mRNA_F-serratus_M_contig1437.3124.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1437.3124.1 vs. uniprot
Match: D7FHR8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHR8_ECTSI) HSP 1 Score: 349 bits (895), Expect = 5.190e-112 Identity = 175/280 (62.50%), Postives = 222/280 (79.29%), Query Frame = 1
Query: 31 MSSHRQSQPQQAGVIVSGSADRFGTLVVRTGKNFVKNHPTISIAWVVGLLISILASGFTPSQEAVQNYEVKIADMDDQALAKSYDEFLFWQESYRRSRGWFWSCDDQCQHNKRMFEETQQAYTALEREYQRGVAEAKSELGLFSEDGVAETRELFWTKVAGGKRFAKRATVWDAMFVSIGSF-RRDEGLAAIIAKVAVRFILNLTIGLFMAVIQFLFSIWKVIWSYQPDPISTAAFFAMAALGAVSLLVAWFLGIAAVGVVGVYAVAKVAENAQIEAERR 867
MS HRQ PQ + IV G AD+FG LVV K VK HP IS++WVVGLL+S LASG+TPS A+QNYE K+ +DD+++ ++ E ++W + YRRS+G FW+C++QC N++ FE ++ Y L + Y +G A+AKSELG+FSEDGV ETR+LFW KV+GGK+FAKRAT+WDAMFV IG+ RRDEGLA+I+A++A RF++NLT+GLFMAV QFLFS+W VIWSYQPDP+ST AF AMAALGAVS+L W LG+AAVGV GVY VAK+AE AQIEA R+
Sbjct: 1 MSRHRQQMPQTS--IVVGGADQFGALVVSNAKQLVKRHPVISVSWVVGLLVSTLASGYTPSTTAMQNYENKMIGLDDESVMRAQGEMVYWDDIYRRSKGMFWTCNEQCTANRKEFERRRKTYLDLNKAYLKGEADAKSELGIFSEDGVEETRDLFWRKVSGGKQFAKRATMWDAMFVGIGTMTRRDEGLASIVARIAFRFVVNLTMGLFMAVFQFLFSMWTVIWSYQPDPLSTLAFAAMAALGAVSMLATWLLGLAAVGVTGVYTVAKLAETAQIEAARQ 278
BLAST of mRNA_F-serratus_M_contig1437.3124.1 vs. uniprot
Match: A0A835Z0D4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0D4_9STRA) HSP 1 Score: 198 bits (503), Expect = 2.430e-54 Identity = 106/267 (39.70%), Postives = 161/267 (60.30%), Query Frame = 1
Query: 46 QSQPQQAGVIVSGSADRFGTLVVRTGKNFVKNHPTISIAWVVGLLISILASGFTPSQEAVQNYEVKIADMD--DQALAKSYDEFLFWQESYRRSRGWFWSCDDQCQHNKRMFEETQQAYTALEREYQRGVAEAKSELGLFSEDGVAETRELFWTKVAGGKRFAKRATVWDAMFVSIGSFRRDEGLAAIIAKVAVRFILNLTIGLFMAVIQFLFSIWKVIWSYQPDPISTAAFFAMAALGAVSLLVAWFLGIAAVG---VVGVYAVAK 831
Q Q G + D T V + HP IS++WV GL ++I+A+GFTP+ +A++ Y + D+ + L ++ E+ W Y S+GWFW CDD CQ N + F + ++ +R Y +AEAKS LG+FS GVAE R+LFW +VAGG+ FA+R+T++DA+F IGS RRD +A + +AV+ + N++IG A++ FL+S+W VI ++QP + FF A+L A S++ +FLG+ A G VVG+ +AK
Sbjct: 2 QPPNQNNGAVAVRLNDLTLTTVAKGAAGVAVRHPVISLSWVAGLFLAIMATGFTPAPQAMEAYSFAVEDLKFYENELLQAQYEYDSWNVEYHESKGWFWQCDDHCQENYKSFVQAREDLRGKQRSYDGKLAEAKSHLGIFSTLGVAEARDLFWRRVAGGREFARRSTLYDAIFAGIGSMRRDSSMAEYVMTMAVQVLWNMSIGAVGALVTFLWSVWGVIATFQPSAVVALLFFMCASLAAGSVIATFFLGLGAAGAGAVVGMVQLAK 268
BLAST of mRNA_F-serratus_M_contig1437.3124.1 vs. uniprot
Match: A0A7S2WRM9_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WRM9_9STRA) HSP 1 Score: 171 bits (434), Expect = 1.180e-44 Identity = 98/262 (37.40%), Postives = 156/262 (59.54%), Query Frame = 1
Query: 85 SADRFGTLVVRTGKNFVKNHPTISIAWVVGLLISILASGFTPSQEAVQNYEVKIADMDDQALAKSYDEFLFWQESYRRSRGWFWSCDDQCQHNKRMFEETQQAYTALEREYQRGVAEAKSELGLFSEDGVAETRELFWTKVAGGKRFAKRATVWDAMFVSIGSFRRDEGLAAIIAKVAVRFILNLTIGLFMAVIQFLFSIWKVIWSYQPDPISTAAFFAMAALGAVSLLVAWFLGIAAVGVVGVYAVAKVAEN-AQIEAERR 867
S D T ++R G F K H ++ A++VG++I + A GF S E Q YE ++ +D + + ++ + +YR S+GWF SCD+ C N ++ +E+E+ +EAKS +G+FSE GV E R+LFW++ AGGK FAKR++ WD +F+SIGS RDE L + + ++N TIGL A+I F + +W +I SYQP + FF +A++ A S +V++ LG+ + VY AK+A N A+++ ++R
Sbjct: 16 SVDDVSTALIRHGVAFAKRHYVMTSAYIVGVVIMLFAGGFAVSMEQEQKYERILSQIDLKRMHRAQVAAQNAEYNYRESKGWF-SCDNHCMANYEEYQLNLARLAEVEKEFAEIQSEAKSVVGVFSEYGVQEVRDLFWSQFAGGKDFAKRSSWWDLIFMSIGSMGRDESLMEFALRFLMNMLMNFTIGLVGALIGFYWFVWGIITSYQPSVLIAFVFFMLASIAATSCVVSFLLGLYSAAAGSVYVAAKIASNSARLQDQQR 276
BLAST of mRNA_F-serratus_M_contig1437.3124.1 vs. uniprot
Match: A0A1Z5KJS4_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KJS4_FISSO) HSP 1 Score: 167 bits (424), Expect = 3.180e-43 Identity = 98/272 (36.03%), Postives = 153/272 (56.25%), Query Frame = 1
Query: 43 RQSQPQQAGVIVSGSADRFGTLVVRTGKNFVKNHPTISIAWVVGLLISILASGFTPSQEAVQNYEVK--IADMDDQALAKSYDEFLFWQESYRRSRGWFWSCDDQCQHNKRMFEETQQAYTALEREYQRGVAEAKSELGLFSEDGVAETRELFWTKVAGGKRFAKRATVWDAMFVSIGSFRR--DEGLAAIIAKVAVRFILNLTIGLFMAVIQFLFSIWKVIWSYQPDPISTAAFFAMAALGAVSLLVAWFLGIAAVGVVGVYAVAKVAENA 846
RQ +PQQ +I + D+ GTL++R F++ +P +S + +G+L+ I+ G Q+YE + +D QA ++ D++ +Y+ SRGW W CD C N + +E ++ +++E A+AK+ GL SE G+ E ++ FW GKRFAKR T+WD MF+ I S R DE KV ++ +LNL++GL MA+I F+ +W ++ SYQP+P+ FF A+ A S +V + L + GVY + KVAENA
Sbjct: 3 RQQRPQQQ-IIALPNPDQMGTLILRGSVAFIRRNPVVSGTYFLGILLLIIFGGGGRPLTPEQHYEYHRILQTVDLQAEYRATDDYWRAYHAYQASRGWLWGCDAVCTRNYQRMKEAERIMHLIQQEGAARTADAKNAAGLLSEIGIGEVQDSFWGYFHAGKRFAKRQTMWDMMFMGIRSMSRGRDESWMEFAVKVLLQVLLNLSMGLVMALIFFVMGLWTIVRSYQPNPLVAVLFFCGGAIAAFSFVVTYLLAVYGAAAGGVYTILKVAENA 273
BLAST of mRNA_F-serratus_M_contig1437.3124.1 vs. uniprot
Match: A0A7S2A693_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A693_TRICV) HSP 1 Score: 165 bits (418), Expect = 1.750e-42 Identity = 102/269 (37.92%), Postives = 152/269 (56.51%), Query Frame = 1
Query: 67 GVIVSGSADRFGTLVVRTGKNFVKNHPTISIAWVVGLLISILA-SGFTPSQEAVQNYEVKIADMDDQALAKSYDEFLFWQESYRRSRGWFWSCDDQCQHNKRMFEETQQAYTALEREYQRGVAEAKSELGLFSEDGVAETRELFWTKVAGGKRFAKRATVWDAMFVSIGSFRRDEGLAAIIAKVAVRFILNLTIGLFMAVIQFLFSIWKVIWSYQPDPISTAAFFAMAALGAVSLLVAWFLGIAAVGVVGVYAVAKVAE-NAQIEAERR 867
G + G D GTL +R F K H IS ++V GLL+ +L SG + + + Y+ ++ +D A + + + +YR S+GWF SCD CQ NK E+ + A + E +++AK GLFSE GV E ++ FW + GKRFAKR ++WDAMF+ + S RDE A K+ V+ ++N +IGL MA+ F+F +W ++ SYQPDP++ AFF A A + + + L I G+Y +AK+AE N +IE RR
Sbjct: 9 GQLARGQGD-IGTLALRGAAAFAKRHKVISGSYVFGLLVLLLVGSGTKLTLDQRRQYDHIMSTIDLNAEFDASNRYAHAMHAYRASKGWF-SCDSLCQRNKARMEDARAALEDIRAEGYNRMSDAKRVAGLFSEVGVGEVKDSFWERFHAGKRFAKRQSMWDAMFMGMRSMGRDESFAEYALKMIVQVLINFSIGLVMALFIFIFGLWGIVRSYQPDPLTALAFFLSAVCAAFAFVTTYLLLIYGATAGGLYGMAKMAETNMRIEQGRR 275
BLAST of mRNA_F-serratus_M_contig1437.3124.1 vs. uniprot
Match: A0A1E7FAB6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FAB6_9STRA) HSP 1 Score: 165 bits (417), Expect = 3.600e-42 Identity = 99/273 (36.26%), Postives = 156/273 (57.14%), Query Frame = 1
Query: 55 PQQAG--VIVSGSADRFGTLVVRTGKNFVKNHPTISIAWVVGLLISILASGFTP-SQEAVQNYEVKIADMDDQALAKSYDEFLFWQESYRRSRGWFWSCDDQCQHNKRMFEETQQAYTALEREYQRGVAEAKSELGLFSEDGVAETRELFWTKVAGGKRFAKRATVWDAMFVSIGSFRRDEGLAAIIAKVAVRFILNLTIGLFMAVIQFLFSIWKVIWSYQPDPISTAAFFAMAALGAVSLLVAWFLGIAAVGVVGVYAVAKVAE-NAQIEAE 861
P QAG VIV G +++R +F K H I+ +V+G+L+ IL G + + + + Y + +D +A + ++F ++YR ++GWF SCD CQ NKR ++ + + E +++AK+ GLFSE GV E ++ FW+ + GK+FAKR ++WDAMF+ I S RDE + KV ++ +LN +IGL MA++ F+ +W ++ SYQP+PI AFF A+ A S + + I GVY V K+AE N QI+ +
Sbjct: 12 PGQAGRQVIVLPEPADVGKIIIRGASDFAKQHKVITGGYVLGILVIILIGGGSKLNYDQRREYNNIMNTIDVEAEYAASNDFFAANQNYRATKGWF-SCDGLCQRNKRKMDDAKIRLDRIREEGNVRMSDAKNVAGLFSEIGVGEVQDAFWSYFSAGKKFAKRQSMWDAMFMGIRSMGRDENMVEYGMKVLMQVLLNFSIGLVMALVMFVVGLWSIVRSYQPNPIVAVAFFVSASCAAFSFVTTYLFAIYGAAAGGVYGVLKIAEGNLQIQQQ 283
BLAST of mRNA_F-serratus_M_contig1437.3124.1 vs. uniprot
Match: A0A7S2WBN5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WBN5_9STRA) HSP 1 Score: 165 bits (417), Expect = 5.060e-42 Identity = 92/247 (37.25%), Postives = 150/247 (60.73%), Query Frame = 1
Query: 136 KNHPTISIAWVVGLLISILASGFTPSQEAVQNYEVKIADMDDQALAKSYDEFLFWQESYRRSRGWFWSCDDQCQ-HNKRMFEETQQAYTALEREYQRGVAEAKSELGLFSEDGVAETRELFWTKVAGGKRFAKRATVWDAMFVSIGSFRRDEGLAAIIAKVAVRFILNLTIGLFMAVIQFLFSIWKVIWSYQPDPISTAAFFAMAALGAVSLLVAWFLGI--AAVGVVGVYAVAKVAENAQIEAERR 867
K H ++ ++++GLL+ +GF ++E Y+ + +D+ L +++ F Q+ YR S+GWFW+CD +CQ H +R + + +ALE+E +R V +AK ++GLFSE GV ETR++FW AGG+++ +R ++WD +F + RDE L ++ + + N TIG+ MA+I FLF +W VI SYQPDP++ F+A AA+ AVS + + L I A G + V A V N ++ ++R
Sbjct: 47 KKHKAVTGSYLLGLLLLAFGTGFRVAEETQAAYQATLDTVDEAGLQHAHESFYAAQDRYRSSQGWFWTCDQKCQVHKQRYLDAKARLDSALEQE-RRVVRDAKKQVGLFSEYGVQETRDVFWQYFAGGRQWGQRQSMWDLLFAGF-RWGRDEELFTVVCRWLLELAFNFTIGMVMALIMFLFGVWSVISSYQPDPVTGLVFYAAAAITAVSCVATYLLCIYGATAGSIAVVAKVAVDHNRRLGQDQR 291
BLAST of mRNA_F-serratus_M_contig1437.3124.1 vs. uniprot
Match: A0A7S0C9V1_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C9V1_9STRA) HSP 1 Score: 162 bits (411), Expect = 2.450e-41 Identity = 96/282 (34.04%), Postives = 160/282 (56.74%), Query Frame = 1
Query: 49 SQPQQAG------VIVSGSADRFGTLVVRTGKNFVKNHPTISIAWVVGLLISILA-SGFTPSQEAVQNYEVKIADMDDQALAKSYDEFLFWQESYRRSRGWFWSCDDQCQHNKRMFEETQQAYTALEREYQRGVAEAKSELGLFSEDGVAETRELFWTKVAGGKRFAKRATVWDAMFVSIGSFRRDEGLAAIIAKVAVRFILNLTIGLFMAVIQFLFSIWKVIWSYQPDPISTAAFFAMAALGAVSLLVAWFLGIAAVGVVGVYAVAKVAE-NAQIEAERRG 870
+QPQ G +++ S+D FG L V K F K + I+ +++ GL+I +L SG+ S+E Y ++ +D +A + +++ ++YR ++GWF+SCD CQ NK E ++ + E +++AK+ G+FSE GV E ++ FW GK+FAKR T+WDA+F + S RDE + + KV + ++N ++GL MA+ F+F +W ++ SYQPDP++ AFF A+ A + + + + VY VAK+AE N +I+ + G
Sbjct: 8 NQPQNRGAMDGQRIVIPNSSD-FGALAVSGVKAFAKRNKVITGSYLFGLIIVVLGGSGYQLSREQSIQYNQIMSTIDLKAEYDASNKYASANQAYRATKGWFFSCDSLCQRNKSRMEHAKRDLGMIRAEGYNRMSDAKASAGIFSEVGVGEVKDSFWEYFQSGKQFAKRQTMWDALFTGMRSMGRDESMMEYVLKVLMNALINFSLGLIMALFIFIFGLWSIVKSYQPDPLTAVAFFLSASCAAFAFVSTFLFFMYGAAAGSVYGVAKLAEANMRIDNGQGG 288
BLAST of mRNA_F-serratus_M_contig1437.3124.1 vs. uniprot
Match: A0A2R5GIG8_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GIG8_9STRA) HSP 1 Score: 160 bits (406), Expect = 1.200e-40 Identity = 89/263 (33.84%), Postives = 149/263 (56.65%), Query Frame = 1
Query: 82 GSADRFGTLVVRTGKNFVKNHPTISIAWVVGLLISILASGFTPSQEAVQNYEVKIADMDDQALAKSYDEFLFWQESYRRSRGWFWSCDDQCQHNKRMFEETQQAYTALEREYQRGVAEAKSELGLFSEDGVAETRELFWTKVAGGKRFAKRATVWDAMFVSIGSFRRDEGLAAIIAKVAVRFILNLTIGLFMAVIQFLFSIWKVIWSYQPDPISTAAFFAMAALGAVSLLVAWFLGIAAVGVVGVYAVAKVA-ENAQIEAERR 867
G F +++ G F K + + W+ GL++ + A+GF S + Q Y ++ +D + L + + WQ Y +S+GWF SCD+ C N Q ++E+E+ +EAK +G+FSE GV E RELFW++ AGG+ FA+R++ +D +F+SI S RDE L ++ V +LN TIGL A++ F + +W V+ +YQP + FF +A++ A SL+ A+ G+ + V+ AK+A ++A++ + R
Sbjct: 26 GDIPDFSMIMINGGVRFAKRNKVTTGMWIFGLVLVLFATGFQVSHQEEQTYNRILSKIDYKRLDAAQQQVYVWQHKYAQSKGWF-SCDEACHENYENLRAAQDNLYSIEKEFASISSEAKQTVGIFSEYGVQEVRELFWSQFAGGREFAQRSSWYDFIFMSISSMGRDESLVEFGLRLIVNMLLNFTIGLIGALVGFYYYLWGVVAAYQPSFLLAVGFFFLASVAATSLVAAYLAGLYSAAAGTVFVAAKIATQSARLNDDAR 287
BLAST of mRNA_F-serratus_M_contig1437.3124.1 vs. uniprot
Match: A0A6U0UXC3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0UXC3_9STRA) HSP 1 Score: 157 bits (398), Expect = 1.210e-39 Identity = 100/248 (40.32%), Postives = 141/248 (56.85%), Query Frame = 1
Query: 97 FGTLVVRTGKNFVKNHPTISIAWVVGLLISILASGFTPSQEAVQNYEVKIADMDDQALAKSYDEFLFWQESYRRSRGWFWSCDDQCQHNKRMFEETQQAYTALEREYQRGVAEAKSELGLFSEDGVAETRELFWTKVAGGKRFAKRATVWDAMFVSIG-SFRRDEGLAAIIAKVAVRFILNLTIGLFMAVIQFLFSIWKVIWSYQPDPISTAAFFAMAALGAVSLLVAWFLGI--AAVG-VVGVYAVA 828
G +VVR F K + W +GL I+ SGF+ S + Y + +D +L F E+YR ++GWF SC+++CQH + E Q A + +++ + V EA LGLFS D V E R+LFW AGGKRFAKRAT WD +F+ +G + RDE L + +V NLT+GL A+I FLFS+ +++Y PDP+S FF +AAL A S++ + L + AAVG VVG +VA
Sbjct: 16 LGQVVVRATVAFAKRNYVAMGLWALGLFITAFGSGFSVSGQQRAEYARIMNSVDSASLQDLEMAFFQADENYRYNKGWF-SCNEECQHWQTKREHAQMALNSEQKKVESQVREAHRALGLFSTDTVGEARDLFWGAFAGGKRFAKRATYWDVIFMGVGMAMGRDESLPEFLLRVXXXXXXNLTVGLIFALITFLFSLASFLYTYAPDPLSALTFFGLAALAAASVVATYLLVVYVAAVGTVVGAASVA 262 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1437.3124.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1437.3124.1 >prot_F-serratus_M_contig1437.3124.1 ID=prot_F-serratus_M_contig1437.3124.1|Name=mRNA_F-serratus_M_contig1437.3124.1|organism=Fucus serratus male|type=polypeptide|length=331bp MSSHRQSQPQQAGVIVSGSADRFGTLVVRTGKNFVKNHPTISIAWVVGLLback to top mRNA from alignment at F-serratus_M_contig1437:113144..120101- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1437.3124.1 ID=mRNA_F-serratus_M_contig1437.3124.1|Name=mRNA_F-serratus_M_contig1437.3124.1|organism=Fucus serratus male|type=mRNA|length=6958bp|location=Sequence derived from alignment at F-serratus_M_contig1437:113144..120101- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1437:113144..120101- >mRNA_F-serratus_M_contig1437.3124.1 ID=mRNA_F-serratus_M_contig1437.3124.1|Name=mRNA_F-serratus_M_contig1437.3124.1|organism=Fucus serratus male|type=CDS|length=1986bp|location=Sequence derived from alignment at F-serratus_M_contig1437:113144..120101- (Fucus serratus male)back to top |