mRNA_F-serratus_M_contig134.2540.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig134.2540.1 vs. uniprot
Match: A0A6H5JIR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIR3_9PHAE) HSP 1 Score: 304 bits (778), Expect = 2.880e-95 Identity = 148/240 (61.67%), Postives = 184/240 (76.67%), Query Frame = 1
Query: 16 EELGDGTYTVVFDGTPYCCECFGVGIRFIGRDGKVCQRLLSLSMLAKSLDFRAVFGDVHNIPNMKFKLDSTCCRGFILDGCAANLKALDALLTHCANAVGILCMSYLFNNAGDKIKSNQIDKFSGALNTVMSHSANASDQWRAATKTLPPKTLFHRLASAFERNDVLVKAWQEIKTFIGVFSTGDEAKSAKVKLCREGLARVRPDDIHQEFVLQLEFALAVDLRVHPTRAMYLLEEEGML 735
EELGDGTYTV FDGTPY CECFG+GIRFIG DG++CQRLL LSMLA S+D++A+FG+++ + M++KL CRGF+LDGC+ NLKAL AL THCAN+VGI C S+L N +G++++S+QIDKF+GAL TV+SHS NA+DQWR AT T PPK HR SA+ERN++LV WQ++KTFI FS+ DE +S K CR LAR HQE LQ+EFA+AVDL H T YLLE +GML
Sbjct: 305 EELGDGTYTVCFDGTPYRCECFGIGIRFIGPDGQICQRLLGLSMLANSMDYKAIFGELNKVVFMEYKLRPERCRGFMLDGCSPNLKALVALTTHCANSVGIRCASHLLNLSGNQMESSQIDKFAGALQTVLSHSHNAADQWRKATGTTPPKAPNHRWGSAYERNNLLVTNWQQMKTFIDDFSSSDETRSRKADFCRRELARFGKHGYHQEVWLQIEFAVAVDLGKHLTNGTYLLEGDGML 544
BLAST of mRNA_F-serratus_M_contig134.2540.1 vs. uniprot
Match: A0A6H5KPH4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPH4_9PHAE) HSP 1 Score: 259 bits (662), Expect = 2.980e-83 Identity = 125/216 (57.87%), Postives = 157/216 (72.69%), Query Frame = 1
Query: 1 LQKILEELGDGTYTVVFDGTPYCCECFGVGIRFIGRDGKVCQRLLSLSMLAKSLDFRAVFGDVHNIPNMKFKLDSTCCRGFILDGCAANLKALDALLTHCANAVGILCMSYLFNNAGDKIKSNQIDKFSGALNTVMSHSANASDQWRAATKTLPPKTLFHRLASAFERNDVLVKAWQEIKTFIGVFSTGDEAKSAKVKLCREGLARVRPDDIHQEF 648
++ IL ELGDG YTV FDGT Y CECFG+GIRFI + G++CQ LL LSMLA S+D++ ++G++H + M++KL CRGF+LDGC+ NLKAL AL+THC AVG+ CMS++ N AG++I+S QIDKF+GAL+TV+SHS NA DQWR AT T PPK HR S +ERN+ LV WQ K FI FS+ DE KS K C LAR+ D HQEF
Sbjct: 79 MKIILGELGDGNYTVCFDGTLYRCECFGIGIRFIDQTGQICQPLLWLSMLANSMDYQDIYGEIHKVVFMEYKLKPERCRGFMLDGCSPNLKALLALVTHCRFAVGVRCMSHVINKAGNQIESGQIDKFAGALHTVLSHSHNAHDQWRKATNTTPPKAPNHRWGSTYERNNQLVTGWQPAKNFIDAFSSSDETKSRKADFCWGELARLGKDGYHQEF 294
BLAST of mRNA_F-serratus_M_contig134.2540.1 vs. uniprot
Match: A0A6H5KSI8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI8_9PHAE) HSP 1 Score: 259 bits (663), Expect = 1.230e-80 Identity = 120/244 (49.18%), Postives = 174/244 (71.31%), Query Frame = 1
Query: 4 QKILEELGDGTYTVVFDGTPYCCECFGVGIRFIGRDGKVCQRLLSLSMLAKSLDFRAVFGDVHNIPNMKFKLDSTCCRGFILDGCAANLKALDALLTHCANAVGILCMSYLFNNAGDKIKSNQIDKFSGALNTVMSHSANASDQWRAATKTLPPKTLFHRLASAFERNDVLVKAWQEIKTFIGVFSTGDEAKSAKVKLCREGLARVRPDDIHQEFVLQLEFALAVDLRVHPTRAMYLLEEEGML 735
Q+IL+E+GD Y + FD TPY CFG+GIRF+ ++G++ QR+L+LSML+KS+DF+A+ G+V I ++K+D + C GF+LDGC AN+KALD LL + NAVG+ C S+L NN G+++ S + DKF+G L+ +++HS NA D W TK PPK + HR +S + RN+ LV WQ++KTF+ F++ +E++S RE L RVRPD +HQE +LQL FA+ VD+ +H RA +LLE +G L
Sbjct: 51 QRILDEVGDSRYAITFDETPYRAACFGIGIRFVNKEGQITQRVLNLSMLSKSMDFKAIHGEVMKITVDEYKIDRSKCVGFMLDGCGANMKALDTLLLNFPNAVGVRCFSHLLNNCGNELSSEETDKFAGHLHVLLAHSHNARDLWLQETKVSPPKPVSHRWSSRYVRNNALVLNWQQMKTFVDKFTSTEESRSKSAAAMREELGRVRPDGVHQELILQLGFAVTVDVGIHLVRATHLLEGDGFL 294
BLAST of mRNA_F-serratus_M_contig134.2540.1 vs. uniprot
Match: A0A6H5KEG8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEG8_9PHAE) HSP 1 Score: 254 bits (650), Expect = 4.530e-77 Identity = 128/245 (52.24%), Postives = 174/245 (71.02%), Query Frame = 1
Query: 4 QKILEELGDGTYTVVFDGTPYCCECFGVGIRFIGRDGKVCQRLLSLSMLAKSLDFRAVFGDVHNIPNMKFKLDSTCCRGFILDGCAANLKALDALLTHCANAVGILCMSYLFNNAGDKIKSNQIDKFSGALNTVMSHSANASDQWRAATKTL-PPKTLFHRLASAFERNDVLVKAWQEIKTFIGVFSTGDEAKSAKVKLCREGLARVRPDDIHQEFVLQLEFALAVDLRVHPTRAMYLLEEEGML 735
+KIL+ELGD Y++ F+ TPY CFGVGIRFI + GK+ QR+LSLSML+KS+DF A+ G+V + ++LD C GF+LDGC+ANLKALD L + A G+ C S+L N+G+++ S+ DKF+G L+T++SHS NA D W T + PPK HR +S FERND LV+ WQ++K+F+ F++ DE+KS R+ LA VRPD+IHQE VLQLEFA+A D+ +H TRA +LLE +G L
Sbjct: 334 KKILDELGDSRYSITFNETPYRAACFGVGIRFITKAGKITQRVLSLSMLSKSMDFAAINGEVMKVVVDDYRLDRQKCVGFMLDGCSANLKALDTLKMNFRIATGVRCFSHLCKNSGNEMNSDDTDKFAGHLHTLLSHSHNAKDLWLQETGGVAPPKPPSHRWSSRFERNDCLVRNWQQMKSFVNKFTSADESKSKSAAAMRDTLAHVRPDNIHQELVLQLEFAVAADVGIHLTRATHLLEGDGFL 578
BLAST of mRNA_F-serratus_M_contig134.2540.1 vs. uniprot
Match: A0A6H5JX99_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX99_9PHAE) HSP 1 Score: 245 bits (625), Expect = 1.220e-75 Identity = 115/190 (60.53%), Postives = 144/190 (75.79%), Query Frame = 1
Query: 10 ILEELGDGTYTVVFDGTPYCCECFGVGIRFIGRDGKVCQRLLSLSMLAKSLDFRAVFGDVHNIPNMKFKLDSTCCRGFILDGCAANLKALDALLTHCANAVGILCMSYLFNNAGDKIKSNQIDKFSGALNTVMSHSANASDQWRAATKTLPPKTLFHRLASAFERNDVLVKAWQEIKTFIGVFSTGDEAK 579
ILEELGDG YTV FDGTPY CECFG+GIRFI + G++C RLL LSMLA S+D++ ++G++H + M++KL CRGF+LDGC+ NLKAL AL+T+C AVG+ CMS+L NN G++I S QIDKF+GAL+TV+SHS NA DQWR AT T PPK HR S +E N+ LV +WQ K FI FS+ DE K
Sbjct: 264 ILEELGDGNYTVCFDGTPYRCECFGIGIRFIDQTGQICPRLLWLSMLANSMDYQDIYGEIHKVVFMEYKLKPERCRGFLLDGCSPNLKALLALVTYCRFAVGVRCMSHLINNTGNQIDSGQIDKFAGALHTVLSHSHNAKDQWRKATNTTPPKAPSHRWGSTYETNNQLVTSWQPTKDFIDAFSSSDETK 453
BLAST of mRNA_F-serratus_M_contig134.2540.1 vs. uniprot
Match: A0A6H5KEZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEZ7_9PHAE) HSP 1 Score: 237 bits (605), Expect = 4.170e-75 Identity = 125/194 (64.43%), Postives = 147/194 (75.77%), Query Frame = 1
Query: 103 GRDGKVCQRLLSLSMLAKSLDFRAVFGDVHNIPNMKFKLDSTCCRGFILDGCAANLKALDALLTHCANAVGILCMSYLFNNAGDKIKSNQIDKFSGALNTVMSHSANASDQWRAATKTLPPKTLFHRLASAFERNDVLVKAWQEIKTFIGVFSTGDEAKSAKVKLCREGLARVRPDDIHQEFVLQLEFALAVDL 684
G+ ++CQRLLSLSMLAKS+DF+ +FG+V+N+ +F LD C GF+LDGCAAN+KAL AL THC NAVG+ CMS LFNNAGD+I+S QIDKF+GAL TV+S S NAS+QWRAAT PPK HR AS+FERND LV WQ K FI FS+ DE +SAK CRE LAR+ HQEF LQLEFALAVDL
Sbjct: 64 GKRDEICQRLLSLSMLAKSMDFKDIFGEVNNVL-ARFGLDPARCVGFMLDGCAANMKALMALTTHCRNAVGMRCMSDLFNNAGDQIESTQIDKFAGALQTVLSVSHNASEQWRAATGMSPPKAPSHRWASSFERNDKLVTDWQHAKHFIDKFSSSDETRSAKAAFCREELARLGQYCYHQEFWLQLEFALAVDL 256
BLAST of mRNA_F-serratus_M_contig134.2540.1 vs. uniprot
Match: A0A6H5JNC2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNC2_9PHAE) HSP 1 Score: 194 bits (494), Expect = 3.890e-58 Identity = 94/197 (47.72%), Postives = 136/197 (69.04%), Query Frame = 1
Query: 145 MLAKSLDFRAVFGDVHNIPNMKFKLDSTCCRGFILDGCAANLKALDALLTHCANAVGILCMSYLFNNAGDKIKSNQIDKFSGALNTVMSHSANASDQWRAATKTLPPKTLFHRLASAFERNDVLVKAWQEIKTFIGVFSTGDEAKSAKVKLCREGLARVRPDDIHQEFVLQLEFALAVDLRVHPTRAMYLLEEEGML 735
ML+KS+DF+A+ G+V I ++K+D + C GF+LDGC AN+KALD LL + NAVG+ C S+L NN G+++ S + DKF+G L+ +++HS NA D W TK PPK + HR +S + RN+ LV WQ++KTF+ F++ +E++S RE L RVR D +HQE +LQL FA+AVD+ +H R +LLE +G L
Sbjct: 1 MLSKSMDFKAIHGEVMKITVDEYKIDRSKCVGFMLDGCGANMKALDTLLLNFPNAVGVRCFSHLLNNCGNELSSEETDKFAGHLHVLLAHSHNARDLWLQETKVSPPKPVSHRWSSRYVRNNALVLNWQQMKTFVDKFTSTEESRSNSAAAMREELGRVRLDGVHQELILQLGFAVAVDVGIHLVRPTHLLEGDGFL 197
BLAST of mRNA_F-serratus_M_contig134.2540.1 vs. uniprot
Match: A0A6H5JW81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW81_9PHAE) HSP 1 Score: 188 bits (478), Expect = 3.100e-54 Identity = 96/198 (48.48%), Postives = 135/198 (68.18%), Query Frame = 1
Query: 145 MLAKSLDFRAVFGDVHNIPNMKFKLDSTCCRGFILDGCAANLKALDALLTHCANAVGILCMSYLFNNAGDKIKSNQIDKFSGALNTVMSHSANASDQWRAATKTL-PPKTLFHRLASAFERNDVLVKAWQEIKTFIGVFSTGDEAKSAKVKLCREGLARVRPDDIHQEFVLQLEFALAVDLRVHPTRAMYLLEEEGML 735
ML+ S+DF A+ G+V + ++LD C GF+LDGC+ANLKALD L + A G+ C S+L N+G+++ S+ KF+G L+T++SHS NA D W T + PPK HR +S FERND LV++WQ++K+F+ F++ DE+KS R+ LA VRPD+IHQE VLQLEF +A D+ +H TRA +LLE +G L
Sbjct: 1 MLSNSMDFAAINGEVMKVVVDDYRLDRQKCVGFMLDGCSANLKALDTLKMNFRIATGVRCFSHLCKNSGNEMNSDDTHKFAGHLHTLLSHSHNAKDLWLQETGGVAPPKPPSHRWSSRFERNDCLVRSWQQMKSFVNKFTSADESKSKSAAAMRDMLAHVRPDNIHQELVLQLEFVVAADVGIHLTRATHLLEGDGFL 198
BLAST of mRNA_F-serratus_M_contig134.2540.1 vs. uniprot
Match: A0A6H5L6R8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R8_9PHAE) HSP 1 Score: 190 bits (483), Expect = 2.390e-53 Identity = 103/246 (41.87%), Postives = 146/246 (59.35%), Query Frame = 1
Query: 1 LQKILEELGDGTYTVVFDGTPYCCECFGVGIRFIGRDGKVCQRLLSLSMLAKSLDFRAVFGDVHNIPNMKFKLDSTCCRGFILDGCAANLKALDALLTHC-ANAVGILCMSYLFNNAGDKIKSNQIDKFSGALNTVMSHSANASDQWRAATKTLPPKTLFHRLASAFERNDVLVKAWQEIKTFIGVFSTGDEAKSAKVKLCREGLARVRPDDIHQEFVLQLEFALAVDLRVHPTRAMYLLEEEGML 735
L L ELG+G YTV FD TPY CECFG+G+RFI ++G+V QR+L ++ML KS+ R + G V++ +F L ++ C GF+LDGCAANL ALD+L H +VGI C S+LFNN G +++ +D+F G L+T++SHS A +R P T HR S +ER+ ++ W + FI + + D+ KS R LAR R D Q VL+++ A+ VD+ T A LE + L
Sbjct: 72 LDTTLSELGNGNYTVCFDATPYRCECFGIGLRFINQNGQVVQRVLKIAMLKKSMSARDIVGQVNDTLGEEFNLRASRCIGFMLDGCAANLLALDSLTQHIYRKSVGIPCFSHLFNNIGTRLRFPDVDEFLGKLHTLLSHSPQAKALFREIVGVTDPPTPNHRWGSRYERDYLIAMNWPGVVKFIEAYKSNDDEKSKTATWLRSELARKRNDGKDQVLVLRMQLAVLVDVGKIVTAACIFLEGDEPL 317
BLAST of mRNA_F-serratus_M_contig134.2540.1 vs. uniprot
Match: A0A6H5JD81_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD81_9PHAE) HSP 1 Score: 186 bits (471), Expect = 7.070e-51 Identity = 101/243 (41.56%), Postives = 140/243 (57.61%), Query Frame = 1
Query: 7 KILEELGDGTYTVVFDGTPYCCECFGVGIRFIGRDGKVCQRLLSLSMLAKSLDFRAVFGDVHNIPNMKFKLDSTCCRGFILDGCAANLKALDALLTHCANAVGILCMSYLFNNAGDKIKSNQIDKFSGALNTVMSHSANASDQWRAATKTLPPKTLFHRLASAFERNDVLVKAWQEIKTFIGVFSTGDEAKSAKVKLCREGLARVRPDDIHQEFVLQLEFALAVDLRVHPTRAMYLLEEEGML 735
K+ E+GD Y + FD TPY CECFGVG+RFIG G+V QR+L LSML KS+ + G+V+ I ++ LD CR + D CAANL A+DAL A+ I C+S+ FNN G ++ S +D F G ++T++SHSA A ++ P T HR S F+R+ V+ W + FI + +GD KS K R+ L RVR D+ Q LQ++ AL VD+ T A +LE + L
Sbjct: 242 KVRGEIGDRPYALCFDATPYLCECFGVGVRFIGSSGQVAQRVLRLSMLKKSMTASDIAGEVNRIVTHEYGLDPDKCRAIMGDSCAANLLAMDALAKLFRYAIVIGCLSHTFNNIGKQLSSLDLDAFLGKMHTLLSHSAGAKALFKEKVGVRAPSTPGHRWGSRFDRDYVIAMNWPGVLEFIAAYESGDTDKSKAAKFMRDELVRVRDDNKTQSLHLQMQLALMVDVGRSVTSATIVLEGDEPL 484 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig134.2540.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig134.2540.1 >prot_F-serratus_M_contig134.2540.1 ID=prot_F-serratus_M_contig134.2540.1|Name=mRNA_F-serratus_M_contig134.2540.1|organism=Fucus serratus male|type=polypeptide|length=245bp LQKILEELGDGTYTVVFDGTPYCCECFGVGIRFIGRDGKVCQRLLSLSMLback to top mRNA from alignment at F-serratus_M_contig134:651894..652837- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig134.2540.1 ID=mRNA_F-serratus_M_contig134.2540.1|Name=mRNA_F-serratus_M_contig134.2540.1|organism=Fucus serratus male|type=mRNA|length=944bp|location=Sequence derived from alignment at F-serratus_M_contig134:651894..652837- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig134:651894..652837- >mRNA_F-serratus_M_contig134.2540.1 ID=mRNA_F-serratus_M_contig134.2540.1|Name=mRNA_F-serratus_M_contig134.2540.1|organism=Fucus serratus male|type=CDS|length=1470bp|location=Sequence derived from alignment at F-serratus_M_contig134:651894..652837- (Fucus serratus male)back to top |