prot_F-serratus_M_contig1412.2987.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1412.2987.1
Unique Name	prot_F-serratus_M_contig1412.2987.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	192

Homology

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BLAST of mRNA_F-serratus_M_contig1412.2987.1 vs. uniprot
Match: D7G0W8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0W8_ECTSI)

HSP 1 Score: 178 bits (451), Expect = 5.240e-53
Identity = 95/172 (55.23%), Postives = 121/172 (70.35%), Query Frame = 0

Query:   16 PSRPPLIGQGSVTRIELAEQRRFKSKDLFTRLSVKHILSVAAVIAMVALTFFYGPTDGPKLAKRNAALVPGDRLKGGEYISFCTSIIATGCKPKYLLLTRDGSLGVYEGSGPHARKTMLWSSGLGSKGN--VQSVHELVYTGYKIILNKNGKMRWVSPVKALPKHLQPWPFA 185
            PS P  I    V + E    R F S+ L  +LS   +LSV A+    AL  F+G  DGPKL KR+A L PGDRLKGG+YISFCTSIIATGCKPKY  L RDGSLGVY G  P+A+K  LW++G G+KG    ++ +ELVYTG +++LNK+GK++W S VK+LPK+++PWP A
Sbjct:   65 PSSPRKITMRPVVKEESMLSRYF-SQSLPAKLSA--VLSVVAIAVAAAL--FFGEGDGPKLVKRDAPLFPGDRLKGGQYISFCTSIIATGCKPKYFELGRDGSLGVYGGKSPYAQKAKLWTAGTGAKGGGGKEAFYELVYTGDRVVLNKDGKVKWSSSVKSLPKNMRPWPLA 231

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1412.2987.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1412.2987.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G0W8_ECTSI	5.240e-53	55.23	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 51..69
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 70..191
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..50
None	No IPR available	TMHMM	TMhelix		coord: 47..69
IPR036426	Bulb-type lectin domain superfamily	SUPERFAMILY	51110	alpha-D-mannose-specific plant lectins	coord: 109..170

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1412	contig	F-serratus_M_contig1412:107415..131118 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1412.2987.1	mRNA_F-serratus_M_contig1412.2987.1	Fucus serratus male	mRNA	F-serratus_M_contig1412 107334..132076 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1412.2987.1 ID=prot_F-serratus_M_contig1412.2987.1|Name=mRNA_F-serratus_M_contig1412.2987.1|organism=Fucus serratus male|type=polypeptide|length=192bp
MANILPRAVLSRPRSPSRPPLIGQGSVTRIELAEQRRFKSKDLFTRLSVK
HILSVAAVIAMVALTFFYGPTDGPKLAKRNAALVPGDRLKGGEYISFCTS
IIATGCKPKYLLLTRDGSLGVYEGSGPHARKTMLWSSGLGSKGNVQSVHE
LVYTGYKIILNKNGKMRWVSPVKALPKHLQPWPFALRRGGR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036426	Bulb-type_lectin_dom_sf