prot_F-serratus_M_contig1021.291.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1021.291.1
Unique Nameprot_F-serratus_M_contig1021.291.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length286
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1021.291.1 vs. uniprot
Match: A0A6H5KQR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQR3_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 4.270e-30
Identity = 80/199 (40.20%), Postives = 103/199 (51.76%), Query Frame = 0 
Query:   96 LPGSSVVRHKVRRQLFSEASEARPMVFCPFCGDGVLASGRLREHLEACYVFARSRGSQTHFEVEAAVRAVSGKGKKPALRAKGSCDEDPCEVAGTYSAEDKIAFHKASI--------REVASSATVPGDGNKSATDTTLEARGEKHEESFISDDREPSFVSLVQNSLADAKISGDGREMERCEGCGRTFAPGRLHSHAK 286
            LPGSSV+RH+VRRQLFSE SEARP+VFCPFCG+GV+ +  LR+HL+ CYV  R RGS+TH +VE A++AVS + +                  G++     +  H  S           V + A    +        T   RG    E           VS V + ++       G + ERCE CGRTFAPGRL SHAK
Sbjct:   98 LPGSSVLRHRVRRQLFSEDSEARPLVFCPFCGEGVVRARGLRDHLQECYVLDRCRGSETHKQVEVAIKAVSVENQMHTSATNTHGRRASSLNDGSFQDSSTLLQHALSPFVSKGNDPENVLAPAVASENSELGRVVATGGLRGTAGGE-----------VSGVSSEVSSGGGGAGGAKFERCEDCGRTFAPGRLRSHAK 285
[Close]
BLAST of mRNA_F-serratus_M_contig1021.291.1 vs. uniprot
Match: D8LFQ9_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFQ9_ECTSI)

HSP 1 Score: 129 bits (323), Expect = 8.610e-30
Identity = 90/213 (42.25%), Postives = 108/213 (50.70%), Query Frame = 0 
Query:   96 LPGSSVVRHKVRRQLFSEASEARPMVFCPFCGDGVLASGRLREHLEACYVFARSRGSQTHFEVEAAVRAVS-------------GKGKKPALRAKGSCDED---------PCEVAGTYSAEDKIAFHKASIREVASSATVPGDGNKSATDTTLEARGEKHEESFISDDREPSFVSLVQNSLADAKISGDGREMERCEGCGRTFAPGRLHSHAK 286
            LPGSSV+RH+VRRQLFSE SEARP+VFCPFCG+GV+ +G LR+HL+ CYV  R RGS+TH +VE A+RAVS             GKG   A    G   +D         P  V+     E+ +A   AS           G G  +A        GE               VS V   ++       G E ERC  CGRTFAPGRL SHAK
Sbjct:  896 LPGSSVLRHRVRRQLFSEDSEARPLVFCPFCGEGVVRAGGLRDHLQECYVLDRCRGSETHKQVEVAIRAVSVEHQMHTSATNTHGKG---ASSLNGGSFQDSSTLLQHALPPFVSKGNGPENVLAPAVASENSELGGVVATGGGRGAAA-------GE---------------VSGVGLEVSLGGGGAGGAEEERCGDCGRTFAPGRLRSHAK 1083
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1021.291.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KQR3_9PHAE4.270e-3040.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFQ9_ECTSI8.610e-3042.25WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13913zf-C2HC_2coord: 265..282
e-value: 3.1E-5
score: 23.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1021contigF-serratus_M_contig1021:235264..243814 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1021.291.1mRNA_F-serratus_M_contig1021.291.1Fucus serratus malemRNAF-serratus_M_contig1021 235262..243814 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1021.291.1 ID=prot_F-serratus_M_contig1021.291.1|Name=mRNA_F-serratus_M_contig1021.291.1|organism=Fucus serratus male|type=polypeptide|length=286bp
KAVRNESGINCGTLRNEEDGIASTLPRSVAAKAPGTPPTAILTISRDGDM
GATESELATRSTSRFAAAQSQAKENRIELRTGNGGHDGDLEVEEGLPGSS
VVRHKVRRQLFSEASEARPMVFCPFCGDGVLASGRLREHLEACYVFARSR
GSQTHFEVEAAVRAVSGKGKKPALRAKGSCDEDPCEVAGTYSAEDKIAFH
KASIREVASSATVPGDGNKSATDTTLEARGEKHEESFISDDREPSFVSLV
QNSLADAKISGDGREMERCEGCGRTFAPGRLHSHAK
back to top