mRNA_F-serratus_M_contig1326.2423.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1326.2423.1 vs. uniprot
Match: A0A6H5JZ79_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ79_9PHAE) HSP 1 Score: 378 bits (971), Expect = 4.250e-117 Identity = 200/408 (49.02%), Postives = 270/408 (66.18%), Query Frame = 1
Query: 103 LWRAFPNPPKPPTPVLPDARDLTLEQMSEGEFE-VSYGGQPSARRAIEEFEREERSRIHLATARRVLRYNLVQQQTKETRETLELEQSAAXXXRIMLDD--------DDVAEDDRDPKWNKVFPWEGMVEAEYEWLPNPELITFSAFGLLYNWVIPVGNIFRDALGRAYGHRHRLPGPERFAFNFENSFKEADYHMPCFGQRLNVSSFEWWFHVYTDTYLKTMLDYDMPEELITDKMDEIADELYYEIMVGPEAFEPVPHVKVVLDTLAGWRDN-GGPKLAVVANSDERLNVTLENLGLLPYFDFVLTSQEACTKVNEVDLYDRALEMAGVDDPAKAIHFGSDYDLDVVGPSKAGWETCLVKPRQPDYEQPGEIYQYHRLMRISEILHRYGLPGAEMPVLFRRRGNFW 1296
L AFP+ P+ P P LPD R++T +Q+ + V+YGG P+ARRA +FER ER RIH TA RV+ Y +Q + E + + + A R+ D +V E+D EG V A+Y W PELITFSA+G+LYNW +P+G + R+ALGR++ + HR+P P F +F+ S ++A YH+PC+G N+SS++WWFHV+TD YLKT+ ++ M E+++ DK+D++ DELYYEI VGPEAFE +P VKVVLD LA WRDN GGPKLAVVA+ D+RL+V LENLGLLPYFDFVLTS+E + E ++Y+ ALE AGV K +H G Y+ D+ G +AG E VK Q YE+P E Y++HR+ I E+L+R GLP A+ + RRRGNFW
Sbjct: 114 LESAFPDIPQAPYPTLPDPREMTSKQIEAAALQDVNYGGLPAARRANIDFERSERERIHFETATRVMNYE-IQAERAEVMLSKNKKLTPAEARRLRRADLKNNYYGLIEVTEED-----------EG-VRADYTWDQEPELITFSAYGVLYNWHLPMGLLMREALGRSHNYVHRMPPPGAFQKHFKESHEDAAYHIPCYGAHENMSSWDWWFHVFTDAYLKTINEFYMDEDIVLDKIDDLVDELYYEITVGPEAFEVMPLVKVVLDRLAAWRDNEGGPKLAVVADDDDRLHVVLENLGLLPYFDFVLTSRETGYEPRETNMYEIALETAGVKQAKKGLHVGCKYETDITGSCEAGMEAVSVKRCQTLYERPNEPYEFHRVYEIGELLNRLGLPQADEEYMSRRRGNFW 508
BLAST of mRNA_F-serratus_M_contig1326.2423.1 vs. uniprot
Match: D8LIY6_ECTSI (Haloacid dehalogenase-like hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY6_ECTSI) HSP 1 Score: 347 bits (891), Expect = 3.330e-107 Identity = 184/388 (47.42%), Postives = 256/388 (65.98%), Query Frame = 1
Query: 166 LTLEQMSEGEFE-VSYGGQPSARRAIEEFEREERSRIHLATARRVLRYNLVQQQTK----ETRETLELEQSAAXXXRIMLDDD-----DVAEDDRDPKWNKVFPWEGMVEAEYEWLPNPELITFSAFGLLYNWVIPVGNIFRDALGRAYGHRHRLPGPERFAFNFENSFKEADYHMPCFGQRLNVSSFEWWFHVYTDTYLKTMLDYDMPEELITDKMDEIADELYYEIMVGPEAFEPVPHVKVVLDTLAGWRDN-GGPKLAVVANSDERLNVTLENLGLLPYFDFVLTSQEACTKVNEVDLYDRALEMAGVDDPAKAIHFGSDYDLDVVGPSKAGWETCLVKPRQPDYEQPGEIYQYHRLMRISEILHRYGLPGAEMPVLFRRRGNFW 1296
+T +Q+ + V+YGG P+ARRA +FER ER RIH TA RV+ Y + ++ + E ++ E A R L ++ +V E+D EG++ A+Y W PEL+TFSA+G+LYNW +P+G + R+ALGR++ + HR+P P F +F+ S ++A YH+PC+G N+SS++WWFHV+TD YLKT+ ++ M E+++ DK+DE+ DELYYEI VGPEAFE +P VKVVLD LA WRDN GGPKLAVVA+ D+RL+V LENLGLLPYFDFVLTS+E + E ++Y+ ALE AGV K +H G Y+ D+ G + G E VK Q YE+P + Y++H + E+L+R GLP A+ + RRRGNFW
Sbjct: 1 MTSKQIEAAALQDVNYGGLPAARRANIDFERSERERIHFETATRVMNYEIQAERAEVMLSENKKLTPAE--ARRLRRAALKNNYYGLIEVTEED-----------EGVM-ADYTWDQEPELVTFSAYGVLYNWHLPMGLLMREALGRSHNYIHRMPPPGAFQKHFKESHEDAAYHIPCYGAHENMSSWDWWFHVFTDAYLKTINEFYMDEDIVLDKIDELVDELYYEITVGPEAFEVMPLVKVVLDRLAAWRDNEGGPKLAVVADDDDRLHVVLENLGLLPYFDFVLTSRETGYEPRETNMYEIALETAGVKRAKKGLHVGCKYETDITGSCETGMEAVSVKRFQTLYERPNDPYEFHPVYENRELLNRLGLPQADEEYMSRRRGNFW 374
BLAST of mRNA_F-serratus_M_contig1326.2423.1 vs. uniprot
Match: W7TTJ7_9STRA (Haloacid dehalogenase-like hydrolase domain containing 3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTJ7_9STRA) HSP 1 Score: 166 bits (420), Expect = 4.240e-41 Identity = 93/249 (37.35%), Postives = 137/249 (55.02%), Query Frame = 1
Query: 484 PNPELITFSAFGLLYNWVIPVGNIFRDALGRAYGHRHRLPGPERFAFNFENSFKEADYHMPCFGQRLNVSSFEWWFHVYTDTYLKTMLDYDMPEELITDKMDEIADELYYEIMVGPEAFEPVPHVKVVLDTLAGWRDNGGPKLAVVANSDERLNVTLENLGLLPYFDFVLTSQEACTKVNEVDLYDRALEMAGVDDPAKAIHFGSDYDLDVVGPSKAGWETCLVKPRQPDYEQPGEIYQYHRLMRISEI 1230
P PELIT +AFGLL VG FR+ + Y ++ RLP PERF F+ ++ P FG + +S+ EWW + + KT LD P+E + + + +ELYYE + A+E V V ++D L WR GGPKL V+ + DERL LENL +L YFD V++S+E+ + + A+E AGV DP K +H G ++D DVVG + AG ++ V DY +P + + +I ++
Sbjct: 112 PVPELITMNAFGLLIEPTDEVGLFFREVFMKHYDYKVRLPRPERFTVAFDKAYDARRSEYPNFGAKAGMSAEEWWAPI----FYKTFLDVGFPKEDLDEVFVGVFEELYYESLTSEWAWETVDDVLPMMDKLQEWRMQGGPKLGVICDYDERLITILENLDILHYFDVVVSSRESGAGKPDPRPFLLAMEKAGVKDPKKVMHLGRNFDHDVVGAAAAGMDSMWVVMPSYDYLEPEQEARQVEFTKIGDL 356
BLAST of mRNA_F-serratus_M_contig1326.2423.1 vs. uniprot
Match: A0A7S1C225_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C225_9STRA) HSP 1 Score: 142 bits (359), Expect = 1.060e-32 Identity = 94/288 (32.64%), Postives = 145/288 (50.35%), Query Frame = 1
Query: 442 FPWEGMVEAEYEWLPNPELITFSAFGLLYNWVIPVGNIFRDALGRAYGHRHRLPGPERFAFNFENSFKEADYHMPCFGQRLNVSSFEWWFHVYTDTYLKTMLDY----DMPEELITDK---MDEIADELYYEIMVGPEAFEPVPHVKVVLDTLAGWRDNGGPKLAVVANSDERLNVTLENLGLLPYFDFVLTSQEACTKVNEVDLYDRALEMAGVDDPAKAIHFGSDYDLDVVGPSKAGWETCLVKPRQPDY-EQPGEIYQYHRLMRISEILHRYGLPGAEMPVLFRR 1281
FP EG+ +LITF A G L VG +R+AL +A+G+ RLP P+ F F + ++ + PC+G+ ++ EWW V DTY + M D D+ EEL ++ + + +LY E G EA+E +P L LA WR+ GGP++ +V+NSD RL+ L LG+ YFDFVLT++ + + D++ AL A V+DP A H G+D+ D ++AGW + + D E + + + +L YG+ +L R
Sbjct: 123 FPREGV-----------KLITFDAVGTLIRMTTSVGMFYREALNQAFGYV-RLPRPDLFTAAFREAHRQQNAAYPCYGKNDGMTGEEWWRTVVRDTY-RNMYDLFDDADLVEELESEDGEVFEAVFQQLYNEDFTGEEAWELLPDAYRTLRRLALWREQGGPRIGIVSNSDARLSRILYALGIEEYFDFVLTAEGTGSAKPDGDMFRIALREAQVEDPRLAAHVGNDFGKDCRCAAEAGWHGIWMHEDKFDLPEDVPDALDFSTAGDLVGVLAMYGVAPETREILTTR 397
BLAST of mRNA_F-serratus_M_contig1326.2423.1 vs. uniprot
Match: A0A068RE34_9FUNG (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068RE34_9FUNG) HSP 1 Score: 92.8 bits (229), Expect = 2.410e-16 Identity = 79/286 (27.62%), Postives = 127/286 (44.41%), Query Frame = 1
Query: 484 PNPELITFSAFGLLYNWVIPVGNIFRDALGRAYGHRHRLPG----PERFAFNFENSFKEADYHMPCFGQRLNVSSFEWWFHVYTDTYLKTMLDYDMPEELITDKMDEIADELYYEIMVGPEAFEPVPHVKVVLDTLAGWRDNGGPKLAVVANSDERLNVTLENLGLLPYFDFVLTSQEACTKVNEVDLYDRALEMAGVDDPAK---AIHFGSDYDLDVVGPSKAGWETCLVKPRQPDYEQPGEIYQYHRLMRIS----EILHRYGLPGAEMPVLFRRRGNFWEEPD 1308
P +L+TF A+ L+ P G+ Y H G +R F ++K+ H P +G + ++ +WW + DT++ +P++ + K + + + LY E + P V DTL + G V++NSDERL+ L NLG+ PYFDFVL S A + + +++D+AL + +P + A+H G D + D G AGW L++ + YE + LM S I+ + LP LF R N P+
Sbjct: 5 PRIKLVTFDAYNTLFK---PRGSTTAQ-----YIHEASQLGIHVCRDRLTKVFGRAYKDQMIHHPFYGFQEGMNPRKWWEELVYDTFISA----GVPKKELDPKFNLLFNSLY-ERFTSDRGYSTFPDVH---DTLV-YLKKQGISTGVISNSDERLSEVLHNLGIRPYFDFVLPSYRAGYEKPKKEIFDQALRIMHPYNPTRPDQALHVGDDLNADYKGALNAGWNALLLERGKLSYEDTPSMQSDQDLMDGSTKPRSIMTLHDLPPRL--CLFGVRDNVTSHPN 271
BLAST of mRNA_F-serratus_M_contig1326.2423.1 vs. uniprot
Match: UPI0004423180 (haloacid dehalogenase-like hydrolase domain-containing protein 3 isoform X1 n=2 Tax=Python bivittatus TaxID=176946 RepID=UPI0004423180) HSP 1 Score: 82.0 bits (201), Expect = 2.570e-13 Identity = 68/248 (27.42%), Postives = 109/248 (43.95%), Query Frame = 1
Query: 496 LITFSAFGLLYNWVIPVGNIFRDALGRAYGHRHRLPGPERFAFNFENSFKEADYHMPCFGQRLNVSSFEWWFHVYTDTYLKTMLDYDMPEELITDKMDEIADELYYEIMVGPEAFEPVPHVKVVLDTLAGWRDNGGPKLAVVANSDERLNVTLENLGLLPYFDFVLTSQEACTKVNEVDLYDRALEMAGVDDPAKAIHFGSDYDLDVVGPSKAGWETCLVKPRQPDYEQPGEIYQYHRLMRISEILHR 1239
L+T+ L +PVG + A +A+G + +P E +F ++K + P +G +SS +WW V +T+ + L+ +K+ Y P+ +E +P L W G +AVV+NSD R+ L L YF FVLTS+E + ++ +AL A V+ P A H G Y D + KAG + L K + E E+ + H L +S++ R
Sbjct: 43 LLTWDVKDTLLRLRLPVGESY-SAEAQAFGLQ--VPA-EVLNRSFSQAYKSQNQRFPNYGLGQGLSSKQWWLGVVLETFRLAGVHDSSVLRLVAEKL--------YRDYSSPKNWELLPGASETLR----WCQQLGIPMAVVSNSDRRVQEILSQCNLRQYFQFVLTSEEVGFAKPDKRIFLKALHSAKVE-PQLAAHVGDHYVNDYLAARKAGLHSFLFKMAEEPIESDMEVPENHLLPSLSDLRGR 273
BLAST of mRNA_F-serratus_M_contig1326.2423.1 vs. uniprot
Match: A0A077WT55_9FUNG (Uncharacterized protein n=1 Tax=Lichtheimia ramosa TaxID=688394 RepID=A0A077WT55_9FUNG) HSP 1 Score: 80.1 bits (196), Expect = 3.100e-13 Identity = 55/175 (31.43%), Postives = 87/175 (49.71%), Query Frame = 1
Query: 664 PCFGQRLNVSSFEWWFHVYTDTYLKTMLDYDMPEELITDKMDEIADELYYEIMVGPEAFEPVPHVKVVLDTLAGWRDNGGPKLAVVANSDERLNVTLENLGLLPYFDFVLTSQEACTKVNEVDLYDRALEMAGVDDPAK---AIHFGSDYDLDVVGPSKAGWETCLVKPRQPDYE 1179
P +G + ++ +WW + +T++ +P++ + K + + + LY E + P V DTLA + G V++NSDERL L NLGL PYFDFVL S A + E +++D+AL + +P + A+H G D D G AGW L++ + YE
Sbjct: 5 PFYGFQEGMNPRKWWEELVYNTFISA----GVPKKELDPKFNVLFNSLY-ERFTSDRGYSTFPDVH---DTLA-YLKKQGISTGVISNSDERLLEVLHNLGLRPYFDFVLPSYRAGYEKPEKEIFDQALRIMHPRNPTRPDQALHVGDDLHTDYRGAINAGWNALLLERGKLSYE 170
BLAST of mRNA_F-serratus_M_contig1326.2423.1 vs. uniprot
Match: V8NNE0_OPHHA (Haloacid dehalogenase-like hydrolase domain-containing protein 3 (Fragment) n=8 Tax=Elapidae TaxID=8602 RepID=V8NNE0_OPHHA) HSP 1 Score: 79.3 bits (194), Expect = 1.450e-12 Identity = 70/249 (28.11%), Postives = 112/249 (44.98%), Query Frame = 1
Query: 496 LITFSAFGLLYNWVIPVGNIFRDALGRAYGHRHRLPGPERFAFNFENSFKEADYHMPCFGQRLNVSSFEWWFHVYTDTY-LKTMLDYDMPEELITDKMDEIADELYYEIMVGPEAFEPVPHVKVVLDTLAGWRDNGGPKLAVVANSDERLNVTLENLGLLPYFDFVLTSQEACTKVNEVDLYDRALEMAGVDDPAKAIHFGSDYDLDVVGPSKAGWETCLVKPRQPDYEQPGEIYQYHRLMRISEILHR 1239
L+T+ L + VG + A +A+G + +P E +F ++ + P +G +SS +WW V +T+ L + D +D + IA++LY + P+ +E VP +L W G +AV++NSD+RL L L YF FVLTS+E + ++ AL A V+ P A H G Y D + KAG + L K E E+ + H L + ++ R
Sbjct: 21 LLTWDVKDTLLRLRVSVGQSY-SAEAQAFGLQ--VPA-EVLNHSFSQAYTSQNQRFPNYGSSQGLSSKQWWLGVVMETFQLAGIHD--------SDVLWPIAEKLYQDYS-SPKIWELVPGAIEMLQ----WCQQQGIPMAVISNSDQRLQEILSRCNLQQYFQFVLTSEEVGFAKPDQRIFLEALHSAKVE-PQLAAHVGDHYVNDYLAARKAGLHSFLFKMAGEPIENDMEVPENHLLSSLLDLQAR 251
BLAST of mRNA_F-serratus_M_contig1326.2423.1 vs. uniprot
Match: A0A6P9CUH0_PANGU (Haloacid dehalogenase-like hydrolase domain-containing protein 3 n=3 Tax=Colubroidea TaxID=34989 RepID=A0A6P9CUH0_PANGU) HSP 1 Score: 75.5 bits (184), Expect = 2.270e-11 Identity = 70/249 (28.11%), Postives = 110/249 (44.18%), Query Frame = 1
Query: 496 LITFSAFGLLYNWVIPVGNIFRDALGRAYGHRHRLPGPERFAFNFENSFKEADYHMPCFGQRLNVSSFEWWFHVYTDTY-LKTMLDYDMPEELITDKMDEIADELYYEIMVGPEAFEPVPHVKVVLDTLAGWRDNGGPKLAVVANSDERLNVTLENLGLLPYFDFVLTSQEACTKVNEVDLYDRALEMAGVDDPAKAIHFGSDYDLDVVGPSKAGWETCLVKPRQPDYEQPGEIYQYHRLMRISEILHR 1239
L+T+ L +PVG + A +A+G + +P E +F + P +G +SS +WW V +T+ L + D + + +A++LY + P+ +E VP +L W G +AVV+NSD R+ L LL YF FVLTS+E + ++ AL A V+ P A H G Y D + KAG + L K E E+ + H L + ++ R
Sbjct: 6 LLTWDVKDTLLRLRVPVGQSY-SAEAQAFGLQ--VPA-EALNHSFSQAHTSHSQRFPNYGFSQGLSSKQWWLGVVLETFQLAGIHD--------SGVLWPVAEKLYRDYS-SPKNWELVPGAIEMLQ----WCQQQGIPMAVVSNSDRRVQEILSRCNLLQYFQFVLTSEEVGFAKPDRRIFLEALRSAKVE-PQLAAHVGDHYVNDYLAARKAGLHSFLFKMAGGPIESNMEVPENHLLSSLLDLQAR 236
BLAST of mRNA_F-serratus_M_contig1326.2423.1 vs. uniprot
Match: A0A3Q1GNT7_9TELE (Haloacid dehalogenase-like hydrolase domain-containing protein 3 n=1 Tax=Acanthochromis polyacanthus TaxID=80966 RepID=A0A3Q1GNT7_9TELE) HSP 1 Score: 75.1 bits (183), Expect = 3.120e-11 Identity = 69/232 (29.74%), Postives = 101/232 (43.53%), Query Frame = 1
Query: 559 RDALGRAYGHRHRLPGPERFAFNFENSFKEADYHM----PCFGQRLNVSSFEWWFHVYTDTYLKTMLDYDMPEELITDKMDEIADELYYEIMVGPEAFEPVPHVKVVLDTLAGWRDNGGPKLAVVANSDERLNVTLENLGLLPYFDFVLTSQEACTKVNEVDLYDRALEMAGVDDPAKAI-HFGSDYDLDVVGPSKAGWETCLVKPRQPDYEQPGEIYQYHRLMRISEILHR 1239
R ++G Y G + +F++A H P +G ++ WW V DT + + P L T +A LY+ E +E P K L++ + G KL VV+N D RL L GLL YF F++TS+EA ++D+AL+ GV PA +I H G Y D + G L+ R + QP +I Q HRL + E+ R
Sbjct: 20 RTSVGEQYCREAERMGLSLNPVEVDTAFRQAYRHYSSKYPNYGVTQGLNGKTWWMGVVRDTLSQCRVQ--EPALLNT-----VAHNLYHHFS-SAENWEVFPDSKKALESCSSL----GLKLGVVSNFDNRLEAILRGCGLLSYFSFLITSEEAGVAKPSPAIFDQALQKCGV--PADSIAHVGDHYVKDYLTSRSVGIHGFLLD-RHNKHNQP-DIPQEHRLGSLEELPSR 235 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1326.2423.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1326.2423.1 >prot_F-serratus_M_contig1326.2423.1 ID=prot_F-serratus_M_contig1326.2423.1|Name=mRNA_F-serratus_M_contig1326.2423.1|organism=Fucus serratus male|type=polypeptide|length=389bp MSEGEFEVSYGGQPSARRAIEEFEREERSRIHLATARRVLRYNLVQQQTKback to top mRNA from alignment at F-serratus_M_contig1326:169588..177864- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1326.2423.1 ID=mRNA_F-serratus_M_contig1326.2423.1|Name=mRNA_F-serratus_M_contig1326.2423.1|organism=Fucus serratus male|type=mRNA|length=8277bp|location=Sequence derived from alignment at F-serratus_M_contig1326:169588..177864- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1326:169588..177864- >mRNA_F-serratus_M_contig1326.2423.1 ID=mRNA_F-serratus_M_contig1326.2423.1|Name=mRNA_F-serratus_M_contig1326.2423.1|organism=Fucus serratus male|type=CDS|length=2334bp|location=Sequence derived from alignment at F-serratus_M_contig1326:169588..177864- (Fucus serratus male)back to top |