mRNA_F-serratus_M_contig137.2703.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig137.2703.1 vs. uniprot
Match: A0A836CIT0_9STRA (2',3'-cyclic-nucleotide 3'-phosphodiesterase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIT0_9STRA) HSP 1 Score: 122 bits (306), Expect = 1.730e-28 Identity = 68/179 (37.99%), Postives = 97/179 (54.19%), Query Frame = 1
Query: 7 GYSLWLIPKEPARSTFQGVIDRYRIEHSTVSFEPHVTLIAGVEPKGGEAEVLSKTEKLASELQAISARVERTACKDLYFQSVFALLRLDEALLEAHKAARAEFGQDASGANEYMPHVSLLYGDLPMPVREDIRQDAEPTVIG---------SEFELDHVQVWCTQGVVAEWKPVGTFSL 516
G+SLWL+P +PA Q V+ ++ + F+PH TL+AG+ P+ E EV+ KT LA + A ++R A K LYFQSVFAL++ + + H A FG GA YMPH+SL YGD+ R I+ DA+ + SE +D ++VW T+G V EW+ L
Sbjct: 9 GHSLWLLPAQPALDALQEVVMEISVKRHSPCFKPHCTLLAGL-PES-EEEVIRKTRDLALRVAATPMTIDRVATKQLYFQSVFALIKAKDEAMNLHATAVEAFGVPEGGA-PYMPHISLFYGDVDDKTRSAIKDDAQALLAARGMSLGSPESELSMDTIEVWNTEGPVEEWRRCAVVPL 184
BLAST of mRNA_F-serratus_M_contig137.2703.1 vs. uniprot
Match: A0A8K1CKY3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKY3_PYTOL) HSP 1 Score: 118 bits (296), Expect = 3.950e-27 Identity = 67/172 (38.95%), Postives = 99/172 (57.56%), Query Frame = 1
Query: 7 GYSLWLIPKEPARSTFQGVIDRYRIEHSTVSFEPHVTLIAGVEPKGGEAEVLSKTEKLASELQAISARVERTACKDL-YFQSVFALLRLDEALLEAHKAARAEFGQDASGANEYMPHVSLLYGDLPMPVREDIRQDAEPTVIGSEFELDHVQVWCTQGVVAEWKPVGTFSLQ 519
GYSLWL+P A QGVID T SF PH+TL+ G+ E EV+ KT+ +A L+ + +V + K+L YFQ VFALL++ AL AH+ A+ + + +MPHVSL+YGDL R + Q+ P G++ +++ +Q+W T G V +WK V +L+
Sbjct: 19 GYSLWLVPHAAAERELQGVIDELATRLETPSFLPHMTLLGGIMGLQ-EEEVVRKTQLVADGLETLDLQVSAVSSKELLYFQCVFALLKMTPALENAHEHAKQVY--ERLEEPSFMPHVSLVYGDLSTEDRRALAQEFGPRFDGTQMKMERLQLWNTTGPVKQWKLVKEIALR 187
BLAST of mRNA_F-serratus_M_contig137.2703.1 vs. uniprot
Match: K3WU85_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WU85_GLOUD) HSP 1 Score: 116 bits (291), Expect = 1.960e-26 Identity = 66/171 (38.60%), Postives = 94/171 (54.97%), Query Frame = 1
Query: 7 GYSLWLIPKEPARSTFQGVIDRYRIEHSTVSFEPHVTLIAGVEPKGGEAEVLSKTEKLASELQAISARVERTACKDL-YFQSVFALLRLDEALLEAHKAARAEFGQDASGANEYMPHVSLLYGDLPMPVREDIRQDAEPTVIGSEFELDHVQVWCTQGVVAEWKPVGTFSL 516
GYSLW++P+ A I T F PH+TL+ G+ E + ++KT ++A + A+SA+V K+L YFQ VFALL L L AH AA+ FG+ E+MPH+SL+YGDL ++ + + P G +LDH+Q+W T G VA W+ V F L
Sbjct: 22 GYSLWVVPRADAGRELADAISECAARLQTPPFLPHMTLLGGIVGIQ-EEDAVAKTAQVADAIHALSAKVCAVTSKELLYFQCVFALLELTNELSSAHLAAKQTFGRFQD--TEFMPHISLVYGDLTREQKQQLIAELGPRFDGMRVQLDHLQLWNTSGPVANWQLVREFQL 189
BLAST of mRNA_F-serratus_M_contig137.2703.1 vs. uniprot
Match: A0A7S2USI1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USI1_9STRA) HSP 1 Score: 113 bits (283), Expect = 3.830e-26 Identity = 53/123 (43.09%), Postives = 77/123 (62.60%), Query Frame = 1
Query: 148 EAEVLSKTEKLASELQAISARVERTACKDLYFQSVFALLRLDEALLEAHKAARAEFGQDASGANEYMPHVSLLYGDLPMPVREDIRQDAEPTVIGSEFELDHVQVWCTQGVVAEWKPVGTFSL 516
++EV KT LA ++ A VE CKDL+FQSVFA+L+ D LLEA++ AR FG + Y PH+SL YGD+PM R +I+++ EP + G F D +++W T+G + +W V +F L
Sbjct: 2 DSEVADKTRALAESIRPFHATVESVGCKDLFFQSVFAVLQKDPELLEANQKAREVFG--CEDQDPYFPHISLFYGDIPMDQRAEIKKEMEPDIAGFSFPFDSIELWSTEGEIKDWYKVESFPL 122
BLAST of mRNA_F-serratus_M_contig137.2703.1 vs. uniprot
Match: W2QZL2_PHYPN (Uncharacterized protein n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QZL2_PHYPN) HSP 1 Score: 115 bits (287), Expect = 5.240e-26 Identity = 61/174 (35.06%), Postives = 96/174 (55.17%), Query Frame = 1
Query: 1 MAGYSLWLIPKEPARSTFQGVIDRYRIEHSTVSFEPHVTLIAGVEPKGGEAEVLSKTEKLASELQAISARVERTACKD-LYFQSVFALLRLDEALLEAHKAARAEFGQDASGANEYMPHVSLLYGDLPMPVREDIRQDAEPTVIGSEFELDHVQVWCTQGVVAEWKPVGTFSLQ 519
+AG+S+W +P +PA + VI+ Y F PH+T+++GV+ E EV K +LA +Q + ++ KD LYFQ VF LL+L LL AH A+ + + ++MPHVS +YGDL R D+ ++ +P + G +++ +QVW T G V W+ V L+
Sbjct: 8 VAGFSIWAVPGQPAAQELEDVIETYADRLQMPPFLPHMTVLSGVKGLSAE-EVTVKLSELADSMQVLDVEIQTVTFKDELYFQCVFGLLKLTSELLRAHGCAKEIYATERK--EDFMPHVSFIYGDLAGETRADLAKELQPQLDGRRLKMEKLQVWRTVGPVEMWELVAEQPLR 178
BLAST of mRNA_F-serratus_M_contig137.2703.1 vs. uniprot
Match: A0A6A4C6D8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4C6D8_9STRA) HSP 1 Score: 114 bits (286), Expect = 7.780e-26 Identity = 63/175 (36.00%), Postives = 101/175 (57.71%), Query Frame = 1
Query: 1 MAGYSLWLIPKEPARSTFQGVIDRYRIEHSTVSFEPHVTLIAGVEPKGGEA-EVLSKTEKLASELQAISARVERTACKD-LYFQSVFALLRLDEALLEAHKAARAEFGQDASGANEYMPHVSLLYGDLPMPVREDIRQDAEPTVIGSEFELDHVQVWCTQGVVAEWKPVGTFSLQ 519
+AG+S+W +P+ A GVI Y +T F PH+T+++GV KG +A E +K +L +EL+ + VE KD LYFQ VF LL L L+ AH+ A+ + + S +E+MPHVS +YGDL R ++ ++ P++ G +++ +Q+W T G V W+ V ++
Sbjct: 11 VAGFSVWAVPEPAAAEELGGVIKTYATRLNTPPFLPHMTVVSGV--KGLQAGEAAAKLSQLGNELRVLDVEVETVTFKDELYFQCVFGLLTLTRELVHAHRRAKEIYAVERS--DEFMPHVSFVYGDLANAERAELAKELRPSLAGRRLKMEKLQLWRTIGPVEMWELVAEAKMR 181
BLAST of mRNA_F-serratus_M_contig137.2703.1 vs. uniprot
Match: D8LH76_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH76_ECTSI) HSP 1 Score: 106 bits (265), Expect = 5.000e-24 Identity = 52/91 (57.14%), Postives = 63/91 (69.23%), Query Frame = 1
Query: 250 VFALLRLDEALLEAHKAARAEFGQDASGANEYMPHVSLLYGDLPMPVREDIRQDAEPTVI--GSEFELDHVQVWCTQGVVAEWKPVGTFSL 516
VFALL D ALL+AHK AR FGQD S +++MPH SLLYGDLPM RE IRQ+A ++ G E + +QVW T GVVAEWKP+ T +
Sbjct: 6 VFALLERDPALLDAHKVAREAFGQDPSDGSDFMPHASLLYGDLPMSTREAIRQEAGVGLVDPGITLEFESIQVWSTIGVVAEWKPLATLPI 96
BLAST of mRNA_F-serratus_M_contig137.2703.1 vs. uniprot
Match: A0A522PYF8_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A522PYF8_9BACT) HSP 1 Score: 107 bits (267), Expect = 2.460e-23 Identity = 59/171 (34.50%), Postives = 95/171 (55.56%), Query Frame = 1
Query: 7 GYSLWLIPKEPARSTFQGVIDRYRIEHSTVSFEPHVTLIAGVEPKGGEAEVLSKTEKLASELQAISARVERTACKDLYFQSVFALLRLDEALLEAHKAARAEFGQDASGANEYMPHVSLLYGDLPMPVREDIRQDAEPTVIGSEFELDHVQVWCTQGVVAEWKPVGTFSLQ 519
GYSLWL+P EPA S GVI R +HS FEPH+TL+ G+ + +A ++K + LA L+ + + D YF+ +F + +L A +AA F + + +MPHVSLLYG LP+ ++ +I ++ G F++ + ++ G V +WK + TF+L+
Sbjct: 11 GYSLWLVPSEPAHSLLAGVISRLGRDHSAPRFEPHITLLGGIALQDRKA--MAKLDSLARILEPVKVELGEIGFLDEYFRCLFVTVIAGSSLSSARRAACRVFARQNT---PFMPHVSLLYGKLPVEMKHEIAAGLN-SLSGQTFQVRRLALYKVSGSVHQWKCIKTFTLK 175
BLAST of mRNA_F-serratus_M_contig137.2703.1 vs. uniprot
Match: A0A5D6XK14_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XK14_9STRA) HSP 1 Score: 105 bits (262), Expect = 1.110e-22 Identity = 62/170 (36.47%), Postives = 92/170 (54.12%), Query Frame = 1
Query: 10 YSLWLIPKEPARSTFQGVIDRYRIEHSTVSFEPHVTLIAGVEPKGGEAEVLSKTEKLASELQAISARVERTACKDLYFQSVFALLRLDEALLEAHKAARAEFGQDASGANEYMPHVSLLYGDLPMPVREDIRQDAEPTVIGSE-FELDHVQVWCTQGVVAEWKPVGTFSL 516
YSLW P+ A +I T SF PH+TL+ G+ EA+ + KT++LA + ++ + + A KDLYFQ VF LL+L + L +A++AA+ QD E+MPH+SL+YG+L +E++ P S +LD +Q+W T G V W V F L
Sbjct: 9 YSLWAAPEPQAERGIAEMIHASAQRLQTPSFLPHMTLLGGISGVN-EADAVEKTKQLAEAMHVLAPEIRKVASKDLYFQCVFLLLQLSDELADAYRAAK----QDNV---EFMPHISLVYGELNEATKEEVVAALNPHFDSSAPVKLDRLQLWNTTGAVGAWTLVAEFGL 170
BLAST of mRNA_F-serratus_M_contig137.2703.1 vs. uniprot
Match: A0A329T316_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329T316_9STRA) HSP 1 Score: 103 bits (257), Expect = 1.000e-19 Identity = 56/168 (33.33%), Postives = 89/168 (52.98%), Query Frame = 1
Query: 19 WLIPKEPARSTFQGVIDRYRIEHSTVSFEPHVTLIAGVEPKGGEAEVLSKTEKLASELQAISARVERTACKD-LYFQSVFALLRLDEALLEAHKAARAEFGQDASGANEYMPHVSLLYGDLPMPVREDIRQDAEPTVIGSEFELDHVQVWCTQGVVAEWKPVGTFSLQ 519
W +P +P+ + VI Y T F PH+T+++GV+ E EV K +LA + + ++ KD LYFQ VF LL+L L +AH A+ + + E+MPHVS +YGDL R ++ ++ +P + G ++D +Q+W T G V W+ V L+
Sbjct: 331 WAVPGKPSAQELEDVIKTYAERLQTPPFLPHMTVLSGVKALSAE-EVTVKLSELADSMHVLDVEIQTLTFKDELYFQCVFGLLKLTSELRQAHGRAKEVYAVERK--EEFMPHVSFIYGDLASEARAELAKELQPQLDGRLQKMDKLQLWRTLGPVESWELVAELPLR 495 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig137.2703.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig137.2703.1 >prot_F-serratus_M_contig137.2703.1 ID=prot_F-serratus_M_contig137.2703.1|Name=mRNA_F-serratus_M_contig137.2703.1|organism=Fucus serratus male|type=polypeptide|length=176bp MAGYSLWLIPKEPARSTFQGVIDRYRIEHSTVSFEPHVTLIAGVEPKGGEback to top mRNA from alignment at F-serratus_M_contig137:138245..140859+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig137.2703.1 ID=mRNA_F-serratus_M_contig137.2703.1|Name=mRNA_F-serratus_M_contig137.2703.1|organism=Fucus serratus male|type=mRNA|length=2615bp|location=Sequence derived from alignment at F-serratus_M_contig137:138245..140859+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig137:138245..140859+ >mRNA_F-serratus_M_contig137.2703.1 ID=mRNA_F-serratus_M_contig137.2703.1|Name=mRNA_F-serratus_M_contig137.2703.1|organism=Fucus serratus male|type=CDS|length=1056bp|location=Sequence derived from alignment at F-serratus_M_contig137:138245..140859+ (Fucus serratus male)back to top |