mRNA_F-serratus_M_contig1331.2475.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1331.2475.1 vs. uniprot
Match: A0A6H5J9H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9H5_9PHAE) HSP 1 Score: 189 bits (479), Expect = 3.270e-56 Identity = 104/154 (67.53%), Postives = 123/154 (79.87%), Query Frame = 1
Query: 25 DQLARAIGLPEAFLSD-EEGGGVIQGSASEATLVAVLAARTRALRHMRRLK-SGVSDHDLFSRMTLYASDQAHSSVQKAANIAGLEANIRIIPTPGSRQSQKDPFALDADDLVAAMAKDLADGLTPIFVAANVGSTNTCAIDPVRSLAEGCRRW 480
DQL RA+ LPEAFLS VIQGSASE TLVAV+AARTRAL+HMRR +GVSD +L ++MTLYASDQAHSSVQKAANIAGL +N+R+IPT GS + + + LDA +L AM +D A GLTP+FV+ANVGSTNTCA+DPVRSL E CRR+
Sbjct: 193 DQLGRAVDLPEAFLSSGXXXXXVIQGSASEGTLVAVVAARTRALKHMRRRSPAGVSDSELLAKMTLYASDQAHSSVQKAANIAGLGSNLRLIPTSGSCEDGQRCYTLDAAELSEAMREDEAAGLTPVFVSANVGSTNTCAVDPVRSLGEACRRF 346
BLAST of mRNA_F-serratus_M_contig1331.2475.1 vs. uniprot
Match: D8LUA2_ECTSI (Tyrosine Decarboxylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUA2_ECTSI) HSP 1 Score: 189 bits (479), Expect = 2.040e-54 Identity = 105/161 (65.22%), Postives = 126/161 (78.26%), Query Frame = 1
Query: 25 DQLARAIGLPEAFLSD--EEGGGVIQGSASEATLVAVLAARTRALRHMRRLK-SGVSDHDLFSRMTLYASDQAHSSVQKAANIAGLEANIRIIPTPGSRQSQKDPFALDADDLVAAMAKDLADGLTPIFVAANVGSTNTCAIDPVRSLAEGCRRWIFVDTT 498
DQL RA+ LPEAFLS VIQGSASE+TLVAVLAARTRAL+HMRR +GVSD +L ++MTLYASDQAHSSVQKAANIAGL +N+R+IPT GS + + + LDA +L AM +D A GLTP+FV+ANVGSTNTCA+DPVRSL E CR + ++T
Sbjct: 194 DQLGRAVDLPEAFLSSGXXXXXXVIQGSASESTLVAVLAARTRALKHMRRRSPAGVSDSELLAKMTLYASDQAHSSVQKAANIAGLGSNLRLIPTRGSGEDGQRCYTLDAGELSEAMREDEAAGLTPVFVSANVGSTNTCAVDPVRSLGEACRSFSTGEST 354
BLAST of mRNA_F-serratus_M_contig1331.2475.1 vs. uniprot
Match: A0A3M1HQP1_9CHLR (Aspartate aminotransferase family protein n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A3M1HQP1_9CHLR) HSP 1 Score: 124 bits (310), Expect = 3.000e-30 Identity = 77/160 (48.12%), Postives = 99/160 (61.88%), Query Frame = 1
Query: 25 DQLARAIGLPEAFLSDEEGGGVIQGSASEATLVAVLAARTRALRHMRRLKSGVSDHDLFSRMTLYASDQAHSSVQKAANIAGL-EANIRIIPTPGSRQSQKDPFALDADDLVAAMAKDLADGLTPIFVAANVGSTNTCAIDPVRSLAEGCRR---WIFVD 492
D LA+A+GLPE FLS GGGVIQ SAS A+L A+LAAR RAL + L H L R+ YAS AHSS++KA IAGL N+ ++ D +A+ DDL + D A GLTP FVAA +G+T++ A+DP+R+L E CRR W+ VD
Sbjct: 128 DWLAKAMGLPEQFLSTSTGGGVIQDSASSASLCALLAARERALDYRGNL------HGLDGRLVAYASAHAHSSIEKAMMIAGLGRENLHLVAVD-------DSYAMRPDDLARLIKADRAAGLTPAFVAATIGTTSSNAMDPIRALGEVCRREDVWLHVD 274
BLAST of mRNA_F-serratus_M_contig1331.2475.1 vs. uniprot
Match: A0A6I9IM08_VICPA (aromatic-L-amino-acid decarboxylase n=4 Tax=Camelidae TaxID=9835 RepID=A0A6I9IM08_VICPA) HSP 1 Score: 122 bits (307), Expect = 7.920e-30 Identity = 74/169 (43.79%), Postives = 104/169 (61.54%), Query Frame = 1
Query: 1 TSMLPTQADQLARAIGLPEAFLSDE--EGGGVIQGSASEATLVAVLAARTRALRHMRRLKSGVSDHDLFSRMTLYASDQAHSSVQKAANIAGLEANIRIIPTPGSRQSQKDPFALDADDLVAAMAKDLADGLTPIFVAANVGSTNTCAIDPVRSLAEGCRR---WIFVD 492
T + D L R + LPEAFL+ E EGGGVIQGSASEATLVA+LAART+ +R ++ G++ + ++ YASDQAHSSV++A I G++ ++ IP+ G FAL A L A+ +D A GL P FV A +G+T+ C+ D + + CR+ W+ VD
Sbjct: 112 TELETVMMDWLGRMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVIRCLQTASPGLTQATVMEKLVAYASDQAHSSVERAGLIGGVK--LKAIPSDGK-------FALRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPVCRKEGVWLHVD 271
BLAST of mRNA_F-serratus_M_contig1331.2475.1 vs. uniprot
Match: A0A2V9R9N3_9BACT (Aspartate aminotransferase family protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9R9N3_9BACT) HSP 1 Score: 122 bits (306), Expect = 9.920e-30 Identity = 76/160 (47.50%), Postives = 103/160 (64.38%), Query Frame = 1
Query: 25 DQLARAIGLPEAFLSDEEGGGVIQGSASEATLVAVLAARTRALRHMRRLKSGVSDHDLFSRMTLYASDQAHSSVQKAANIAGLEA-NIRIIPTPGSRQSQKDPFALDADDLVAAMAKDLADGLTPIFVAANVGSTNTCAIDPVRSLAEGCRR---WIFVD 492
D L A+GLPE FLS GGGVIQ +AS +TL AVLAAR RA + R + G+++ ++ Y S+QAHSS++KA IAG+ + N+R+I T + FA++ + L AA+ KD ADGLTP FV A VG+T++ AIDPV + E CR W+ VD
Sbjct: 120 DWLVPALGLPEKFLSTSSGGGVIQDTASSSTLCAVLAARERAT-NFRSNQRGIAE-----KLCAYTSNQAHSSIEKAIKIAGIGSENLRLIETDEN-------FAMNPEALAAAIEKDRADGLTPFFVCATVGTTSSNAIDPVPQIGEVCREHGLWLHVD 266
BLAST of mRNA_F-serratus_M_contig1331.2475.1 vs. uniprot
Match: A0A812K9W8_9DINO (ELI5 protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812K9W8_9DINO) HSP 1 Score: 120 bits (302), Expect = 4.290e-29 Identity = 79/175 (45.14%), Postives = 105/175 (60.00%), Query Frame = 1
Query: 1 TSMLPTQADQLARAIGLPEAFLSDEEGGGVIQGSASEATLVAVLAARTRALRHMRRLKSGVSDHD---LFSRMTLYASDQAHSSVQKAANIAGL-EANIRIIPTPGSRQSQKDPFALDADDLVAAMAKDLADGLTPIFVAANVGSTNTCAIDP-------VRSLAEGCRRWIFVD 492
T + D + RAIGLPEAFLS+ +GGGVIQG+ASEA LVA++AAR RAL GV + D L R+ YAS+QAHSS+ KAA + G+ +N+R++ T G+ A+DA+ L A + +D GL P FV A +G+T+T AIDP VR G W+ VD
Sbjct: 116 TELETRMLDWMGRAIGLPEAFLSEGDGGGVIQGTASEAALVAMVAARQRALDDR-----GVEETDRAALNGRLVAYASEQAHSSIVKAAMVCGIGRSNVRLVGTDGN-------LAMDAERLRAQVEEDARAGLIPFFVCATLGTTSTGAIDPLAEIVRIVRPTPSGGGGWVHVD 278
BLAST of mRNA_F-serratus_M_contig1331.2475.1 vs. uniprot
Match: A0A7X9LBW3_9ACTN (Aspartate aminotransferase family protein n=1 Tax=Propionibacterium sp. TaxID=1977903 RepID=A0A7X9LBW3_9ACTN) HSP 1 Score: 120 bits (301), Expect = 4.940e-29 Identity = 76/162 (46.91%), Postives = 100/162 (61.73%), Query Frame = 1
Query: 25 DQLARAIGLPEAFLSDE-EGGGVIQGSASEATLVAVLAARTRALRHMRRLKSGVSDHDL-FSRMTLYASDQAHSSVQKAANIAGL-EANIRIIPTPGSRQSQKDPFALDADDLVAAMAKDLADGLTPIFVAANVGSTNTCAIDPVRSLAEGCRR---WIFVD 492
D +A +GLP+AF S GGGVIQGSASEATL ++LAAR RA G +HD +++ YA+ QAHSS++K IAG+ AN+R++P G FA+ D L A+A D A GLTP +V A VG+TN+ AIDPVR++ E R W+ VD
Sbjct: 119 DWMAELLGLPDAFRSTSPSGGGVIQGSASEATLTSILAARHRAT-------DGAVNHDSDTTKLVAYATPQAHSSIEKGLRIAGIGTANLRVVPHDGD-------FAMRPDSLAEAIAADRAAGLTPFWVCATVGTTNSLAIDPVRAVGEVARETGLWLHVD 266
BLAST of mRNA_F-serratus_M_contig1331.2475.1 vs. uniprot
Match: A0A8B8SQT5_CAMFR (aromatic-L-amino-acid decarboxylase isoform X6 n=1 Tax=Camelus ferus TaxID=419612 RepID=A0A8B8SQT5_CAMFR) HSP 1 Score: 120 bits (301), Expect = 6.280e-29 Identity = 73/169 (43.20%), Postives = 102/169 (60.36%), Query Frame = 1
Query: 1 TSMLPTQADQLARAIGLPEAFLSDE--EGGGVIQGSASEATLVAVLAARTRALRHMRRLKSGVSDHDLFSRMTLYASDQAHSSVQKAANIAGLEANIRIIPTPGSRQSQKDPFALDADDLVAAMAKDLADGLTPIFVAANVGSTNTCAIDPVRSLAEGCRR---WIFVD 492
T + D L R + LPEAFL+ E EGGGVIQGSASEATLVA+LAART+ R ++ G++ + ++ YASDQAHSSV++A I G++ ++ IP+ G FAL A L A+ +D A GL P FV A +G+T+ C+ D + + C + W+ VD
Sbjct: 289 TELETVMMDWLGRMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVTRRLQTTSPGLTQAAVMEKLVAYASDQAHSSVERAGLIGGVK--LKAIPSDGK-------FALRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPVCHKEGVWLHVD 448
BLAST of mRNA_F-serratus_M_contig1331.2475.1 vs. uniprot
Match: A0A6J1YBS9_ACIJB (aromatic-L-amino-acid decarboxylase isoform X3 n=2 Tax=Felidae TaxID=9681 RepID=A0A6J1YBS9_ACIJB) HSP 1 Score: 118 bits (295), Expect = 1.370e-28 Identity = 69/169 (40.83%), Postives = 103/169 (60.95%), Query Frame = 1
Query: 1 TSMLPTQADQLARAIGLPEAFLSDE--EGGGVIQGSASEATLVAVLAARTRALRHMRRLKSGVSDHDLFSRMTLYASDQAHSSVQKAANIAGLEANIRIIPTPGSRQSQKDPFALDADDLVAAMAKDLADGLTPIFVAANVGSTNTCAIDPVRSLAEGCRR---WIFVD 492
T + D L + + LPEAFL+ E EGGGVIQGSASEATL+A+LAART+A R ++ G++ + ++ Y+SDQAHSSV++A I G++ ++ IP+ G FA+ L AM +D A+GL P FV A +G+T+ C+ D + + C + W+ +D
Sbjct: 142 TELETVMMDWLGKMLKLPEAFLAGEAGEGGGVIQGSASEATLMALLAARTKATRRLQAASPGLTQGAIMEKLVAYSSDQAHSSVERAGLIGGVK--MKSIPSDGK-------FAMRGSALQEAMERDKAEGLIPFFVVATLGTTSCCSFDSLLEVGPICNKEDVWLHID 301
BLAST of mRNA_F-serratus_M_contig1331.2475.1 vs. uniprot
Match: A0A7J8HC16_MOLMO (Dopa decarboxylase n=1 Tax=Molossus molossus TaxID=27622 RepID=A0A7J8HC16_MOLMO) HSP 1 Score: 119 bits (298), Expect = 1.490e-28 Identity = 71/169 (42.01%), Postives = 102/169 (60.36%), Query Frame = 1
Query: 1 TSMLPTQADQLARAIGLPEAFLSDEEG--GGVIQGSASEATLVAVLAARTRALRHMRRLKSGVSDHDLFSRMTLYASDQAHSSVQKAANIAGLEANIRIIPTPGSRQSQKDPFALDADDLVAAMAKDLADGLTPIFVAANVGSTNTCAIDPVRSLAEGCRR---WIFVD 492
T + D L + + LP AFL++E G GGVIQGSASEATLVA+LAAR+RA R ++ + G+ + + ++ YASDQAH SV++AA I G++ R IP+ G FA+ A L A+ +D A GL P FV A +G+T+ C+ D + + C R W+ +D
Sbjct: 112 TELETVMLDWLGKMLRLPPAFLAEEAGAGGGVIQGSASEATLVALLAARSRATRQLQAAQPGLPEAAVLEKLVAYASDQAHCSVERAALIGGVK--FRAIPSDGK-------FAMRASALTGALERDRAAGLVPFFVVATLGTTSCCSFDSISEVGPICDRENLWLHID 271 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1331.2475.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1331.2475.1 >prot_F-serratus_M_contig1331.2475.1 ID=prot_F-serratus_M_contig1331.2475.1|Name=mRNA_F-serratus_M_contig1331.2475.1|organism=Fucus serratus male|type=polypeptide|length=165bp MLPTQADQLARAIGLPEAFLSDEEGGGVIQGSASEATLVAVLAARTRALRback to top mRNA from alignment at F-serratus_M_contig1331:31364..32120+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1331.2475.1 ID=mRNA_F-serratus_M_contig1331.2475.1|Name=mRNA_F-serratus_M_contig1331.2475.1|organism=Fucus serratus male|type=mRNA|length=757bp|location=Sequence derived from alignment at F-serratus_M_contig1331:31364..32120+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1331:31364..32120+ >mRNA_F-serratus_M_contig1331.2475.1 ID=mRNA_F-serratus_M_contig1331.2475.1|Name=mRNA_F-serratus_M_contig1331.2475.1|organism=Fucus serratus male|type=CDS|length=990bp|location=Sequence derived from alignment at F-serratus_M_contig1331:31364..32120+ (Fucus serratus male)back to top |