mRNA_F-serratus_M_contig1487.3337.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1487.3337.1 vs. uniprot
Match: D7G645_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G645_ECTSI) HSP 1 Score: 574 bits (1479), Expect = 3.400e-189 Identity = 297/444 (66.89%), Postives = 356/444 (80.18%), Query Frame = 3
Query: 576 LEQSQNLLESPDEENKLRTTCDGCTLSKIKCDGGHPCKRCQRRKSECVYSEKKRCGPKRRRSSRXXXXXXXXXXMGXXAGGAHDGEGGPHGGVHKVLTSRERQFLSKFYGSVNKFIPLTNLTVLRDAMNPLPLNVIAGVTATEAEKNVHHARKAVLLGGVGVGAVFCGDASSAGAYMAQAQIHLKDCFDALLPEVVSCYLIMVVYHLHFLDHSKIFRYIGFAQQAYRELV-SSKQPVAAHLRDSVGMLSTFLHVACNSDIRVEEVDLRAETIPEPGTNQLSRILVIFSQVLLMLYRRFDPESAAKATPQKPVPSMESLAAMADEADVRLSMIEDPGSFAVIVLKTLRGYFLLLKGKEKEVLEKVAIPVAKALAADTGVLCFPLCWHMCQCMRAFLRRKGLHTVATSMDQVMDPLKQHLAYTSTRCGVAINVMSAYAGKTATTAP 1904
++++ +LL+ D+EN LRTTCD CT+ KIKCDGGHPCKRCQRR SECVY EKKRCGPKRR+ S G AG H GEGG GV +VLTSRE++FL+KFY SVNKFIPLT LTV+RDAMNPLPL+V+ G+ A+EAE+N +HARKAVLLG V VGAVFCGD SSAGAYM++AQIHLKDCFDAL+PEVVSCYL+MVVYHLHFLD SK++RYIGFAQQAYREL S+K V H+RDS+ +LSTFLHV CN +IR ++V LR ET PEPG LSRI+ +FS VLL LYR+ D AA+A+PQ+PVP+M +L AMA+EA++ LSM+EDPGSFAVIV+KTL+GYFLL+KGKE+ VL+ VA+PVAKAL AD VL FPLCW MCQC+ +FLRRKG H+VA SMD +M PL+ LAY + CGVA+NV+ YAGK T P
Sbjct: 37 VDRNVSLLDLNDDENNLRTTCDACTIGKIKCDGGHPCKRCQRRGSECVYREKKRCGPKRRKLSSRDDSDDDGSHGGSFAG--HLGEGGA--GV-RVLTSREQEFLAKFYSSVNKFIPLTCLTVIRDAMNPLPLDVVPGLAASEAEENTYHARKAVLLGCVAVGAVFCGDQSSAGAYMSRAQIHLKDCFDALIPEVVSCYLVMVVYHLHFLDRSKVYRYIGFAQQAYRELAQSNKLVVGGHVRDSLRVLSTFLHVTCNKEIRPQKVHLRGETNPEPGGGSLSRIIALFSHVLLQLYRKTDRVEAARASPQQPVPTMATLGAMANEAELLLSMMEDPGSFAVIVIKTLKGYFLLMKGKEQAVLDAVAMPVAKALEADPAVLNFPLCWTMCQCVSSFLRRKGCHSVAASMDAIMQPLRMTLAYANACCGVALNVVGVYAGKGITVTP 475
BLAST of mRNA_F-serratus_M_contig1487.3337.1 vs. uniprot
Match: A0A6H5J8L2_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8L2_9PHAE) HSP 1 Score: 573 bits (1476), Expect = 1.910e-185 Identity = 297/448 (66.29%), Postives = 357/448 (79.69%), Query Frame = 3
Query: 576 LEQSQNLLESPDEENKLRTTCDGCTLSKIKCDGGHPCKRCQRRKSECVYSEKKRCGPKRRRSSRXXXXXXXXXXMGXXAGGAHDGEGGPHGGVHKVLTSRERQFLSKFYGSVNKFIPLTNLTVLRDAMNPLPLNVIAGVTATEAEKNVHHARKAVLLGGVGVGAVFCGDASSAGAYMAQAQIHLKDCFDALLPEVVSCYLIMVVYHLHFLDHSKIFRYIGFAQQAYRELV-SSKQPVAAHLRDSVGMLSTFLHVACNSDIRVEEVDLRAETIPEPGTNQLSRILVIFSQVLLMLYRRFDPESAAKATPQKPVPSMESLAAMADEADVRLSMIEDPGSFAVIVLKTLRGYFLLLKGKEKEVLEKVAIPVAKALAADTGVLCFPLCW----HMCQCMRAFLRRKGLHTVATSMDQVMDPLKQHLAYTSTRCGVAINVMSAYAGKTATTAP 1904
++++ +LL+ D+EN LRTTCD CT+ KIKCDGGHPCKRCQRR SECVY EKKRCGPKRR+ S G AG H GEGG G +VLTSRE++FL+KFY SVNKFIPLT LTV+RDAMNPLPL+V+ G+ A+EAE+N +HARKAVLLG V VGAVFCGD +SAGAYM++AQIHLKDCFDAL+PEVVSCYL+MVVYHLHFLD SK++RYIGFAQQ YREL S+K V ++RDS+ +LSTFLHV CN++IR EEVDLRAET PEPG LSRI+ +FS VLL LYR+ D AA+A+PQKPVP++ +L AMA+EA++ LSM+EDPGSFAVIV+KTL+GYFLL+KGKE+ VL+ VA+PVAKAL AD VL FPLCW H CQC+ +FLRRKG H+VA SMD +M PL+ LAY + CGVA+NV+ YAGK T P
Sbjct: 163 VDRNVSLLDLNDDENNLRTTCDACTIGKIKCDGGHPCKRCQRRGSECVYREKKRCGPKRRKLSSRDDSDDDGSHGGNFAG--HLGEGG---GGFRVLTSREQEFLAKFYSSVNKFIPLTCLTVIRDAMNPLPLDVVPGLAASEAEENTYHARKAVLLGCVAVGAVFCGDQASAGAYMSRAQIHLKDCFDALIPEVVSCYLVMVVYHLHFLDRSKVYRYIGFAQQTYRELAQSNKLGVGEYVRDSLRVLSTFLHVTCNNEIRPEEVDLRAETNPEPGGGSLSRIIALFSHVLLQLYRKTDRVEAARASPQKPVPTLATLGAMANEAELLLSMMEDPGSFAVIVIKTLKGYFLLMKGKEQAVLDAVAMPVAKALEADPAVLNFPLCWTMWVHACQCVSSFLRRKGCHSVAASMDAIMQPLRLTLAYANACCGVALNVVGVYAGKGITVTP 605
BLAST of mRNA_F-serratus_M_contig1487.3337.1 vs. uniprot
Match: D7G644_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G644_ECTSI) HSP 1 Score: 498 bits (1281), Expect = 3.160e-163 Identity = 258/387 (66.67%), Postives = 311/387 (80.36%), Query Frame = 3
Query: 576 LEQSQNLLESPDEENKLRTTCDGCTLSKIKCDGGHPCKRCQRRKSECVYSEKKRCGPKRRRSSRXXXXXXXXXXMGXXAGGAHDGEGGPHGGVHKVLTSRERQFLSKFYGSVNKFIPLTNLTVLRDAMNPLPLNVIAGVTATEAEKNVHHARKAVLLGGVGVGAVFCGDASSAGAYMAQAQIHLKDCFDALLPEVVSCYLIMVVYHLHFLDHSKIFRYIGFAQQAYRELV-SSKQPVAAHLRDSVGMLSTFLHVACNSDIRVEEVDLRAETIPEPGTNQLSRILVIFSQVLLMLYRRFDPESAAKATPQKPVPSMESLAAMADEADVRLSMIEDPGSFAVIVLKTLRGYFLLLKGKEKEVLEKVAIPVAKALAADTGVLCFPLCWHM 1733
++++ +L + D+EN RTTCD CTL KIKCDGGHPC+RCQRR SECVY EKKRCGPKRR+ S +G AG H GEGG +VLTSRE++FL+KFY SVNKFIPLT +TV+RDAMNPLPL+V+ G+ A+EAE+N +HARKAVLLG V VGAVF GD +SAGAYM++AQIHLKDCFDAL+PEVV+CYL+MVVYHLHFLD SK++RYIGFAQQA REL S+K V H+RDS+ +LSTFLHV CN +IR EEVDLR ET PEPG LSRI+ +FS VLL LYR+ D AA+A+PQ+PVP+M +L AMA+EA++ LSM+EDPGSFAVIV+KTL+GYFLL+KGKE+ VL+ VA+PVAKAL AD VL FPLCW M
Sbjct: 39 VDRNVSLPDLNDDENNFRTTCDACTLGKIKCDGGHPCRRCQRRGSECVYREKKRCGPKRRKLSSRDDSDDDGNHVGSVAG--HLGEGGAG---FRVLTSREQEFLAKFYSSVNKFIPLTCVTVIRDAMNPLPLDVVPGLAASEAEENTYHARKAVLLGCVAVGAVFSGDQASAGAYMSRAQIHLKDCFDALIPEVVNCYLVMVVYHLHFLDRSKVYRYIGFAQQACRELAQSNKLGVGGHVRDSLRVLSTFLHVTCNKEIRPEEVDLRGETNPEPGGGSLSRIIALFSHVLLQLYRKTDRVEAARASPQQPVPTMATLGAMANEAELLLSMMEDPGSFAVIVIKTLKGYFLLMKGKEQAVLDAVAMPVAKALEADPAVLNFPLCWTM 420
BLAST of mRNA_F-serratus_M_contig1487.3337.1 vs. uniprot
Match: A0A836CK64_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK64_9STRA) HSP 1 Score: 194 bits (492), Expect = 2.030e-48 Identity = 135/434 (31.11%), Postives = 219/434 (50.46%), Query Frame = 3
Query: 603 SPDEENKLRTTCDGCTLSKIKCDGGHPCKRCQRRKSECVYSEKKRCGPKRRRSSRXXXXXXXXXXMGXXAGGAHDGEGGPHGGVH-------KVLTSRERQFLSKFYGSVNKFIPLTNLTVLRDAMNPLPLNVIAGVTATEAEKNVHHARKAVLLGGVGVGAVFCGDASSAGAYMAQAQIHLKDCFDALLPEVVSCYLIMVVYHLHFLDHSKIFRYIGFAQQAYRELVSSKQPVAAHLRDSVGMLSTFLHVACNSDIRVEEVDLRAETIPEPGTNQLSRILVIFSQVLLMLYRRFDPESAAKATPQKPVPSMESLAAMADEADVRLSMIEDPGSFAVIVLKTLRGYFLLLKGKEKEVLEKVAIPVAKALAADTGVLCFPLCWHMCQCMRAFLRRKGLHTVATSMDQVMDPLKQHLAYTSTRCGVAINVMSAYAG 1883
S E+ +R+ CD CT SKI+C GG PC+RC++R + EK+RCGPK++ +GG G + H L + E+++L +F +N ++P+ N +L A+ PLP A E +++ HA +A L G V +GA+ C + + Y +A++ LK+CFDA + E+ S +L++ +Y+LH LD++K+ RY GFA+Q+ REL +AA SV ML L++A + V + P + R L I S +++ +Y P+ + P+ S E L ++A E + + P +V++ L+GY LL G + + +++ VA+ +A + +L FPL W M C+ LRR G H VA + M PL L + S C V +++ YAG
Sbjct: 56 SNSEDENMRSACDSCTFSKIRCVGGRPCERCRKRGKD----EKRRCGPKKKEDGSSSPSR---------SGGGSFSRPGEYSVNHVPSTFDATSLNAAEKEWLRQFVLGLNAYLPVVNEGMLTLAVRPLPSG------AVEIDRHRRHACRAALWGSVSLGALVCKNEAEGARYNQRARLELKECFDAPVTELTSVFLVLTIYYLHRLDNAKLVRYAGFARQSLRELAFIPLDIAA----SVRMLQVSLYLAGAGEPPEVTVPTPRTMLHLPPSVAKQRCLHIISFLMMSIYTSIRPDDQ-RPFGTVPIVSDEHLLSLAGEIRGLVECTKAPDDMSVVIGCVLQGYLLLRLGHTADAI-RISETVAEMVAMNPTILQFPLTWTMSCCVLEGLRRFGRHAVAEKLIATMSPLAAGLPFASKCCSVGAELLAVYAG 464
BLAST of mRNA_F-serratus_M_contig1487.3337.1 vs. uniprot
Match: A0A835YRF7_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRF7_9STRA) HSP 1 Score: 191 bits (486), Expect = 5.900e-47 Identity = 148/490 (30.20%), Postives = 221/490 (45.10%), Query Frame = 3
Query: 615 ENKLRTTCDGCTLSKIKCDGGHPCKRCQRRKSECVYSEKKRCGPKRRRSSRXXXXXXXXXXMGXXAG----------GAHDG---------------EGGPHGGVHKV-------------------LTSRERQFLSKFYGSVNKFIPLTNLTVLRDAMNPLPL-NVIA---GVTAT-EAEKNVHHARKAVLLGGVGVGAVFCGDASSAGAYMAQAQIHLKDCFDALLPEVVSCYLIMVVYHLHFLDHSKIFRYIGFAQQAYRELVSSKQPVAAHLRDSVGMLSTFLHVACNSDIRVEEVDLRAETIP------------------------------------------EPGTNQLSRILVIFSQVLLMLYRRFDPESAAKATPQKPVPSMESLAAMADEADVRLSMI------------EDPGSFAVIVLKTLRGYFLLLKG--KEKEVLEKVAIPVAKALAADTGVLCFPLCWHMCQCMRAFLRRKG 1769
E LRTTCDGCT+SK++C+G PC RC+RR ECVYSEK+R P + +G G + DG G HG + V L++ E++FLS F ++N F+ + + LR+AM P PL +V A G TA E E + HA KAVLLG V +GA++C + HL+DCFDA++PE +CYL++V+YH+H LD +++FRY+GFAQQ++ EL Q + ++ +LS LHV+C+S I ++ V A P + T SR+L I ++ L+ + D S + Q +E+L EAD +S P A++ +K + GYF L G + ++L +VA P A+ +L FP+ WH+ +C+R L + G
Sbjct: 80 EWNLRTTCDGCTVSKVRCNGKKPCARCERRNEECVYSEKRRQKPA---GAPRVPVVVTVPPIGAVGGESTKYADRRPSSEDGAPAVTVSAPYPSVHINGAAHGQIPAVAGTPSPQTVPSQQSAAAVVLSADEQRFLSAFLSTINSFMRVASAATLREAMLPAPLLDVTALAMGQTAPREREISRFHACKAVLLGSVALGAMYCXXXXXXXXXXXXXRAHLRDCFDAVIPETAACYLLLVLYHVHVLDSARMFRYMGFAQQSFAELSLQVQAANCEISAAIALLSALLHVSCDSAISLDPVADAASAFPRGKQRSASAGGPCGAGXXXXXLGAACSGGACXXKGGGGSTLDDYSTGSNSRVLTILARALVHI----DNTSRGETDGQSEEAMLEALC----EADQLVSRALARSQTGAPDAPPPPSDLAILAVKVMAGYFRLQTGGLSKADMLSQVAAPCLDAVRRTPMLLNFPMGWHLARCVRTMLMQHG 558
BLAST of mRNA_F-serratus_M_contig1487.3337.1 vs. uniprot
Match: A0A6H5K1B7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1B7_9PHAE) HSP 1 Score: 60.1 bits (144), Expect = 2.590e-5 Identity = 25/44 (56.82%), Postives = 33/44 (75.00%), Query Frame = 3
Query: 624 LRTTCDGCTLSKIKCDGGHPCKRCQRRKSECVYSEKKRCGPKRR 755
LR +CD CT SK KC G PC RC++R+ EC +S+++RCGPK R
Sbjct: 23 LRKSCDTCTSSKTKCQGSIPCDRCKKRRIECKFSKRRRCGPKAR 66 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1487.3337.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1487.3337.1 >prot_F-serratus_M_contig1487.3337.1 ID=prot_F-serratus_M_contig1487.3337.1|Name=mRNA_F-serratus_M_contig1487.3337.1|organism=Fucus serratus male|type=polypeptide|length=876bp MATPQQFASLNISTAESNRRSNGLVLPGRGQLRLKDKILMSAGCNTGDVNback to top mRNA from alignment at F-serratus_M_contig1487:183537..198409+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1487.3337.1 ID=mRNA_F-serratus_M_contig1487.3337.1|Name=mRNA_F-serratus_M_contig1487.3337.1|organism=Fucus serratus male|type=mRNA|length=14873bp|location=Sequence derived from alignment at F-serratus_M_contig1487:183537..198409+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1487:183537..198409+ >mRNA_F-serratus_M_contig1487.3337.1 ID=mRNA_F-serratus_M_contig1487.3337.1|Name=mRNA_F-serratus_M_contig1487.3337.1|organism=Fucus serratus male|type=CDS|length=5256bp|location=Sequence derived from alignment at F-serratus_M_contig1487:183537..198409+ (Fucus serratus male)back to top |