prot_F-serratus_M_contig1369.2693.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1369.2693.1
Unique Nameprot_F-serratus_M_contig1369.2693.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length171
Homology
BLAST of mRNA_F-serratus_M_contig1369.2693.1 vs. uniprot
Match: D7FVW1_ECTSI (Ribosomal RNA-processing protein 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVW1_ECTSI)

HSP 1 Score: 312 bits (800), Expect = 5.270e-105
Identity = 151/170 (88.82%), Postives = 162/170 (95.29%), Query Frame = 0
Query:    1 YHRGFREQVEKWPVHPLDIIIDWLGKYPKARVVDFGCGEARLAASVPNKVHSFDLVSPNSRVTACDMAHVPLKDASVHVAVFCLSLMGTNLADFLREANRVLVPGGLVKVAEVRSRFEGEEGGVERFLDVARKLGFDSKQMDRTNKMFLLAEFKKSNRRPQEGVAFEAKV 170
            YHRGFREQVEKWPVHPLDIIIDWL KYPKARV DFGCGEARLAA+VPNKVHSFDLVSPN  VTACDMA+VP+KDASVHVAVFCLSLMGTNLADFLREA+RVLVPGGLVKVAEVRSRFEGEEGGVERFL+V R+LGFD++QMDR+NKMFLLAEFKKS R+P+ GV FEAKV
Sbjct:   96 YHRGFREQVEKWPVHPLDIIIDWLKKYPKARVADFGCGEARLAATVPNKVHSFDLVSPNPLVTACDMANVPIKDASVHVAVFCLSLMGTNLADFLREAHRVLVPGGLVKVAEVRSRFEGEEGGVERFLEVTRRLGFDTRQMDRSNKMFLLAEFKKSGRKPERGVEFEAKV 265          
BLAST of mRNA_F-serratus_M_contig1369.2693.1 vs. uniprot
Match: A0A6H5KX03_9PHAE (Ribosomal RNA-processing protein 8 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX03_9PHAE)

HSP 1 Score: 312 bits (799), Expect = 3.880e-102
Identity = 149/171 (87.13%), Postives = 161/171 (94.15%), Query Frame = 0
Query:    1 YHRGFREQVEKWPVHPLDIIIDWLGKYPKARVVDFGCGEARLAASVPNKVHSFDLVSPNSRVTACDMAHVPLKDASVHVAVFCLSLMGTNLADFLREANRVLVPGGLVKVAEVRSRFEGEEGGVERFLDVARKLGFDSKQMDRTNKMFLLAEFKKSNRRPQEGVAFEAKVC 171
            YHRGFREQVEKWPVHPLDIIIDWL KYPKARV DFGCGEARLAA+VPNKVHSFDLVSPN  VTACDMA+VP+KDASVHVA+FCLSLMGTNLADFLREA+RVLVPGGLVKVAEVRSRFEGEEGGVERFL+V ++LGFD+ QMDR+NKMFLLAEFKKS R+P+ GV FEAK C
Sbjct:  354 YHRGFREQVEKWPVHPLDIIIDWLKKYPKARVADFGCGEARLAATVPNKVHSFDLVSPNPLVTACDMANVPIKDASVHVAIFCLSLMGTNLADFLREAHRVLVPGGLVKVAEVRSRFEGEEGGVERFLEVTKRLGFDTMQMDRSNKMFLLAEFKKSGRKPERGVEFEAKAC 524          
BLAST of mRNA_F-serratus_M_contig1369.2693.1 vs. uniprot
Match: A0A836C7W6_9STRA (Ribosomal RNA-processing protein 8 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7W6_9STRA)

HSP 1 Score: 268 bits (685), Expect = 5.030e-89
Identity = 126/171 (73.68%), Postives = 143/171 (83.63%), Query Frame = 0
Query:    1 YHRGFREQVEKWPVHPLDIIIDWLGKYPKARVVDFGCGEARLAASVPNKVHSFDLVSPNSRVTACDMAHVPLKDASVHVAVFCLSLMGTNLADFLREANRVLVPGGLVKVAEVRSRFEGEEGGVERFLDVARKLGFDSKQMDRTNKMFLLAEFKKSNRRPQEGVAFEAKVC 171
            YHRGFREQVEKWPVHPLD+II WL KYPKA + DFGCGEARLA +VPN+ HSFDL +PN+ VTACDMAHVPL DASVH+AVFCLSLMGTNLADF+REA RVL PGGLVKVAEVRSRFEG  GG+  FL V R+LGFD +Q D T+ MF++ EFKK++R P+  V F AK C
Sbjct:   46 YHRGFREQVEKWPVHPLDVIIRWLKKYPKAVIADFGCGEARLAQTVPNRCHSFDLCAPNAHVTACDMAHVPLPDASVHIAVFCLSLMGTNLADFVREARRVLKPGGLVKVAEVRSRFEGAPGGLNAFLGVMRRLGFDQRQCDNTSTMFVMMEFKKASRAPEADVEFTAKAC 216          
BLAST of mRNA_F-serratus_M_contig1369.2693.1 vs. uniprot
Match: A0A024G7I7_9STRA (Ribosomal RNA-processing protein 8 n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024G7I7_9STRA)

HSP 1 Score: 222 bits (566), Expect = 3.670e-70
Identity = 101/172 (58.72%), Postives = 135/172 (78.49%), Query Frame = 0
Query:    1 YHRGFREQVEKWPVHPLDIIIDWLGKYPKARVVDFGCGEARLAASVPNKVHSFDLVSPNSRVTACDMAHVPLKDASVHVAVFCLSLMGTNLADFLREANRVLVPGGLVKVAEVRSRFEGEE-GGVERFLDVARKLGFDSKQMDRTNKMFLLAEFKKSNRRPQEGVAFEAKVC 171
            YH+GFREQV KWP++PLDI ID++ K+P A V DFGCGEARLA SVPN+VHSFDLV+PN  V AC++AHVPL   S+ +A++CL+LMGT + ++LREA+RV+  GG++K+AEV+SRFE ++ GG++ F+   RKLGFD ++ D  NKMF+L EF+KSNR+    V  E K C
Sbjct:  101 YHQGFREQVTKWPINPLDIFIDYIKKHPNAVVADFGCGEARLAQSVPNRVHSFDLVAPNDHVVACNIAHVPLNSKSIDIAIYCLALMGTTIPEYLREAHRVMKAGGILKIAEVKSRFETKQLGGIQGFISQLRKLGFDYQEKDERNKMFVLLEFQKSNRKKDTNVRIELKAC 272          
BLAST of mRNA_F-serratus_M_contig1369.2693.1 vs. uniprot
Match: A0A0W8D147_PHYNI (Ribosomal RNA-processing protein 8 n=10 Tax=Phytophthora TaxID=4783 RepID=A0A0W8D147_PHYNI)

HSP 1 Score: 215 bits (548), Expect = 2.020e-67
Identity = 104/172 (60.47%), Postives = 130/172 (75.58%), Query Frame = 0
Query:    1 YHRGFREQVEKWPVHPLDIIIDWLGKYPKARVVDFGCGEARLAASVPNKVHSFDLVSPNSRVTACDMAHVPLKDASVHVAVFCLSLMGTNLADFLREANRVLVPGGLVKVAEVRSRFEGEE-GGVERFLDVARKLGFDSKQMDRTNKMFLLAEFKKSNRRPQEGVAFEAKVC 171
            YH+GFRE  +KWP +PLD  ID++ ++PKA V DFGCG+ARLA SVPNKVHSFDLVS    VTAC++A VPLKD+SV + V+CL+LMGT++ +++RE  RVL PGG++KVAEV+SRFE E  GG+E F+   RK+GFD K  D  NKMF+L EF KS RRPQ     E K C
Sbjct:  102 YHQGFREMADKWPTNPLDTFIDFVKRHPKAVVADFGCGDARLAESVPNKVHSFDLVSRKPIVTACNIADVPLKDSSVDIGVYCLALMGTSVREYVREVYRVLKPGGVLKVAEVKSRFESESLGGIEGFVQTLRKMGFDCKHKDERNKMFVLFEFVKSTRRPQNVGPIEFKAC 273          
BLAST of mRNA_F-serratus_M_contig1369.2693.1 vs. uniprot
Match: A0A6A3U140_9STRA (Ribosomal RNA-processing protein 8 n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3U140_9STRA)

HSP 1 Score: 215 bits (548), Expect = 2.490e-67
Identity = 102/172 (59.30%), Postives = 132/172 (76.74%), Query Frame = 0
Query:    1 YHRGFREQVEKWPVHPLDIIIDWLGKYPKARVVDFGCGEARLAASVPNKVHSFDLVSPNSRVTACDMAHVPLKDASVHVAVFCLSLMGTNLADFLREANRVLVPGGLVKVAEVRSRFEGEE-GGVERFLDVARKLGFDSKQMDRTNKMFLLAEFKKSNRRPQEGVAFEAKVC 171
            YH+GFRE  +KWP +PLD  ID++ ++PKA V DFGCG+ARLA SVPNKVHSFDLVS    VTAC++A VPLKD++V + V+CL+LMGT++ +++RE  RVL PGG++KVAEV+SRFE E  GG+E F+   RK+GFD K  D  NKMF+L EF KS+R+PQ+    E K C
Sbjct:  109 YHQGFREMADKWPTNPLDTFIDYVKRHPKAVVADFGCGDARLAESVPNKVHSFDLVSRKPHVTACNIADVPLKDSTVDIGVYCLALMGTSVREYVREVYRVLKPGGVLKVAEVKSRFESESLGGIEGFVQTLRKMGFDCKHKDERNKMFVLFEFVKSSRKPQKVDPIEFKAC 280          
BLAST of mRNA_F-serratus_M_contig1369.2693.1 vs. uniprot
Match: D0N5P9_PHYIT (Ribosomal RNA-processing protein 8 n=4 Tax=Phytophthora TaxID=4783 RepID=D0N5P9_PHYIT)

HSP 1 Score: 214 bits (544), Expect = 8.910e-67
Identity = 102/172 (59.30%), Postives = 130/172 (75.58%), Query Frame = 0
Query:    1 YHRGFREQVEKWPVHPLDIIIDWLGKYPKARVVDFGCGEARLAASVPNKVHSFDLVSPNSRVTACDMAHVPLKDASVHVAVFCLSLMGTNLADFLREANRVLVPGGLVKVAEVRSRFEGEE-GGVERFLDVARKLGFDSKQMDRTNKMFLLAEFKKSNRRPQEGVAFEAKVC 171
            YH+GFRE  +KWP +PLD  ID++ ++PKA V DFGCG+ARLA SVPNKVHSFDLVS    VTAC++A VPLKD+SV +AV+CL+LMGT++ +++RE  RVL PGG++KVAEV+SRFE E  GG++ F+   RK+GFD K  D  NKMF+L E  KS R+PQ     E K C
Sbjct:  105 YHQGFREMADKWPTNPLDTFIDYVKRHPKAVVADFGCGDARLAESVPNKVHSFDLVSRKPIVTACNIADVPLKDSSVDIAVYCLALMGTSVREYVREVYRVLKPGGVLKVAEVKSRFESESLGGIDGFVQTLRKMGFDCKHKDERNKMFVLFELVKSTRKPQNVAPIEFKAC 276          
BLAST of mRNA_F-serratus_M_contig1369.2693.1 vs. uniprot
Match: A0A3M6V8R3_9STRA (Ribosomal RNA-processing protein 8 n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V8R3_9STRA)

HSP 1 Score: 213 bits (541), Expect = 2.530e-66
Identity = 100/172 (58.14%), Postives = 131/172 (76.16%), Query Frame = 0
Query:    1 YHRGFREQVEKWPVHPLDIIIDWLGKYPKARVVDFGCGEARLAASVPNKVHSFDLVSPNSRVTACDMAHVPLKDASVHVAVFCLSLMGTNLADFLREANRVLVPGGLVKVAEVRSRFEGEE-GGVERFLDVARKLGFDSKQMDRTNKMFLLAEFKKSNRRPQEGVAFEAKVC 171
            YH+GFRE  +KWP +PLD  ID++ +YPKA V DFGCG+ARL+ SVPNKVHSFDLVS    VTAC++A VPLKD+SV + V+CL+LMGT++ +++RE +RVL PGG++ VAEV+SRFE E  GG++ F+   RK+GFD K  D  NKMF+L +F KS+R+PQ     E K C
Sbjct:  105 YHQGFREMADKWPTNPLDNFIDYVKRYPKAVVADFGCGDARLSESVPNKVHSFDLVSCKPHVTACNIADVPLKDSSVDIGVYCLALMGTSVREYIREVHRVLKPGGILMVAEVKSRFESETLGGIDGFVQTLRKMGFDCKHKDERNKMFVLFDFVKSSRKPQNVRPIEFKAC 276          
BLAST of mRNA_F-serratus_M_contig1369.2693.1 vs. uniprot
Match: A0A3R7KAK8_9STRA (Ribosomal RNA-processing protein 8 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KAK8_9STRA)

HSP 1 Score: 212 bits (540), Expect = 3.590e-66
Identity = 101/172 (58.72%), Postives = 130/172 (75.58%), Query Frame = 0
Query:    1 YHRGFREQVEKWPVHPLDIIIDWLGKYPKARVVDFGCGEARLAASVPNKVHSFDLVSPNSRVTACDMAHVPLKDASVHVAVFCLSLMGTNLADFLREANRVLVPGGLVKVAEVRSRFEGEE-GGVERFLDVARKLGFDSKQMDRTNKMFLLAEFKKSNRRPQEGVAFEAKVC 171
            YH+GFREQ +KWPV+PLD  ID++ ++PKA V DFGCG+ARLA SV NKVHSFDLVS    VTAC++A VPLKD+S  + V+CL+LMG N+ +++RE  RVL PGG++KVAEV+SRFE E  GG++ F++V  K+GFD K  D  NKMF+L EF KS R+ Q+    E K C
Sbjct:  105 YHQGFREQADKWPVNPLDTFIDYVKRHPKAVVADFGCGDARLAESVSNKVHSFDLVSRKPHVTACNIADVPLKDSSTDIGVYCLALMGKNVREYVREVYRVLKPGGVLKVAEVKSRFESESLGGIDGFVEVLHKMGFDCKNKDERNKMFVLFEFIKSTRKAQDAGPLELKAC 276          
BLAST of mRNA_F-serratus_M_contig1369.2693.1 vs. uniprot
Match: H3G5K6_PHYRM (Ribosomal RNA-processing protein 8 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5K6_PHYRM)

HSP 1 Score: 207 bits (528), Expect = 3.920e-65
Identity = 103/179 (57.54%), Postives = 130/179 (72.63%), Query Frame = 0
Query:    1 YHRGFREQVEKWPVHPLDIIIDW-------LGKYPKARVVDFGCGEARLAASVPNKVHSFDLVSPNSRVTACDMAHVPLKDASVHVAVFCLSLMGTNLADFLREANRVLVPGGLVKVAEVRSRFEGEE-GGVERFLDVARKLGFDSKQMDRTNKMFLLAEFKKSNRRPQEGVAFEAKVC 171
            YH+GFREQ +KWP +PLD  ID+       L ++PKA V DFGCG+ARLA SVPN VHSFDLVS    VTAC++A VPLKDASV + V+CL+LMGT++ +++RE  RVL PGG++KVAEV+SRFE E  GG+  F+ +  K+GFD K  D  NKMF+L EF KS+R+PQ     E K C
Sbjct:   40 YHQGFREQADKWPTNPLDTFIDYVKCVADALRRHPKAVVADFGCGDARLAESVPNTVHSFDLVSRKPHVTACNIADVPLKDASVDIGVYCLALMGTSIREYVREVYRVLKPGGVLKVAEVKSRFESESLGGIVGFVQILSKMGFDCKSKDERNKMFVLFEFVKSSRKPQNVRPVELKAC 218          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1369.2693.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVW1_ECTSI5.270e-10588.82Ribosomal RNA-processing protein 8 n=1 Tax=Ectocar... [more]
A0A6H5KX03_9PHAE3.880e-10287.13Ribosomal RNA-processing protein 8 n=1 Tax=Ectocar... [more]
A0A836C7W6_9STRA5.030e-8973.68Ribosomal RNA-processing protein 8 n=1 Tax=Tribone... [more]
A0A024G7I7_9STRA3.670e-7058.72Ribosomal RNA-processing protein 8 n=2 Tax=Albugo ... [more]
A0A0W8D147_PHYNI2.020e-6760.47Ribosomal RNA-processing protein 8 n=10 Tax=Phytop... [more]
A0A6A3U140_9STRA2.490e-6759.30Ribosomal RNA-processing protein 8 n=4 Tax=Phytoph... [more]
D0N5P9_PHYIT8.910e-6759.30Ribosomal RNA-processing protein 8 n=4 Tax=Phytoph... [more]
A0A3M6V8R3_9STRA2.530e-6658.14Ribosomal RNA-processing protein 8 n=2 Tax=Peronos... [more]
A0A3R7KAK8_9STRA3.590e-6658.72Ribosomal RNA-processing protein 8 n=3 Tax=Phytoph... [more]
H3G5K6_PHYRM3.920e-6557.54Ribosomal RNA-processing protein 8 n=1 Tax=Phytoph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007823Ribosomal RNA processing protein 8PFAMPF05148Methyltransf_8coord: 1..160
e-value: 1.5E-62
score: 211.4
IPR007823Ribosomal RNA processing protein 8PANTHERPTHR12787UNCHARACTERIZEDcoord: 1..161
NoneNo IPR availableGENE3D3.40.50.150coord: 15..170
e-value: 4.5E-49
score: 168.6
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 5..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1369contigF-serratus_M_contig1369:82669..83865 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1369.2693.1mRNA_F-serratus_M_contig1369.2693.1Fucus serratus malemRNAF-serratus_M_contig1369 82669..83865 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1369.2693.1 ID=prot_F-serratus_M_contig1369.2693.1|Name=mRNA_F-serratus_M_contig1369.2693.1|organism=Fucus serratus male|type=polypeptide|length=171bp
YHRGFREQVEKWPVHPLDIIIDWLGKYPKARVVDFGCGEARLAASVPNKV
HSFDLVSPNSRVTACDMAHVPLKDASVHVAVFCLSLMGTNLADFLREANR
VLVPGGLVKVAEVRSRFEGEEGGVERFLDVARKLGFDSKQMDRTNKMFLL
AEFKKSNRRPQEGVAFEAKVC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007823RRP8
IPR029063SAM-dependent_MTases