mRNA_F-serratus_M_contig140.2912.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig140.2912.1 vs. uniprot
Match: D7G435_ECTSI (Alpha-(1,6)-fucosyltransferase, family GT23 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G435_ECTSI) HSP 1 Score: 204 bits (520), Expect = 3.590e-55 Identity = 119/359 (33.15%), Postives = 198/359 (55.15%), Query Frame = 3
Query: 138 ELPAHFSSHELGCPNRSGPVDAYVWRRVGFGSNVNMMILPWLHAI-VHGRQDLALMMGNHYHQNGEPDEYFEVVNCLETSNGAVADGFSCLFQPMPHVCVFHTRQNWNSFMIERNVSTAERENALKHIAVTDHEA---KISDIGQQLQGSGIDILAAKAALLDYFYLNWQPWVKRDIQIILDERTVATVRDGPYVGIHVRRGDKII--REAKAHDVQEYLKKAYLYINNSAEATVSVNDIKGIWVSSDDKQVVSYVEESFAEFFPKVELERIVWISDRASESTNASSSDPFPTKAKLMHYESYVVFFAELKMLSQADIFVGTFSSNVARITVLLRESRGIS-RGSSLSVDLQDWFPGRR 1193
E ++ E GC G +++WR G GSN+N M+ W++A+ V D+ +++G + + V+C E S G G+ C+F+PMPH+C F + ++W +M+ +++ AE L +A D +A +I L+GSG+D +AA AA+ Y + N PW++ D+ + ++ P++G+H+RRGDK+ R A + +EYL+ A ++ ++ +SV DIKGIWV+SD+ +V++ V++ ++ P V + I W S + T+ Y +V A+L+ L+ AD+FVGTFSSN+ R+ VLLRES G+ R S++S+D W GRR
Sbjct: 109 EWAVEYARGEEGCDLARG---SFMWRGQGLGSNINNMLNAWVYALSVEKWSDMTVVVG---------ENQMKWVDCGEESGGEAQTGWDCIFKPMPHLCTFPSAESWKEYMVSKDLPEAE----LVEVARLDQDAVRFHPEEIVASLEGSGVDHIAALAAMAKYLWSNVTPWLQADVDFVTRASPSDVFQESPFLGLHIRRGDKVTHGRRASMYLCKEYLEAAVEFLEGD-DSQLSVGDIKGIWVASDEPKVIAKVKQIAPDYLPNVSEDDIFWASGGVEGGPEIGRT---ATRTDKETYADFVYTLADLQQLTAADLFVGTFSSNMGRLLVLLRESIGLKDRASAVSID-GPWRAGRR 446
BLAST of mRNA_F-serratus_M_contig140.2912.1 vs. uniprot
Match: A0A6H5JTL0_9PHAE (GT23 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTL0_9PHAE) HSP 1 Score: 196 bits (499), Expect = 2.820e-52 Identity = 124/373 (33.24%), Postives = 200/373 (53.62%), Query Frame = 3
Query: 90 DIAAINGTSDYATILRELPAHFSSHELGCPNRSGPVDAYVWRRVGFGSNVNMMILPWLHAI-VHGRQDLALMMGNHYHQNGEPDEYFEVVNCLETSNGAVADGFSCLFQPMPHVCVFHTRQNWNSFMIERNVSTAERENA--LKHIAVTDHEAKISDIGQQLQGSGIDILAAKAALLDYFYLNWQPWVKRDIQIILDERTVATVRDGPYVGIHVRRGDKIIR-EAKAHDVQEYLKKAYLYINNSAEATVSVNDIKGIWVSSDDKQVVSYVEESFAEFFPKVELERIVWISDRASESTNASSSDPFPTKAKLMHYESYVVFFAELKMLSQADIFVGTFSSNVARITVLLRESRGIS-RGSSLSVDLQDWFPGRR 1193
+ AA T+ E A ++ E GC G +++WR G GSNVN M+ W++A+ V D+ +++ + + V+C E S G G+ CLF+PMPH+C F + + M+ + + A+ A L AV H +I L+GSG+D +AA AA+ Y + N PW++ D+ + ++ P++G+H+RRGDK+ + EA + +EYL+ A ++ + ++ +SV DIKGIWV+SD+ +V++ V++ ++ P V I W S + T+ Y +V FA+L+ L+ AD+FVGTFSSN+ R+ VLLRES G+ R S++S+D W GRR
Sbjct: 89 ESAAAAATAPAVLFSSEWAAEYARGEAGCDLARG---SFMWRGHGLGSNVNNMLNAWVYALSVEKWSDMTVVVD---------ENQMKQVDCEEESGGEAQAGWDCLFKPMPHLCTFPSAEE---HMVSKGLPKADLVEAARLDQDAVRFHP---EEIVASLEGSGVDHIAALAAMAKYLWSNVTPWLQADVDFVTRASPSDVFQESPFLGLHIRRGDKVSQGEASMYLCEEYLETAVEFLEGN-DSQLSVGDIKGIWVASDEPKVIAKVKQIAQDYLPNVSEGDIFWASGGVEGGPEIERT---ATRTDQETYADFVYTFADLQQLTAADLFVGTFSSNIGRLLVLLRESIGLKDRASAVSID-GPWRAGRR 438
BLAST of mRNA_F-serratus_M_contig140.2912.1 vs. uniprot
Match: D8LU01_ECTSI (GT23 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU01_ECTSI) HSP 1 Score: 126 bits (316), Expect = 4.030e-29 Identity = 81/277 (29.24%), Postives = 121/277 (43.68%), Query Frame = 3
Query: 57 LLCMCLRAVATDIAAINGTSDYATILRELPAHFSSHELGCPNRSGPVDAYVWRRVGFGSNVNMMILPWLHAIVHGRQDLALMMGNHYHQNGEPDEYFEVVNCLETSNGAVADGFSCLFQPMPHVCVFHTRQNWNSFMIERNVSTAERENALKHIAVTDHEAKISDIGQQLQGSGIDILAAKAALLDYFYLNWQPWVKRDIQIILDERTVATVRDGPYVGIHVRRGDKIIREAKAHDVQEYLKKAYLYINNSAEATVSVNDIKGIWVSSDDKQVVSYV 887
L+C+ + + ++ D A E F S LGC + +DAY WR G+GSN+N + + W +A++ GRQDLA+++ DE+F C TS G G+ C F +PH+C F Q L+D+ + QPW K DIQ ILDE +A +R+G YVG+H+RR DK E K + Y +K Y+ +S + DI G+W+S+D+ V + V
Sbjct: 16 LMCLGVSESVLERQGVDSRKDMAVFSNEWMEEFGSGALGCVGSA--IDAYEWRNAGYGSNINFLTIVWANAMMAGRQDLAVVV--------RTDEWFPRTICNVTSYGEETRGWPCFFAEVPHLCAFDADQ---------------------------------------------------MLVDHLHSYLQPWFKADIQRILDEPDIAEMRNGKYVGMHIRRTDKA-NETKLTKTEVYFRKVAQYLRSSPGG-LRAADITGLWLSTDEVSVFNEV 229
BLAST of mRNA_F-serratus_M_contig140.2912.1 vs. uniprot
Match: A0A6H5LR29_9PHAE (GT23 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LR29_9PHAE) HSP 1 Score: 120 bits (302), Expect = 1.050e-26 Identity = 71/182 (39.01%), Postives = 106/182 (58.24%), Query Frame = 3
Query: 627 NWQPWVKRDIQIILDERTVATVRDGPYVGIHVRRGDKIIR-EAKAHDVQEYLKKAYLYINNSAEATVSVNDIKGIWVSSDDKQVVSYVEESFAEFFPKVELERIVWISDRASESTNASSSDPFPTKAKLMHYESYVVFFAELKMLSQADIFVGTFSSNVARITVLLRES-RGISRGSSLSVD 1166
N PW++ D++ L+ + R P+VG+HVRRGDK+ EA+ + +EYL A + +N +A+ DI+ IWV+SDD +VV V ++FP V E IVW+S A T K Y+ +V+ FA+LKML+ +FVGT++SNV+R+ LLRE G +R S +S+D
Sbjct: 112 NLTPWLQEDVRKALERPDLDVFRRKPFVGLHVRRGDKVGEGEAQKVETKEYLSAAARFFDN--KASQDKQDIEAIWVASDDHKVVEEVRAIARQYFPNVLDEDIVWVSGGARGGA-------VTTHTKSQGYQGFVMVFADLKMLAAGSLFVGTYTSNVSRLVALLREGIHGHARDSCISLD 284
BLAST of mRNA_F-serratus_M_contig140.2912.1 vs. uniprot
Match: A0A1W0XB00_HYPDU (Alpha-(1,6)-fucosyltransferase n=1 Tax=Hypsibius dujardini TaxID=232323 RepID=A0A1W0XB00_HYPDU) HSP 1 Score: 72.8 bits (177), Expect = 1.230e-9 Identity = 50/163 (30.67%), Postives = 88/163 (53.99%), Query Frame = 3
Query: 702 PYVGIHVRRGDKIIREAKAHDVQEYLKKAYLY-INNSAEATVSVNDIKGIWVSSDDKQVVSYVEESFAEFFPKVELERIVWISDRASESTNASSSDPFPTKAKLMHYESYVVFFAELKMLSQADIFVGTFSSNVARITVLLRESRGISRGSSLSVDLQDWFPG 1187
P VGIHVRR DK+++EA+ H +Q YLK A Y + S SV + ++V+SDD +V+ ++ +++ + I +++E+ +++S ++ L+ + F LS++D V TFSS + ++ L++ R + GS S+D WFPG
Sbjct: 353 PVVGIHVRRTDKLLKEARLHSIQSYLKPAEDYWLQRSFRQPNSVP--RNLFVASDDARVLRDIQRKYSKH---------INILGKSNETRSSASLQSRYSEKSLLELLRDIYF------LSKSDFLVCTFSSLICKLAYELKQFREDATGSFTSLDDSYWFPG 498
BLAST of mRNA_F-serratus_M_contig140.2912.1 vs. uniprot
Match: A0A5J4YU31_PORPP (Alpha-(1,6)-fucosyltransferase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YU31_PORPP) HSP 1 Score: 66.2 bits (160), Expect = 1.090e-7 Identity = 55/187 (29.41%), Postives = 94/187 (50.27%), Query Frame = 3
Query: 642 VKRDIQIILDERTVATVRDGP----YVGIHVRRGDKIIREAKAHDVQEYLKKAYLYINNSAEATVSVNDIKGIWVSSDDKQVVSYVEESFAEFFPKVELE-RIVWISDRASESTNASSSDPFPTKAKLMHYESYVVFFAELKMLSQADIFVGTFSSNVARITVLLRESRGISRGSSLSVDLQDWFPG 1187
++R++++ LD V DG Y+G+H+RRGDK ++A + +Y+ N+ + D++ ++V SDD V++ +++ L IV S + E S+ ++ +L+ E EL +L +A FVGTFSSNV R+ V LR++R +S+S+D W PG
Sbjct: 262 LQRNVEMQLDALLVQA--DGSRLQGYMGVHIRRGDKY-KDAPYVPIAQYV--------NAIMWAANRYDLRMVYVCSDDFAVINELKDMVRARTAATSLRLAIVDTSQSSREGHEQRLSNNARSQNELVGVEMTAQLLLELSLLQRASFFVGTFSSNVGRLVVALRDARAPQ--TSISLDTA-WSPG 434
BLAST of mRNA_F-serratus_M_contig140.2912.1 vs. uniprot
Match: A0A2G9U1G9_TELCI (Uncharacterized protein n=1 Tax=Teladorsagia circumcincta TaxID=45464 RepID=A0A2G9U1G9_TELCI) HSP 1 Score: 61.6 bits (148), Expect = 2.170e-6 Identity = 49/175 (28.00%), Postives = 84/175 (48.00%), Query Frame = 3
Query: 681 VATVRDGPYVGIHVRRGDKIIREAKAHDVQEYLKKAYLYINNSAEATVSVNDIKGIWVSSDDKQVVSYVEESFAEFFPKVELERIVWISDRASESTNASSSDPFPTKAKLMHYESYVVFFAELKMLSQADIFVGTFSSNVARITVLLRESRGISRGSSLSVDLQDWFPGRRLLDL 1205
+ATV GP VG+HVRR DK+I EAK H V+EY+ A +Y + + N + ++V+SDD ++ +++ + + V+ + R +E+ S+ S +++ LS+ V TFSS+ R+ L ++R G + +D+F G L L
Sbjct: 14 IATV-PGPIVGVHVRRTDKLIEEAKYHSVEEYMTWADVYFQVQ-DRLLKRNVTRRVYVASDDPTILPKIKKMYPNYK--------VYGNVRFAEAAENRYSE-----------RSLRGLLSDVVTLSKCSYLVCTFSSHFCRVAYELMQARRGDAGENFQSLDEDYFYGGHRLHL 167
BLAST of mRNA_F-serratus_M_contig140.2912.1 vs. uniprot
Match: A0A7M7PAT1_STRPU (GT23 domain-containing protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7PAT1_STRPU) HSP 1 Score: 60.1 bits (144), Expect = 3.810e-6 Identity = 48/179 (26.82%), Postives = 91/179 (50.84%), Query Frame = 3
Query: 657 QIILDERTVATVRDGPYVGIHVRRGDKIIREAKAHDVQEYLKKAYLYINNSAEATVSVNDIKGIWVSSDDKQVVSYVEESFAEFFPKVELERIVWISD-RASESTNASSSDPFPTKAKLMHYESYVVFFAELKMLSQADIFVGTFSSNVARITV-LLRESRGISRGSSLSVDLQDWFPG 1187
Q +D +T A P VGIHVRR DK++ EAK+H ++EY+ Y E +V+ ++ +++++D+ ++ ++ + + V++SD + S+S N S ES + +L +L+++D V T SSN+ R+ +++ S + +SVD Q ++ G
Sbjct: 101 QQFIDNKTTALGFTHPIVGIHVRRTDKLVNEAKSHGIEEYMDHVEKYYQE-LEKRKAVS-VRRVFLATDEVGLLYEAKKKYPGY---------VFVSDNKISQSANVSLR---------WSEESLMGIIVDLHLLARSDFVVCTCSSNICRLVYEMIQHSHLDASKKLISVDRQYFWYG 259
BLAST of mRNA_F-serratus_M_contig140.2912.1 vs. uniprot
Match: UPI00054FC0E2 (hypothetical protein n=1 Tax=Dokdonia sp. PRO95 TaxID=1239415 RepID=UPI00054FC0E2) HSP 1 Score: 60.1 bits (144), Expect = 4.540e-6 Identity = 83/329 (25.23%), Postives = 149/329 (45.29%), Query Frame = 3
Query: 222 GFGSNVNMMILPWLHAIVHGRQDLALMMGNHYHQNGEPDEYFEVV-----NCLETSNGAVADGFSC--LFQPMPHVCVFHTRQNWNSFMIERNVSTAERENALKHIAVTDHEAKISDIGQQLQGSGIDILAAKAALLDYFYLNWQPWVKRDIQIILDERTVATVRDGPYVGIHVRRGDKIIREAKAHDVQEYLKKAYLYINNSAEATVSVNDIKGIWVSSDDKQVVSYVEE--SFAEFFPKVELERIVWISDRASESTNASSSDPFPTKAKLMHYESYVV-FFAELKMLSQADIFVGTFSSNVARITVLLRESRGISRGSSLSVDLQDW 1178
G GS +N ++L ++ +V+ +Q L++ + +G ++YFE +E N DG +++ + H ++ + Q +S + + +++ + + KI ++ GS D+L +L+ + L + K+ I +++R + GIHVRRGDK+IREA V+ YL+K N D+ ++V+SD+ QV+ +E S+ E+ E S N F + + + ES V+ E+++LS FVGTFSSN+ R+ L R + +S S+D DW
Sbjct: 30 GLGSELNNLLLTAVYCLVNKKQ---LVLYDSNWNSGRFEDYFEPFCERFKGIVEIPNYIFGDGGKKRRIYKKI-HYYLYPSYQLLDSSVWKE----------IRNPKLQSQKIKIPELA--FNGSSFDLLY----ILEKYLLQYNTKTKKIIHKEVNKRNWNR-----FSGIHVRRGDKLIREAGLFIVKCYLEKG----NEKGF------DMHDLFVASDNFQVLEELENYNSYIEYISYCE------------PSDNGHHQKSFNNQT-MSNIESQVLRLLIEIEILSLTKCFVGTFSSNIGRLVHLKRNTL-----NSYSLD-SDW 304
BLAST of mRNA_F-serratus_M_contig140.2912.1 vs. uniprot
Match: UPI000CB0A7A2 (hypothetical protein n=1 Tax=Shewanella sp. 10N.286.52.B9 TaxID=1880837 RepID=UPI000CB0A7A2) HSP 1 Score: 59.7 bits (143), Expect = 5.240e-6 Identity = 49/200 (24.50%), Postives = 94/200 (47.00%), Query Frame = 3
Query: 570 GSGIDILAAKAALLDYFYLNWQPWVKRDIQIILDERTVATVRDGPYVGIHVRRGDKIIREAKAHDVQEYLKKAYLYINNSAEATVSVNDIKGIWVSSDDKQVVSYVEESFAEFFPKVELERIVWISDRASESTNASSSDPFPTKAKLMHYESYVVFFAELKMLSQADIFVGTFSSNVARITVLLRESRGISRGSSLSVDL 1169
GS ++ + +AL Y+ +W K +++ + + Y IHVRRGDK+ +EA ++ Y+K ++N ++D+K ++VS+DD +S ++ P +EL+ + E +N F + + E++++ ++ FVG+F+SN+ +LR GI+ S SVD+
Sbjct: 107 GSILESESGLSALFSYYEKSWDFTDKFKVEV--NNKIQQLNLPSSYAAIHVRRGDKLRKEAVLKELYNYIK----FLN--------IDDLKCLYVSTDDFSTISDLKNILP---PHIELKYL------CDEESNGHEQSKFNKRPDYCIDDDISKLLLEVEIMRRSSSFVGSFTSNIGTAVYMLRH--GIN---SYSVDI 278 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig140.2912.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig140.2912.1 >prot_F-serratus_M_contig140.2912.1 ID=prot_F-serratus_M_contig140.2912.1|Name=mRNA_F-serratus_M_contig140.2912.1|organism=Fucus serratus male|type=polypeptide|length=400bp MRSSIETFCLFKALWLLCMCLRAVATDIAAINGTSDYATILRELPAHFSSback to top mRNA from alignment at F-serratus_M_contig140:703397..714789- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig140.2912.1 ID=mRNA_F-serratus_M_contig140.2912.1|Name=mRNA_F-serratus_M_contig140.2912.1|organism=Fucus serratus male|type=mRNA|length=11393bp|location=Sequence derived from alignment at F-serratus_M_contig140:703397..714789- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig140:703397..714789- >mRNA_F-serratus_M_contig140.2912.1 ID=mRNA_F-serratus_M_contig140.2912.1|Name=mRNA_F-serratus_M_contig140.2912.1|organism=Fucus serratus male|type=CDS|length=2400bp|location=Sequence derived from alignment at F-serratus_M_contig140:703397..714789- (Fucus serratus male)back to top |