mRNA_F-serratus_M_contig139.2813.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig139.2813.1 vs. uniprot
Match: D7FRA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRA0_ECTSI) HSP 1 Score: 741 bits (1914), Expect = 7.550e-249 Identity = 509/964 (52.80%), Postives = 578/964 (59.96%), Query Frame = 3
Query: 402 IGNDHPGDKSD-GLIPDHSLFEVSGSNVGAAVGDGSG-AGDDELVGMTWPAMRLARSASLSSTGSGEPEESEEWLVSLMERSKAAGAKGGRSKGPKGGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTPRSDVQCLHRWNKVLRPGLHKGPWTEEEDNIVRECVEHSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAFMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQNPGGPNQLTPDLLAKLKEAHAQMLNHPTSGSTQGMSDGSDTDNDSKESSMRIPVHPHRR-RESTPSPGAFGNLNLVHSGGEQLSSPPQGSLHCRPHSVTGALPGVPDESPGAGAEHGLPRHDLDAIRLARGAQAMHVMQARLGMDNGPNAANAGGNVDMDMRRPAESGRPHQPFMTHKPVDDGTSHETHTNSMPVV---KTVKAETLER-ATIRDTPDKQ-------------------GRSQALHPMAPPQHPRSR-------PLAGSNGQGAATSGGCSGNXXXXEGGMAALLGGASQLRPPRIDTNSGVKRESSGGNASLSQLLLTSPFGSDNTNARFTPS-ESMGHGQXXXXXXXXXXXXXXXXXXXXXGYSSTPAESPVSQAVRETRRQGTRMQKGEQVPLAVLPYFRFLSEEAQRNVMSQLIDNFQTTSITKRSGAASSSTAPSATXXXXXXSPGGPAFMSSPTFAKXXXXXXXXXXXXXXXXXXXXSAYQGIDDMMVD----GSSGMSAVEASCVSAAVAAVVMAPARANAQEMASLHMHRVLSAPLLSPRANTDGGRSRESRGLPGMDPHIQRLPSLRQRNVSEFSGSGATARDGAGVSKSNHKTFNTFGGXXXXXXXNSSASGTATASAFPSRGTDHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALRTEPMDMDMGRRNDWAQG-ARHRPPSR 3176
+G P D++D GLI + +LF+ +G G + GD G A DE + M W RL RS S+SSTGS + EESEEWL SL+E+SKAAGAKG RSKGPKGGKWTKEEDTRLREIVEHHGARNWRMVAEQLGT RSDVQCLHRWNKVLRPGLHKGPWTEEED+IVRECVEHSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQA+MGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQNPGG +QLTPDLL KLKEA+ QM P SGS QGMSD S TDND+KE S R +STPS AFG+ +L+H GGEQL+SPPQ +H R HS GAL G+ +SP + E R AR AQA ++AR G G E HT+S+ VV +TVK E LE+ AT ++ +KQ G+S LH M+PPQHP SR P AG + A GG +GGM ALLG ASQLRPPRIDTNS VKRES GG ASLSQLLLTSPFGS N ARF + +++G YSS AESPVSQAVRETRRQGTRMQ+GEQVPL+VLPYFRFLSEEAQRNVMSQLIDNFQTTSI KR G AS+S+A +AT SPGG AFM SP FAK A++ +D MMVD G +G S +SAAVAAV A + M+RVL AP +S AN++ + RLP LRQ + R+ G + N + G N A +T +R XXXXX A++TEPMD D GRR+DW Q RHRPPSR
Sbjct: 1 MGGAQPTDENDDGLIAEANLFDAAG---GGSEGDLVGVAPADEDLAMAWSGSRLVRSTSMSSTGSADAEESEEWLTSLVEKSKAAGAKGARSKGPKGGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTLRSDVQCLHRWNKVLRPGLHKGPWTEEEDSIVRECVEHSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQNPGGASQLTPDLLNKLKEAYEQMQVQPASGS-QGMSDESGTDNDTKEPSTRAAAXXXXXXHDSTPS--AFGDDDLLHPGGEQLTSPPQ-PMHARRHSAAGALTGMLSDSPES--ERRFRRRMGQEDVEARSAQAQGAVRARAGASERA----------------------------------GRESEKHTSSLAVVNELQTVKTEELEQPATTKERSEKQDHSHLLAPHGSAEAPAGGRGQSHMLHRMSPPQHPHSRLPGHPPRPFAGPSRSTGAGPGGAG----VGDGGMGALLGVASQLRPPRIDTNSTVKRESGGGPASLSQLLLTSPFGS-NDGARFAATNDAIGQ------PNTHTAEMETSTAPAGESYSSATAESPVSQAVRETRRQGTRMQEGEQVPLSVLPYFRFLSEEAQRNVMSQLIDNFQTTSIGKR-GVASTSSASAATSSAS--SPGGLAFMRSP-FAKGLAPVGSGGATASAGNGSSSPAFE-VDAMMVDHHRVGGTGAS------ISAAVAAV-------EAHASSDHDMNRVLPAPGVSTAANSEAAMEQS------------RLPPLRQ--------DPSDGRNSGGFGRVNGSSMGKNGSSLDLAGPNPPAVPASTGRDPTTRSPRSHMRHASESALPSAAMAXXXXX------------AMQTEPMD-DGGRRSDWNQRMGRHRPPSR 859
BLAST of mRNA_F-serratus_M_contig139.2813.1 vs. uniprot
Match: A0A7S2BQG7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BQG7_9STRA) HSP 1 Score: 275 bits (704), Expect = 4.030e-82 Identity = 128/164 (78.05%), Postives = 139/164 (84.76%), Query Frame = 3
Query: 666 RSKGPKGGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTPRSDVQCLHRWNKVLRPGLHKGPWTEEEDNIVRECVEHSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAFMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWL 1157
R GP GGKWTKEED LR IVE HGA+NWR VAE LG R+DVQCLHRWNKVLRPGLHKGPWTEEED IVR+ V GA KVKWS +A++L GRIGKQCRERWFNHLDP+I KGEW+PEEDRIVF AQ GNRW +IAKLLPGRTEN+VKNR+NSSARKKWL
Sbjct: 1 RKLGP-GGKWTKEEDASLRVIVEQHGAKNWRKVAELLGDTRTDVQCLHRWNKVLRPGLHKGPWTEEEDGIVRDMVLMYGAGKVKWSAIAAKLHGRIGKQCRERWFNHLDPNINKGEWTPEEDRIVFEAQNQFGNRWSDIAKLLPGRTENSVKNRWNSSARKKWL 163
BLAST of mRNA_F-serratus_M_contig139.2813.1 vs. uniprot
Match: A0A7S2R561_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R561_9STRA) HSP 1 Score: 283 bits (723), Expect = 2.140e-78 Identity = 167/356 (46.91%), Postives = 201/356 (56.46%), Query Frame = 3
Query: 120 GSATLPSPRNPPEKRTSEGTTASGQIAPDILRPPALRLQNQRISSQGS-------KRLDNRMSPHAAKARGMLDRGSAAPIGGHEGMPNDSAQGILEDQAVIGNDHPGDKSDGLIPDHSLFEVSGSNVGAAVGDGSGAGDDELVGMTWPAMRLARSASLSSTGSGEPEESEEWLVSLMERSKAAGAKGGRSKGPKGGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTPRSDVQCLHRWNKVLRPGLHKGPWTEEEDNIVRECVEHSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAFMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQN 1166
G P P PP +R E T AP + R PA + + IS+ + KR D+RMSP A+ RG+ MP S+ V G+ +KS G P+ +V E V T P + G G EE + R P GGKW++EED +LR IVE HGA+NW+ VAE LG RSDVQCLHRWNKVLRPGLHKGPWTE+ED IV + V G +KWSV+A+ LPGRIGKQCRERWFNHLDPSIKKGEW+PEED+++F AQ +GNRWCEIAKLLPGRTENAVKNR+NSSARK+WL +N
Sbjct: 3 GGVRDPGPPPPPSRR--EAFTKPSPRAPAVKRGPASQEVDSIISNAAAEMSIRREKRPDHRMSPAHARLRGLA-----------ADMPRGSS--------VAGSSSKHEKSSGA-PNLGRVKV------------------EHVSPTEPIPPVMGQHPWFPGGMGFSPFLEEPQLKPARRP------------PIGGKWSREEDDKLRAIVEQHGAKNWKKVAELLGPVRSDVQCLHRWNKVLRPGLHKGPWTEDEDRIVSDMVLAHGVGNIKWSVIAAELPGRIGKQCRERWFNHLDPSIKKGEWTPEEDKVLFEAQLVVGNRWCEIAKLLPGRTENAVKNRWNSSARKRWLQEN 306
BLAST of mRNA_F-serratus_M_contig139.2813.1 vs. uniprot
Match: A0A836C844_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C844_9STRA) HSP 1 Score: 259 bits (663), Expect = 1.350e-76 Identity = 113/155 (72.90%), Postives = 130/155 (83.87%), Query Frame = 3
Query: 687 GKWTKEEDTRLREIVEHHGARNWRMVAEQLGTPRSDVQCLHRWNKVLRPGLHKGPWTEEEDNIVRECVEHSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAFMGNRWCEIAKLLPGRTENAVKNRFNSSARKK 1151
G W +ED RLR+ V+ HG R+WR +AE +G R+D+QCLHRWNKVLRPGLHKGPWTE ED +VRE VE G KVKWS VA++LPGRIGKQCRERWFNHLDP+IK+ W+PEED +VF AQ +GNRWCEIAKLLPGRTENAVKNRFNSSA+KK
Sbjct: 2 GTWAPDEDARLRDAVDRHGPRSWRAIAEDVGGARTDMQCLHRWNKVLRPGLHKGPWTETEDRVVRESVEAVGIAKVKWSAVAAKLPGRIGKQCRERWFNHLDPAIKRSPWTPEEDTVVFEAQLRLGNRWCEIAKLLPGRTENAVKNRFNSSAQKK 156
BLAST of mRNA_F-serratus_M_contig139.2813.1 vs. uniprot
Match: A0A835YLN0_9STRA (Homeodomain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLN0_9STRA) HSP 1 Score: 263 bits (671), Expect = 1.120e-75 Identity = 116/185 (62.70%), Postives = 143/185 (77.30%), Query Frame = 3
Query: 693 WTKEEDTRLREIVEHHGARNWRMVAEQLGT-------PRSDVQCLHRWNKVLRPGLHKGPWTEEEDNIVRECVEHSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAFMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQNPGGPNQ-LTPDLLAKLKEAH 1223
WT EED RLR +V+ HG+RNW++VA++L PR+DVQCL+RW K LRPGLHKG WTE ED +VRE VE G KVKWS +A+RLPGRIGKQCRERWFNHLDP++K+ W+PEED ++F AQA +GNRWCEIAKLLPGRTENAVKNRFNSSA+KKW+ +N + +T LL ++ +
Sbjct: 36 WTSEEDARLRAVVDKHGSRNWKLVADELAQAQPHAQPPRTDVQCLNRWKKTLRPGLHKGAWTEAEDRVVRESVEECGIAKVKWSTIAARLPGRIGKQCRERWFNHLDPALKRSTWTPEEDTVIFEAQARLGNRWCEIAKLLPGRTENAVKNRFNSSAQKKWVSKNGAATGEGITQQLLDAVQRVY 220
BLAST of mRNA_F-serratus_M_contig139.2813.1 vs. uniprot
Match: F0Y9B4_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9B4_AURAN) HSP 1 Score: 253 bits (645), Expect = 3.670e-74 Identity = 113/154 (73.38%), Postives = 129/154 (83.77%), Query Frame = 3
Query: 690 KWTKEEDTRLREIVEHHGARNWRMVAEQLGTPRSDVQCLHRWNKVLRPGLHKGPWTEEEDNIVRECVEHSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAFMGNRWCEIAKLLPGRTENAVKNRFNSSARKK 1151
KWT+EED RLREIVE GA+NW+ +A LG RSDVQCLHRWNKVLRPGL KGPWT +ED IV++ V GA +KWSV+A++LPGRIGKQCRERWFNHLDP IKKG+W+PEED I+F Q GNRW EIAKLLPGRTENAVKNR+NSSARK+
Sbjct: 1 KWTEEEDNRLREIVETFGAKNWKRLAMLLGNVRSDVQCLHRWNKVLRPGLSKGPWTADEDKIVKDMVLRHGAGNIKWSVIAAQLPGRIGKQCRERWFNHLDPEIKKGDWTPEEDNILFETQRVHGNRWSEIAKLLPGRTENAVKNRWNSSARKR 154
BLAST of mRNA_F-serratus_M_contig139.2813.1 vs. uniprot
Match: A0A7S1GEG8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GEG8_9STRA) HSP 1 Score: 254 bits (649), Expect = 6.050e-74 Identity = 114/184 (61.96%), Postives = 141/184 (76.63%), Query Frame = 3
Query: 684 GGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTPRSDVQCLHRWNKVLRPGLHKGPWTEEEDNIVRECVEHSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAFMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQNPGGPNQ--LTPDLLAKLKEAHAQ 1229
GG WT ED LR VE HG RNW+ +AE LG R+DVQCLHRWNKVL+PGL KGPW +EED++VR+ V G +V+WSV+AS+LPGRIGKQCRERWFNHLDP+IKKG W EED ++F AQ +GN+WCEIA++LPGRTENAVKNR+NSSAR++W + Q P L+ ++KEA A+
Sbjct: 11 GGNWTAAEDAELRVAVEAHGGRNWKRIAETLGHGRTDVQCLHRWNKVLKPGLVKGPWLKEEDDVVRDMVMKYGVGQVRWSVIASKLPGRIGKQCRERWFNHLDPAIKKGGWMEEEDLLIFQAQREVGNKWCEIARMLPGRTENAVKNRWNSSARRRWFKETGSKMEQDARVPMLVEEIKEAEAK 194
BLAST of mRNA_F-serratus_M_contig139.2813.1 vs. uniprot
Match: A0A8J2X3E5_9STRA (Hypothetical protein n=4 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X3E5_9STRA) HSP 1 Score: 264 bits (674), Expect = 1.010e-72 Identity = 117/160 (73.12%), Postives = 134/160 (83.75%), Query Frame = 3
Query: 678 PKGGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTPRSDVQCLHRWNKVLRPGLHKGPWTEEEDNIVRECVEHSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAFMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWL 1157
P GGKWT+EED RLREIVE GA+NW+ +A LGT RSDVQCLHRWNKVLRPGL KGPWT ED +VR+ V GA +KWSV+A++LPGRIGKQCRERWFNHLDP IKKG+W+P+ED ++F Q GNRW EIAKLLPGRTENAVKNR+NSSARK+WL
Sbjct: 93 PVGGKWTEEEDRRLREIVETFGAKNWKRLAMLLGTVRSDVQCLHRWNKVLRPGLSKGPWTAAEDRVVRDMVLRHGAGNIKWSVIAAQLPGRIGKQCRERWFNHLDPDIKKGDWTPDEDAVLFETQRVHGNRWSEIAKLLPGRTENAVKNRWNSSARKRWL 252
BLAST of mRNA_F-serratus_M_contig139.2813.1 vs. uniprot
Match: A0A6U4HUA2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4HUA2_9STRA) HSP 1 Score: 263 bits (673), Expect = 8.600e-72 Identity = 135/238 (56.72%), Postives = 158/238 (66.39%), Query Frame = 3
Query: 612 EWLVSLME-RSKAAGAKGGRSKGPK----GGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTPRSDVQCLHRWNKVLRPGLHKGPWTEEEDNIVRECVEHSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAFMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWL-DQNPGGPNQ--------------LTPDLLAKLKEAHAQMLNHPTSGSTQG 1265
+W +++ RS+ A K G P+ GGKW+KEED RL+ IV+ HGA+NW+ +AE LG RSDVQCLHRWNKVL+PGLHKGPW ED +VR+ V G KVKWS +A+ LPGRIGKQCRERWFNHLDPSI K W+ EED I+F AQ GNRWCEIAKLLPGRTEN VKNR+NSSARKKW D+ G N L PDL A +K A N G +QG
Sbjct: 212 QWQKRILQLRSQLANTKKGVRLKPRKPSQGGKWSKEEDARLKGIVQEHGAKNWKKIAELLGHTRSDVQCLHRWNKVLKPGLHKGPWQAAEDEVVRDMVIRHGVGKVKWSDIAALLPGRIGKQCRERWFNHLDPSISKAPWTEEEDTIIFEAQQIFGNRWCEIAKLLPGRTENMVKNRWNSSARKKWFADRKAEGGNLAKMLATRSDANLTGLPPDLAAAVKAARQTATN----GGSQG 445
BLAST of mRNA_F-serratus_M_contig139.2813.1 vs. uniprot
Match: A0A7S3HPT5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HPT5_9STRA) HSP 1 Score: 248 bits (634), Expect = 1.010e-68 Identity = 108/160 (67.50%), Postives = 130/160 (81.25%), Query Frame = 3
Query: 684 GGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTPRSDVQCLHRWNKVLRPGLHKGPWTEEEDNIVRECVEHSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAFMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQ 1163
GGKW+ EEDT L+EIV+ HGA++W+ VA LG R+DVQCLHRWNKVLRPGL KG W++EED IVR V G KV+WS +A +LPGRIGKQCRERWFNHLDP+IKKG+W+ +E+ I++ AQ GNRWCEI+KLLPGRTENAVKNR+NS KKWL +
Sbjct: 72 GGKWSTEEDTLLKEIVQVHGAKSWKKVAGLLGKTRTDVQCLHRWNKVLRPGLQKGAWSKEEDQIVRNMVAQVGVVKVRWSTIAEQLPGRIGKQCRERWFNHLDPTIKKGDWTRDEEIIIYEAQRHFGNRWCEISKLLPGRTENAVKNRWNSCTMKKWLKE 231 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig139.2813.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig139.2813.1 >prot_F-serratus_M_contig139.2813.1 ID=prot_F-serratus_M_contig139.2813.1|Name=mRNA_F-serratus_M_contig139.2813.1|organism=Fucus serratus male|type=polypeptide|length=1035bp METRDMKGPGVPLSKGSATLPSPRNPPEKRTSEGTTASGQIAPDILRPPAback to top mRNA from alignment at F-serratus_M_contig139:521299..558752+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig139.2813.1 ID=mRNA_F-serratus_M_contig139.2813.1|Name=mRNA_F-serratus_M_contig139.2813.1|organism=Fucus serratus male|type=mRNA|length=37454bp|location=Sequence derived from alignment at F-serratus_M_contig139:521299..558752+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig139:521299..558752+ >mRNA_F-serratus_M_contig139.2813.1 ID=mRNA_F-serratus_M_contig139.2813.1|Name=mRNA_F-serratus_M_contig139.2813.1|organism=Fucus serratus male|type=CDS|length=6210bp|location=Sequence derived from alignment at F-serratus_M_contig139:521299..558752+ (Fucus serratus male)back to top |