prot_F-serratus_M_contig1385.2779.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1385.2779.1
Unique Nameprot_F-serratus_M_contig1385.2779.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length121
Homology
BLAST of mRNA_F-serratus_M_contig1385.2779.1 vs. uniprot
Match: A0A0U1WNN7_SARFS (NADH-ubiquinone oxidoreductase chain 3 n=22 Tax=Sargassaceae TaxID=3014 RepID=A0A0U1WNN7_SARFS)

HSP 1 Score: 227 bits (578), Expect = 4.510e-75
Identity = 108/120 (90.00%), Postives = 118/120 (98.33%), Query Frame = 0
Query:    1 MFFLKEYYPALIYLCFSLLLASVIFGASYTLAMSEADSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWAASLSQLPAIGYWSMIDFLFELVIGFIYAWQIGSLDWE 120
            MFFL+EY PALIYLCFSL+LASVIFGASYTLA++E+D+EKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVF+FPWAASLSQLP +GYWS+IDFLFELV+GFIYAWQIGSLDWE
Sbjct:    1 MFFLREYSPALIYLCFSLILASVIFGASYTLALAESDNEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFIFPWAASLSQLPPVGYWSVIDFLFELVVGFIYAWQIGSLDWE 120          
BLAST of mRNA_F-serratus_M_contig1385.2779.1 vs. uniprot
Match: A0A0U1XDC4_9PHAE (NADH-ubiquinone oxidoreductase chain 3 n=66 Tax=Phaeophyceae TaxID=2870 RepID=A0A0U1XDC4_9PHAE)

HSP 1 Score: 221 bits (563), Expect = 8.750e-73
Identity = 106/120 (88.33%), Postives = 116/120 (96.67%), Query Frame = 0
Query:    1 MFFLKEYYPALIYLCFSLLLASVIFGASYTLAMSEADSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWAASLSQLPAIGYWSMIDFLFELVIGFIYAWQIGSLDWE 120
            MFFLKEYYPALI+L FSL LA++IFGASY LA+S++DSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIET+FLFPWA SLSQLP+IGYWSM+DFLFELV+GFIYAWQIGSLDWE
Sbjct:    1 MFFLKEYYPALIFLGFSLFLAALIFGASYILAISDSDSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPWAVSLSQLPSIGYWSMMDFLFELVVGFIYAWQIGSLDWE 120          
BLAST of mRNA_F-serratus_M_contig1385.2779.1 vs. uniprot
Match: Q94YZ1_PYLLI (NADH-ubiquinone oxidoreductase chain 3 n=3 Tax=Ectocarpales TaxID=2877 RepID=Q94YZ1_PYLLI)

HSP 1 Score: 219 bits (559), Expect = 3.560e-72
Identity = 105/120 (87.50%), Postives = 114/120 (95.00%), Query Frame = 0
Query:    1 MFFLKEYYPALIYLCFSLLLASVIFGASYTLAMSEADSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWAASLSQLPAIGYWSMIDFLFELVIGFIYAWQIGSLDWE 120
            MF LKEYYPALI+L FS +LA++IFGASY LA+S ADSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIET+FLFPWA SLSQLP+IGYWSM+DFLFELV+GFIYAWQIGSLDWE
Sbjct:    1 MFLLKEYYPALIFLVFSFVLAAIIFGASYILAVSSADSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPWAVSLSQLPSIGYWSMMDFLFELVVGFIYAWQIGSLDWE 120          
BLAST of mRNA_F-serratus_M_contig1385.2779.1 vs. uniprot
Match: E6ZET4_ECTSI (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=E6ZET4_ECTSI)

HSP 1 Score: 218 bits (554), Expect = 2.060e-71
Identity = 104/120 (86.67%), Postives = 114/120 (95.00%), Query Frame = 0
Query:    1 MFFLKEYYPALIYLCFSLLLASVIFGASYTLAMSEADSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWAASLSQLPAIGYWSMIDFLFELVIGFIYAWQIGSLDWE 120
            MFFLKEYYP LI+L FSL LA VIFGAS+ LA+S+AD+EKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIET+FLFPW+ SLSQLP+IGYWSM+DFLFELV+GFIYAWQIGSLDWE
Sbjct:    1 MFFLKEYYPVLIFLGFSLALAGVIFGASFILAVSDADTEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPWSVSLSQLPSIGYWSMLDFLFELVVGFIYAWQIGSLDWE 120          
BLAST of mRNA_F-serratus_M_contig1385.2779.1 vs. uniprot
Match: A0A4Y5T7V9_9PHAE (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A4Y5T7V9_9PHAE)

HSP 1 Score: 204 bits (518), Expect = 6.370e-66
Identity = 97/120 (80.83%), Postives = 110/120 (91.67%), Query Frame = 0
Query:    1 MFFLKEYYPALIYLCFSLLLASVIFGASYTLAMSEADSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWAASLSQLPAIGYWSMIDFLFELVIGFIYAWQIGSLDWE 120
            MF+L EYY  LI+L  S+LLA +IFGASY LA+S +DSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVF+FPWA SLSQ+P+IGYWSM+DFLFELV+GFIYAW+IGSL+W 
Sbjct:    1 MFYLHEYYSILIFLVISVLLAFIIFGASYLLALSNSDSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFVFPWAISLSQMPSIGYWSMMDFLFELVVGFIYAWKIGSLEWS 120          
BLAST of mRNA_F-serratus_M_contig1385.2779.1 vs. uniprot
Match: Q2TU99_DICDH (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Dictyota dichotoma TaxID=2876 RepID=Q2TU99_DICDH)

HSP 1 Score: 203 bits (517), Expect = 8.760e-66
Identity = 95/119 (79.83%), Postives = 109/119 (91.60%), Query Frame = 0
Query:    1 MFFLKEYYPALIYLCFSLLLASVIFGASYTLAMSEADSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWAASLSQLPAIGYWSMIDFLFELVIGFIYAWQIGSLDW 119
            MF+L EYYP L++   S+LLA +IFG SY LA S+ADSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVF+FPWA SLSQLP++GYWSM+DFLFEL++GFIYAW+IGSL+W
Sbjct:    1 MFYLHEYYPVLLFFLISILLAFLIFGLSYILAFSKADSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFVFPWAVSLSQLPSVGYWSMMDFLFELIVGFIYAWKIGSLEW 119          
BLAST of mRNA_F-serratus_M_contig1385.2779.1 vs. uniprot
Match: A0A8E8U4L6_9PHAE (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E8U4L6_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 1.500e-64
Identity = 92/117 (78.63%), Postives = 107/117 (91.45%), Query Frame = 0
Query:    4 LKEYYPALIYLCFSLLLASVIFGASYTLAMSEADSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWAASLSQLPAIGYWSMIDFLFELVIGFIYAWQIGSLDWE 120
            L EYYP L+++ FSL L+ +IFGASYT +++E D+EK+SSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPW  +LS+LPA+GYWSM+DF+ ELVIGFIYAWQIGSLDWE
Sbjct:    4 LPEYYPILLFITFSLFLSLLIFGASYTFSIAEPDNEKVSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWVVTLSELPAVGYWSMVDFIIELVIGFIYAWQIGSLDWE 120          
BLAST of mRNA_F-serratus_M_contig1385.2779.1 vs. uniprot
Match: A0A8F0K0X7_9PHAE (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0K0X7_9PHAE)

HSP 1 Score: 196 bits (498), Expect = 6.910e-63
Identity = 92/119 (77.31%), Postives = 105/119 (88.24%), Query Frame = 0
Query:    1 MFFLKEYYPALIYLCFSLLLASVIFGASYTLAMSEADSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWAASLSQLPAIGYWSMIDFLFELVIGFIYAWQIGSLDW 119
            MF   EYYP L++L    +LA +IFGASY L  S+AD+EKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIET+FLFPWA +LSQLP++GYWSM+DFL ELV+GFIYAWQIGSL+W
Sbjct:    1 MFCFHEYYPVLLFLVVGFILAVIIFGASYFLVFSKADNEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPWAITLSQLPSLGYWSMMDFLLELVVGFIYAWQIGSLEW 119          
BLAST of mRNA_F-serratus_M_contig1385.2779.1 vs. uniprot
Match: A0A7S6UA31_9STRA (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6UA31_9STRA)

HSP 1 Score: 181 bits (459), Expect = 6.920e-57
Identity = 85/117 (72.65%), Postives = 101/117 (86.32%), Query Frame = 0
Query:    5 KEYYPALIYLCFSLLLASVIFGASYTLAMSEADSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWAASLSQLP-AIGYWSMIDFLFELVIGFIYAWQIGSLDWE 120
            +EYYP L++   S+ LA +IFGASY LA+++ D+EKLSSYECGFDPYEDARNAFDVRFYLVAILFL+FD+E VFLFPWA  L Q   ++G WSMIDFLFEL++GF+YAWQIGSLDWE
Sbjct:    7 QEYYPILVFTFLSIGLAGLIFGASYALALAKPDTEKLSSYECGFDPYEDARNAFDVRFYLVAILFLIFDLEAVFLFPWAVGLGQQSTSLGLWSMIDFLFELLVGFVYAWQIGSLDWE 123          
BLAST of mRNA_F-serratus_M_contig1385.2779.1 vs. uniprot
Match: A0A0K2RWM0_9STRA (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Triparma laevis TaxID=1534972 RepID=A0A0K2RWM0_9STRA)

HSP 1 Score: 175 bits (444), Expect = 1.330e-54
Identity = 77/118 (65.25%), Postives = 102/118 (86.44%), Query Frame = 0
Query:    3 FLKEYYPALIYLCFSLLLASVIFGASYTLAMSEADSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWAASLSQLPAIGYWSMIDFLFELVIGFIYAWQIGSLDWE 120
            F +EYYP L++L  +++L++VI GASY LA+   D+EKLS+YECGFDPYEDAR+ FDVRFYLVAILF++FDIE +FLFPWA SL Q+ ++G+WSM+DF+ EL +GFIYAW+IG+L+WE
Sbjct:    6 FRQEYYPILLFLSVAIILSAVILGASYLLAVQNPDTEKLSAYECGFDPYEDARHTFDVRFYLVAILFIIFDIEAMFLFPWAVSLDQIGSLGFWSMVDFILELGVGFIYAWKIGALEWE 123          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1385.2779.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0U1WNN7_SARFS4.510e-7590.00NADH-ubiquinone oxidoreductase chain 3 n=22 Tax=Sa... [more]
A0A0U1XDC4_9PHAE8.750e-7388.33NADH-ubiquinone oxidoreductase chain 3 n=66 Tax=Ph... [more]
Q94YZ1_PYLLI3.560e-7287.50NADH-ubiquinone oxidoreductase chain 3 n=3 Tax=Ect... [more]
E6ZET4_ECTSI2.060e-7186.67NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Ect... [more]
A0A4Y5T7V9_9PHAE6.370e-6680.83NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Dic... [more]
Q2TU99_DICDH8.760e-6679.83NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Dic... [more]
A0A8E8U4L6_9PHAE1.500e-6478.63NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Pha... [more]
A0A8F0K0X7_9PHAE6.910e-6377.31NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Pro... [more]
A0A7S6UA31_9STRA6.920e-5772.65NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Sch... [more]
A0A0K2RWM0_9STRA1.330e-5465.25NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Tri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038430NADH:ubiquinone oxidoreductase, subunit 3 superfamilyGENE3D1.20.58.1610coord: 2..120
e-value: 1.6E-37
score: 130.2
IPR000440NADH:ubiquinone/plastoquinone oxidoreductase, chain 3PFAMPF00507Oxidored_q4coord: 23..119
e-value: 8.4E-34
score: 115.7
IPR000440NADH:ubiquinone/plastoquinone oxidoreductase, chain 3PANTHERPTHR11058NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 3coord: 4..120
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 81..91
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 60..80
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 92..112
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..59
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 113..120
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 62..84
NoneNo IPR availableTMHMMTMhelixcoord: 94..116
IPR023043NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastidHAMAPMF_01394NDH1_NuoAcoord: 3..120
score: 17.445

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1385contigF-serratus_M_contig1385:10439..10801 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1385.2779.1mRNA_F-serratus_M_contig1385.2779.1Fucus serratus malemRNAF-serratus_M_contig1385 10439..10801 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1385.2779.1 ID=prot_F-serratus_M_contig1385.2779.1|Name=mRNA_F-serratus_M_contig1385.2779.1|organism=Fucus serratus male|type=polypeptide|length=121bp
MFFLKEYYPALIYLCFSLLLASVIFGASYTLAMSEADSEKLSSYECGFDP
YEDARNAFDVRFYLVAILFLLFDIETVFLFPWAASLSQLPAIGYWSMIDF
LFELVIGFIYAWQIGSLDWE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038430NDAH_ubi_oxred_su3_sf
IPR000440NADH_UbQ/plastoQ_OxRdtase_su3
IPR023043NAD(P)H_OxRDtase_bac/plastid