mRNA_F-serratus_M_contig1320.2396.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1320.2396.1 vs. uniprot
Match: D8LB55_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB55_ECTSI) HSP 1 Score: 466 bits (1198), Expect = 2.630e-155 Identity = 242/327 (74.01%), Postives = 271/327 (82.87%), Query Frame = 2
Query: 788 LPAQGRKPQSSLENRDDLCEAAGANLLVHTPEILNWLKTVKPDEPLVVGSYAYLDGELHVRLSLAMDAIVKGLIETRSKVTPAYLCTPTDVHVIPEAAHAAAEKQAYSLGLTNVLCRATCNLALSLKSNVKPPVVSTDGSTFYLVDGLVSKQGPNYALAKRMQHWRAVVAREVYRCTVSSNIAPSTATASVVSNKLFALAYVGMKNFKPVEVFQQETSNAVMGALLLRDVNDAATPSNPILPIKNPLQLFSYGAFHGGVWRMAFTMDSIGTASVLACLLEYLLKFLGCVLLLAMVVFLVLKAKDGENPIIAIEG-------LLKGEL 1747
P + KPQ+SL +R++LC AAGANLL HTPEILNWLKTV P++PLVVGSYAYLDGELHVRLSLAMDAIVKGL E+R V PAYLCTPTDVHVIP AAH AA QA SLGL N+LC+ T NLA++L SNVKP VV DG + YLVDGLV+KQGPNYALAKRMQHWRAVVAR+ YRC VSSNIAPSTATASVVSN+LFA+AY GM F+P+EVFQQETSNAVMGALLLRDV D ATPSNP LP+KNPLQLFS+G+FHGGVWRMA+T+DSIGTASVLA LL LL L LL +V F +KAKDGENP+ A++G L KGEL
Sbjct: 233 FPLKAGKPQASLSSREELCAAAGANLLAHTPEILNWLKTVSPEKPLVVGSYAYLDGELHVRLSLAMDAIVKGLTESRRDVMPAYLCTPTDVHVIPSAAHDAAASQARSLGLVNLLCKLTGNLAMTLTSNVKPAVVGADGGSLYLVDGLVNKQGPNYALAKRMQHWRAVVARQEYRCKVSSNIAPSTATASVVSNRLFAMAYGGMHFFQPMEVFQQETSNAVMGALLLRDVADPATPSNPTLPLKNPLQLFSFGSFHGGVWRMAYTIDSIGTASVLAYLLVGLLSLLKYFLLAFVVGFAAMKAKDGENPLEALDGVKDSVLGLFKGEL 559
BLAST of mRNA_F-serratus_M_contig1320.2396.1 vs. uniprot
Match: W7TMF0_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMF0_9STRA) HSP 1 Score: 308 bits (790), Expect = 9.570e-94 Identity = 161/268 (60.07%), Postives = 196/268 (73.13%), Query Frame = 2
Query: 803 RKPQSSLENRDDLCEAAGANLLVHTPEILNWLKTVKPDEPLVVGSYAYLDGELHVRLSLAMDAIVKGLIETRSKVTPAYLCTPTDVHVIPEAAHAAAEKQAYSLGLTNVLCRATC-NLALS--LKSNVKPPVVSTDGSTFYLVDGLVSKQGPNYALAKRMQHWRAVVAREVYRCTVSSNIAPSTATASVVSNKLFALAYVGMKNFKPVEVFQQETSNAVMGALLLRDVNDAATPSNPILPIKNPLQLFSYGAFHGGVWRMAFTMDSIG 1597
+K QS+L+ ++ AG NL TPE+ WL V+ + LVVG+YAYLDGELHV++SLAMDAI++ L R K TPAYLCTPTDVHVI + AH AA Q L L N++C+ + NL S L N PPV + DG Y VDG+V +QGPNYALAKR+QHWRAVVAREV + VSSNIAPSTAT SV SNKLFALAY G FKP+EVFQQETSNAVM A+L+ D+ + PSNP I+NPL+LF+YG+ HGG+WRMA+ +DSIG
Sbjct: 274 KKKQSTLKTDPEVAAQAGGNLFTDTPELRAWLMGVETGKDLVVGAYAYLDGELHVKVSLAMDAIIRDLTRLR-KATPAYLCTPTDVHVISKEAHDAAAAQHCELSLVNLVCKLSLFNLPGSGYLVKNALPPVRAEDGEEIYFVDGIVGRQGPNYALAKRIQHWRAVVAREVDKVNVSSNIAPSTATVSVTSNKLFALAYKGFHFFKPLEVFQQETSNAVMAAMLIHDIRNPNVPSNPKNKIRNPLELFTYGSLHGGIWRMAYKIDSIG 540
BLAST of mRNA_F-serratus_M_contig1320.2396.1 vs. uniprot
Match: A0A835Z6A9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6A9_9STRA) HSP 1 Score: 301 bits (770), Expect = 2.000e-91 Identity = 168/281 (59.79%), Postives = 199/281 (70.82%), Query Frame = 2
Query: 833 DDLCEAAGANLLVHTPEILNWLKTVKPDEPLVVGSYAYLDGELHVRLSLAMDAIVKGLIETRSK---VTPAYLCTPTDVHVIPEAAHAAAEKQ--------AYSLGLTNVLCRATCNLALSLKSNVKPPVVSTDGSTFYLVDGLVSKQGPNYALAKRMQHWRAVVAREVYRCTVSSNIAPSTATASVVSNKLFALAYVGMKNFKPVEVFQQETSNAVMGALLLRDVNDA-ATPSNPILPIKNPLQLFSYGAFHGGVWRMAFTMDSIGTASVLACLLEYLLK 1639
+ + AG NLL TPEIL+WL++ +PLVVG+YAYLDGELHVR+SLAMDAI+KGL E ++ VTPAYLCTPTD+HV A AAA K A L LT + + VK P T+YLVDGLV++QGPNYALAKRMQHWRAVVAR C VSSNIAPSTATASV N+LFA+AY GM F+P+EVFQQETSNAVMGALLLRDV+D A ++P +P+ PLQ+FS+GAFHGGVWR+ F MD+IG AS+L LL LLK
Sbjct: 247 EQIAGVAGCNLLTETPEILDWLRSTHAGKPLVVGAYAYLDGELHVRVSLAMDAIIKGLTEDKAAHPAVTPAYLCTPTDIHVSTADARAAAAKNYSPLSSPFAALLRLTPLFWFGPLRPNFGGRLTVKGPE-----ETYYLVDGLVNRQGPNYALAKRMQHWRAVVARARGGCAVSSNIAPSTATASVTHNRLFAMAYGGMHWFRPMEVFQQETSNAVMGALLLRDVSDRRAKGASPAVPLSTPLQIFSFGAFHGGVWRLGFKMDTIGEASILMYLLVKLLK 522
BLAST of mRNA_F-serratus_M_contig1320.2396.1 vs. uniprot
Match: A0A7R9W5N8_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W5N8_9STRA) HSP 1 Score: 270 bits (691), Expect = 2.880e-82 Identity = 142/276 (51.45%), Postives = 184/276 (66.67%), Query Frame = 2
Query: 803 RKPQSSLENRDDLCEAAGANLLVHTPEILNWLKTVKPDEPLVVGSYAYLDGELHVRLSLAMDAIVKGLIETRSKVTPAYLCTPTDVHVIPEAAHAAAEKQAYSLG------LTNVLCRATCNLALSLKSNVKPPVVSTDGSTFYLVDGLVSKQGPNYALAKRMQHWRAVVAREVYRCTVSSNIAPSTATASVVSNKLFALAYVGMKNFKPVEVFQQETSNAVMGALLLRDVNDAATPSNPILPIKNPLQLFSYGAFHGGVWRMAFTMDSIGTASVL 1612
+ QS+L+ D+L +AG NL TP I +WL + P + VGSYAYLDG LHV++SLAMDAI + L E R + YLCTPTD+H++P+ AH AAE + + L +L R C L+ N + PV G +Y+++G+ QGPNY LAKR+QHWRA+VAR V CTVSSNIAP+T+T SVV N+ FA AY GM FKP E+F ++S AVM A+LLRD+ND + +NP + NP QLFSYG+FHGG WR A+ +DSIG ASVL
Sbjct: 48 KSEQSTLKTDDELYASAGCNLFTQTPAIRDWLLDLYPGKKFTVGSYAYLDGALHVQVSLAMDAICRDLSEKRKDTSLVYLCTPTDLHLVPKEAHDAAEAEYKNYSGRLFCMLMRLLSRGKC-----LRKNARKPVPGKGGD-YYMINGISVAQGPNYILAKRLQHWRAIVARSVAGCTVSSNIAPATSTVSVVHNRTFAWAYEGMPYFKPYEIFAPDSSKAVMLAILLRDLNDPKSVANPKTELGNPNQLFSYGSFHGGTWRCAYEVDSIGEASVL 317
BLAST of mRNA_F-serratus_M_contig1320.2396.1 vs. uniprot
Match: A0A7S2U7B5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7B5_9STRA) HSP 1 Score: 263 bits (672), Expect = 4.190e-79 Identity = 144/276 (52.17%), Postives = 182/276 (65.94%), Query Frame = 2
Query: 806 KPQSSLENRDDLCEAAGANLLVHTPEILNWLKTVKPDEPLVVGSYAYLDGELHVRLSLAMDAIVKGLIETRSKVTPAYLCTPTDVHVIPEAAHAAA-------EKQAYSLGLTNVLCRATCNLALSLKSNVKPPVVSTDGSTFYLVDGLVSKQGPNYALAKRMQHWRAVVAREVYRCTVSSNIAPSTATASVVSNKLFALAYVGMKNFKPVEVFQQETSNAVMGALLLRDVNDAATPSNPILPIKNPLQLFSYGAFHGGVWRMAFTMDSIGTASVL 1612
KPQ ++ D LC +G NL P I +WL + P +P VGSYAYL+G LHV++SLAMDAI + L E R + AYLCTPTD+H+ P+ A+ A+ K+ Y + L N+L L+ N + P+ S +G +Y+V+G+ QGPNYALAKRMQHWRA+VAR C VSSNIAPST+TASVV NK FA AY GM F P E+F ETSNAVM A+L D+ND ++ +NP I NP QLF YG+FHGG WR A+ +DSIG ASVL
Sbjct: 76 KPQKDCKDDDALCSVSGCNLFTQAPLIRDWLLNLYPGKPFTVGSYAYLNGALHVQVSLAMDAICRDLSEKRPGTSLAYLCTPTDLHLCPKEAYDASLEHYSNFSKKPYCI-LMNLLSGGKF-----LRKNARKPM-SGEGGDYYVVNGISVAQGPNYALAKRMQHWRAIVARG-NGCIVSSNIAPSTSTASVVQNKTFAWAYEGMPYFTPYEIFAPETSNAVMSAILFSDLNDKSSNANPAKKINNPNQLFEYGSFHGGTWRCAYEVDSIGEASVL 343
BLAST of mRNA_F-serratus_M_contig1320.2396.1 vs. uniprot
Match: A0A7S0JI55_9EUKA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JI55_9EUKA) HSP 1 Score: 263 bits (673), Expect = 8.750e-78 Identity = 145/283 (51.24%), Postives = 183/283 (64.66%), Query Frame = 2
Query: 788 LPAQGRKPQSSLENRDDLCEAAGANLLVHTPEILNWLKTVKPDEPLVVGSYAYLDGELHVRLSLAMDAIVKGLIETRSKVTPAYLCTPTDVHVIPEAAHAAAEKQAYSLGLTNVLCRATCNLALSLKSNVKPPVVSTDGSTFYLVDGLVSKQGPNYALAKRMQHWRAVVAREVYRCTVSSNIAPSTATASVVSNKLFALAYVGMKNFKPVEVFQQETSNAVMGALLLRDVNDAATPSNPILPIKNPLQLFSYGAFHGGVWRMAFTMDSIGTASVLACLLEYLL 1636
P +G + SL + DL AAG NL TPEI NWL V P + L VG YAYL G+L R++LAMD +++ L E R K + A+LCTPTD H++P AA+ AA++ L L + +K N++ PV + G T Y+ D LV QGPNYALAKRMQHWR ++ARE C +SSN+APST TASV NK FA AY M NFKP E+ ETSNAVM ALL+ D+N+ P NP +P+ NP Q+FS+GAFHGG WR A+T DSIG SVL ++ LL
Sbjct: 4 FPLRGGCERGSLSDT-DLYAAAGCNLFTQTPEIKNWLTCVHPGKQLCVGGYAYLVGDLFPRVALAMDVLIQELTEKR-KASVAFLCTPTDCHLVPPAAYTAAKQNHAKAPLWQRLLTVLSMGKMCVK-NMRKPVTTLSGQTLYVCDALVGPQGPNYALAKRMQHWRCMIAREG-GCIISSNVAPSTRTASVTQNKNFAYAYAMMHNFKPYEIPGPETSNAVMTALLIHDLNNPMHPGNPQMPLANPQQIFSHGAFHGGTWRCAYTYDSIGVPSVLLYYIQNLL 282
BLAST of mRNA_F-serratus_M_contig1320.2396.1 vs. uniprot
Match: A0A7S2SGL6_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGL6_9STRA) HSP 1 Score: 267 bits (683), Expect = 1.220e-76 Identity = 144/272 (52.94%), Postives = 179/272 (65.81%), Query Frame = 2
Query: 827 NRDDLCEAAGANLLVHTPEILNWLKTVKPDEPLVVGSYAYLDGELHVRLSLAMDAIVKGLIETRSKVTPAYLCTPTDVHVIPEAAHAAAEKQAYSLGLTNVLCRATCNLALSLKSNVKPPVVSTDGSTFYLVDGLVSKQGPNYALAKRMQHWRAVVAREVYRCTVSSNIAPSTATASVVSNKLFALAYVGMKNFKPVEVFQQETSNAVMGALLLRDVNDAATPSNPILPIKNPLQLFSYGAFHGGVWRMAFTMDSIGTASVLACLLEYLLKF 1642
+ DDL +GANLL HTPEI NWL V P++ + VG+Y YLDG LHV+LSLA DAI+ L RS++ A+LCTPTD H IP+AAH AA + + L L + +++ P + G YLVDG+V+ QGPNY LAKR+QHWRA++ R +SSNIAPSTATASVV N FA AY GM F+P+EV QETSNA+MGALLL DV + NP +P+ NPL++F YG+FHGGVWR F M +IG S LA Y LKF
Sbjct: 462 SEDDLAAVSGANLLQHTPEIANWLCQVCPEKKITVGNYTYLDGALHVQLSLACDAIIAKLAAVRSELAIAFLCTPTDCHPIPKAAHDAARAKRAAAPFWQKLS------PLLVGNDIAPVTEKSSGDQIYLVDGVVAAQGPNYILAKRIQHWRAIIERSRGH-VISSNIAPSTATASVVHNPQFAAAYGGMHLFQPLEVMFQETSNAIMGALLLHDVQNERAAGNPKVPLSNPLRMFEYGSFHGGVWRCGFKMGTIGEMSALA----YYLKF 722
BLAST of mRNA_F-serratus_M_contig1320.2396.1 vs. uniprot
Match: A0A7S0TD09_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0TD09_9STRA) HSP 1 Score: 266 bits (681), Expect = 2.800e-76 Identity = 144/272 (52.94%), Postives = 185/272 (68.01%), Query Frame = 2
Query: 803 RKPQSSLENRDDLCEAAGANLLVHTPEILNWLKTVKPDEPLVVGSYAYLDGELHVRLSLAMDAIVKGLIETRSKVTPAYLCTPTDVHVIPEAAHAAAEKQAYSLGLTNVLCRATCNLALS--LKSNVKPPVVSTDGSTFYLVDGLVSKQGPNYALAKRMQHWRAVVAREVYRCTVSSNIAPSTATASVVSNKLFALAYVGMKNFKPVEVFQQETSNAVMGALLLRDVNDAATPSNPILPIKNPLQLFSYGAFHGGVWRMAFTMDSIGTASVL 1612
++ QS+L++ D+L +AG NL HTP I +WL ++ P + VGSYAYL+G LHV++S+AMDAI + L E RS + AYLCTPTD+H++P+ A A+ Y + +LC L+ LK N K PV S DG FY+++G+ QGPNY LAKR+QHWRAV+AR C VSSNIAP+T+T SV N+ FA AY GM FKP E+F ETSNAVM A+L D+NDA S+P +KNP QLFS G+FHGG WR AF +DSIG SVL
Sbjct: 469 KQDQSTLKSDDELYASAGCNLFTHTPMIRDWLMSLYPGKSFTVGSYAYLNGALHVQVSIAMDAITRDLSEKRSGTSLAYLCTPTDLHLVPKEAWDASVAN-YKIYCKRILCTFVRILSSRRLLKKNAKNPV-SGDGGDFYMINGVSVAQGPNYILAKRLQHWRAVIARSK-GCIVSSNIAPATSTVSVTQNRTFAWAYEGMPYFKPYEIFAPETSNAVMSAILFSDLNDAKRFSSPKTSLKNPNQLFSEGSFHGGNWRCAFEVDSIGETSVL 737
BLAST of mRNA_F-serratus_M_contig1320.2396.1 vs. uniprot
Match: A0A7S1V224_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V224_9STRA) HSP 1 Score: 260 bits (664), Expect = 3.350e-76 Identity = 140/285 (49.12%), Postives = 184/285 (64.56%), Query Frame = 2
Query: 806 KPQSSLENRDDLCEAAGANLLVHTPEILNWLKTVKPDEPLVVGSYAYLDGELHVRLSLAMDAIVKGLIETRSKVTPAYLCTPTDVHVIPEAAHAAAEKQAYSLGLTNVLCRATCNLALS--LKSNVKPPVVSTDGSTFYLVDGLVSKQGPNYALAKRMQHWRAVVAREVYRCTVSSNIAPSTATASVVSNKLFALAYVGMKNFKPVEVFQQETSNAVMGALLLRDVNDAATPSNPILPIKNPLQLFSYGAFHGGVWRMAFTMDSIGTASVLACLLEYLLKFLGCV 1654
K Q + ++ +++ + AG+NL TP I +WL + P +P VG YAYLDG LHV++SLAMDAI K L E RS + AYLCTPTD+H IP+ A+ A+E Y + C ++ L+ N + P+ G FY+V+G+ QGPNYALAKRMQHWRA++AR C VSSNIAP+T+T SVV N+ FA AY GM FKP E+F TSNAVM ALLL D+N+ + NP + + NP QLF + +FHGG WR A+ +DSIG ASVL L ++G V
Sbjct: 218 KEQKTCKSEEEIYDVAGSNLFTQTPLIRDWLLNLYPSKPFTVGCYAYLDGALHVQVSLAMDAICKDLSEKRSGTSLAYLCTPTDLHFIPKEANEASESY-YKDYSKRLFCMVMHLMSPKKFLRKNARKPIEG-QGGPFYIVNGISVAQGPNYALAKRMQHWRAIIARSK-GCIVSSNIAPATSTVSVVHNRTFAWAYEGMPYFKPYEIFAPATSNAVMSALLLNDLNNPKSAGNPKVSLANPNQLFQFTSFHGGTWRCAYEVDSIGEASVLIYFSRVALPYVGAV 499
BLAST of mRNA_F-serratus_M_contig1320.2396.1 vs. uniprot
Match: A0A1Z5JSJ0_FISSO (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSJ0_FISSO) HSP 1 Score: 265 bits (677), Expect = 7.250e-76 Identity = 146/271 (53.87%), Postives = 182/271 (67.16%), Query Frame = 2
Query: 821 LENRDDLCEAAGANLLVHTPEILNWLKTVKPDEPLVVGSYAYLDGELHVRLSLAMDAIVKGLIETRSKVTPAYLCTPTDVHVIPEAAHAAA-------EKQAYSLGLTNVLCRATCNLALSLKSNVKPPVVSTDGSTFYLVDGLVSKQGPNYALAKRMQHWRAVVAREVYRCTVSSNIAPSTATASVVSNKLFALAYVGMKNFKPVEVFQQETSNAVMGALLLRDVNDAATPSNPILPIKNPLQLFSYGAFHGGVWRMAFTMDSIGTASVL 1612
++N D LCE AG NL +TP I +WL + P + VGSYAYLDG LHV++SLAMDAI + L E R + AYLCTPTD+H+IP+ AH AA K+ Y + L+ + L+SNVK PV S G +YLV+G+ QGPNYALAKRMQHWRA++AR C VSSNIAPST+T SVV N+ FA AY GM FKP E+ + S AVM ALL D+ND ++ +NP + NP QLFSYG+FHGG+WR A+ +DSIG ASVL
Sbjct: 454 VKNEDALCERAGCNLFTNTPLIRDWLLDLYPGKSFTVGSYAYLDGALHVQVSLAMDAITRDLTEKRKNTSLAYLCTPTDLHLIPKEAHDAAAANLKEFSKKPYCMFLSLL------GGGKFLRSNVKKPV-SGKGGDYYLVNGISVAQGPNYALAKRMQHWRAIIARSK-GCIVSSNIAPSTSTVSVVHNRTFAWAYEGMPYFKPFEIATPDLSKAVMLALLAYDLNDPSSAANPKTALSNPNQLFSYGSFHGGLWRCAYEVDSIGEASVL 716 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1320.2396.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1320.2396.1 >prot_F-serratus_M_contig1320.2396.1 ID=prot_F-serratus_M_contig1320.2396.1|Name=mRNA_F-serratus_M_contig1320.2396.1|organism=Fucus serratus male|type=polypeptide|length=383bp MGEGTMARPERQLLCPAGRWVRHGSLEAAARAGCQHRRHRLGPPQDLGASback to top mRNA from alignment at F-serratus_M_contig1320:8047..17142+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1320.2396.1 ID=mRNA_F-serratus_M_contig1320.2396.1|Name=mRNA_F-serratus_M_contig1320.2396.1|organism=Fucus serratus male|type=mRNA|length=9096bp|location=Sequence derived from alignment at F-serratus_M_contig1320:8047..17142+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1320:8047..17142+ >mRNA_F-serratus_M_contig1320.2396.1 ID=mRNA_F-serratus_M_contig1320.2396.1|Name=mRNA_F-serratus_M_contig1320.2396.1|organism=Fucus serratus male|type=CDS|length=2298bp|location=Sequence derived from alignment at F-serratus_M_contig1320:8047..17142+ (Fucus serratus male)back to top |