prot_F-serratus_M_contig143.3069.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig143.3069.1
Unique Nameprot_F-serratus_M_contig143.3069.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length99
Homology
BLAST of mRNA_F-serratus_M_contig143.3069.1 vs. uniprot
Match: A0A6H5JEW8_9PHAE (53EXOc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEW8_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 3.380e-44
Identity = 72/98 (73.47%), Postives = 85/98 (86.73%), Query Frame = 0
Query:    1 MCQLVGDRVHVMYRRSNGYGVLGAEEVQAKFGVKPASLPDLFGLAGDASDNIPGVRGIGPKSGSRLLERFGNLEGIFDGVDGVGSLGIRGSKGLQELL 98
            MCQLV DRVHVM  R +GY +LG++EV AKFGV+P++LPDLFGL GD +DNIPGV+GIGPK GSRLLE+F  LEG+F G+DGVGS+GIRGSKGLQ LL
Sbjct:  153 MCQLVRDRVHVMQPRRDGYTILGSDEVLAKFGVQPSALPDLFGLIGDVADNIPGVKGIGPKGGSRLLEKFETLEGVFAGLDGVGSMGIRGSKGLQTLL 250          
BLAST of mRNA_F-serratus_M_contig143.3069.1 vs. uniprot
Match: A0A523PTW5_9BACT (Exodeoxyribonuclease IX n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523PTW5_9BACT)

HSP 1 Score: 89.0 bits (219), Expect = 3.190e-19
Identity = 51/98 (52.04%), Postives = 64/98 (65.31%), Query Frame = 0
Query:    1 MCQLVGDRVHVMYRRSNGYGVLGAEEVQAKFGVKPASLPDLFGLAGDASDNIPGVRGIGPKSGSRLLERFGNLEGIFDGVDGVGSLGIRGSKGLQELL 98
            + QLV  RV  M+  S G     A  V+AKFGV P  +PD  GLAGDA DNIPGVRGIGPK+ + LL+ FG+L+ +F  +D V +L IRG+K L   L
Sbjct:  138 LAQLVDARV-TMFDYSKGVRY-DAAAVRAKFGVAPRQVPDFLGLAGDAVDNIPGVRGIGPKTAAVLLDAFGDLDALFRRLDEVAALPIRGAKTLGAKL 233          
BLAST of mRNA_F-serratus_M_contig143.3069.1 vs. uniprot
Match: A0A1Y1RZ43_9SPIO (DNA polymerase I n=1 Tax=Marispirochaeta aestuarii TaxID=1963862 RepID=A0A1Y1RZ43_9SPIO)

HSP 1 Score: 87.4 bits (215), Expect = 5.430e-18
Identity = 47/100 (47.00%), Postives = 60/100 (60.00%), Query Frame = 0
Query:    1 MCQLVGDRVHVMYR-RSNGYGVLGAEEVQAKFGVKPASLPDLFGLAGDASDNIPGVRGIGPKSGSRLLERFGNLEGIFDGVDGVGSLGIRGSKGLQELLR 99
            + QLVG  V  M   +S GY  +G EEV  KFGV P  + D   L GD SDN+PGV+GIGPK    L+ RFG+LEGI++ +D +       S G QE L+
Sbjct:  139 LMQLVGKSVSAMIPDKSGGYAEVGPEEVSEKFGVAPEQILDYLSLVGDQSDNVPGVKGIGPKGAVDLIRRFGSLEGIYENLDQL-------SPGQQEKLQ 231          
BLAST of mRNA_F-serratus_M_contig143.3069.1 vs. uniprot
Match: A0A518EZ41_9BACT (DNA polymerase I n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518EZ41_9BACT)

HSP 1 Score: 85.5 bits (210), Expect = 8.290e-18
Identity = 48/98 (48.98%), Postives = 63/98 (64.29%), Query Frame = 0
Query:    1 MCQLVGDRVHVMYRRSNGYGVLGAEEVQAKFGVKPASLPDLFGLAGDASDNIPGVRGIGPKSGSRLLERFGNLEGIFDGVDGVGSLGIRGSKGLQELL 98
            + QLV DR    Y  + G   LG  EV+AKFGV P  + DL GLAGD+ D+IPGVRG+GPK+ + LLE F NLE I++ +  V  + +RG+K L   L
Sbjct:  153 LTQLVDDRTS-FYDFAKG-ARLGPAEVRAKFGVHPHQIRDLLGLAGDSVDDIPGVRGVGPKTATALLEHFENLEAIYEDLGRVKEVPLRGAKTLGAKL 248          
BLAST of mRNA_F-serratus_M_contig143.3069.1 vs. uniprot
Match: A0A7C4S2F5_9BACT (Flap endonuclease n=1 Tax=Lentisphaerae bacterium TaxID=1932692 RepID=A0A7C4S2F5_9BACT)

HSP 1 Score: 85.1 bits (209), Expect = 8.910e-18
Identity = 47/87 (54.02%), Postives = 58/87 (66.67%), Query Frame = 0
Query:    3 QLVGDRVHVMYRRSNGYGVLGAEEVQAKFGVKPASLPDLFGLAGDASDNIPGVRGIGPKSGSRLLERFGNLEGIFDGVDGVGSLGIR 89
            QLVG+RV V+     G   LG EEV+AK GV PA + D   LAGDASDNIPGV GIGPK+ ++LL  FG+ E +   V+ +GS  IR
Sbjct:  141 QLVGERVRVIPVAGPGTA-LGPEEVRAKTGVAPAQIVDWLALAGDASDNIPGVPGIGPKTAAKLLNEFGSAEELLRRVEEIGSEKIR 226          
BLAST of mRNA_F-serratus_M_contig143.3069.1 vs. uniprot
Match: A0A7V4PPR6_9DELT (53EXOc domain-containing protein (Fragment) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V4PPR6_9DELT)

HSP 1 Score: 84.0 bits (206), Expect = 1.870e-17
Identity = 41/98 (41.84%), Postives = 67/98 (68.37%), Query Frame = 0
Query:    1 MCQLVGDRVHVMYRRSNGYGVLGAEEVQAKFGVKPASLPDLFGLAGDASDNIPGVRGIGPKSGSRLLERFGNLEGIFDGVDGVGSLGIRGSKGLQELL 98
            + QLVGD + ++    + +  +G +EV+ KFGV+P  + ++ GL GDASDNIPGV+GIG KS S L++RF  LE +F+ +D +   G++G + +++ L
Sbjct:  150 LMQLVGDGIRLLDTAKDKW--IGPDEVREKFGVEPDKVIEVIGLMGDASDNIPGVKGIGEKSASGLIQRFRTLEYLFEHLDDLKQTGLKGVERVRKAL 245          
BLAST of mRNA_F-serratus_M_contig143.3069.1 vs. uniprot
Match: A0A1V5VHJ4_9BACT (DNA polymerase I n=1 Tax=bacterium ADurb.Bin236 TaxID=1866925 RepID=A0A1V5VHJ4_9BACT)

HSP 1 Score: 85.9 bits (211), Expect = 1.890e-17
Identity = 47/105 (44.76%), Postives = 65/105 (61.90%), Query Frame = 0
Query:    1 MCQLVGDRVHVMY--RRSNGYGVLGAEEVQAKFGVKPASLPDLFGLAGDASDNIPGVRGIGPKSGSRLLERFGNLEGIFDGVDGVGSLGIR----GSKGLQELLR 99
            M QLV D V V+   + S+       E V+ K GV P  +PDL GL GD+SDNIPGV G+GPK+ + LLE+FGNL+ +FD ++ +   G+R     ++ L EL R
Sbjct:  138 MFQLVNDNVSVLMSLKGSSELEKFDREAVKEKMGVYPERIPDLKGLEGDSSDNIPGVPGVGPKTATALLEQFGNLDAVFDSLEQIDKKGLREKLAANRELAELSR 242          
BLAST of mRNA_F-serratus_M_contig143.3069.1 vs. uniprot
Match: A0A4D6Y481_BUCMH (53EXOc domain-containing protein n=1 Tax=Buchnera aphidicola subsp. Melaphis rhois TaxID=118103 RepID=A0A4D6Y481_BUCMH)

HSP 1 Score: 84.0 bits (206), Expect = 3.050e-17
Identity = 41/96 (42.71%), Postives = 60/96 (62.50%), Query Frame = 0
Query:    3 QLVGDRVHVMYRRSNGYGVLGAEEVQAKFGVKPASLPDLFGLAGDASDNIPGVRGIGPKSGSRLLERFGNLEGIFDGVDGVGSLGIRGSKGLQELL 98
            QLV     ++  +S    +LG EE++ K GV P  +PDLFGL GD SDNIPGV  IG K+   LL++FG+L+ I++  D +     RG+K + ++L
Sbjct:  144 QLVNSHTSILEMKSKK--ILGEEEIKKKHGVIPTLIPDLFGLMGDKSDNIPGVSRIGEKTAICLLKKFGSLKNIYNNTDKISQCSFRGAKNIAKIL 237          
BLAST of mRNA_F-serratus_M_contig143.3069.1 vs. uniprot
Match: A0A660PUT5_9BACT (DNA polymerase I (Fragment) n=1 Tax=candidate division Zixibacteria bacterium TaxID=2053527 RepID=A0A660PUT5_9BACT)

HSP 1 Score: 84.7 bits (208), Expect = 4.620e-17
Identity = 42/89 (47.19%), Postives = 60/89 (67.42%), Query Frame = 0
Query:    3 QLVGDRVHVMY--RRSNGYGVLGAEEVQAKFGVKPASLPDLFGLAGDASDNIPGVRGIGPKSGSRLLERFGNLEGIFDGVDGVGSLGIR 89
            QLV DRV +    + S+     G +EV+AKFGV P  + D   L GD+SDN+PGVRG+GPK+  +LLE+FG+LEG+ +  + + + GIR
Sbjct:  144 QLVSDRVKIYNPGKASDSPQRFGRKEVKAKFGVYPELVVDKLALMGDSSDNVPGVRGVGPKTADKLLEQFGSLEGVLNNHEQISAKGIR 232          
BLAST of mRNA_F-serratus_M_contig143.3069.1 vs. uniprot
Match: A0A7S1MNZ5_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1MNZ5_ALECA)

HSP 1 Score: 83.2 bits (204), Expect = 6.310e-17
Identity = 43/99 (43.43%), Postives = 62/99 (62.63%), Query Frame = 0
Query:    1 MCQLVGDRVHVM-YRRSNGYGVLGAEEVQAKFGVKPASLPDLFGLAGDASDNIPGVRGIGPKSGSRLLERFGNLEGIFDGVDGVGSLGIRGSKGLQELL 98
            +CQ+VG  V +  Y +   Y   G   V+++ GV+P  +PD  GLAGDA DNIPGV+G+GPK+   LL +F ++E IF G+  V  L +RG+ G+   L
Sbjct:  204 LCQVVGPSVVLHDYAKGERYDAKG---VRSRLGVRPEQVPDFLGLAGDAVDNIPGVKGLGPKTAVALLAKFKDIEAIFSGLKRVEKLPLRGAAGVAARL 299          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig143.3069.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEW8_9PHAE3.380e-4473.4753EXOc domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A523PTW5_9BACT3.190e-1952.04Exodeoxyribonuclease IX n=1 Tax=Planctomycetes bac... [more]
A0A1Y1RZ43_9SPIO5.430e-1847.00DNA polymerase I n=1 Tax=Marispirochaeta aestuarii... [more]
A0A518EZ41_9BACT8.290e-1848.98DNA polymerase I n=1 Tax=Planctomycetes bacterium ... [more]
A0A7C4S2F5_9BACT8.910e-1854.02Flap endonuclease n=1 Tax=Lentisphaerae bacterium ... [more]
A0A7V4PPR6_9DELT1.870e-1741.8453EXOc domain-containing protein (Fragment) n=1 Ta... [more]
A0A1V5VHJ4_9BACT1.890e-1744.76DNA polymerase I n=1 Tax=bacterium ADurb.Bin236 Ta... [more]
A0A4D6Y481_BUCMH3.050e-1742.7153EXOc domain-containing protein n=1 Tax=Buchnera ... [more]
A0A660PUT5_9BACT4.620e-1747.19DNA polymerase I (Fragment) n=1 Tax=candidate divi... [more]
A0A7S1MNZ5_ALECA6.310e-1743.43Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008918Helix-hairpin-helix motif, class 2SMARTSM00279HhH_4coord: 35..70
e-value: 4.8E-10
score: 49.4
NoneNo IPR availableGENE3D3.40.50.1010coord: 1..35
e-value: 1.1E-23
score: 85.7
NoneNo IPR availableGENE3D1.10.150.20coord: 36..83
e-value: 1.1E-23
score: 85.7
IPR020045DNA polymerase I-like, H3TH domainPFAMPF013675_3_exonuccoord: 33..82
e-value: 9.9E-16
score: 58.1
IPR038969Flap endonucleasePANTHERPTHR42646FAMILY NOT NAMEDcoord: 1..89
IPR0362795'-3' exonuclease, C-terminal domain superfamilySUPERFAMILY478075' to 3' exonuclease, C-terminal subdomaincoord: 32..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig143contigF-serratus_M_contig143:379918..381032 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig143.3069.1mRNA_F-serratus_M_contig143.3069.1Fucus serratus malemRNAF-serratus_M_contig143 379918..381058 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig143.3069.1 ID=prot_F-serratus_M_contig143.3069.1|Name=mRNA_F-serratus_M_contig143.3069.1|organism=Fucus serratus male|type=polypeptide|length=99bp
MCQLVGDRVHVMYRRSNGYGVLGAEEVQAKFGVKPASLPDLFGLAGDASD
NIPGVRGIGPKSGSRLLERFGNLEGIFDGVDGVGSLGIRGSKGLQELLR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008918HhH2
IPR020045DNA_polI_H3TH
IPR038969FEN_bact-like
IPR0362795-3_exonuclease_C_sf