mRNA_F-serratus_M_contig1430.3089.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1430.3089.1 vs. uniprot
Match: D7G939_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G939_ECTSI) HSP 1 Score: 337 bits (865), Expect = 8.700e-109 Identity = 163/248 (65.73%), Postives = 202/248 (81.45%), Query Frame = 2
Query: 14 SISCEEVSTALPPQDALLVNIKPVGLVSLLLTPGYPYSNNQRATSYALAVAMDYAEALRSEPGFRLGFNSGGSSASVNHLHFQCWYFDASETGGLPIETSETLYVGSLALPSGH---RADADETA--RDMMDVYTLQGYPLRGLVFHTLGKDLEAVGDVIEKCVNFLLGVNTPHTMLFSTGRVFLLPRQHLQEPPFAVVPGFPEVSGQIIVTSEGDYAKLTADDIYNFWHEKIAVDARDFDRIVDACM 742
++ C E STA PPQDA+LVNI+PVG VSLLLTPGY +S+NQRAT+Y+LAVA+D+AEALR +PGFRLGFNS GSSASVNHLHFQCWYFDA GGL IE+S+T ++ ++ LP A+ + A D ++V+ LQGYP+R LVFHTLGKDLEA G+ IEKCV+FL+ NTPHT++FSTGRVF+LPRQHL+EPPFAVVPGFPEVSG++IVT E D+ +TAD IY +W +K+AVD+ FDRI D C+
Sbjct: 307 AVGCGEASTASPPQDAVLVNIRPVGPVSLLLTPGYAHSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQCWYFDAGP-GGLAIESSKTRHLATVPLPRSSFSPPAEGENAADKEDSLEVHVLQGYPIRALVFHTLGKDLEAAGEAIEKCVSFLVEENTPHTVVFSTGRVFVLPRQHLEEPPFAVVPGFPEVSGEVIVTREDDFHTITADQIYEWWRDKVAVDSEHFDRITDGCL 553
BLAST of mRNA_F-serratus_M_contig1430.3089.1 vs. uniprot
Match: A0A6H5JG89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG89_9PHAE) HSP 1 Score: 330 bits (846), Expect = 7.020e-105 Identity = 163/252 (64.68%), Postives = 202/252 (80.16%), Query Frame = 2
Query: 14 SISCEEVSTALPPQDALLVNIKPVGLVSLLLTPGYPYSNNQRATSYALAVAMDYAEALRSEPGFRLGFNSGGSSASVNHLHFQ---CWYFDASETGGLPIETSETLYVGSLAL------PSGHRADADETARDMMDVYTLQGYPLRGLVFHTLGKDLEAVGDVIEKCVNFLLGVNTPHTMLFSTGRVFLLPRQHLQEPPFAVVPGFPEVSGQIIVTSEGDYAKLTADDIYNFWHEKIAVDARDFDRIVDACM 742
++ C E STA PPQDA+LVNI+PVG VSLLLTPGYP+S+NQRAT+Y+LAVA+D+AEALR +PGFRLGFNS GSSASVNHLHFQ CWYFDA G L IE+S+T ++ ++ L PS +A + D ++V+ LQGYP+R LVFHTLGKDLEA G+ IEKCV+FL+ NTPHT++FSTGRVF+LPRQHL+EPPFAVVPGFPEVSG++IVT E D+ +TAD IY +W +K+AVD+ FDRI D C+
Sbjct: 393 AVGCGEASTASPPQDAVLVNIRPVGPVSLLLTPGYPHSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQAAGCWYFDAGPRG-LAIESSKTRHLATVPLSRASFSPSAKGENAADK-EDSLEVHVLQGYPIRALVFHTLGKDLEAAGEAIEKCVSFLVEENTPHTVVFSTGRVFVLPRQHLEEPPFAVVPGFPEVSGEVIVTREDDFHTITADQIYEWWRDKVAVDSEHFDRITDGCL 642
BLAST of mRNA_F-serratus_M_contig1430.3089.1 vs. uniprot
Match: X6NVT4_RETFI (Uncharacterized protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6NVT4_RETFI) HSP 1 Score: 91.7 bits (226), Expect = 1.190e-16 Identity = 78/254 (30.71%), Postives = 115/254 (45.28%), Query Frame = 2
Query: 8 VSSISCEEVSTALPPQDALLVNIKPVGLVSLLLTPGYPYSNNQRATSYALAVAMDYAEALRSEPG---FRLGFNSGGSSASVNHLHFQCWYFDASETGGLPIETSETLYVGSLALPSGHRADADETARDMMDVYTLQG--YPLRGLVFH--TLGKDLEAVGDVIEKCVNFLLGVNTPHTMLFSTGRVFLLPRQHLQ-EPPFAVVPGFPEVSGQIIVTSEGDYAKL-TADDIYNFWHEKIAVDARDFDRIVDACM 742
V SI C+ A LLVN P+G S L TP + Q T L V + + S+ FR+GFNS G+ ASVNH HFQ W D TG LP+ET H+ + + ++T YP+R L++ T + LE + CV FL+ + PH ++ S V+L R Q + + GF +VSG I V +E + L T + +Y ++I+V +D + C+
Sbjct: 323 VDSIQCDPFVFAKTDTHLLLVNRFPIGNYSGLFTPYFWQKLPQVLTKELLHVGLQFNAMFLSQSHKGTFRVGFNSLGAMASVNHFHFQFWKID---TGLLPVETL-------------HKTPIPTANKQHLQIFTFNDNVYPIRTLIYPIVTGNRTLET----LWHCVKFLIESDIPHNLMISRQFVYLFVRNEQQLTSNYPIFYGFSDVSGWITVLNEQMFDHLLTFEMLYQDMQQRISVQPSKWDFVYSNCV 556
BLAST of mRNA_F-serratus_M_contig1430.3089.1 vs. uniprot
Match: A0A1B6Q7Q1_SORBI (Uncharacterized protein n=9 Tax=Andropogoneae TaxID=147429 RepID=A0A1B6Q7Q1_SORBI) HSP 1 Score: 88.2 bits (217), Expect = 8.710e-16 Identity = 66/220 (30.00%), Postives = 102/220 (46.36%), Query Frame = 2
Query: 59 ALLVNIKPVGLVSLLLTPGYPYSNNQRATSYALAVAMDYAEALRSEPGFRLGFNSGGSSASVNHLHFQCWYFDASETGGLPIETSETLYVGSLALPSGHRADADETARDMMDVYTLQGYPLRGLVFHTLGKDLEAVGDVIEKCVNFLLGVNTPHTMLFSTG--RVFLLPRQHLQEP----------PFAVVPGFPEVSGQIIVTSEGDYAKLTADDIYNF 682
A+L+N+ P+G LLTP QR + +AM A R+ P FR+G+NS G A++NHLHFQ +Y P+E + T + SL + + ++ L YP+ G +F G LE + DV+ K FL N P +L S RVFLLP+ + ++ + P E+SG +++ DY + + +I F
Sbjct: 164 AILINVSPIGYCHALLTPKIQDCLPQRIDQESFLIAMYVAREARN-PFFRVGYNSLGGFATINHLHFQAYYLRVQ----YPVEKATTEKLTSLG--------------NGVSIFHLLDYPVSGFLFKG-GASLEDLSDVVSKVCIFLQENNRPFNVLISESGKRVFLLPQCYAEKQILGKASQEFLDMRINPAIWELSGHLVLKRRKDYDEASEANICRF 363
BLAST of mRNA_F-serratus_M_contig1430.3089.1 vs. uniprot
Match: A0A2T7DD07_9POAL (Uncharacterized protein n=8 Tax=Paniceae TaxID=147428 RepID=A0A2T7DD07_9POAL) HSP 1 Score: 86.7 bits (213), Expect = 3.230e-15 Identity = 71/248 (28.63%), Postives = 110/248 (44.35%), Query Frame = 2
Query: 59 ALLVNIKPVGLVSLLLTPGYPYSNNQRATSYALAVAMDYAEALRSEPGFRLGFNSGGSSASVNHLHFQCWYFDASETGGLPIETSETLYVGSLALPSGHRADADETARDMMDVYTLQGYPLRGLVFHTLGKDLEAVGDVIEKCVNFLLGVNTPHTMLFSTG--RVFLLPRQHLQEPPFA----------VVPGFPEVSGQIIVTSEGDYAKLTADDIYNFWHEKIAVDAR---------DFDRIVDAC 739
A+L+N+ P+G +LLTP QR + +AM A R+ P FR+G+NS G A++NHLHFQ +Y P+E + T + +L + + + L YP+ G VF G LE + DV+ K FL N P +L S VFLLP+ + ++ + P E+SG +++ + DY + + +I F E + DF + DAC
Sbjct: 169 AILINVSPIGYCHVLLTPKIQDCLPQRIDEESFLIAMYIAREARN-PFFRVGYNSLGGFATINHLHFQAYYLKVP----YPVEKATTEKLTTLV--------------NGVSISQLVDYPVSGFVFEG-GASLEDLSDVVAKVCIFLQENNRPFNVLISESGNSVFLLPQCYAEKQRLGKASQEFLDMRINPAIWELSGHLVLKRKKDYDEASEPNICRFLVEAALSETEFQELKRCVLDFLTVSDAC 396
BLAST of mRNA_F-serratus_M_contig1430.3089.1 vs. uniprot
Match: A0A7I8KHT5_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KHT5_SPIIN) HSP 1 Score: 86.3 bits (212), Expect = 5.360e-15 Identity = 67/224 (29.91%), Postives = 105/224 (46.88%), Query Frame = 2
Query: 32 VSTALPPQDALLVNIKPVGLVSLLLTPGYPYSNNQRATSYALAVAMDYAEALRSEPGFRLGFNSGGSSASVNHLHFQCWYFDASETGGLPIETSETLYVGSLALPSGHRADADETARDMMDVYTLQGYPLRGLVFHTLGKDLEAVGDVIEKCVNFLLGVNTPHTMLFSTG--RVFLLPRQHLQEPPFAVV----------PGFPEVSGQIIVTSEGDYAKLTAD 667
V T PP + + +N+ P+ +LL P Q+ S + +A+ A A P FRLG+NS G+ A++NHLHFQ +Y P+E + T + R T + + V +L YP+RGLVF G DL+A+ D++ FL NTP +L S R+F+ P+ + ++ V P E+SG +++ DY + D
Sbjct: 166 VGTTSPP-NVVAINVSPIEYGHVLLIPRVLECLPQKIDSESFFLAVKMA-AEAGSPYFRLGYNSLGAFATINHLHFQAYYLSVP----FPVEKAPTKKIA--------RTKGGPT-KGGVQVSSLMSYPVRGLVFEG-GSDLQALSDLVSNVCVFLQENNTPFNVLISDSGKRIFVFPQCYAEKQALGEVSQELLETQVNPAAWEISGHMVLKRRKDYDDASED 373
BLAST of mRNA_F-serratus_M_contig1430.3089.1 vs. uniprot
Match: A0A843VDM2_COLES (Uncharacterized protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843VDM2_COLES) HSP 1 Score: 85.9 bits (211), Expect = 6.890e-15 Identity = 66/225 (29.33%), Postives = 107/225 (47.56%), Query Frame = 2
Query: 32 VSTALPPQDALLVNIKPVGLVSLLLTPGYPYSNNQRATSYALAVAMDYAEALRSEPGFRLGFNSGGSSASVNHLHFQCWYFDASETGGLPIETSETLYVGSLALPSGHRADADETARDMMDVYTLQGYPLRGLVFHTLGKDLEAVGDVIEKCVNFLLGVNTPHTMLFSTG--RVFLLPRQHLQEPPFAVV----------PGFPEVSGQIIVTSEGDYAKLTADD 670
V T+ P + +N+ P+ ++L P QR +L +A+ A+ S P FRLG+NS G+ A++NHLHFQ +Y G+P+ + +AL +G ++V+ L YP+RGLVF L LE + V+ FL N P+ +L S RVFL P+ + ++ V P E+SG +++ + DY + + +D
Sbjct: 152 VETSQRPHGMVAINVSPIEYGHVVLIPRTLDCLPQRIDCESLLLALHMADEAAS-PYFRLGYNSLGAFATINHLHFQAYYL------GMPLAVEKAQTRRIMALSNG------------VNVFQLLEYPVRGLVFEGLST-LEDLSIVVSDACIFLQENNIPYNILISDSGKRVFLFPQCYAEKQALGEVSQELLDTQVNPAVWEISGHMVLKRKKDYEEASEED 356
BLAST of mRNA_F-serratus_M_contig1430.3089.1 vs. uniprot
Match: A0A3S4PXI4_9MAGN (GDP-L-galactose phosphorylase 2-like protein n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S4PXI4_9MAGN) HSP 1 Score: 85.9 bits (211), Expect = 7.060e-15 Identity = 61/220 (27.73%), Postives = 101/220 (45.91%), Query Frame = 2
Query: 68 VNIKPVGLVSLLLTPGYPYSNNQRATSYALAVAMDYAEALRSEPGFRLGFNSGGSSASVNHLHFQCWYFDASETGGLPIETSETLYVGSLALPSGHRADADETARDMMDVYTLQGYPLRGLVFHTLGKDLEAVGDVIEKCVNFLLGVNTPHTMLFSTG--RVFLLPRQHLQEPPFAVV----------PGFPEVSGQIIVTSEGDYAKLTADDIYNFWHE 691
+N+ P+ +LL P QR + +A+ Y A P FRLG+NS G+ A++NHLHFQ +Y P+E + T + S+ + + + +Y L YP+RGLVF G LE + DV+ L N P+ +L S R+F+ P+ + ++ V P E+SG +++ + DY + + D+ + E
Sbjct: 171 INVSPIEYAHVLLIPRILECLPQRIDRESFLLAL-YMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYLAVP----FPVEKAPTRKISSVK----------GLSENEVKIYELSNYPVRGLVFEG-GNTLEDLADVVSNACICLQNNNIPYNVLISDSGKRIFIFPQCYAEKQALGEVKQELLDTQVNPAVWEISGHMVLKRKKDYEEASDDNAWRLLAE 374
BLAST of mRNA_F-serratus_M_contig1430.3089.1 vs. uniprot
Match: A0A5J9VIH9_9POAL (Uncharacterized protein n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9VIH9_9POAL) HSP 1 Score: 85.5 bits (210), Expect = 7.650e-15 Identity = 66/220 (30.00%), Postives = 102/220 (46.36%), Query Frame = 2
Query: 59 ALLVNIKPVGLVSLLLTPGYPYSNNQRATSYALAVAMDYAEALRSEPGFRLGFNSGGSSASVNHLHFQCWYFDASETGGLPIETSETLYVGSLALPSGHRADADETARDMMDVYTLQGYPLRGLVFHTLGKDLEAVGDVIEKCVNFLLGVNTPHTMLFST--GRVFLLPRQHLQEP----------PFAVVPGFPEVSGQIIVTSEGDYAKLTADDIYNF 682
A+L+N+ P+G +LL P QR + +AM A ++P FR+G+NS G A++NHLHFQ +Y P+E + T + +L+ + + V L YP+ G F G LEA+ DV+ K FL N P +L S RVFLLP+ + ++ + P E+SG +I+ DY + + I+ F
Sbjct: 162 AILINVSPIGYCHVLLIPRIQDCLPQRIDQESFLLAMHVAREA-TDPFFRVGYNSLGGFATINHLHFQAYYLKVQ----YPVEKASTEKLTTLS--------------NGVSVALLVQYPVCGFAFEG-GTCLEALSDVVSKICIFLQESNRPFNVLISECGKRVFLLPQCYAEKQLAGKASQEFLDMRINPAIWELSGHLILKRRKDYDEASEATIFRF 361
BLAST of mRNA_F-serratus_M_contig1430.3089.1 vs. uniprot
Match: A0A368REI1_SETIT (Uncharacterized protein n=4 Tax=Setaria TaxID=4554 RepID=A0A368REI1_SETIT) HSP 1 Score: 85.5 bits (210), Expect = 8.000e-15 Identity = 72/248 (29.03%), Postives = 113/248 (45.56%), Query Frame = 2
Query: 59 ALLVNIKPVGLVSLLLTPGYPYSNNQRATSYALAVAMDYAEALRSEPGFRLGFNSGGSSASVNHLHFQCWYFDASETGGLPIETSETLYVGSLALPSGHRADADETARDMMDVYTLQGYPLRGLVFHTLGKDLEAVGDVIEKCVNFLLGVNTPHTMLFSTG--RVFLLPRQHLQEP----------PFAVVPGFPEVSGQIIVTSEGDYAKLTADDIYNFWHEKIAVDARDFDRIVDACMT*TNESAA 766
A+L+N+ P+G +LLTP QR + +AM A R+ P FR+G+NS G A++NHLHFQ +Y P+E + T + +L + + + L GYP+ G VF G LE + ++ K FL N P +L S RVFLLP+ + ++ + P E+SG +++ + DY + + I F E AV +F ++ + SAA
Sbjct: 169 AILINVSPIGYCHVLLTPQIQDCLPQRIDHESFLMAMYVAREARN-PFFRVGYNSLGGFATINHLHFQAYYLKVQ----YPVEKATTEKLTTLV--------------NGVSIAQLVGYPVSGFVFEG-GASLEDLSCMVSKVCIFLQENNRPFNVLISESGRRVFLLPQCYAEKQLLGKASQEFLEMRINPAIWELSGHLVLKRKKDYDEASELYICRFLVEA-AVSETEFQQLKQCVLDFLTASAA 395 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1430.3089.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1430.3089.1 >prot_F-serratus_M_contig1430.3089.1 ID=prot_F-serratus_M_contig1430.3089.1|Name=mRNA_F-serratus_M_contig1430.3089.1|organism=Fucus serratus male|type=polypeptide|length=194bp MDYAEALRSEPGFRLGFNSGGSSASVNHLHFQCWYFDASETGGLPIETSEback to top mRNA from alignment at F-serratus_M_contig1430:98505..101176+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1430.3089.1 ID=mRNA_F-serratus_M_contig1430.3089.1|Name=mRNA_F-serratus_M_contig1430.3089.1|organism=Fucus serratus male|type=mRNA|length=2672bp|location=Sequence derived from alignment at F-serratus_M_contig1430:98505..101176+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1430:98505..101176+ >mRNA_F-serratus_M_contig1430.3089.1 ID=mRNA_F-serratus_M_contig1430.3089.1|Name=mRNA_F-serratus_M_contig1430.3089.1|organism=Fucus serratus male|type=CDS|length=1164bp|location=Sequence derived from alignment at F-serratus_M_contig1430:98505..101176+ (Fucus serratus male)back to top |