prot_F-serratus_M_contig1450.3209.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1450.3209.1
Unique Nameprot_F-serratus_M_contig1450.3209.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length364
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1450.3209.1 vs. uniprot
Match: D7G298_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G298_ECTSI)

HSP 1 Score: 226 bits (575), Expect = 5.710e-69
Identity = 125/206 (60.68%), Postives = 155/206 (75.24%), Query Frame = 0 
Query:  106 RRRTKTPLESGLEKITLCASSFPWTFGKQCIKGFQRFLQMRPIEFKEQLQMSLHIYLRPSEAAAVASYFDVEDVGSVNGEFFARWFVYTGNNTRQERLRKQAIEMHEEEELQKQRWKDEDSRRRAADEAAVSVEFSPRDRAAAKEVLGKVAVYYHDQRTGREAAQRDFAGSLRPVDFRDQLSRSFKIRLTDQQFSALFQDIEKNED 311
            R + ++ LESGL K+TLCASSF W  GKQCI+GFQR +QM P EF+EQLQMSLHIYLRPSE AAVA +FDV+ VGSVNGE F RWF+  G ++R+ERLR QA         +++  + E +R+R A+ AAV VEFS  DRA+A  +LGK+A+ YHDQRTG EAAQRDFA +L P+ FR QL RSF IRLTD+QF+ALF  ++ N D
Sbjct:   35 RWKKQSALESGLAKLTLCASSFAWMHGKQCIRGFQR-VQMLPAEFREQLQMSLHIYLRPSEGAAVARFFDVQQVGSVNGEVFVRWFLQAGLDSREERLRAQAAVXXXXXXXRREGERAEVARKRDANTAAVEVEFSAEDRASALLLLGKIALSYHDQRTGHEAAQRDFACALGPMAFRLQLFRSFGIRLTDRQFAALFDVMDINRD 239
[Close]
BLAST of mRNA_F-serratus_M_contig1450.3209.1 vs. uniprot
Match: A0A7S2BNH0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BNH0_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 7.840e-8
Identity = 54/191 (28.27%), Postives = 96/191 (50.26%), Query Frame = 0 
Query:  174 FDVEDVGSVNG-EFFARWFVYTGNNTRQERLRKQAIEMHEEEELQKQRWKDEDSRRRAADEAAVSVEFSPRDRAAAKEVLGKVAVYYHDQRTGREAAQRDFAGSLRPVDFRDQLSRSFKIRLTDQQFSALFQDIEKNEDGTVDGSKFLRYFFGLINRERTKEFRQGRTNRYVQARNLRLHKLPTISPILGR 363
            FD    G + G EF   +F    +    +R+R+Q I   EE    K+  +D+ S  +  ++  +    + +DR +    L KVA ++       + A   F+  L P+  R QL  SF+I L+D + +AL +D++++ DGT+DGS+F+  FF L   ++  E  +   +   +A++L     P+ +  LGR
Sbjct:    3 FDDNMDGYIEGYEFTLGFFRMALDAQSADRMRRQNIAFEEEMAKLKEE-RDKISEIKFKNQCLLEAPHTDKDRDSYYAKLSKVAKWWRASEYLDKIALESFSCILTPMQLRRQLFHSFEIVLSDGELAALCKDMDRDGDGTLDGSEFMILFFRLQREQQDAEAARKEADNTRRAKHLPQFPGPSPNAALGR 192
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1450.3209.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G298_ECTSI5.710e-6960.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2BNH0_9STRA7.840e-828.27Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 204..224
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 153..326

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1450contigF-serratus_M_contig1450:154102..176719 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1450.3209.1mRNA_F-serratus_M_contig1450.3209.1Fucus serratus malemRNAF-serratus_M_contig1450 153147..176770 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1450.3209.1 ID=prot_F-serratus_M_contig1450.3209.1|Name=mRNA_F-serratus_M_contig1450.3209.1|organism=Fucus serratus male|type=polypeptide|length=364bp
MSRLTRDGTAEPVSRDQILRHARGQGNIHFPVQLTTSRIGNLPYTVDPYS
AICDDHTCMNPYRENSTTMRQPNPFSPEQNRMATKTASVERILRTARAVG
CPSATRRRTKTPLESGLEKITLCASSFPWTFGKQCIKGFQRFLQMRPIEF
KEQLQMSLHIYLRPSEAAAVASYFDVEDVGSVNGEFFARWFVYTGNNTRQ
ERLRKQAIEMHEEEELQKQRWKDEDSRRRAADEAAVSVEFSPRDRAAAKE
VLGKVAVYYHDQRTGREAAQRDFAGSLRPVDFRDQLSRSFKIRLTDQQFS
ALFQDIEKNEDGTVDGSKFLRYFFGLINRERTKEFRQGRTNRYVQARNLR
LHKLPTISPILGR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair