prot_F-serratus_M_contig1461.3251.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1461.3251.1
Unique Nameprot_F-serratus_M_contig1461.3251.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length285
Homology
BLAST of mRNA_F-serratus_M_contig1461.3251.1 vs. uniprot
Match: A0A6H5K8T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8T1_9PHAE)

HSP 1 Score: 250 bits (638), Expect = 8.950e-74
Identity = 135/293 (46.08%), Postives = 178/293 (60.75%), Query Frame = 0
Query:    1 MLVIMRLPEECTEEQRRAINAAVAESRQDCREVKLKWKFDAARAPYGLVERLIASCHAIGAVEQDVCWRYGALFMSRQMTWRHGKQVRLFKFVVC---YDDC--MLTLRMIGPLSNDRVWAALRYVASAMVILSMEWPGVQWEGWPDCPNHPQARMYLTPPGEARIGGHLLDQEPPDAHSMVCDCQRKANGVLQLVYRRLGTVVDTREGHSVEGFEEENTSPGK----LECCREAFHFWRPRAWQTAASLGTLAVTIFCSVTIAGIVEEKNTLWITSLSVVALLLMAALIVSV 284
            MLVIMRL E C E QR   +   ++  +D   V LKW+FD A  PYGL+ERLIASCH +G VE   CWRYGA+F S  M +  G+ VR +K  +    Y++   + T ++ GPL ++RVW A+RYVASAM+ LS EWPGV W GW DC  HP   +Y+    EAR+G  LL    PDA    CDC  +  GVL+L    LG V+DT +    EG  +E+T   +      C REAF  W P AW+TA  L  LAV +F +  +AGIVE+K TLW +SL V  +L++ +++ SV
Sbjct:  483 MLVIMRLSETCNEHQRTLFDGLASKMPRD--RVTLKWEFDKAGPPYGLIERLIASCHVLGEVETGACWRYGAVFQSHDMRFVEGRNVRFYKIALSMTSYNESERVFTAKVFGPLDSERVWVAIRYVASAMINLSKEWPGVLWTGWLDCEKHPSQHLYMASSVEARVGDPLLPAAAPDARR--CDCLLEPGGVLRLAVEELGPVIDTGKD-PFEGLSDEDTEDPEETVTCNCVREAFGHWLPHAWRTAKWLFGLAVVLFTTAVVAGIVEDKETLWKSSLGVCCVLMVFSVVASV 770          
BLAST of mRNA_F-serratus_M_contig1461.3251.1 vs. uniprot
Match: D7FVX5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVX5_ECTSI)

HSP 1 Score: 216 bits (550), Expect = 3.320e-60
Identity = 128/302 (42.38%), Postives = 167/302 (55.30%), Query Frame = 0
Query:    1 MLVIMRLPEECTEEQRRAINAAVAE--SRQDCREVKLKWKFDAARAPYGLVERLIASCHAIGAVEQDVCWRYGALFMSRQMTWRHGKQVRLFKFVVCYDD------CMLTLRMIGPLSNDRVWAALRYVASAMVILSMEWPGVQWEGWPDCPNHPQARMYLTPPGEARIGGHLLDQEPPDAHSMVCDCQRKANGVLQLVYRRLGTVVDTREG------HSVEG---FEEENTSPGKLEC------CREAFHFWRPRAWQTAASLGTLAVTIFCSVTIAGIVEEKNTLWITSLSVVALLLMAA 279
            MLVIMRLP+ C E  +  +   V +   R    EV LKW+FD A A +GLVER+IASCH +G+V   +CWRYGA+F S       G    L+ FV+ YD+       +L + M GP + DR+WAALR+VAS++V  S  WPGV+WEG P C  H + RMY   P EARIG  +L    P     VCDC       ++LV  RLGT++DT++       H  EG     ++N       C      C   FH WRP AW+TAA  GT+A T+F +V  A  VE ++T W   +  V LLL  A
Sbjct:  789 MLVIMRLPDTCEENIQGELQELVRDLSERHGGNEVTLKWRFDGAGASHGLVERVIASCHEVGSVRSGLCWRYGAVFQSYARA-DDGGLNWLYSFVIRYDEEVGSGERVLAVTMFGPTAEDRLWAALRWVASSVVNTSTGWPGVRWEGGPACAIHARGRMYFKTPIEARIGDPILTDPDPRTAPNVCDCYTTEGNAMRLVLERLGTIIDTQKDDPFGHLHHDEGGSAISQDNRGEEAGGCAAMSASCSRVFHAWRPLAWKTAAGFGTVAATLFGAVDSA--VEPEDTAWKVCVGFVTLLLFGA 1087          
BLAST of mRNA_F-serratus_M_contig1461.3251.1 vs. uniprot
Match: A0A6H5JW02_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW02_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 7.320e-55
Identity = 120/263 (45.63%), Postives = 144/263 (54.75%), Query Frame = 0
Query:    1 MLVIMRLPEECTEEQRRAINAAVAESRQDCREVKLKWKFDAARAPYGLVERLIASCHAIGAVEQDVCWRYGALFMSRQMTWRHGKQVRLFKFVVCYDDCM------LTLRMIGPLSNDRVWAALRYVASAMVILSMEWPGVQWEGWPDCPNHPQARMYLTPPGEARIGGHLLDQEPPDAHSMVCDCQRKANGVLQLVYRRLGTVVDTRE--GHSVEGFEEENTSPGKLEC--CREAFHFWRPRA-----WQTAASLGTLAVTI 248
            MLVIMRLPE C  E       +    R   REV L W+FD+A  PYGLVER+IASCHA+G VE  +CWRYGA+F SR M    G   RL+ FVV YD  +      L++RM GPL ++RVWAALR+VAS++V +S +WPGV WEGWP C    + R Y     +A IG  LL      A    CDC      VL+LV  RLG VVDT+      VEG         K  C  C+E F    P A     W   ASL  L V +
Sbjct:  631 MLVIMRLPETCGAEHELQELISDQMRRHSDREVTLMWRFDSAGPPYGLVERVIASCHAVGVVEMGLCWRYGAVFQSRAMATSDGSD-RLYTFVVRYDSAVGNERRILSMRMFGPLQDNRVWAALRWVASSVVNISKDWPGVLWEGWPQCARRHRNRTYFATSDKASIGDFLLADAATGATRRGCDCLAVEGTVLRLVLERLGKVVDTQAPPASDVEGVRRT-----KAACAGCKETFSVLEPSAGSAAGWCWGASLAFLGVGV 887          
BLAST of mRNA_F-serratus_M_contig1461.3251.1 vs. uniprot
Match: D8LJS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS7_ECTSI)

HSP 1 Score: 62.8 bits (151), Expect = 2.450e-7
Identity = 35/117 (29.91%), Postives = 58/117 (49.57%), Query Frame = 0
Query:   45 PYGLVERLIASCHAIGAVEQDVCWRYGALFMSRQMTWRHG-----KQVRLFKFVVCYD--DCMLTLRMIGPLSNDRVWAALRYVASAMVILSMEWPGVQWEGWPDCPNHPQARMYLT 154
            P G +E+++  C  +G V+    WRYG L         HG      + R F  VV Y   D  L  ++ G +S    W A  YV SA+ ++ +++PG+ W+G+ +CP H    +++ 
Sbjct:  810 PPGAIEKVLTRCCGLGGVQ--TFWRYGVLV--------HGGLGVQDERRTFAVVVEYSSTDNELIAQIFGDVSTPGPWGATSYVMSAVSLMLVDFPGLGWKGYLECPQHGDGMLFVN 916          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1461.3251.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5K8T1_9PHAE8.950e-7446.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVX5_ECTSI3.320e-6042.38LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JW02_9PHAE7.320e-5545.63Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LJS7_ECTSI2.450e-729.91LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..237
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 285..285
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 238..258
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 264..284
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 259..263
NoneNo IPR availableTMHMMTMhelixcoord: 236..258
NoneNo IPR availableTMHMMTMhelixcoord: 265..284

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1461contigF-serratus_M_contig1461:208943..210361 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1461.3251.1mRNA_F-serratus_M_contig1461.3251.1Fucus serratus malemRNAF-serratus_M_contig1461 208943..210377 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1461.3251.1 ID=prot_F-serratus_M_contig1461.3251.1|Name=mRNA_F-serratus_M_contig1461.3251.1|organism=Fucus serratus male|type=polypeptide|length=285bp
MLVIMRLPEECTEEQRRAINAAVAESRQDCREVKLKWKFDAARAPYGLVE
RLIASCHAIGAVEQDVCWRYGALFMSRQMTWRHGKQVRLFKFVVCYDDCM
LTLRMIGPLSNDRVWAALRYVASAMVILSMEWPGVQWEGWPDCPNHPQAR
MYLTPPGEARIGGHLLDQEPPDAHSMVCDCQRKANGVLQLVYRRLGTVVD
TREGHSVEGFEEENTSPGKLECCREAFHFWRPRAWQTAASLGTLAVTIFC
SVTIAGIVEEKNTLWITSLSVVALLLMAALIVSVL
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