRPIPPSEFRRFYDRGDLPINVFHGGTGNKIAWKVKPEQLDYHHYLPIFFDGLREKEDPYRFLAVQGVFDLLEAGGSKILPVVPQLIIPIKTALNTRDHDIMCTMLKVLQALVLSGEMVGEALVPYYRQILPVFNLYKNRKTSTGDQMDYGQRKRANLGELIEETLELFEIHGGEDAFINIKYMIPTYESC 310
BLAST of mRNA_F-serratus_M_contig1494.3403.1 vs. uniprot
Match: A0A1R2C2S2_9CILI (Uncharacterized protein n=3 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2C2S2_9CILI) HSP 1 Score: 268 bits (685), Expect = 7.840e-80 Identity = 129/199 (64.82%), Postives = 156/199 (78.39%), Query Frame = 3
Query: 1149 PPKAGAWRRRPIAATLFRKYYVRGDLPICVDHRGNRNAIRWKIRPADLDFHVYLPIFFDGVREVEDPFRFLAVQGTLDMMEGAPEKVLPVIPQLILPIKTALNTREPRIICPVLKVLQQMILLSPIVGEALVPYYRQILPVLNLFRGKNTNMGDSIDYNQRSRVNIGVLVMETLEVMEQFGGPDAFINIKYMIPTYESC 1745
PPKAGA+ RR I ++ FR++Y RGD+PI V H G N I WK+ LD+H YLPIFFDG+RE DP+RFLA+QG DM+E KVLPVIPQLI+PIKTALNTR+P IIC +LK+LQ+++ + ++GEALVPYYRQILPV N+F+ KN N GD IDY QR R NIG L+ ETLE++E GG DAFINIKYMIPTYESC
Sbjct: 105 PPKAGAFNRRSIPSSEFRRFYDRGDMPIAVSH-GGTNKIVWKVAVDQLDYHHYLPIFFDGLREKSDPYRFLAIQGVFDMLEHGGNKVLPVIPQLIIPIKTALNTRDPDIICVILKILQKLVTSADMIGEALVPYYRQILPVFNIFKQKNANYGDKIDYAQRKRQNIGELIQETLELLETTGGEDAFINIKYMIPTYESC 302
BLAST of mRNA_F-serratus_M_contig1494.3403.1 vs. uniprot
Match: A0A0V0QPM2_PSEPJ (Armadillo-type fold n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0QPM2_PSEPJ) HSP 1 Score: 267 bits (682), Expect = 3.040e-79 Identity = 126/202 (62.38%), Postives = 163/202 (80.69%), Query Frame = 3
Query: 1146 APPK--AGAWRRRPIAATLFRKYYVRGDLPICVDHRGNRNAIRWKIRPADLDFHVYLPIFFDGVREVEDPFRFLAVQGTLDMMEGAPEKVLPVIPQLILPIKTALNTREPRIICPVLKVLQQMILLSPIVGEALVPYYRQILPVLNLFRGKNTNMGDSIDYNQRSRVNIGVLVMETLEVMEQFGGPDAFINIKYMIPTYESC 1745
APPK +GA+++R I + FR+YY RGDLPI VDH+G+ N I WKI+P LD+H YLPIFFDG+RE DP+RFL++ GT D++E K+LPVIPQLI+PIK LNTR+P II +LKVLQ+++L + ++GEALVPYYRQILP+ N+++ KN N+GD IDY+QR ++N+G L+ ETLE+ EQ GG DAFINIKYMIPTYESC
Sbjct: 112 APPKPVSGAFQQRNIIVSDFRRYYDRGDLPIKVDHQGSVNKIIWKIKPEQLDYHHYLPIFFDGLREKIDPYRFLSIMGTNDLLERGENKILPVIPQLIIPIKNGLNTRDPEIISIMLKVLQKLVLSAEMIGEALVPYYRQILPIFNIYKNKNINLGDQIDYSQRKKINLGDLIQETLELFEQTGGEDAFINIKYMIPTYESC 313
BLAST of mRNA_F-serratus_M_contig1494.3403.1 vs. uniprot
Match: A0A6T7Z7R8_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A6T7Z7R8_9EUKA) HSP 1 Score: 266 bits (680), Expect = 5.070e-79 Identity = 130/200 (65.00%), Postives = 156/200 (78.00%), Query Frame = 3
Query: 1149 PPKAGAWRRRPIAA-TLFRKYYVRGDLPICVDHRGNRNAIRWKIRPADLDFHVYLPIFFDGVREVEDPFRFLAVQGTLDMMEGAPEKVLPVIPQLILPIKTALNTREPRIICPVLKVLQQMILLSPIVGEALVPYYRQILPVLNLFRGKNTNMGDSIDYNQRSRVNIGVLVMETLEVMEQFGGPDAFINIKYMIPTYESC 1745
PP GA+R R T FR++Y RGDLPI V+HRG N I WK+ LD+H YLPIFFDG+RE E+P+RFLAVQG DM+E K+LPVIPQLI+PIKTALNTR+P IIC VLKVLQQM++ ++GEALVPYYRQILP+ NLF+ KN N+GD IDY+Q+ R +G L++ETLE+ E GG DAFINIKYMIPTYESC
Sbjct: 109 PPICGAFRERANPPNTEFRRFYERGDLPIQVEHRGVHNRIGWKVDIEKLDYHHYLPIFFDGLREKEEPYRFLAVQGVFDMLENGGSKILPVIPQLIIPIKTALNTRDPPIICTVLKVLQQMVVSGEMIGEALVPYYRQILPIFNLFKSKNNNLGDGIDYSQQKRKTLGDLIVETLEMFEIHGGEDAFINIKYMIPTYESC 308
BLAST of mRNA_F-serratus_M_contig1494.3403.1 vs. uniprot
Match: A0A1R2BM68_9CILI (Uncharacterized protein n=2 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BM68_9CILI) HSP 1 Score: 265 bits (678), Expect = 8.190e-79 Identity = 127/202 (62.87%), Postives = 157/202 (77.72%), Query Frame = 3
Query: 1140 LPAPPKAGAWRRRPIAATLFRKYYVRGDLPICVDHRGNRNAIRWKIRPADLDFHVYLPIFFDGVREVEDPFRFLAVQGTLDMMEGAPEKVLPVIPQLILPIKTALNTREPRIICPVLKVLQQMILLSPIVGEALVPYYRQILPVLNLFRGKNTNMGDSIDYNQRSRVNIGVLVMETLEVMEQFGGPDAFINIKYMIPTYESC 1745
L APP+AGA+ +R I + FR++Y RGD+PI V H G N I WK+ LD+H YLPIFFDG+RE DP+RFLA+QG DM+E KVLPVIPQLI+P+KTALNTR+P IIC +LK+LQ+++ + ++GEALVPYYRQILPV N+F+ KN N GD IDY+QR NIG L+ ETLE++E GG DAFINIKYMIPTYESC
Sbjct: 102 LVAPPRAGAYNKRNIPPSEFRRFYDRGDMPIAVSH-GGTNKIVWKVAVDQLDYHHYLPIFFDGLREKTDPYRFLAIQGVFDMLEHGGNKVLPVIPQLIIPVKTALNTRDPDIICVILKILQKLVTSADMIGEALVPYYRQILPVFNIFKHKNANYGDKIDYSQRKHQNIGELIQETLELLETTGGEDAFINIKYMIPTYESC 302
BLAST of mRNA_F-serratus_M_contig1494.3403.1 vs. uniprot
Match: A0A7S4B761_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B761_CHRCT) HSP 1 Score: 264 bits (675), Expect = 3.170e-78 Identity = 126/202 (62.38%), Postives = 157/202 (77.72%), Query Frame = 3
Query: 1143 PAPPKAGAWRRRPIAA-TLFRKYYVRGDLPICVDHRGNRNAIRWKIRPADLDFHVYLPIFFDGVREVEDPFRFLAVQGTLDMMEGAPEKVLPVIPQLILPIKTALNTREPRIICPVLKVLQQMILLSPIVGEALVPYYRQILPVLNLFRGKNTNMGDSIDYNQRSRVNIGVLVMETLEVMEQFGGPDAFINIKYMIPTYESC 1745
PAPP GA+++R T FR++Y RGDLPI ++HRG N I WK+ LD+H YLPIFFDG+RE E+P+RFL+VQG DM+E K+LPVIPQLI+PIKTALNTR+P +IC VLKVLQQM++ ++GEALVPYYRQILP+ N+F+ N N+GD IDY Q+ R +G L++ETLE+ E GG DAFINIKYMIPTYESC
Sbjct: 112 PAPPICGAYKQRANPPNTEFRRFYERGDLPIQIEHRGVHNRIGWKVDIEKLDYHHYLPIFFDGLREKEEPYRFLSVQGVFDMLEHGGSKILPVIPQLIIPIKTALNTRDPDVICTVLKVLQQMVVSGEMIGEALVPYYRQILPIFNIFKNSNKNLGDKIDYGQQKRKTLGDLIVETLEMFETHGGEDAFINIKYMIPTYESC 313 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1494.3403.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1494.3403.1 >prot_F-serratus_M_contig1494.3403.1 ID=prot_F-serratus_M_contig1494.3403.1|Name=mRNA_F-serratus_M_contig1494.3403.1|organism=Fucus serratus male|type=polypeptide|length=484bp MNYYMGVCAVPRDPTIASSMVMQDYMATHCRGEKPIAQRYKPKGMDSCFGback to top mRNA from alignment at F-serratus_M_contig1494:136707..143250+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1494.3403.1 ID=mRNA_F-serratus_M_contig1494.3403.1|Name=mRNA_F-serratus_M_contig1494.3403.1|organism=Fucus serratus male|type=mRNA|length=6544bp|location=Sequence derived from alignment at F-serratus_M_contig1494:136707..143250+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1494:136707..143250+ >mRNA_F-serratus_M_contig1494.3403.1 ID=mRNA_F-serratus_M_contig1494.3403.1|Name=mRNA_F-serratus_M_contig1494.3403.1|organism=Fucus serratus male|type=CDS|length=2904bp|location=Sequence derived from alignment at F-serratus_M_contig1494:136707..143250+ (Fucus serratus male)back to top |