prot_F-serratus_M_contig145.3180.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig145.3180.1
Unique Nameprot_F-serratus_M_contig145.3180.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length341
Homology
BLAST of mRNA_F-serratus_M_contig145.3180.1 vs. uniprot
Match: D7FRT4_ECTSI (Nsp1_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT4_ECTSI)

HSP 1 Score: 294 bits (752), Expect = 2.160e-94
Identity = 157/225 (69.78%), Postives = 187/225 (83.11%), Query Frame = 0
Query:  118 SLTFPEAGGSAPTSQEEPKAKYMNMTVEEVINSWNVLLEQDATTFTNEAVKVAEWDGNLRETQAELFSLTDDVQKLVFGQQELERNMKTIEGEQAQLNKTLDQLEDQADKLMQEQRGRTTDEGDMERENINHIAQTVDRQLGAMVDTLKSLVDQVNAS-ASSNFASAGGGGAVG-DSNARKIVRILNAHHHSLSWLEESSKKMLVDTSDVRRRIGLPCDAVLIPP 340
            +LT   AGG+  T QE+P  +YMNMTVEE++NSWNV L+QDATTFTNEAVKV++WDG LRETQ+ELFSL DDVQKLV GQQ+L R+MK IEGEQ+ L+KTLDQLE QA+KLM +QRG++ +EGD+ERE    IAQTVD QL  MVDTLKSLVDQVN+S +SS+F + GG G  G DSNARKIVRILNAHHHSL+WLEE+SK ML D +DV RR+G+P DA L+PP
Sbjct:  140 TLTLAAAGGAGTTEQEQPPEQYMNMTVEEIVNSWNVELDQDATTFTNEAVKVSDWDGVLRETQSELFSLADDVQKLVLGQQDLARSMKAIEGEQSHLDKTLDQLEGQAEKLMHDQRGQSPEEGDVEREQAFQIAQTVDMQLAGMVDTLKSLVDQVNSSTSSSSFGAVGGRGDTGGDSNARKIVRILNAHHHSLTWLEETSKTMLQDAADVGRRLGMPSDAALLPP 364          
BLAST of mRNA_F-serratus_M_contig145.3180.1 vs. uniprot
Match: A0A6H5JT70_9PHAE (Nsp1_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT70_9PHAE)

HSP 1 Score: 268 bits (685), Expect = 2.250e-82
Identity = 145/201 (72.14%), Postives = 170/201 (84.58%), Query Frame = 0
Query:  142 MTVEEVINSWNVLLEQDATTFTNEAVKVAEWDGNLRETQAELFSLTDDVQKLVFGQQELERNMKTIEGEQAQLNKTLDQLEDQADKLMQEQRGRTTDEGDMERENINHIAQTVDRQLGAMVDTLKSLVDQVNASASSNFASA--GGGGAVGDSNARKIVRILNAHHHSLSWLEESSKKMLVDTSDVRRRIGLPCDAVLIPP 340
            MTVEE++NSWNV L+QDATTFTNEAVKV++WD  LRETQ+ELFSL DDVQKLV GQQ+L R+MK IEGEQ+ L+KTLDQLE QA+KLM++QRG++ +EGD+ERE    IAQTVD QL  MVDTLKSLVDQVN+S SS+   A  G G A GDSNARKIVRILNAHHHSL+WLEE+SK ML DT+DV RR+G+P DA L+PP
Sbjct:  320 MTVEEIVNSWNVELDQDATTFTNEAVKVSDWDVVLRETQSELFSLADDVQKLVLGQQDLARSMKAIEGEQSHLDKTLDQLEGQAEKLMRDQRGQSPEEGDVEREQAFQIAQTVDMQLAGMVDTLKSLVDQVNSSTSSSSIGAVGGRGDAGGDSNARKIVRILNAHHHSLTWLEETSKTMLQDTADVGRRLGMPSDAALLPP 520          
BLAST of mRNA_F-serratus_M_contig145.3180.1 vs. uniprot
Match: A0A7S3XTG9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTG9_HETAK)

HSP 1 Score: 127 bits (319), Expect = 1.220e-31
Identity = 77/194 (39.69%), Postives = 111/194 (57.22%), Query Frame = 0
Query:  137 AKYMNMTVEEVINSWNVLLEQDATTFTNEAVKVAEWDGNLRETQAELFSLTDDVQKLVFGQQELERNMKTIEGEQAQLNKTLDQLEDQADKLMQEQRGRTTDEGDMERENINHIAQTVDRQLGAMVDTLKSLVDQVNASASSNFASAGGGGAVGDSN-ARKIVRILNAHHHSLSWLEESSKKMLVDTSDVRRRI 329
            A+Y   TV+E++  W V LEQD   F  +A +VA WD  LRE Q  L S +D V +L+ GQ EL+R + T++  Q +L  TL  LE Q D+  +    R  D+ D+ERE    +A   D++LG ++D L++L D +NA         G    V D+N   KI+RILNAHH SL+WLE  +  +  + + V RR+
Sbjct:    7 AEYQAKTVDEILGDWGVRLEQDVAAFARQAARVAAWDQALREHQEALGSASDRVHRLLLGQAELDRTLDTVQAYQGELEATLGALEAQVDEQFRRCAARAPDDADLERERAYQLAVATDQRLGGVLDGLRALADDINA---------GFDRQVDDANPVSKILRILNAHHQSLAWLERQASGLDRELAQVGRRM 191          
BLAST of mRNA_F-serratus_M_contig145.3180.1 vs. uniprot
Match: A0A8K1CMM0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMM0_PYTOL)

HSP 1 Score: 132 bits (333), Expect = 3.630e-31
Identity = 77/202 (38.12%), Postives = 125/202 (61.88%), Query Frame = 0
Query:  129 PTSQEEPKAKYMNMTVEEVINSWNVLLEQDATTFTNEAVKVAEWDGNLRETQAELFSLTDDVQKLVFGQQELERNMKTIEGEQAQLNKTLDQLEDQADKLMQEQRGRTTDEGDMERENINHIAQTVDRQLGAMVDTLKSLVDQVNASASSNFASAGGGGAVGDSN-ARKIVRILNAHHHSLSWLEESSKKMLVDTSDVRRRI 329
            P   E+P A YM  T+EE+IN W+  LE++A TFTNEAVKV++WDG L ++Q +L  L  DV+++   Q+EL+ N+ TI   Q +L  TL+QLE+  DK+ + Q  +     D+ERE +   +  +D QL AM+ TLK  V+++N + +             DSN A +I+++LN HH+SL W+E ++ ++  + + + R++
Sbjct:  317 PAPTEQPPADYMGKTIEEIINMWSEQLERNADTFTNEAVKVSQWDGELMDSQKKLGELASDVRRIQVAQKELDTNLDTIFAYQMELKSTLEQLENSVDKMYESQ-DQMPVAADIEREQMLQTSVDIDDQLNAMMTTLKETVEKLNKAQND---------VTDDSNPAVQIMKVLNVHHNSLQWIEGNAGRINREIAQISRKL 508          
BLAST of mRNA_F-serratus_M_contig145.3180.1 vs. uniprot
Match: F0YBX4_AURAN (Nsp1_C domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBX4_AURAN)

HSP 1 Score: 103 bits (257), Expect = 7.150e-23
Identity = 64/180 (35.56%), Postives = 98/180 (54.44%), Query Frame = 0
Query:  144 VEEVINSWNVLLEQDATTFTNEAVKVAEWDGNLRETQAELFSLTDDVQKLVFGQQELERNMKTIEGEQAQLNKTLDQLEDQADKLMQEQRGRTTDEGDMERENINHIAQTVDRQLGAMVDTLKSLVDQVNASASSNFASAGGGGAVGDSNARKIVRILNAHHHSLSWLEESSKKMLVDTS 323
            VEE+IN W   LE D   F  +A K+  W+  +R +QAE+  ++   +KLV  QQ  E+ +  +   Q  L+  LD +E   D L      R   + D+ERE+   ++  ++ QLGAM+D LK LV ++N    S         A+G+  AR I++I+NAHH SL++L   ++KM  D S
Sbjct:    1 VEEIINGWKKSLESDCAAFQLQAEKLRSWENEIRSSQAEIVEVSSYAEKLVISQQRTEKVLTEVRAYQDDLDADLDAMERHVDDLFARSATRPPLDADVEREHAYDLSVKLENQLGAMLDQLKDLVVKLNVQHDS---------ALGEEPARDIMKIVNAHHQSLAYLNAKAQKMDADVS 171          
BLAST of mRNA_F-serratus_M_contig145.3180.1 vs. uniprot
Match: L8H349_ACACA (Nuclear pore glycoprotein p62, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H349_ACACA)

HSP 1 Score: 92.8 bits (229), Expect = 4.320e-17
Identity = 61/193 (31.61%), Postives = 109/193 (56.48%), Query Frame = 0
Query:  127 SAPTSQEEPKAKYMNMTVEEVINSWNVLLEQDATTFTNEAVKVAEWDGNLRETQAELFSLTDDVQKLVFGQQELERNMKTIEGEQAQLNKTLDQLEDQADKLMQEQRGRTTDEG-DMERENINHIAQTVDRQLGAMVDTLKSLVDQVNASASSNFASAGGGGAVGDSNARKIVRILNAHHHSLSWLEESSKKM 318
            SA   + +  A   N T EE++N W   LE    TF  +A+++++WD  L +   ++ +L   V+K+   Q+ L+ N++ I  +Q +L++ L+QLE++ DK+   +       G D ERE+   +A+ ++  L  M +TLK  ++++NA+ +S         A  D+   +IV ILNAH HSL W+E++S ++
Sbjct:  356 SAKAKEIQVTAALKNKTFEEIMNMWGRELEDQTITFRKQALELSKWDKMLLDNSGKIMALHGSVKKVEVAQKTLDSNLEIISRQQDELHQLLEQLENEVDKVYTARTSNGQLGGADSERESGYALAEEINSDLDQMANTLKDHINKLNAAHTS--------AADSDNPVYQIVEILNAHLHSLQWVEDNSNQL 540          
BLAST of mRNA_F-serratus_M_contig145.3180.1 vs. uniprot
Match: A0A7S3JQS9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JQS9_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 9.520e-16
Identity = 60/194 (30.93%), Postives = 99/194 (51.03%), Query Frame = 0
Query:  135 PKAKYMNMTVEEVINSWNVLLEQDATTFTNEAVKVAEWDGNLRETQAELFSLTDDVQKLVFGQQELERNMKTIEGEQAQLNKTLDQLEDQADKLMQEQRGRTTDEGDMERENINHIAQTVDRQLGAMVDTLKSLVDQVNASASSNFASAGGGGAVG---DSNARKIVRILNAHHHSLSWLEESSKKMLVDTSDV 325
            P AK    TVE++++ W   L  +   F  +A  + EW+  +R  Q ++  ++   ++L   QQ  ER +  +   Q +L+  L+ +E Q D        R   + D+ERE    +A  ++ +L AM+D LK LV Q+NA    +       G VG   D ++R IV+ILNAHH SL++L   + ++  D S +
Sbjct:  183 PSAKLRQKTVEKIVHGWKETLTANLDDFEKQADTLREWENEIRAAQRDIVQVSRYAERLYIEQQRTERILDEVRAYQDELDANLEGMERQVDDHFARAASRAPLDADIEREQTYDLAIDLEIRLNAMLDQLKQLVTQLNARQDLDS------GTVGTSIDPDSRDIVKILNAHHQSLAFLNTKASEIDTDVSSL 370          
BLAST of mRNA_F-serratus_M_contig145.3180.1 vs. uniprot
Match: A0A830BFV5_9LAMI (Nuclear pore complex protein nup62 n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830BFV5_9LAMI)

HSP 1 Score: 87.8 bits (216), Expect = 1.710e-15
Identity = 60/178 (33.71%), Postives = 101/178 (56.74%), Query Frame = 0
Query:  143 TVEEVINSWNVLLEQDATTFTNEAVKVAEWDGNLRETQAELFSLTDDVQKLVFGQQELERNMKTIEGEQAQLNKTLDQLEDQADKLMQEQRGRTTDEGDME-RENINHIAQTVDRQLGAMVDTLKSLVDQVNASASSNFASAGGGGAVGDSNAR--KIVRILNAHHHSLSWLEESSKK 317
            TVEE+I  WN  L++    F  +A  +A+WD  + + +  L  L  +V K+V  Q  LER ++ IE  Q +++K L  +E++A+++ +E+RG   D+     R+ +   A+ V+R+L  M + +KS+++ +NA    N ASAGG     D       +VRILN    SL W++E +K+
Sbjct:  285 TVEEIIKEWNAELQERTGKFRKQANAIADWDRRILQNRDILLRLETEVAKVVETQGSLERQLELIETHQDEVDKALQSMEEEAERMYREERGLLLDDDAASTRDAMYEQAEVVERELEQMTEQIKSIINTLNA----NQASAGGELEASDGMTPLDAVVRILNNQLSSLMWVDEKAKE 458          
BLAST of mRNA_F-serratus_M_contig145.3180.1 vs. uniprot
Match: A0A8K0DZ81_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0DZ81_9ROSA)

HSP 1 Score: 84.0 bits (206), Expect = 4.350e-15
Identity = 64/222 (28.83%), Postives = 114/222 (51.35%), Query Frame = 0
Query:  120 TFPEAGGSAPTSQEEPKAKYMNMTVEEVINSWNVLLEQDATTFTNEAVKVAEWDGNLRETQAELFSLTDDVQKLVFGQQELERNMKTIEGEQAQLNKTLDQLEDQADKLMQEQRGRTTD-EGDMERENINHIAQTVDRQLGAMVDTLKSLVDQVNASASSNFASAGGGGAVGDSNARKIVRILNAHHHSLSWLEESSKKMLVDTSDVRRRIGLPCDAVLIPP 340
            T   A  + P    E K K    TVEE++  WN  L++ A  F  +A  +A+WD  + + +  L  L  +V K+V  Q  LER ++ IE  Q +++K L  +E++A+++ +++RG   D E    R+ +   A+ ++R+L  M + +KS++  +NA+   +  +  G   +       +VRILN    SL W++E +++       V  + G P D  L+ P
Sbjct:   32 TSSSAISTVPKLPSEIKGK----TVEEILKEWNSELQERAGKFRKQANAIADWDRRILQNRDVLLRLEIEVAKVVESQANLERQLELIETHQDEVDKALQSIEEEAERIYKDERGLLLDDEAASTRDAMYEQAEFIERELEQMTEHIKSIIQTLNANQGGDIDANDGINPLD-----VVVRILNNQLSSLMWIDEKAEEFSSRIQKVASQ-GSPADRQLMDP 243          
BLAST of mRNA_F-serratus_M_contig145.3180.1 vs. uniprot
Match: A0A2G3AMF6_CAPAN (nuclear pore complex protein NUP62 n=4 Tax=Capsicum TaxID=4071 RepID=A0A2G3AMF6_CAPAN)

HSP 1 Score: 87.0 bits (214), Expect = 4.370e-15
Identity = 57/191 (29.84%), Postives = 105/191 (54.97%), Query Frame = 0
Query:  128 APTSQEEPKAKYMNMTVEEVINSWNVLLEQDATTFTNEAVKVAEWDGNLRETQAELFSLTDDVQKLVFGQQELERNMKTIEGEQAQLNKTLDQLEDQADKLMQEQRGRTTD-EGDMERENINHIAQTVDRQLGAMVDTLKSLVDQVNASASSNFASAGGGGAVGDSNARKIVRILNAHHHSLSWLEESSKK 317
            A TS  +  ++    +VEE+I  WN  L++    F  +A  +AEWD  + + +  L  L  +V K+V  Q  LER ++ IE  Q +++K L  +E++A+++ +++RG   D E    R+++   A+ V+R+L  M + +KS+++ +NAS      +  G   +       +VRILN    SL W++E +++
Sbjct:  535 AVTSTPKLPSEITGKSVEEIIKEWNAELQERTAKFRKQAHAIAEWDKRILQNRDILLKLESEVAKVVETQDSLERQLELIETHQDEVDKALQSMEEEAERIYKDERGVILDDEAASTRDSMYEQAEFVERELEKMTEQIKSIINTLNASQGGELEATDGMTPID-----VVVRILNNQLSSLMWIDEKAEE 720          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig145.3180.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRT4_ECTSI2.160e-9469.78Nsp1_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5JT70_9PHAE2.250e-8272.14Nsp1_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A7S3XTG9_HETAK1.220e-3139.69Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8K1CMM0_PYTOL3.630e-3138.12Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
F0YBX4_AURAN7.150e-2335.56Nsp1_C domain-containing protein (Fragment) n=1 Ta... [more]
L8H349_ACACA4.320e-1731.61Nuclear pore glycoprotein p62, putative n=1 Tax=Ac... [more]
A0A7S3JQS9_9STRA9.520e-1630.93Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A830BFV5_9LAMI1.710e-1533.71Nuclear pore complex protein nup62 n=1 Tax=Phtheir... [more]
A0A8K0DZ81_9ROSA4.350e-1528.83Uncharacterized protein n=1 Tax=Rhamnella rubriner... [more]
A0A2G3AMF6_CAPAN4.370e-1529.84nuclear pore complex protein NUP62 n=4 Tax=Capsicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 197..231
NoneNo IPR availableGENE3D1.20.5.170coord: 170..232
e-value: 7.6E-6
score: 27.7
NoneNo IPR availablePANTHERPTHR12084:SF0NUCLEOPORIN 62-LIKEcoord: 2..316
IPR007758Nucleoporin, NSP1-like, C-terminalPFAMPF05064Nsp1_Ccoord: 130..238
e-value: 1.5E-16
score: 60.2
IPR026010Nucleoporin NSP1/NUP62PANTHERPTHR12084NUCLEAR PORE GLYCOPROTEIN P62-RELATEDcoord: 2..316

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig145contigF-serratus_M_contig145:74088..82778 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig145.3180.1mRNA_F-serratus_M_contig145.3180.1Fucus serratus malemRNAF-serratus_M_contig145 74088..82778 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig145.3180.1 ID=prot_F-serratus_M_contig145.3180.1|Name=mRNA_F-serratus_M_contig145.3180.1|organism=Fucus serratus male|type=polypeptide|length=341bp
PATGFSFGSATPGTAAASAPAPAAAASASASSSSATPAPAAPSAGGFLFG
TPDSGASTAPAPAAPSTGFFFESAAPAAAPTPASAPEKAAGAPAGGGLTG
TGAAGAGAQAGGAEGSLSLTFPEAGGSAPTSQEEPKAKYMNMTVEEVINS
WNVLLEQDATTFTNEAVKVAEWDGNLRETQAELFSLTDDVQKLVFGQQEL
ERNMKTIEGEQAQLNKTLDQLEDQADKLMQEQRGRTTDEGDMERENINHI
AQTVDRQLGAMVDTLKSLVDQVNASASSNFASAGGGGAVGDSNARKIVRI
LNAHHHSLSWLEESSKKMLVDTSDVRRRIGLPCDAVLIPP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007758Nucleoporin_NSP1_C
IPR026010NSP1/NUP62