prot_F-serratus_M_contig1425.3042.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1425.3042.1
Unique Nameprot_F-serratus_M_contig1425.3042.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length368
Homology
BLAST of mRNA_F-serratus_M_contig1425.3042.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE)

HSP 1 Score: 223 bits (567), Expect = 2.370e-65
Identity = 125/347 (36.02%), Postives = 206/347 (59.37%), Query Frame = 0
Query:   17 DVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMFGPMHAGLLWSKKFGRELMAKGFERSQADPFVFRRKHLGKAVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKAKTVTLDQQRYAQTVTERFGIR--KTSVIPVSSGKAPPSKADGPQNDAKIAEMHGIPYREAVGALMWVASMTRPDLAYTAHTLAKFGDKPGPEHWKAVMKALQYLKRTAILGVTYG-GATEDVKLSAWVDADHASCPDTRCSVSGGAVILGGGATSWFSRAQRITTTATSESEYVALAEIVNELRFIRQIKAFMVPPIDYN-IRVHEDNEGAIKMA 359
            D++ AF+++++ E++++ LP G       + +L K+++G   A   W     R L+  GF +  AD  VFR    G+ ++IIVV+VDD+  + + ++ +    EDL    P+K+LGE+ +Y  C   RD +   + + QQR+A+ +   +GI   ++  +PVS         D  +N+A       +P+RE VG+LMW+A+ TRPD+A     +A++   P   HWKA +  L Y++RT+ +G+T+  G    + +  +VDAD+AS    R SVSGG V+ GGG  +WFSR Q+  T +T+E+EYVA+A+++ E+ F+RQ+  FM+P      I V EDN+GAI++A
Sbjct:   39 DIQQAFVQSELDEDVFMRLPQGCGRLSGLIVKLCKSLYGLKQASRHWHSHLTRCLLLLGFLQCLADACVFRLMEEGRVIMIIVVHVDDIFAVGQKERCDKFG-EDLNEMVPVKNLGELRWYSACFYERDVERGLLRISQQRFAEELAAEYGIEWGRSVPLPVSV-----KLTDFDENEACA----DVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIA 375          
BLAST of mRNA_F-serratus_M_contig1425.3042.1 vs. uniprot
Match: H3GB17_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB17_PHYRM)

HSP 1 Score: 221 bits (564), Expect = 3.030e-65
Identity = 133/353 (37.68%), Postives = 196/353 (55.52%), Query Frame = 0
Query:   12 EGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGR--LQKAMFGPMHAGLLWSKKFGRELMAKGFERSQADPFVFRRKHLGKAVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKAKTVTLDQQRYAQTVTERFGIRKTSVI--PVSSGKAPPSKADGPQNDAKIAEMHGIPYREAVGALMWVASMTRPDLAYTAHTLAKFGDKPGPEHWKAVMKALQYLKRTAILGVTYGGATEDVKLSAWVDADHASCPDTRCSVSGGAVILGGGATSWFSRAQRITTTATSESEYVALAEIVNELRFIRQIKAFMVPPIDYNIRVHEDNEGAIKMAE 360
            E   +DV+ AFL  DV EELY++ PDG+ D  N   +  L +A++G   A   W+ K  + L  +GF RS ADP V+ R+   K   II+VYVDDL++ S TK +  +  + L+  F IK+LGE+ Y LG  I R+R  KT+ ++Q+ Y Q + E+FG+ K   +  P  S     SK   P  D      +  PYRE VGALM++A+ TRPD+A     +AKF ++    HW A  + L+YLK T  LG+ + G T+  +L  + DA  A   DTR S +G    L G A SW S+ Q    T+++E+EY+AL     E  ++RQ+   +         + +DN+G I +A+
Sbjct:    2 EAENVDVDTAFLYGDVEEELYMDQPDGFEDQVNPTKKCLLMQALYGTKQAARQWNSKLNKHLEGQGFHRSAADPCVYVRRSDSK-FSIIIVYVDDLMIFSRTKAEIGEIKKALKREFSIKELGELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEKFGVEKCKAVHTPADSN----SKLVKPAEDEVFVPRY--PYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKG-ELIGYADASWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVAATTIFQDNQGCIALAK 346          
BLAST of mRNA_F-serratus_M_contig1425.3042.1 vs. uniprot
Match: A0A6H5KG67_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG67_9PHAE)

HSP 1 Score: 221 bits (564), Expect = 1.090e-63
Identity = 132/368 (35.87%), Postives = 214/368 (58.15%), Query Frame = 0
Query:    1 MALAVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMFGPMHAGLLWSKKFGRELMAKGFERSQADPFVFRRKHLGKAVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKAKTVTLDQQRYAQTVTERFGIRKTSVIPV-SSGKAPPSKADGPQNDAKIAEMHGIPYREAVGALMWVASMTRPDLAYTAHTLAKFGDKPGPEHWKAVMKALQYLKRTAILGVTYG-GATEDVKLSAWVDADHASCPDTRCSVSGGAVILGGGATSWFSRAQRITTTATSESEYVALAEIVNELRFIRQIKAFMVPP-IDYNIRVHEDNEGAIKMAEKRFSS 365
            M  A+   LD E    D++ AF+ A + E++++ +P+G      ++ +L K+++G   A   W     + L+A GFE+  AD  VFR    G+ V+++ V+VDD+  +  TK+   Q  +DL    P+K LGE+ +Y GC+  RDR+A  +T+ QQ Y + + ER+G+     IP+ ++ K     AD P  +         P+R  VG+L+W+A +TRPD+A +   +A++   P   HWKA +  L Y  RT+  G+ +  G      L  +VDAD+AS    R SVSGG V+  GGA +WFS+AQ+  T +T+ +E+VA+A++  E+ F+RQ+  FM+P  +   I ++EDNEGAI++A+   S+
Sbjct:   23 MLAALACELDLEFCHSDIDQAFVRAPLKEDIFMRMPEGCGALSGKIVQLNKSLYGLRQASREWYALLKKCLLALGFEQCMADSCVFRFVEGGEVVLLLEVHVDDIFAVG-TKERCDQFGKDLGEYVPVKSLGELKWYSGCYYERDREAGRLTISQQTYTEELGERYGVEWGGGIPLPTTWKLWDFDADEPSVEH--------PFRALVGSLLWIALLTRPDIANSVRAVARYSGAPKLIHWKAALSILGYAVRTSSFGICFQRGTVSGFTLITFVDADYASRAADRRSVSGGVVMCAGGAIAWFSKAQKCVTLSTTPAEFVAVADMGKEILFLRQVWRFMLPKELRPCIPLYEDNEGAIQIAKYPISN 381          
BLAST of mRNA_F-serratus_M_contig1425.3042.1 vs. uniprot
Match: H3H7M7_PHYRM (CCHC-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7M7_PHYRM)

HSP 1 Score: 223 bits (569), Expect = 1.530e-61
Identity = 134/355 (37.75%), Postives = 197/355 (55.49%), Query Frame = 0
Query:   10 DWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGR--LQKAMFGPMHAGLLWSKKFGRELMAKGFERSQADPFVFRRKHLGKAVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKAKTVTLDQQRYAQTVTERFGIRKTSVI--PVSSGKAPPSKADGPQNDAKIAEMHGIPYREAVGALMWVASMTRPDLAYTAHTLAKFGDKPGPEHWKAVMKALQYLKRTAILGVTYGGATEDVKLSAWVDADHASCPDTRCSVSGGAVILGGGATSWFSRAQRITTTATSESEYVALAEIVNELRFIRQIKAFMVPPIDYNIRVHEDNEGAIKMAE 360
            D E   +DV+ AFL  DV EELY++ PDG+ D  N   +  L +A++G   A   W+ K  + L  +GF RS ADP V+ R+   K   II+VYVDDL++ S TK +  +  + L+  F IK+LGE+ Y LG  I R+R  KT+ ++Q+ Y Q + E FG+ K   +  P  S     SK   P  D      +  PYRE VGALM++A+ TRPD+A     +AKF ++    HW A  + L+YLK T  LG+ + G T+  +L  + DA+ A   DTR S +G    L G A SW S+ Q    T+++E+EY+AL     E  ++RQ+   +         + +DN+G I +A+
Sbjct:  769 DMEAENVDVDTAFLYGDVEEELYMDQPDGFEDQVNPTKKCLLMQALYGTKQAARQWNSKLNKHLEGQGFHRSAADPCVYVRRSDSK-FSIIIVYVDDLMIFSRTKAEIGEIKKALKREFSIKELGELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEEFGVEKCKAVHTPADSN----SKLVKPSEDEDFVPRY--PYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTPDLGLVFNGGTKG-ELIGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVGATTIFQDNQGCIALAK 1115          
BLAST of mRNA_F-serratus_M_contig1425.3042.1 vs. uniprot
Match: H3G9E3_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G9E3_PHYRM)

HSP 1 Score: 214 bits (545), Expect = 1.650e-61
Identity = 131/365 (35.89%), Postives = 200/365 (54.79%), Query Frame = 0
Query:    2 ALAVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGR--LQKAMFGPMHAGLLWSKKFGRELMAKGFERSQADPFVFRRKHLGKAVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKAKTVTLDQQRYAQTVTERFGIRKTSVIPVSSGKAPPSKADGPQNDAKIAEMHGI----PYREAVGALMWVASMTRPDLAYTAHTLAKFGDKPGPEHWKAVMKALQYLKRTAILGVTYGGATEDVKLSAWVDADHASCPDTRCSVSGGAVILGGGATSWFSRAQRITTTATSESEYVALAEIVNELRFIRQIKAFMVPPIDYNIRVHEDNEGAIKMAE 360
            +LA  A  D E   +DV+ AFL  DV EELY++ PDG+ D  N   +  L++A++G   A   W+ K  + L  +GF RS ADP V+ R+   +   I+V+YVDDL++ S+TK+        L+  F IK+LGE+ Y LG  I R+R+ KT+ ++Q+ Y + + E+FG+ K         KA  + AD      K+ E        PYRE VGALM++A+ TRPD+A     +AKF ++    HW A  + L+YLK T  +G+ + GA +   +  + DA+ A   DTR S +G    L G A SW S+ Q    T+++E+EY +L     E   +R +   M         +++DN+G I +A+
Sbjct:   78 SLATAAEEDMEAENVDVDTAFLYGDVEEELYMDQPDGFEDQSNPAMKCLLKQALYGTKQAARQWNSKLNKHLEDQGFRRSDADPCVYVRRSTDE-YSIVVIYVDDLMLFSKTKEHIESIKVALKKEFSIKELGELKYCLGIEIDRNREDKTILMNQRAYIKRLAEKFGVDKC--------KAVHTPADCNSKLVKMTEEEAFVAKYPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDMGIVFNGAIKGEPIG-YADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYTSLYSATQEAVRLRLLLKDMGYEDQGATLIYQDNQGCIALAK 432          
BLAST of mRNA_F-serratus_M_contig1425.3042.1 vs. uniprot
Match: A0A6H5K307_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K307_9PHAE)

HSP 1 Score: 217 bits (552), Expect = 1.970e-61
Identity = 129/368 (35.05%), Postives = 212/368 (57.61%), Query Frame = 0
Query:    1 MALAVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMFGPMHAGLLWSKKFGRELMAKGFERSQADPFVFRRKHLGKAVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKAKTVTLDQQRYAQTVTERFGIRKTSVIPV-SSGKAPPSKADGPQNDAKIAEMHGIPYREAVGALMWVASMTRPDLAYTAHTLAKFGDKPGPEHWKAVMKALQYLKRTAILGVTYG-GATEDVKLSAWVDADHASCPDTRCSVSGGAVILGGGATSWFSRAQRITTTATSESEYVALAEIVNELRFIRQIKAFMVPP-IDYNIRVHEDNEGAIKMAEKRFSS 365
            M  A+   LD E    D++ AF+ A + E +++ +P+G      ++ +L K+++G   A   W     + L+A GFE+  AD  +FR    G+ V+++VV+VDD+  +  TK+   Q  +DL    P+K LGE+ +Y GC+   DR+A  +T+ QQ Y + + ER+G+     IP+ ++ K     AD P  +         P+R  VG+L+W+A +TRPD+A +   +A++   P   HWKA +  L Y  RT+  G+++  G      L  +V AD+AS    R S SGG V+  GGA +WFS+ Q+  T +T+++EYVA+A++  E+ F+RQ+  FM+P  +   I ++EDNEGAI++A+   S+
Sbjct:  202 MLAALACELDLELCHFDIDQAFVRAPLNENIFMRMPEGCGALSGKIVQLNKSLYGLRQASREWYALLKKCLLALGFEQCMADSCLFRFVEGGEVVLLLVVHVDDIFAVG-TKERCDQFGKDLGEYVPVKSLGELKWYSGCYYEGDREAGRMTISQQTYTEELGERYGVEWGGGIPLPTTWKLWDFDADEPSVEH--------PFRALVGSLLWIALLTRPDIANSVRAVARYSGAPKLIHWKAALSFLGYAVRTSSFGISFQRGTVSGFSLITFVYADYASRAADRRSESGGVVMCAGGAIAWFSKTQKCVTLSTTQAEYVAMADMGKEILFLRQVWRFMLPKELRPCIPLYEDNEGAIQIAKHPISN 560          
BLAST of mRNA_F-serratus_M_contig1425.3042.1 vs. uniprot
Match: A0A0A9Z683_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=3 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Z683_LYGHE)

HSP 1 Score: 222 bits (565), Expect = 6.380e-61
Identity = 126/362 (34.81%), Postives = 213/362 (58.84%), Query Frame = 0
Query:    3 LAVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMFGPMHAGLLWSKKFGRELMAKGFERSQADPFVFRRKHLGKAVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKAKTVTLDQQRYAQTVTERFGIRKTSVIPVSSGKAPP---SKADGPQNDAKIAEMHGIPYREAVGALMWVASMTRPDLAYTAHTLAKFGDKPGPEHWKAVMKALQYLKRTAILGVTYGGATEDVKLSAWVDADHASCPDTRCSVSGGAVILGGGATSWFSRAQRITTTATSESEYVALAEIVNELRFIRQIKAFMVPPID-YNIRVHEDNEGAIKMAE 360
            LA+ A  D +  Q+D   AFL+ D+TEE+Y+  P+GY++S  +V RL+K+++G   A  +W+ K  R L   G  +S+ DP ++  K   K +V + V+VDDLL+ S+ K+   +    L   F + D+GE  + LG  I+RDR+ K + +DQ+ Y   V  RFG+   +  P ++   P    SK   P +  +  +M  IPY+EAVG+L++ + + RPD+A+    +++F   PGP HW AV + L+Y+K T+   + Y G T+  +++ + D+D AS  D R SV+G   ++  G+ SW ++ Q  T  +T+E+EY+AL+    E  ++R +   +VPP +   +R+  DN+GA+ +A+
Sbjct:  937 LALAAKRDMDIHQMDAVSAFLQGDLTEEIYMRQPEGYQES-GKVCRLRKSLYGLKQASRVWNIKLDRSLKTIGLRQSKFDPCIYY-KSSQKKMVFVAVWVDDLLIFSDDKKLTQEVKSQLMKCFKMTDIGEAKFVLGFQISRDRERKKIWMDQRAYIDNVLIRFGMENCN--PAATPLDPNIKLSKDQQPSSPDERKKMEAIPYQEAVGSLLFASQVCRPDIAFAVSLVSRFNSNPGPAHWAAVKRILRYMKGTSDWKLEYDG-TKSSEITGYCDSDFASDVDERKSVTGYVFLMCDGSVSWGTKKQPTTALSTTEAEYMALSAATQEALWLRGLSEELVPPSERIPLRIFVDNQGALNLAQ 1293          
BLAST of mRNA_F-serratus_M_contig1425.3042.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 6.600e-61
Identity = 125/347 (36.02%), Postives = 204/347 (58.79%), Query Frame = 0
Query:   17 DVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMFGPMHAGLLWSKKFGRELMAKGFERSQADPFVFRRKHLGKAVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKAKTVTLDQQRYAQTVTERFGIR--KTSVIPVSSGKAPPSKADGPQNDAKIAEMHGIPYREAVGALMWVASMTRPDLAYTAHTLAKFGDKPGPEHWKAVMKALQYLKRTAILGVTYG-GATEDVKLSAWVDADHASCPDTRCSVSGGAVILGGGATSWFSRAQRITTTATSESEYVALAEIVNELRFIRQIKAFMVPPIDYN-IRVHEDNEGAIKMA 359
            D++ AF+++++ E++++ LP G       + +L K+++G   A   W     R L+  GF R  AD  VFR    G  ++IIVV+VDD+  + + ++ +     DL    P+K+LGE+ +Y  C   RD +   + + QQR+A+ +   +G+   K+  +PVS         D  +N+A       +P+RE VG+LMW+A+ TRPD+A     +A++   P   HWKA +  L Y++RT+ +G+T+  G    + +  +VDAD+AS    R SVSGG V+ GGG  +WFSR Q+  T +T+E+EYVA+A+++ E+ F+RQ+  FM+P      I V EDN+GAI++A
Sbjct: 1073 DIQQAFVQSELEEDVFLRLPQGCGRLSGMIVKLCKSLYGLKQASRQWHAHLTRCLLLLGFVRCLADACVFRLMEDGCVIMIIVVHVDDIFAVGQKERCDKFG-SDLNEMVPVKNLGELRWYSACFYQRDLERGLLRISQQRFAEELAAEYGVEWGKSVPLPVSV-----KLTDFDENEACA----DVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIA 1409          
BLAST of mRNA_F-serratus_M_contig1425.3042.1 vs. uniprot
Match: A0A2P6Q6P3_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6Q6P3_ROSCH)

HSP 1 Score: 212 bits (540), Expect = 1.050e-60
Identity = 130/365 (35.62%), Postives = 204/365 (55.89%), Query Frame = 0
Query:    3 LAVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQ--VGRLQKAMFGPMHAGLLWSKKFGRELMAKGFERSQADPFVFRRKHLGKAVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKAKTVTLDQQRYAQTVTERFGIRKTSVIPVSSGKA-PPSKADGPQNDAKIAEMHGIPYREAVGALMWVASMTRPDLAYTAHTLAKFGDKPGPEHWKAVMKALQYLKRTAILGVTYGGATEDVKLSAWVDADHASCPDTRCSVSGGAVILGGGATSWFSRAQRITTTATSESEYVALAEIVNEL----RFIRQIKAFMVPPIDYNIRVHEDNEGAIKMAE 360
            L + A +D E  QLDV+ AFL  D+ EE+Y+E P+G+     Q  V +L+K+++G   A   W KKF   ++  G++R+ ADP V+ ++  G   +I+++YVDD+L++ +      +   DL  SF +KDLG     LG  ITRDR+AK + L Q+RY + V ERF +++   +    G     S+   P    +  +M GIPY  AVG+LM+    TRPD+A+    ++++   PG EHW+AV   L+YL+ T+ L + +GG+  +  L  + DAD A   D R S S       GGA SW S+ Q+    +T+ESEY+A  E   E+    RF++++          N  VH D++ AI +++
Sbjct:   79 LGMAASMDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVERKQHMVCKLKKSLYGLKQAPRQWYKKFDSFMVGHGYKRTDADPCVYLQRFTGGNFIILLLYVDDMLIVGKDVSMIRKLKADLSKSFDMKDLGPAKQILGMEITRDRQAKKLWLSQERYVERVLERFNMKEAKSVSSPLGNHFKLSRLSCPTTQVEKDKMAGIPYSSAVGSLMYAMVCTRPDIAHAVGVVSRYLSNPGREHWEAVKWILKYLRGTSKLCLCFGGS--EPILEGFTDADLAGDLDNRKSTSAYLFTFSGGAVSWQSKLQKCVALSTTESEYLAANEAGKEMIWLQRFVQELGVKQG-----NYVVHCDSQSAIHLSK 436          
BLAST of mRNA_F-serratus_M_contig1425.3042.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 2.020e-60
Identity = 131/353 (37.11%), Postives = 206/353 (58.36%), Query Frame = 0
Query:   17 DVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMFGPMHAGLLWSKKFGRELMAKGFERSQADPFVFRRKHLGKAVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKAKTVTLDQQRYAQTVTERFGIRKTSVIPVSSGKAPPSKAD-GPQNDAKIAEMHGIPYREAVGALMWVASMTRPDLAYTAHTLAKFGDKPGPEHWKAVMKALQYLKRTAILGVTYGGATEDVKLSAWVDADHASCPDTRCSVSGGAVILGGGATSWFSRAQRITTTATSESEYVALAEIVNELRFIRQIKAFMVPPID-YNIRVHEDNEGAIKMAEKRFSSRR 367
            DV+ A+  A + EE++++LP G  D  +++ + ++A++G   +G  W       L+  GFE+ +ADP VFR+      V+IIV+YVDD+LV   + +D  + L  L   FP K+LGE  ++ GC I RD +A T+ + Q  Y  ++ ERF ++ TS IP + G      AD GP+ + +  E    P REA+G++MWV++ +RPD+++    +A+    P   HW A+ K L YLK T  LG+TY   +  + L+ +VDA +A   D R SVSG A  +GG   S  S+ Q I + +++E+EY+A  E V E  F+R + +F+ P     +I+V EDN+GAI + +   SS R
Sbjct:  849 DVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAG-SDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPG------ADLGPKREDE--EGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGS-GLGLAVYVDASYADTEDRR-SVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGR 1190          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1425.3042.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEF2_9PHAE2.370e-6536.02Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3GB17_PHYRM3.030e-6537.68Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KG67_9PHAE1.090e-6335.87Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3H7M7_PHYRM1.530e-6137.75CCHC-type domain-containing protein n=1 Tax=Phytop... [more]
H3G9E3_PHYRM1.650e-6135.89Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K307_9PHAE1.970e-6135.05Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0A9Z683_LYGHE6.380e-6134.81Retrovirus-related Pol polyprotein from transposon... [more]
A0A6H5JHY5_9PHAE6.600e-6136.02Integrase catalytic domain-containing protein n=2 ... [more]
A0A2P6Q6P3_ROSCH1.050e-6035.62Putative RNA-directed DNA polymerase n=1 Tax=Rosa ... [more]
A0A6H5KSG8_9PHAE2.020e-6037.11Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 3..171
e-value: 5.5E-31
score: 108.0
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 195..359
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 16..361
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 195..359

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1425contigF-serratus_M_contig1425:130909..132012 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1425.3042.1mRNA_F-serratus_M_contig1425.3042.1Fucus serratus malemRNAF-serratus_M_contig1425 130822..132164 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1425.3042.1 ID=prot_F-serratus_M_contig1425.3042.1|Name=mRNA_F-serratus_M_contig1425.3042.1|organism=Fucus serratus male|type=polypeptide|length=368bp
MALAVMALLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQ
KAMFGPMHAGLLWSKKFGRELMAKGFERSQADPFVFRRKHLGKAVVIIVV
YVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISYYLGCHITRDRKAKT
VTLDQQRYAQTVTERFGIRKTSVIPVSSGKAPPSKADGPQNDAKIAEMHG
IPYREAVGALMWVASMTRPDLAYTAHTLAKFGDKPGPEHWKAVMKALQYL
KRTAILGVTYGGATEDVKLSAWVDADHASCPDTRCSVSGGAVILGGGATS
WFSRAQRITTTATSESEYVALAEIVNELRFIRQIKAFMVPPIDYNIRVHE
DNEGAIKMAEKRFSSRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like