mRNA_F-serratus_M_contig149.3364.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig149.3364.1
Unique NamemRNA_F-serratus_M_contig149.3364.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig149.3364.1 vs. uniprot
Match: D8LQ50_ECTSI (Myotubularin phosphatase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ50_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 9.010e-34
Identity = 71/110 (64.55%), Postives = 81/110 (73.64%), Query Frame = 3
Query:  303 QGVIKPMSLDSPQETD-AEACPAAHSTSSSASRVIHGNTGWRMFHNRSHRLVPTYPLHFVVPAAMSDADVRAVAAYRCKGRLPTVTWMDPQTKAVLARSAQPLAGLGGNS 629
            QGVIKP SLDSP  T    A   A  T  S +        WR+F+NRS+ LVP+YPLHFVVPA MSDA+VRA AAYR KGRLP VTWMDP+T+AVL+RSAQPLAGLGG +
Sbjct:  152 QGVIKPKSLDSPARTGPVNAASGAMHTEGSLAGTPDEPPRWRLFYNRSYTLVPSYPLHFVVPAVMSDANVRAAAAYRSKGRLPVVTWMDPKTRAVLSRSAQPLAGLGGKT 261          
BLAST of mRNA_F-serratus_M_contig149.3364.1 vs. uniprot
Match: A0A6H5KY31_9PHAE (Myotubularin phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY31_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 2.910e-24
Identity = 66/118 (55.93%), Postives = 79/118 (66.95%), Query Frame = 3
Query:    3 DMRSCRMRFFYHNPLFVSSLTQIIGSMAAFSQTSPEKAFAITHATAVHRNRRRSTYEADSLME----GEPGTISSATAVDVTPEVDTP---DVDGWLVYDEETEFVRQGVIKPMSLDS 335
            D+RSCRMRF  +N LFVS+LTQIIGSMAAF+Q SPE++FAI HA AV  +RRR   +A  L E    G  G + +A                +DGWLVYDEE++FVRQGVIKP SLDS
Sbjct:  133 DLRSCRMRFLSNNALFVSTLTQIIGSMAAFTQGSPERSFAICHAAAV--DRRRCADDAAKLRESRAVGGNGRVGNAAXXXXXXXXXXRADNSLDGWLVYDEESDFVRQGVIKPKSLDS 248          
BLAST of mRNA_F-serratus_M_contig149.3364.1 vs. uniprot
Match: D2VJH8_NAEGR (Myotubularin-related n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VJH8_NAEGR)

HSP 1 Score: 86.7 bits (213), Expect = 3.880e-16
Identity = 58/175 (33.14%), Postives = 89/175 (50.86%), Query Frame = 3
Query:  102 SPEKAFAITHATAVHRNRRRSTYEADSLMEGE-PGTISSATAV-DVTPEVDTPDVDGWLVYDEETEFVRQGVIKPMSLDSPQETDAEACPAAHSTSSSASRVIHGNTGWRMFH-NRSHRLVPTYPLHFVVPAAMSDADVRAVAAYRCKGRLPTVTWMDPQTKAVLARSAQPLAGL 617
            +PE  FA  +   +      +  EA S    E P   SS+  +  + P   +  VDGW VYD   E+ RQGV+   ++ +PQ T         S  S           WR+   N+++++  TYP  F+VP  +SD +V+A A +R +GR+P ++W DP+T+  L R AQP+ GL
Sbjct:  255 NPEHFFAYKYRLTIPPPTTNTIGEATSPTGVESPSNGSSSNGIPSILPTPSSEPVDGWRVYDLVKEYTRQGVLSNNNV-TPQNTSHRQIKTPPSNMS--------KQNWRICTLNQNYKICDTYPSLFLVPNNLSDEEVKAAAEFRSRGRIPVLSWYDPETELSLTRCAQPMIGL 420          
BLAST of mRNA_F-serratus_M_contig149.3364.1 vs. uniprot
Match: A0A6A5BX75_NAEFO (Myotubularin phosphatase domain-containing protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BX75_NAEFO)

HSP 1 Score: 82.0 bits (201), Expect = 1.580e-14
Identity = 46/121 (38.02%), Postives = 68/121 (56.20%), Query Frame = 3
Query:  258 VDGWLVYDEETEFVRQGVIKPMSLDSPQETDAEACPAAHSTSSSASRVIHGNTGWRMFH-NRSHRLVPTYPLHFVVPAAMSDADVRAVAAYRCKGRLPTVTWMDPQTKAVLARSAQPLAGL 617
            V+GW VYD   EF RQGV           T+A        T  S ++  H    WR+   N+ +++  TYP  F+VP  +SD +V+A A +R +GR+P ++W DP+++  L RSAQP+ GL
Sbjct:  352 VNGWQVYDLVKEFTRQGVFVSTIA-----TNASLAHRQIKTPPSNAKQPH----WRICTLNQGYKICDTYPSQFLVPCNLSDEEVKAAAEFRSRGRIPVLSWYDPESQLSLTRSAQPMIGL 463          
BLAST of mRNA_F-serratus_M_contig149.3364.1 vs. uniprot
Match: A0A8K1CQB1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CQB1_PYTOL)

HSP 1 Score: 81.3 bits (199), Expect = 2.810e-14
Identity = 49/123 (39.84%), Postives = 68/123 (55.28%), Query Frame = 3
Query:  252 PDVDGWLVYDEETEFVRQGVIKPMSLDSPQETDAEACPAAHSTSSSASRVIHGNTGWRMFH-NRSHRLVPTYPLHFVVPAAMSDADVRAVAAYRCKGRLPTVTWMDPQTKAVLARSAQPLAGL 617
            PDV+GW VYD +TEF R G   P S                          H  TG+R+   N ++++ PTYP  FVVPAA+SD ++R ++ +R +GR+P VT+   +  AV+AR AQPL GL
Sbjct:  203 PDVEGWRVYDAQTEFQRLGFKSPKST-------------------------HLVTGFRVTTINSNYKMCPTYPGAFVVPAALSDGELRKMSHFRARGRIPAVTYRY-RNDAVIARCAQPLVGL 299          
BLAST of mRNA_F-serratus_M_contig149.3364.1 vs. uniprot
Match: UPI001CFDD910 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFDD910)

HSP 1 Score: 80.9 bits (198), Expect = 3.940e-14
Identity = 45/121 (37.19%), Postives = 67/121 (55.37%), Query Frame = 3
Query:  258 VDGWLVYDEETEFVRQGVIKPMSLDSPQETDAEACPAAHSTSSSASRVIHGNTGWRMFH-NRSHRLVPTYPLHFVVPAAMSDADVRAVAAYRCKGRLPTVTWMDPQTKAVLARSAQPLAGL 617
            ++GW VYD   EF RQGV           T+A        T  S  +  H    WR+   N+ +++  TYP  F+VP  +SD +V+A A +R +GR+P ++W DP+++  L RSAQP+ GL
Sbjct:  360 INGWQVYDLVKEFTRQGVFVSTIA-----TNASLAHRQIKTPPSNVKQPH----WRICSLNQGYKICDTYPSQFLVPCNLSDEEVKAAAEFRSRGRIPVLSWYDPESQLSLTRSAQPMIGL 471          
BLAST of mRNA_F-serratus_M_contig149.3364.1 vs. uniprot
Match: A0A8J5MH07_9STRA (Myotubularin phosphatase domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5MH07_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 8.450e-13
Identity = 45/123 (36.59%), Postives = 67/123 (54.47%), Query Frame = 3
Query:  252 PDVDGWLVYDEETEFVRQGVIKPMSLDSPQETDAEACPAAHSTSSSASRVIHGNTGWRMFH-NRSHRLVPTYPLHFVVPAAMSDADVRAVAAYRCKGRLPTVTWMDPQTKAVLARSAQPLAGL 617
            PD  GW  YD + EF R G   P S                      +++     G+R+ H N ++++ PTYP  FVVPA++SD ++R ++ +R +GR+PTVT+   +  AV+AR AQPL GL
Sbjct:  627 PDTSGWAAYDSQAEFTRLGFKTPKS---------------------GAQI----GGFRITHVNNNYKMSPTYPSSFVVPASVSDGELRKMSFFRARGRVPTVTYRH-KNDAVVARCAQPLVGL 723          
BLAST of mRNA_F-serratus_M_contig149.3364.1 vs. uniprot
Match: A0A210QW66_MIZYE (Phosphatidylinositol-3,5-bisphosphate 3-phosphatase n=2 Tax=Pectinidae TaxID=6566 RepID=A0A210QW66_MIZYE)

HSP 1 Score: 76.6 bits (187), Expect = 1.030e-12
Identity = 34/70 (48.57%), Postives = 50/70 (71.43%), Query Frame = 3
Query:  411 NTGWRMFH-NRSHRLVPTYPLHFVVPAAMSDADVRAVAAYRCKGRLPTVTWMDPQTKAVLARSAQPLAGL 617
            N  WR+   N ++    TYP  FVVPAA +D D++AVA++R KGRLP ++W+ PQ++A ++RS QPL G+
Sbjct:  233 NESWRVTRINENYEACDTYPSLFVVPAATTDDDIKAVASFRTKGRLPVLSWIHPQSQATISRSGQPLVGV 302          
BLAST of mRNA_F-serratus_M_contig149.3364.1 vs. uniprot
Match: D0N4K5_PHYIT (Phosphatidylinositol-3-phosphatase n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0N4K5_PHYIT)

HSP 1 Score: 76.3 bits (186), Expect = 1.560e-12
Identity = 46/122 (37.70%), Postives = 61/122 (50.00%), Query Frame = 3
Query:  252 PDVDGWLVYDEETEFVRQGVIKPMSLDSPQETDAEACPAAHSTSSSASRVIHGNTGWRMFHNRSHRLVPTYPLHFVVPAAMSDADVRAVAAYRCKGRLPTVTWMDPQTKAVLARSAQPLAGL 617
            PD  GW  YD + EF R G   P S                S      RV H N  ++M         PTYP  FVVPA++SD ++R ++ +R +GR+P VT+   +  AV+AR AQPL GL
Sbjct:  675 PDTSGWAAYDPQAEFTRLGFKTPKS----------------SAQIGGFRVTHVNNNYKMS--------PTYPSAFVVPASVSDGELRKISFFRARGRVPAVTYRH-KNDAVVARCAQPLVGL 771          
BLAST of mRNA_F-serratus_M_contig149.3364.1 vs. uniprot
Match: V9EU71_PHYPR (Myotubularin phosphatase domain-containing protein n=1 Tax=Phytophthora parasitica P1569 TaxID=1317065 RepID=V9EU71_PHYPR)

HSP 1 Score: 74.7 bits (182), Expect = 2.260e-12
Identity = 44/122 (36.07%), Postives = 61/122 (50.00%), Query Frame = 3
Query:  252 PDVDGWLVYDEETEFVRQGVIKPMSLDSPQETDAEACPAAHSTSSSASRVIHGNTGWRMFHNRSHRLVPTYPLHFVVPAAMSDADVRAVAAYRCKGRLPTVTWMDPQTKAVLARSAQPLAGL 617
            PD  GW  YD + EF R G   P S                 T     R+ H N  ++M         P+YP  FVVPA++SD ++R ++ +R +GR+P VT+   +  AV+AR AQPL GL
Sbjct:  147 PDTSGWAAYDPQAEFTRLGFKAPKS----------------GTQIGGFRIAHVNNNYKMS--------PSYPSAFVVPASVSDGELRKISFFRARGRVPAVTYRH-KNDAVVARCAQPLVGL 243          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig149.3364.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ50_ECTSI9.010e-3464.55Myotubularin phosphatase domain-containing protein... [more]
A0A6H5KY31_9PHAE2.910e-2455.93Myotubularin phosphatase domain-containing protein... [more]
D2VJH8_NAEGR3.880e-1633.14Myotubularin-related n=1 Tax=Naegleria gruberi Tax... [more]
A0A6A5BX75_NAEFO1.580e-1438.02Myotubularin phosphatase domain-containing protein... [more]
A0A8K1CQB1_PYTOL2.810e-1439.84Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
UPI001CFDD9103.940e-1437.19uncharacterized protein n=1 Tax=Naegleria lovanien... [more]
A0A8J5MH07_9STRA8.450e-1336.59Myotubularin phosphatase domain-containing protein... [more]
A0A210QW66_MIZYE1.030e-1248.57Phosphatidylinositol-3,5-bisphosphate 3-phosphatas... [more]
D0N4K5_PHYIT1.560e-1237.70Phosphatidylinositol-3-phosphatase n=1 Tax=Phytoph... [more]
V9EU71_PHYPR2.260e-1236.07Myotubularin phosphatase domain-containing protein... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig149contigF-serratus_M_contig149:593606..596413 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score138.3
Seed ortholog evalue4.2e-30
Seed eggNOG ortholog2880.D8LQ50
KEGG rclassRC00078
KEGG koko:K01108
KEGG ReactionR03330,R03363,R06875
KEGG Pathwayko00562,ko01100,ko04070,map00562,map01100,map04070
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity
EggNOG OGsKOG4471@1,KOG4471@2759
EC3.1.3.64,3.1.3.95
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01009
Exons5
Model size632
Cds size627
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig149.3364.1prot_F-serratus_M_contig149.3364.1Fucus serratus malepolypeptideF-serratus_M_contig149 593606..596408 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929465.8448687-CDS-F-serratus_M_contig149:593605..5937261622929465.8448687-CDS-F-serratus_M_contig149:593605..593726Fucus serratus maleCDSF-serratus_M_contig149 593606..593726 -
1690962865.83126-CDS-F-serratus_M_contig149:593605..5937261690962865.83126-CDS-F-serratus_M_contig149:593605..593726Fucus serratus maleCDSF-serratus_M_contig149 593606..593726 -
1622929465.862578-CDS-F-serratus_M_contig149:594823..5950001622929465.862578-CDS-F-serratus_M_contig149:594823..595000Fucus serratus maleCDSF-serratus_M_contig149 594824..595000 -
1690962865.8516808-CDS-F-serratus_M_contig149:594823..5950001690962865.8516808-CDS-F-serratus_M_contig149:594823..595000Fucus serratus maleCDSF-serratus_M_contig149 594824..595000 -
1622929465.8772502-CDS-F-serratus_M_contig149:595357..5955001622929465.8772502-CDS-F-serratus_M_contig149:595357..595500Fucus serratus maleCDSF-serratus_M_contig149 595358..595500 -
1690962865.8634663-CDS-F-serratus_M_contig149:595357..5955001690962865.8634663-CDS-F-serratus_M_contig149:595357..595500Fucus serratus maleCDSF-serratus_M_contig149 595358..595500 -
1622929465.8921547-CDS-F-serratus_M_contig149:595855..5959781622929465.8921547-CDS-F-serratus_M_contig149:595855..595978Fucus serratus maleCDSF-serratus_M_contig149 595856..595978 -
1690962865.879672-CDS-F-serratus_M_contig149:595855..5959781690962865.879672-CDS-F-serratus_M_contig149:595855..595978Fucus serratus maleCDSF-serratus_M_contig149 595856..595978 -
1622929465.9068851-CDS-F-serratus_M_contig149:596345..5964081622929465.9068851-CDS-F-serratus_M_contig149:596345..596408Fucus serratus maleCDSF-serratus_M_contig149 596346..596408 -
1690962865.899737-CDS-F-serratus_M_contig149:596345..5964081690962865.899737-CDS-F-serratus_M_contig149:596345..596408Fucus serratus maleCDSF-serratus_M_contig149 596346..596408 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929465.9174848-UTR-F-serratus_M_contig149:596408..5964131622929465.9174848-UTR-F-serratus_M_contig149:596408..596413Fucus serratus maleUTRF-serratus_M_contig149 596409..596413 -
1690962865.908787-UTR-F-serratus_M_contig149:596408..5964131690962865.908787-UTR-F-serratus_M_contig149:596408..596413Fucus serratus maleUTRF-serratus_M_contig149 596409..596413 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig149.3364.1

>prot_F-serratus_M_contig149.3364.1 ID=prot_F-serratus_M_contig149.3364.1|Name=mRNA_F-serratus_M_contig149.3364.1|organism=Fucus serratus male|type=polypeptide|length=209bp
MRSCRMRFFYHNPLFVSSLTQIIGSMAAFSQTSPEKAFAITHATAVHRNR
RRSTYEADSLMEGEPGTISSATAVDVTPEVDTPDVDGWLVYDEETEFVRQ
GVIKPMSLDSPQETDAEACPAAHSTSSSASRVIHGNTGWRMFHNRSHRLV
PTYPLHFVVPAAMSDADVRAVAAYRCKGRLPTVTWMDPQTKAVLARSAQP
LAGLGGNS*
back to top

mRNA from alignment at F-serratus_M_contig149:593606..596413-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig149.3364.1 ID=mRNA_F-serratus_M_contig149.3364.1|Name=mRNA_F-serratus_M_contig149.3364.1|organism=Fucus serratus male|type=mRNA|length=2808bp|location=Sequence derived from alignment at F-serratus_M_contig149:593606..596413- (Fucus serratus male)
AGGACATGCGGAGCTGCCGTATGCGTTTCTTCTACCACAACCCCCTCTTC GTGTCGAGTCTAACACAGGTATTATTAACATATTACTGTACTTTATCATG GATTGGGCAAGGTCGATTTGGCCTATGTACTGTACTCGTAAACTTGGCAG GGAGGGCAGGGGGGCGAGGGGAGGATCATCGAGTTCATTGAACATACGTT TTGTGTTGATATCTTGCTTGCCTGTCTGTGTGATCTCCTTTATTAATGCA CAAACTGTAAGACAAACTTTATGCCGAGGACTCCATACATAAAAGCATGA GTAATTTTTCGGGTGTCCATATGGGTTTACATGCGCCCGTTCGGCGAATG CGATGCGGACGTGGCATTGTCTGTACGCAACAACAACAGCAAATAGCAAG TCATTCGGTTCTGATTCCCGTCTCGATCGATCCAGATCATAGGGTCGATG GCCGCCTTCTCGCAGACGTCTCCAGAAAAGGCGTTCGCTATCACTCACGC CACTGCTGTGCATAGGAACAGGAGGCGATCTACGTACGAAGCGGACTCGT TGATGGAGGTACTGCCTGCATCTTGTTCGATGAGATTGTTATTAGCCCCA AAATACTGTACCTGGTATGTCGATGAGATCGTTGCAAGTATAGAGCGAAG TCACGAACAAATGACAAATGGTGGCTATACAGCGACTTGTCGGGTACAAG CGATAAACGTCACGTCGTCGAACGAGACCCACACGGATGATGCAACAGGA AGGAATGCTATGCAGGACTTGGTGTAGGAATATTGCATTCCAGCAACTTG GGGGAGGGATAGTTACTGACTATCAATAGCTAGTCAATAGGTCGTTCTGG CAGTAAAAGCATGCATACCCACCCCTTTGATAGCAACGGTATTTGTTCGG CCTCTTCTTAAAGGGGGAGCCAGGCACCATCTCTAGCGCTACAGCTGTCG ACGTGACGCCTGAGGTGGATACACCCGACGTGGATGGGTGGCTCGTGTAC GATGAGGAGACGGAGTTCGTCCGACAGGGCGTGATCAAGCCCATGTCACT GGACTCGTAAGTCTTGTCTGTAATGGTATGGGTTATGCCTAAGTCCGCTA TAAAAGTAATGCTACTACAACAGTACGGCATGAAGGATTCCCCTTGATTT CCACCTAGAGTTCCATGGGGGGAATGACGAGAAAATATAGAAGGGAGGTA GTGTTTAACAACGGTTGATTTTTACACAAAACAGTAAAGCAAAACGCCAA CACACTCTATACAGTAATACAGCTTTGCTCCAGTATGCTGTATTCGGGCT ATTTGTAGCATGGCACGTTTTCCTACGGAGCGGAGTGGAGCGCACCAACG AACCAACGACCCCCGTTGTTTGGTGCTTGGGGAACCTTGACCCTGGTCCT TGTTCTTTCTCAGGCCTCAAGAGACAGACGCGGAAGCTTGTCCGGCAGCT CATTCAACGAGTTCCTCGGCGAGCAGGGTCATTCACGGGAACACCGGCTG GCGCATGTTCCACAACCGGTCACACAGACTGGTGCCCACGTATCCGCTGC ACTTTGTGGTCCCCGCCGCCATGTCGGACGCCGATGTCAGGTAACACGTG TAGACACAGACGTCGTAATGTCGCCGCATACTTCGTCCATCGGAGTTGCA CACAGACGGAGGCGTTAGTGTCGCGTCCGCTAAGAGTGGTCAGTATTCTC AGCAGTATTTTGAGAGATCCCTGCATACTCTCTTACAGTTTACAAACCAC TGTCGGCGGGGTGAGCCATCCTGAACGCAGTATGTTATGATGATTGGTCT GGAATCCCCCCGCATTCCGTAATGACCTAGTAATAGGTGTAAAATATGGT TTTGTATAATCCGTTCTGGCATTCTTTTGTTAGATGACAGTTCCGTGTTC CAAGCTGAAGTTAGAGCCTCGTCGCTCAGACCTCAACTCTGCCAAGATGT AACAGACAAATGTTAATGAGAGAACCCACCGAACCCAGCGCACAAAACAG CTCTCCAAGGTGACTAGCAACTACTACGCGTGATATTATTGTGTGTGAGA AAACTCAGAACGCGCCTATACCTTCTGAGCATCCCCCAGTCAGGAGCAAA AAAGTGTCAAAACGTTTAGGTGGGATTATAGGCTTCAAATACAAAACCTC TTCATGGCATGTTTCTGCACCAACCCTCTTAGATCTGGCGTCGACGGTAG GACTCGAACCTACGTGTGAGATCACATTGTGTTTCGAAAATCATTGCGCA TGTTCCTGCACCAATCCTCTTGAAAAGTAGCAATGTCTCATGCTAATACT GATACTACGCACTTTCAATTATGGTTCAGTTTTCTTCGAGGACGGAAATT TCCCTCTGGCTACTCAATACAAACACGAATGTAAAAAAACGGCGCAAGCG TGAAACGTGCTGTAGCAAAATAATCTGGAAACCCCTGGCGTTGATCCTTT TGACTGAACGCAACATACTTGGTGTTTCTGTTTACATAGAGCTACTGTAT TACCGGTACACCGGGGCAGTAGATACGTTACAAGAAAAAGTGTCTGTAGC TGTTAATAGTACCGGAGTTCATACAGGAAAATTGGCAGGGGACAACAATC AAATATCCCCGATGGGGTGTTTCTCATTGAGAAACTGCGAGGTCTCTCTC CTCTGCCTTCCTGAATGCTCTGTTTCCTCACGACCAGGGCGGTGGCCGCT TACCGCTGCAAGGGTCGTCTGCCGACGGTAACCTGGATGGACCCTCAAAC GAAGGCCGTGCTCGCTCGATCCGCGCAGCCCCTGGCGGGCCTGGGCGGCA ACTCGTGA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig149:593606..596413-

>mRNA_F-serratus_M_contig149.3364.1 ID=mRNA_F-serratus_M_contig149.3364.1|Name=mRNA_F-serratus_M_contig149.3364.1|organism=Fucus serratus male|type=CDS|length=1254bp|location=Sequence derived from alignment at F-serratus_M_contig149:593606..596413- (Fucus serratus male)
ATGCGGAGCTGCCGTATGCGTTTCTTCTACCACAACCCCCTCTTCGTGTC
GAGTCTAACACAGATGCGGAGCTGCCGTATGCGTTTCTTCTACCACAACC
CCCTCTTCGTGTCGAGTCTAACACAGATCATAGGGTCGATGGCCGCCTTC
TCGCAGACGTCTCCAGAAAAGGCGTTCGCTATCACTCACGCCACTGCTGT
GCATAGGAACAGGAGGCGATCTACGTACGAAGCGGACTCGTTGATGGAGA
TCATAGGGTCGATGGCCGCCTTCTCGCAGACGTCTCCAGAAAAGGCGTTC
GCTATCACTCACGCCACTGCTGTGCATAGGAACAGGAGGCGATCTACGTA
CGAAGCGGACTCGTTGATGGAGGGGGAGCCAGGCACCATCTCTAGCGCTA
CAGCTGTCGACGTGACGCCTGAGGTGGATACACCCGACGTGGATGGGTGG
CTCGTGTACGATGAGGAGACGGAGTTCGTCCGACAGGGCGTGATCAAGCC
CATGTCACTGGACTCGGGGAGCCAGGCACCATCTCTAGCGCTACAGCTGT
CGACGTGACGCCTGAGGTGGATACACCCGACGTGGATGGGTGGCTCGTGT
ACGATGAGGAGACGGAGTTCGTCCGACAGGGCGTGATCAAGCCCATGTCA
CTGGACTCGCCTCAAGAGACAGACGCGGAAGCTTGTCCGGCAGCTCATTC
AACGAGTTCCTCGGCGAGCAGGGTCATTCACGGGAACACCGGCTGGCGCA
TGTTCCACAACCGGTCACACAGACTGGTGCCCACGTATCCGCTGCACTTT
GTGGTCCCCGCCGCCATGTCGGACGCCGATGTCAGGCCTCAAGAGACAGA
CGCGGAAGCTTGTCCGGCAGCTCATTCAACGAGTTCCTCGGCGAGCAGGG
TCATTCACGGGAACACCGGCTGGCGCATGTTCCACAACCGGTCACACAGA
CTGGTGCCCACGTATCCGCTGCACTTTGTGGTCCCCGCCGCCATGTCGGA
CGCCGATGTCAGGGCGGTGGCCGCTTACCGCTGCAAGGGTCGTCTGCCGA
CGGTAACCTGGATGGACCCTCAAACGAAGGCCGTGCTCGCTCGATCCGCG
CAGCCCCTGGCGGGCCTGGGCGGCAACTCGTGAGGCGGTGGCCGCTTACC
GCTGCAAGGGTCGTCTGCCGACGGTAACCTGGATGGACCCTCAAACGAAG
GCCGTGCTCGCTCGATCCGCGCAGCCCCTGGCGGGCCTGGGCGGCAACTC
GTGA
back to top