|
|
Homology
BLAST of mRNA_F-serratus_M_contig1.18.1 vs. uniprot
Match: A0A6H5KZD5_9PHAE (RF_PROK_I domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZD5_9PHAE) HSP 1 Score: 619 bits (1595), Expect = 6.200e-216 Identity = 330/452 (73.01%), Postives = 371/452 (82.08%), Query Frame = 3
Query: 24 MGYVSSKTRLACLSCLIVAASCFLSPSPYILRGIDVLVATSLDSMEYSCSKPQRPKITG-----RRPCQGAWRG-RPLRMALDEFVLDQLSGIERTFNELTERLGDPDILGDSKLLVEVSQERAGVEEVVQCYTTYTKAMEDLELAKEFFAESSGSGGDAEMKEMAREEIRGLEAQLMELETRMKLLLLPTDPNDSRNVMLEIRAGTGGDEAAIWAGDLLGVYRKYASEQGWSLKIVDETPAETGGFKTVIAEINGDKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDDVTVEIRNEDIDLKTARSGGAGGQNVNKVESAVDLIHRPTGIRIFCTQERSQLKNRETAMKLLRSKLYEIELEKQLAETSGNRKSQVGSGARSEKIRTYNWKDSRCSDHRIGKNFPLPSFLSGSGLDDMIGACILLDQQEMMAELAEKQRKGQE 1361
M RL CLSC + A F+ Y L + L + S+ Q G RRP + RG R L MALD+FVL+QLSGI+RTFNELTERLGDPD+L + KL++EVSQERA VEE+V CY YTKA EDLE AKE F ESSG+GGDAEMKEMAREEIR LE + LET+MKLLLLPTDPND+RNVMLEIRAGTGGDEAA+WA +LLGVY+KYA EQGWSLK+++ E GGF+TVIAE++GDKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVA+MPEVD+V V IR EDI++KTARSGG+GGQNVNKVESAVDL H+PTGIRIFCTQERSQLKNRE AMKLLRS++Y+IELEKQ AETSGNRK+QVGSG+RSEKIRTYNWKDSRCSDHRIGKNFPL +FLSGSGLDDMIGACILLDQQE+MAELA KQR+GQE
Sbjct: 1 MSSTRRSARLLCLSCALAEALGFI----YSLPKVHQL------RRQQQRSQQQHQHQLGAMGSQRRPAATSSRGSRALGMALDDFVLEQLSGIDRTFNELTERLGDPDVLANPKLIMEVSQERASVEEIVNCYAEYTKAAEDLEGAKEMFTESSGAGGDAEMKEMAREEIRDLEEVMEALETKMKLLLLPTDPNDNRNVMLEIRAGTGGDEAALWAAELLGVYKKYALEQGWSLKVIESAMVEAGGFRTVIAEVSGDKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEVAVNIRPEDIEIKTARSGGSGGQNVNKVESAVDLFHKPTGIRIFCTQERSQLKNREVAMKLLRSRVYDIELEKQQAETSGNRKAQVGSGSRSEKIRTYNWKDSRCSDHRIGKNFPLNNFLSGSGLDDMIGACILLDQQELMAELAAKQRQGQE 442
BLAST of mRNA_F-serratus_M_contig1.18.1 vs. uniprot
Match: A0A836CKN4_9STRA (Peptide chain release factor 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKN4_9STRA) HSP 1 Score: 516 bits (1330), Expect = 4.810e-177 Identity = 262/371 (70.62%), Postives = 316/371 (85.18%), Query Frame = 3
Query: 243 MALDEFVLDQLSGIERTFNELTERLGDPDILGDSKLLVEVSQERAGVEEVVQCYTTYTKAMEDLELAKEFFAESSGSGGDAEMKEMAREEIRGLEAQLMELETRMKLLLLPTDPNDSRNVMLEIRAGTGGDEAAIWAGDLLGVYRKYASEQGWSLKIVDETPAETGGFKTVIAEINGDKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDDVTVEIRNEDIDLKTARSGGAGGQNVNKVESAVDLIHRPTGIRIFCTQERSQLKNRETAMKLLRSKLYEIELEKQLAETSGNRKSQVGSGARSEKIRTYNWKDSRCSDHRIGKNFPLPSFLSGSGLDDMIGACILLDQQEMMAELAEKQRKG 1355
MALD+FV+ QL GIER++NE+TERLGDPD+L DSK L+E+S++RA +E VV + Y A+ L A E F ES+G DAE++EMAREE+R LEA++ +E +KL+LLPTDPND RNVMLEIRAGTGGDEAAIWAGDLL VYRKYA+E GW+L++V+E A+ GGFK+++AE+ GD VYSKLKYEAGVHRVQRVPATE+QGRVHTSTATVAVMPEVD+VTV I DID+ TAR+GG+GGQNVNKVE+AVDL H+PTGIRIFC QERSQLKN+E AM +LRS+LYEIELEKQ A SGNR++QVGSGARSEKIRTYNWKDSRCSDHRI +N+PL +FLSG+ +DDMI ACI++DQQE + E+A KQ +G
Sbjct: 1 MALDDFVVRQLGGIERSYNEMTERLGDPDVLADSKKLMEISKDRAKMEGVVTMFGEYKDALAQLGGATEMFQESAG---DAELREMAREEMRDLEARMERMEVDLKLMLLPTDPNDERNVMLEIRAGTGGDEAAIWAGDLLNVYRKYATEMGWTLRVVEEAAADMGGFKSIVAEVRGDAVYSKLKYEAGVHRVQRVPATESQGRVHTSTATVAVMPEVDEVTVRIDPGDIDMHTARAGGSGGQNVNKVETAVDLFHKPTGIRIFCQQERSQLKNKELAMSILRSRLYEIELEKQQAAVSGNRRAQVGSGARSEKIRTYNWKDSRCSDHRINRNWPLDTFLSGT-IDDMIAACIVMDQQEQLQEMARKQAQG 367
BLAST of mRNA_F-serratus_M_contig1.18.1 vs. uniprot
Match: A0A6S9M8F3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9M8F3_HETAK) HSP 1 Score: 477 bits (1227), Expect = 9.750e-161 Identity = 246/389 (63.24%), Postives = 309/389 (79.43%), Query Frame = 3
Query: 180 QRPKITGRRPCQGAWRGRPLRMALDEFVLDQLSGIERTFNELTERLGDPDILGDSKLLVEVSQERAGVEEVVQCYTTYTKAMEDLELAKEFFAESSGSGGDAEMKEMAREEIRGLEAQLMELETRMKLLLLPTDPNDSRNVMLEIRAGTGGDEAAIWAGDLLGVYRKYASEQGWSLKIVDETPAETGGFKTVIAEINGDKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDDVTVEIRNEDIDLKTARSGGAGGQNVNKVESAVDLIHRPTGIRIFCTQERSQLKNRETAMKLLRSKLYEIELEKQLAETSGNRKSQVGSGARSEKIRTYNWKDSRCSDHRIGKNFPLPSFLSGSGLDDMIGACILLDQQEMMAELAEKQ 1346
Q P+++ P G L+MA+ ++ D+L GIE+TFN+LT L DPD+L DSK L+++S+ER+ +EE+V+ + Y DL AKE F+ES+G D EM+EMAR+EI E + EL+ ++K+LLLPTDPND RN MLEIRAGTGGDEA IWAGDL+ VY+KYA QGW+ +++E+ A+ GG K+ E+ G+ VYSKLKYEAGVHRVQRVPATETQGRVHTSTATVA+MPEVD+VTV+I +DI+L TARSGGAGGQNVNKVE+A DL H+PTGIRIFCTQERSQLKN+E AM LLR++LYE+ELEKQ +E SG R++QVG+GARSEKIRTYNWKDSRCSDHRIG+NFPL FL G +DD+I A I+ DQQ+ + E+AE+Q
Sbjct: 29 QSPQLSFPHPVARKTSG-GLKMAIPSYMQDKLKGIEQTFNQLTNSLADPDVLNDSKQLMKISKERSKLEEIVEAFQEYKSREADLTGAKELFSESAG---DPEMREMARDEIDECETVMDELQEKLKILLLPTDPNDERNCMLEIRAGTGGDEAGIWAGDLVEVYKKYAQTQGWACTLIEESAADMGGVKSCTLEVRGEAVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEVTVKIDPKDIELTTARSGGAGGQNVNKVETAADLFHKPTGIRIFCTQERSQLKNKEMAMNLLRARLYEMELEKQRSEVSGARRAQVGTGARSEKIRTYNWKDSRCSDHRIGQNFPLQMFLDGK-VDDIIQALIVSDQQDQLKEMAEEQ 412
BLAST of mRNA_F-serratus_M_contig1.18.1 vs. uniprot
Match: A0A448Z911_9STRA (RF_PROK_I domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z911_9STRA) HSP 1 Score: 460 bits (1183), Expect = 3.110e-154 Identity = 239/381 (62.73%), Postives = 296/381 (77.69%), Query Frame = 3
Query: 204 RPCQGAWRGRPLRM-ALDEFVLDQLSGIERTFNELTERLGDPDILGDSKLLVEVSQERAGVEEVVQCYTTYTKAMEDLELAKEFFAESSGSGGDAEMKEMAREEIRGLEAQLMELETRMKLLLLPTDPNDSRNVMLEIRAGTGGDEAAIWAGDLLGVYRKYASEQGWSLKIVDETPAETGGFKTVIAEINGDKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDDVTVEIRNEDIDLKTARSGGAGGQNVNKVESAVDLIHRPTGIRIFCTQERSQLKNRETAMKLLRSKLYEIELEKQLAETSGNRKSQVGSGARSEKIRTYNWKDSRCSDHRIGKNFPLPSFLSGSGLDDMIGACILLDQQEMMAELAEK 1343
RP +WR + ALDE ++ +L I+R++N LTERLGDPD+LGDSKLL +V +RA EEVV Y YT +E+LE AKE F ++ G D EMKEMAR E++ +E +L +E ++K+LLLP DPND RNVMLEIRAGTGG EA+I+ GDLL VYRKY S QGWS I+DE+ + GG+K ++ E+ GDKVYSKLK+EAGVHRVQRVPATE+ GRVHTSTATVA+MPE D+V + I +DI++ T RSGGAGGQNVNKVE+AVDL+H+PTGIRI CTQERSQLKN+E AMK+L SKLY++E EK+ E R SQVG+G RSEKIRTYNWKDSRCSDHRI +N+PL FL G +D +IGA I+ DQ+E + ELAE+
Sbjct: 28 RPAAASWRNTNTALGALDEGMMGRLENIKRSYNALTERLGDPDVLGDSKLLQKVMSDRASSEEVVLAYDEYTGLLEELEGAKELFQDA---GDDPEMKEMARAEMKEIEPKLEPIEDKIKILLLPKDPNDDRNVMLEIRAGTGGSEASIFVGDLLDVYRKYISSQGWSANIIDESTGDDGGYKNIVMEVKGDKVYSKLKWEAGVHRVQRVPATESAGRVHTSTATVAIMPECDEVDINIDKKDIEISTMRSGGAGGQNVNKVETAVDLLHKPTGIRIKCTQERSQLKNKELAMKMLMSKLYDLENEKRDMEERARRGSQVGTGGRSEKIRTYNWKDSRCSDHRIQQNYPLNQFLGGD-IDPIIGAMIMKDQEEKLKELAEQ 404
BLAST of mRNA_F-serratus_M_contig1.18.1 vs. uniprot
Match: A0A140ECK3_9STRA (Plastid peptide chain release factor 1 n=1 Tax=Monodopsis sp. MarTras21 TaxID=1745953 RepID=A0A140ECK3_9STRA) HSP 1 Score: 458 bits (1179), Expect = 1.480e-153 Identity = 234/375 (62.40%), Postives = 300/375 (80.00%), Query Frame = 3
Query: 219 AW---RGRPLRMALDEFVLDQLSGIERTFNELTERLGDPDILGDSKLLVEVSQERAGVEEVVQCYTTYTKAMEDLELAKEFFAESSGSGGDAEMKEMAREEIRGLEAQLMELETRMKLLLLPTDPNDSRNVMLEIRAGTGGDEAAIWAGDLLGVYRKYASEQGWSLKIVDETPAETGGFKTVIAEINGDKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDDVTVEIRNEDIDLKTARSGGAGGQNVNKVESAVDLIHRPTGIRIFCTQERSQLKNRETAMKLLRSKLYEIELEKQLAETSGNRKSQVGSGARSEKIRTYNWKDSRCSDHRIGKNFPLPSFLSGSGLDDMIGACILLDQQEMMAEL 1334
AW RGR L MALD FV +L I+RT++ELTERLGDPD++ + L++V+QER +EEVV Y + K ED+ AK+ F E+ G D E+KEMAR EI+ LEAQ E+E R+ +L+LP DP D RNVMLEIRAGTGG EA ++AG+L+ VY +YA+ QGW +++++++ + GG+K + EI GDKVYSKLK+EAGVHRVQRVPATETQGRVHTSTATVA+MPEVDDV V+I +DI++ TARSGG+GGQNVNKVE+AVDL+H+PTGIRIFCTQERSQLKN+E AM+LLRS+L+E+E EKQ +G R+SQ+GSG RSEKIRTYNWKDSRC+DHR+G+NFPL +FL G+ L+ + C+L +QQE +AE+
Sbjct: 35 AWVPARGRSLAMALDPFVQSKLDSIKRTYHELTERLGDPDVIANPNSLMQVNQERMKIEEVVLSYQKWQKLGEDMVGAKQLFNEA---GNDVELKEMARAEIKDLEAQQGEIEARLVVLMLPQDPLDDRNVMLEIRAGTGGSEAGLFAGNLVDVYTRYATAQGWRVRVIEDSRNDEGGYKNAVLEIQGDKVYSKLKFEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDDVQVQIDAKDIEMHTARSGGSGGQNVNKVETAVDLLHKPTGIRIFCTQERSQLKNKELAMQLLRSRLFEMEQEKQRESIAGQRRSQIGSGGRSEKIRTYNWKDSRCTDHRLGQNFPLQTFLDGN-LEGITNQCLLQEQQEKLAEM 405
BLAST of mRNA_F-serratus_M_contig1.18.1 vs. uniprot
Match: A0A7S2W3G7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W3G7_9STRA) HSP 1 Score: 456 bits (1173), Expect = 9.030e-153 Identity = 230/369 (62.33%), Postives = 293/369 (79.40%), Query Frame = 3
Query: 240 RMALDEFVLDQLSGIERTFNELTERLGDPDILGDSKLLVEVSQERAGVEEVVQCYTTYTKAMEDLELAKEFFAESSGSGGDAEMKEMAREEIRGLEAQLMELETRMKLLLLPTDPNDSRNVMLEIRAGTGGDEAAIWAGDLLGVYRKYASEQGWSLKIVDETPAETGGFKTVIAEINGDKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDDVTVEIRNEDIDLKTARSGGAGGQNVNKVESAVDLIHRPTGIRIFCTQERSQLKNRETAMKLLRSKLYEIELEKQLAETSGNRKSQVGSGARSEKIRTYNWKDSRCSDHRIGKNFPLPSFLSGSGLDDMIGACILLDQQEMMAELAEKQ 1346
RMA++EF++++L IERTFNELTERLGDPD++ D KL++ ++QER+ +EE V+ Y+ + +L AKE S DAEMKEMA+EE++ LEA + E E ++ +L+LP DPND++NV+LEIRAGTGG EA +WAGDL+ YRKYA +QGW K+++++ + GG K EI+G+ VYSKLKYEAGVHRVQRVPATE+QGRVHTSTATVA+MPEVD+V V I +D+ + TARSGGAGGQNVNKVE+AVDL+H+PTGIRIFCTQERSQLKNRE AMK LRS+LY +ELE Q+AE SGNRKSQ+GSG RSEKIRTYNWKD+RC+DHR+ +N PL S L G + +I CIL DQ+ + E+ E+Q
Sbjct: 38 RMAMNEFMVERLQSIERTFNELTERLGDPDVISDPKLMMSLTQERSSIEETVETYSQWRDMQTELGDAKELVDVSD----DAEMKEMAKEEVQTLEAGITEREDKLMVLILPKDPNDNKNVILEIRAGTGGGEACLWAGDLVSAYRKYADKQGWRFKVLEDSAGDDGGVKNAAYEISGESVYSKLKYEAGVHRVQRVPATESQGRVHTSTATVAIMPEVDEVAVHIDPKDVTITTARSGGAGGQNVNKVETAVDLLHKPTGIRIFCTQERSQLKNRELAMKSLRSRLYAMELEAQMAEISGNRKSQIGSGGRSEKIRTYNWKDNRCTDHRLQQNTPLQSVLDGE-FEALIQQCILKDQESRLEEMMEEQ 401
BLAST of mRNA_F-serratus_M_contig1.18.1 vs. uniprot
Match: A0A140ECJ9_9STRA (Plastid peptide chain release factor 1 n=1 Tax=Vischeria sp. CAUP Q 202 TaxID=1805947 RepID=A0A140ECJ9_9STRA) HSP 1 Score: 453 bits (1166), Expect = 9.570e-152 Identity = 232/366 (63.39%), Postives = 294/366 (80.33%), Query Frame = 3
Query: 237 LRMALDEFVLDQLSGIERTFNELTERLGDPDILGDSKLLVEVSQERAGVEEVVQCYTTYTKAMEDLELAKEFFAESSGSGGDAEMKEMAREEIRGLEAQLMELETRMKLLLLPTDPNDSRNVMLEIRAGTGGDEAAIWAGDLLGVYRKYASEQGWSLKIVDETPAETGGFKTVIAEINGDKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDDVTVEIRNEDIDLKTARSGGAGGQNVNKVESAVDLIHRPTGIRIFCTQERSQLKNRETAMKLLRSKLYEIELEKQLAETSGNRKSQVGSGARSEKIRTYNWKDSRCSDHRIGKNFPLPSFLSGSGLDDMIGACILLDQQEMMAEL 1334
L MAL+ FV +L GIER++ ELTERLGDPD++ + L+ V+QER+ +E VV Y Y K EDL AK+ F E+ D E++EMAR+EI+GLE Q +LE ++ +L+LP DP D RNVMLEIRAGTGGDEA+++AGDL+ VY +YA QGW ++V E ++ GG+K + E++GDKVYSKLK+EAGVHRVQRVPATETQGRVHTSTATVAVMPEVD+V V I +DI++ TARSGG+GGQNVNKVE+AVDL+H+PTGIRIFCTQERSQLKN+E AM++LRSKLYE+E+EKQ+ E +G R+SQ+GSGARSEKIRTYNWKDSRC+DHR+G+NFPL + L G L+D+ C+L +QQE + L
Sbjct: 35 LSMALEPFVKTKLDGIERSYKELTERLGDPDVIKSPQTLMHVNQERSKIEGVVVAYQQYKKNDEDLLGAKQLFNEAGQE--DPELREMARDEIKGLEVQQDDLEKQLMVLMLPKDPMDDRNVMLEIRAGTGGDEASLFAGDLVDVYSRYAQIQGWRSRMVSEARSDDGGYKMAVLEVHGDKVYSKLKFEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEVQVRIDPKDIEMHTARSGGSGGQNVNKVETAVDLLHKPTGIRIFCTQERSQLKNKELAMQILRSKLYEMEVEKQMNEVTGQRRSQIGSGARSEKIRTYNWKDSRCTDHRLGQNFPLQTVLEGK-LEDITNQCLLSEQQEKLEAL 397
BLAST of mRNA_F-serratus_M_contig1.18.1 vs. uniprot
Match: A0A140ECJ7_9STRA (Plastid peptide chain release factor 1 n=1 Tax=Trachydiscus minutus TaxID=1032745 RepID=A0A140ECJ7_9STRA) HSP 1 Score: 454 bits (1167), Expect = 1.600e-151 Identity = 231/377 (61.27%), Postives = 300/377 (79.58%), Query Frame = 3
Query: 216 GAWRGRPLRMALDEFVLDQLSGIERTFNELTERLGDPDILGDSKLLVEVSQERAGVEEVVQCYTTYTKAMEDLELAKEFFAESSGSGGDAEMKEMAREEIRGLEAQLMELETRMKLLLLPTDPNDSRNVMLEIRAGTGGDEAAIWAGDLLGVYRKYASEQGWSLKIVDETPAETGGFKTVIAEINGDKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDDVTVEIRNEDIDLKTARSGGAGGQNVNKVESAVDLIHRPTGIRIFCTQERSQLKNRETAMKLLRSKLYEIELEKQLAETSGNRKSQVGSGARSEKIRTYNWKDSRCSDHRIGKNFPLPSFLSGSGLDDMIGACILLDQQEMMAELAEKQ 1346
G RGR L MALD+FV+++L GI R F E+TERL DPD++ + L E++QER +EEVV Y + K ++LE AK ES G D +M+EMAR E++ L++ ELE R+ +L+LP DP D +NVMLEIRAGTGG EA ++AGDL+ VY ++ QGW ++++DE+ + GG+KT + EI GDKVYSK+K+EAGVHRVQRVPATETQGRVHTSTATVAVMPEVD+VTV+I ++I++ TARSGG+GGQNVNKVE+AVDL+H+PTGIRIFCTQERSQLKN+E AM LLRSKLYE+ELEKQ + +G R+SQ+GSG RSEKIRTYNWKDSRC+DHR+G+NF L FLSG +D+MI C+L++Q E + +++++Q
Sbjct: 52 GGKRGR-LCMALDDFVVNKLDGILRAFTEMTERLADPDVINNPNLSREINQERTKIEEVVGAYEHWRKLGQELEDAKNLLMES---GDDPDMREMARLEVKQLDSSREELEDRLMILMLPQDPMDDKNVMLEIRAGTGGSEAGLFAGDLIDVYTRFGQTQGWKVRMIDESRNDEGGYKTAVLEIQGDKVYSKMKFEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEVTVKIDPKEIEMHTARSGGSGGQNVNKVETAVDLLHKPTGIRIFCTQERSQLKNKELAMTLLRSKLYEMELEKQQEQITGQRRSQIGSGGRSEKIRTYNWKDSRCTDHRLGQNFNLDKFLSGE-IDEMINQCLLMEQNEKLEQMSKEQ 423
BLAST of mRNA_F-serratus_M_contig1.18.1 vs. uniprot
Match: A0A7S3P9F9_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P9F9_9STRA) HSP 1 Score: 453 bits (1165), Expect = 1.790e-151 Identity = 236/369 (63.96%), Postives = 290/369 (78.59%), Query Frame = 3
Query: 237 LRMALDEFVLDQLSGIERTFNELTERLGDPDILGDSKLLVEVSQERAGVEEVVQCYTTYTKAMEDLELAKEFFAESSGSGGDAEMKEMAREEIRGLEAQLMELETRMKLLLLPTDPNDSRNVMLEIRAGTGGDEAAIWAGDLLGVYRKYASEQGWSLKIVDETPAETGGFKTVIAEINGDKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDDVTVEIRNEDIDLKTARSGGAGGQNVNKVESAVDLIHRPTGIRIFCTQERSQLKNRETAMKLLRSKLYEIELEKQLAETSGNRKSQVGSGARSEKIRTYNWKDSRCSDHRIGKNFPLPSFLSGSGLDDMIGACILLDQQEMMAELAEK 1343
L MALDE ++ +L I R++N LTERLGDPD++ DS LL +V +R+ EEVV Y Y++ +EDL A+E F E+ G DA+M+EMAREE++ LE +L ELE RMK+L+LP DPND+RNVMLEIRAGTGG EA+I+AGDLL VYRKY S QGW ++DE+ + GG+K V+ EI GD VYSKLK+EAGVHRVQRVPATE+QGRVHTSTATVA+MPE DDV V+I +DI+L T RSGGAGGQNVNKVE+AVDL+H+PTGIRI CTQERSQLKN+E AMK+L SKLY++E EK+ E R SQ+G+G RSEKIRTYNWKDSRCSDHR+G+N+PL FL G L M A I DQ+E + EL ++
Sbjct: 42 LTMALDEAMMSRLENIRRSYNALTERLGDPDVISDSNLLQKVMSDRSQSEEVVLAYEEYSQMLEDLAGARELFQEA---GDDADMREMAREEMKELEPKLEELEERMKILMLPKDPNDNRNVMLEIRAGTGGSEASIFAGDLLDVYRKYISSQGWQSNLIDESTGDDGGYKNVVLEIKGDMVYSKLKWEAGVHRVQRVPATESQGRVHTSTATVAIMPECDDVDVKIDPKDIELSTMRSGGAGGQNVNKVETAVDLLHKPTGIRIKCTQERSQLKNKELAMKMLMSKLYDMENEKREMEERSRRGSQIGTGGRSEKIRTYNWKDSRCSDHRLGQNYPLQQFLGGD-LGPMHEAMIAKDQEERLKELTQE 406
BLAST of mRNA_F-serratus_M_contig1.18.1 vs. uniprot
Match: R7QHP1_CHOCR (Peptide chain release factor RF1, Rhodoplastic n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHP1_CHOCR) HSP 1 Score: 442 bits (1138), Expect = 4.880e-148 Identity = 227/358 (63.41%), Postives = 285/358 (79.61%), Query Frame = 3
Query: 261 VLDQLSGIERTFNELTERLGDPDILGDSKLLVEVSQERAGVEEVVQCYTTYTKAMEDLELAKEFFAESSGSGGDAEMKEMAREEIRGLEAQLMELETRMKLLLLPTDPNDSRNVMLEIRAGTGGDEAAIWAGDLLGVYRKYASEQGWSLKIVDETPAETGGFKTVIAEINGDKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDDVTVEIRNEDIDLKTARSGGAGGQNVNKVESAVDLIHRPTGIRIFCTQERSQLKNRETAMKLLRSKLYEIELEKQLAETSGNRKSQVGSGARSEKIRTYNWKDSRCSDHRIGKNFPLPSFLSGSGLDDMIGACILLDQQEMMAEL 1334
++ +L + TF+ +T +L DPD+ GDSK L+ +S+ RA +E VV Y + + LE AKE F+E+S DAEMKE+AREE+ LE L +LE +K+LLLP DPND +N MLE+RAGTGGDEA+IWAGDL+ VY KYA+EQGWS+ +V E+ GG+K I EI GD VYSK+KYEAGVHRVQRVPATETQGRVHTSTAT+A+MPEVDDV V+I +DI+L T RSGGAGGQNVNKVE+AVDL+H+PTGIRIFCTQERSQLKNRE AM++LR+KLYE+EL +Q AE G RKSQVG+G+RSEKIRTYN+KDSRC+DHR+G+NF L FL+G+ +++++ ACI DQQ M+ L
Sbjct: 6 MIRKLQSTKETFDSMTMQLADPDVCGDSKELMRISKARAALEPVVAAYDDWMASTSALEEAKELFSEASD---DAEMKEIAREEVNSLEQHLRDLEEMLKILLLPKDPNDEKNCMLEVRAGTGGDEASIWAGDLVRVYMKYAAEQGWSVALVSESEGSDGGYKECILEIRGDAVYSKMKYEAGVHRVQRVPATETQGRVHTSTATLAIMPEVDDVEVKIDPKDIELSTTRSGGAGGQNVNKVETAVDLMHKPTGIRIFCTQERSQLKNRERAMQILRAKLYELELAEQNAEIYGRRKSQVGTGSRSEKIRTYNYKDSRCTDHRLGQNFSLQDFLNGN-VENIVQACIFQDQQAMLEAL 359
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 624.8 |
| Seed ortholog evalue | 3.2e-176 |
| Seed eggNOG ortholog | 2880.D7FY16 |
| Preferred name | MRF1 |
| KEGG ko | ko:K02835 |
| Hectar predicted targeting category | signal peptide |
| GOs | GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0006996,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009507,GO:0009536,GO:0009657,GO:0009658,GO:0009668,GO:0009987,GO:0010027,GO:0010467,GO:0016020,GO:0016043,GO:0016149,GO:0019538,GO:0019866,GO:0022411,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0032543,GO:0032544,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0061024,GO:0070126,GO:0071704,GO:0071840,GO:0097159,GO:0140053,GO:1901363,GO:1901564,GO:1901566,GO:1901576 |
| EggNOG free text desc. | translation release factor activity |
| EggNOG OGs | COG0216@1,KOG2726@2759 |
| Ec32 ortholog description | peptide chain release factor 1 |
| Ec32 ortholog | Ec-08_004700.1 |
| COG Functional cat. | J |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko03012 |
| Exons | 8 |
| Model size | 1972 |
| Cds size | 1356 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622928774.9192383-UTR-F-serratus_M_contig1:471986..472009 | 1622928774.9192383-UTR-F-serratus_M_contig1:471986..472009 | Fucus serratus male | UTR | F-serratus_M_contig1 471987..472009 + |
| 1690962563.408363-UTR-F-serratus_M_contig1:471986..472009 | 1690962563.408363-UTR-F-serratus_M_contig1:471986..472009 | Fucus serratus male | UTR | F-serratus_M_contig1 471987..472009 + |
| 1622928775.0506825-UTR-F-serratus_M_contig1:482748..483341 | 1622928775.0506825-UTR-F-serratus_M_contig1:482748..483341 | Fucus serratus male | UTR | F-serratus_M_contig1 482749..483341 + |
| 1690962563.5586383-UTR-F-serratus_M_contig1:482748..483341 | 1690962563.5586383-UTR-F-serratus_M_contig1:482748..483341 | Fucus serratus male | UTR | F-serratus_M_contig1 482749..483341 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622928774.9347632-CDS-F-serratus_M_contig1:472009..472231 | 1622928774.9347632-CDS-F-serratus_M_contig1:472009..472231 | Fucus serratus male | CDS | F-serratus_M_contig1 472010..472231 + |
| 1690962563.4234285-CDS-F-serratus_M_contig1:472009..472231 | 1690962563.4234285-CDS-F-serratus_M_contig1:472009..472231 | Fucus serratus male | CDS | F-serratus_M_contig1 472010..472231 + |
| 1622928774.9616153-CDS-F-serratus_M_contig1:474790..474934 | 1622928774.9616153-CDS-F-serratus_M_contig1:474790..474934 | Fucus serratus male | CDS | F-serratus_M_contig1 474791..474934 + |
| 1690962563.4504166-CDS-F-serratus_M_contig1:474790..474934 | 1690962563.4504166-CDS-F-serratus_M_contig1:474790..474934 | Fucus serratus male | CDS | F-serratus_M_contig1 474791..474934 + |
| 1622928774.9765372-CDS-F-serratus_M_contig1:479742..479865 | 1622928774.9765372-CDS-F-serratus_M_contig1:479742..479865 | Fucus serratus male | CDS | F-serratus_M_contig1 479743..479865 + |
| 1690962563.4654555-CDS-F-serratus_M_contig1:479742..479865 | 1690962563.4654555-CDS-F-serratus_M_contig1:479742..479865 | Fucus serratus male | CDS | F-serratus_M_contig1 479743..479865 + |
| 1622928774.9911466-CDS-F-serratus_M_contig1:480173..480356 | 1622928774.9911466-CDS-F-serratus_M_contig1:480173..480356 | Fucus serratus male | CDS | F-serratus_M_contig1 480174..480356 + |
| 1690962563.474703-CDS-F-serratus_M_contig1:480173..480356 | 1690962563.474703-CDS-F-serratus_M_contig1:480173..480356 | Fucus serratus male | CDS | F-serratus_M_contig1 480174..480356 + |
| 1622928775.0019333-CDS-F-serratus_M_contig1:481095..481224 | 1622928775.0019333-CDS-F-serratus_M_contig1:481095..481224 | Fucus serratus male | CDS | F-serratus_M_contig1 481096..481224 + |
| 1690962563.501171-CDS-F-serratus_M_contig1:481095..481224 | 1690962563.501171-CDS-F-serratus_M_contig1:481095..481224 | Fucus serratus male | CDS | F-serratus_M_contig1 481096..481224 + |
| 1622928775.0127733-CDS-F-serratus_M_contig1:481603..481762 | 1622928775.0127733-CDS-F-serratus_M_contig1:481603..481762 | Fucus serratus male | CDS | F-serratus_M_contig1 481604..481762 + |
| 1690962563.5231438-CDS-F-serratus_M_contig1:481603..481762 | 1690962563.5231438-CDS-F-serratus_M_contig1:481603..481762 | Fucus serratus male | CDS | F-serratus_M_contig1 481604..481762 + |
| 1622928775.025984-CDS-F-serratus_M_contig1:482024..482198 | 1622928775.025984-CDS-F-serratus_M_contig1:482024..482198 | Fucus serratus male | CDS | F-serratus_M_contig1 482025..482198 + |
| 1690962563.5390685-CDS-F-serratus_M_contig1:482024..482198 | 1690962563.5390685-CDS-F-serratus_M_contig1:482024..482198 | Fucus serratus male | CDS | F-serratus_M_contig1 482025..482198 + |
| 1622928775.0389633-CDS-F-serratus_M_contig1:482526..482748 | 1622928775.0389633-CDS-F-serratus_M_contig1:482526..482748 | Fucus serratus male | CDS | F-serratus_M_contig1 482527..482748 + |
| 1690962563.5486538-CDS-F-serratus_M_contig1:482526..482748 | 1690962563.5486538-CDS-F-serratus_M_contig1:482526..482748 | Fucus serratus male | CDS | F-serratus_M_contig1 482527..482748 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1.18.1 >prot_F-serratus_M_contig1.18.1 ID=prot_F-serratus_M_contig1.18.1|Name=mRNA_F-serratus_M_contig1.18.1|organism=Fucus serratus male|type=polypeptide|length=452bp
MGYVSSKTRLACLSCLIVAASCFLSPSPYILRGIDVLVATSLDSMEYSCS KPQRPKITGRRPCQGAWRGRPLRMALDEFVLDQLSGIERTFNELTERLGD PDILGDSKLLVEVSQERAGVEEVVQCYTTYTKAMEDLELAKEFFAESSGS GGDAEMKEMAREEIRGLEAQLMELETRMKLLLLPTDPNDSRNVMLEIRAG TGGDEAAIWAGDLLGVYRKYASEQGWSLKIVDETPAETGGFKTVIAEING DKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDDVTVEIRN EDIDLKTARSGGAGGQNVNKVESAVDLIHRPTGIRIFCTQERSQLKNRET AMKLLRSKLYEIELEKQLAETSGNRKSQVGSGARSEKIRTYNWKDSRCSD HRIGKNFPLPSFLSGSGLDDMIGACILLDQQEMMAELAEKQRKGQETAAS R* back to topmRNA from alignment at F-serratus_M_contig1:471987..483341+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig1.18.1 ID=mRNA_F-serratus_M_contig1.18.1|Name=mRNA_F-serratus_M_contig1.18.1|organism=Fucus serratus male|type=mRNA|length=11355bp|location=Sequence derived from alignment at F-serratus_M_contig1:471987..483341+ (Fucus serratus male) CGCAGCTCAACGCTCTGATCGCAATGGGTTACGTAAGTAGTAAGACAAGG
CTGGCATGCCTTTCTTGTCTGATAGTCGCTGCGTCTTGTTTTTTATCTCC
GTCCCCATATATTTTGCGAGGAATTGATGTCTTGGTCGCGACTTCTCTTG
ACAGCATGGAGTACTCATGTTCTAAACCTCAGAGACCAAAAATTACAGGG
CGACGGCCCTGTCAAGGGGCTTGGCGCGGAAGACCGCTGCGAATGGTGGG
TGCCTTCCGCGATTTTTCCGTTTACGATCCCAAGTTGGTCCATGCTAAGC
TTGCGTACCTGTTGTTCATCTAACTTTTCGAACGCACAAGCGGCGCAAAC
TTTCAGCAGAAAGATTGGATAGAGAGACCACCAGACAGAGAGAAAATACA
TACCAACAGTCTGTACTGCTTTATGTGACGACCACACAATTGTAGTTCAA
CACCAGGTATGCAACTGCAGTGGTCCTTGTGCAAGTCGACTAAAGGTACC
ATTTAGGGTGCTACGCAAAGTAAACCCAGATTTGATCATGTAGTATGTTC
TTGGGAAGGAGTTCCCGACATCCCGGATCGTTAATGTTTCTTCGACAGCT
GCTTCAACTGGTTTCACAAAGCTTGCACCACCATATGCACGGTTGACTGT
AGTGCGAGGCAAACACTGTTTAAAGAAAAATCATAACGCTCCTAGACAAG
TCTATCGACTTCGAAACTCGGGAACAAACACAACGGAAAGCAATCGAAGG
TGAGGACGAACGGGGACAGGGAAATATTCATTTTCCCTGTTCAGCTGACC
ACGAGCAGGATTGCCAACCTTACCCGGTTGATCCATGCATACACATACGG
TATTTTCAACATGTCTATTCCATACTAACAGTGGGTAATGAGAAAGAGAG
GCGTATATTAATATTAATCGGTCCATGGTGACCTGCTATGGCAGCAGCAC
TCGTTCGGAACTACCTTGAGGTTTACTGGCCCTGAGCCGGCGGACTCTCG
GCAGTGAACGCCATCGGTACGCAATTGCGTGACCCGATAAACTTGGGACT
TACCCGATGGCGTATGGCGGTTTAATATAAATATATGGACGACGCCGCGG
AACTCGGGAGGAATCCCGTAAGTAAGCACCAGATTCAGCCTCAGTATGGA
GATGAGCAGGCTGACGCGAGACGGGACTGCCGAAACCGTCTCGTGACACA
AAATTCTCAGGCACGAACGCGGACAGGGGAATGTTATTTTCCCTGTTCAG
CTGACCACTAGCAGGATTGGCAACCTTACCCGGTTGATCCATAATTTTGC
TGTATGTTTGACCACACATAGATACATACATACTGTGAGTGTTCAACTAT
TGATAGACCTGTTATATAGGTTGGAGAGTTGTAGATGTCGGAAATCCTAA
AATTGTATATCTCGATAAAAAACATACCAGGTATGTATGATCATTACATA
TAGCAGAGGTTGGATCAACCGGGTAAGGTTACCCAATCCTGCTCGTGGTC
AGCTGAACAGGCAAAAAGAATATTCCCCTGTTCCCATTAGCGCCTGTAAA
TTTGGTCTCGTGAGACGAGTTCGGCCGTCCCGTCCCGCGTCAGCCAGCTC
ATTCTCCATACTCAGGCTGAAATTGGTGCTTACTCACGGAATTCCTCACG
ATTTCCGCGGCGGCGTCCATTAGTGTATACCGCCACACGCCATCGGGCCA
GTCCCGAGTTTATCGGGTCATTCAATTGCATACCGATGGCGTTCACTGCC
GAGAGCCCGCCGGCACAGGACAAGTAGTCTTGCAAGATAGTTCCAATAAC
TGGTGCTGCCTTGCAGTTCACCATAGACCAAATAATGTGCGCCTCCCTTT
TCCCACCCCCACTACTGGTATGTGTACGGAGTGGGCATGTTCAAAGCATC
GAGGCAGAAGCTGTAGGCGTGAACCGGGGGGATATGTTGGAGCTAGAACT
ATTGCGTACGAGAGAACTGCTCGCAGATCTCCTCTATAGGGCTGACGGCG
GGATACTATTAATAGTGTAGCGTTGCGGCAAAAATTGCCTTCGTAATCTA
CCACAAATCGCCCGAATGATGTTTTGTGTTTGTGACGAGACTCTCGGATC
TCTCACAACTTGGAGCGATTATCATGTACTCTTGAGTATATTTTGCTCCC
GAACGTCATACCTGTACAGTAGTAGGAAACGAGAGAAATATTTCATGACG
AACATTAAATCAGGGACTCCACATGGGCGTGATGTGTGCAGGTTTACTCA
CTTGAAGGTGCTTCGAGCTACTACAGTAATGTACATACTTGAGCCTTGCG
AATAACATGTAGCCACCGAGCAAACTATGCGTCAAATTGTACCATACATA
CCTGCCATCACACGCCCGAAAGCACGACTCAATTTCCACCGCTTTGTAGA
GCATGGTAATACTCAACCAAGCACTTGTCTTGCCCATGCCCGAGTATTTC
CGCCAGATGGTCTTTCGTCAGTTGACGTTTCGCCCTCTTTCTTGTCGACT
TCAAGAGAGCCCTTTCCCGTCAAGACTAGGAAATAAAACGAGGGAATCGT
AACCAATCCGAGAAAAATATAAATCCGCTATATTTGTACGCGATACGTTT
CGCGCACAACACCCGTTCCGCCCTCGAGAATAAACTTAAGTTCGACTGTT
GTCGACGAATCACTCTTGCTCGCCGGGGATGGGATTTGGTGCAACGTATT
ACACTCCTGTACAGTACACGTGTAGGTAGTCCATCAAAAAGGTGCATCAA
AAGGATATTCTTCGCCGTCCTGTACGTCACGTCACGCTTGACGCGAAAAC
GCAGGCGCTCGATGAGTTCGTTCTGGATCAGCTCTCGGGCATCGAACGAA
CGTTCAATGAGCTCACGGAGCGCCTGGGAGACCCAGACATTCTTGGAGAC
TCGAAGCTCCTGGTTGAGGTGTCTCAGGAGCGGGCGGGCGTCGAAGAGGT
GGGAAGACAAATAAATGCAATACATCGTTCGCTGCCAATACTGCATGTCG
ACGTCACAGTCCATGCATGCACACAATGCACCTGGTAAGGTGTACGATGT
CATGATTTTGAACCTTGGCTCGTAAGAGCTCTTTATGGTTCGTCTCCCAC
GCCGGTAAGGCATCCACTAGTGTAGTGTAGAGAGCTCGCGCTATATATCT
CACTCGGTGGATCCGCTTCCTTGTTTCGCGAAACACGATTAATTTTCACT
TCGACCACAACGCCGGCCCGAAGATGGGCTATCTGTCTTTATTGGGAGGA
GACGGCACGGAAATAGCCCCTACCGGAGACATATTTGACCAACCCCCTTG
TGGAATGAGTTGAATTCGGGGCAAGCTTGCCGACCATGTAGGGGATAATG
TTGTCCTATCCCCGGAAGAGGCTGTTTTGGTGATCTCCCCGGGGACGGAA
TCGTCATATCCCCTCCCTCCCCAACAGTTGAACAACTATCATCTCTCTAC
GCAGGACCGTGAAACATCTACACAGTACGTTCGCCTAAGTGATAGGGTAG
AAAAACAAAGCACACACATGTATACACACAAACAAGGGTAGAAAAACAAA
GCACACACATGTATACACACAAACAAGGGGGTAGGAAGGGAACGACAAGG
CGCTATAAGGACTAACTGTAGATAGAGTGTATCCCCTTTGTCACGTTCTC
ATCGATCTCCCCTTGGGAGGACCACTGCGAGTAGCATATACTGGCTAGGA
GAACAGGGCCGAAATGCCCTGTTATGTGCAATTTAATTAACACATTCAGG
GCTAATCCACCGGTGCTAGGAGCGCGAGCGCTTTCATTCATCGATGGCAT
TACGGTTATTCTACCGCCGTAACTTTACCTCGGCATGGCAGCTATTGGGA
AAGTCACGGAATTGCTTCAGGAACGCCTGAGGGCAGAAGGCGTCTCGTTG
AACCGCAGGAAATCGCAGGCCCTGCTAGCGAATGGAGTCGGGCCAGACCA
TCTGACGTAAGATTAGCGTGCGGCGATGGATGACATAAGGCTCACGGTAG
TCCGGCAGGGGATGAGGGGCGTGGGAGTACCCGCTGTAACAGAACAGTTC
AAGCGGGGTTTCTTGCAGGAGGTTGTTAGTGGAGAGCCAGCTGAGCTTGT
GAGGGCGGTTGTCCCGATGGAGGATGCCCAAGCGACCTTTCAGATCTTGC
GTCTATCTGCCGCTTCCTGCCTGTCACACCTGCGTTGCCCAGTACTGCCC
TCCATCACATACCAAGCTGCTGCAGATTACGACGCTTTGGTGGAGTGGGC
GTTAGCGTCTATCATGGCTGCTGACGGAGCTCCCGCGGCAGGGCTACCAA
CCCCAAAGGAAGCCCACGATCCCACAGTGTGCCAAAACCAGACCTACCTG
GGAAACGAGGCCCTACGGCAGGCCTACCTGCCCACCCGAGAAGGCGGCCT
TGGACTCACCAGCAGCAACTCCAACAAGTCGCTGCCTCCGCCCGGGGGAA
TCTTCAATCCCTTCTCGAACGGCTGCCTGAGTGGCCCAAGGCGTCAGCGC
CACTTGAAGAGCTGAAGTATGTGGCCACCAAAGCCAGATAGAAGAGGCAG
TGAGAAGTTCGTGGGCAGCCCTGGCGGCAGAAAGTGACCTTCATGGGAGA
GGGATGAGGAGTCTACTGCCCGAAGCGGGAGAAGGAGGAGGGGGGCGGGG
AGGCAGGAGTGCTGAATGTCGAGAACAATGGGGGCATCCGTTGGCAACCC
AGCCTGATAGGGAGAATGAGCTGAGCCAGACCAACCGAGGTGTCCGAGGA
GTATGCGTGGGAGTTGTGCCCCGTGTCCAATCAAAGCTCTCGCACGCCCT
CCACGCGCACCGTGGGAAAAAGCTCCTGCAGGACCTCCAAAACTTGGGAA
ACACGACAATGGAAAGAGCTATGGTAAGGTTCAGAGGAGCGCGAGAAAAG
GGTTCCATGGTATTTGTGAAATATTTGGGGGTCTCGCAAGAAGACACGAT
AGAGGGGCCCCTGTGGAGGGAGACCTTTGGCAGTAGCCTGGGATCGCATG
ACGCGGCGGAACTTGTTAATGGGATGTGTCATGGCAATCGTTGCCGGCAA
GAAGCCACCCGCCTCCACGCTATATCCTGCACAAAGACGGGATGGAGCTC
TTTCAGCCACCATCGAGCCTCCACCAGGCACTGGCTCCATTCCTTCGCGA
GAGCAAAGTACAGTTTGTTGCTGAAGACACATGGCCCTTTCCGAGAGAAA
CCTAGCGGACAAAACGGCAGAAAAAGCCCTCTAGGAACGGAAATAACAAC
GAAAGCGGGGGCACTCTTAGACAACCACCCTCGACGCAAGAATAAGGTGC
TTCTATTCGACATTACCATCGTCAACCCTTGCACCAGCTCCCATTTGGAG
AATGCAGCCCTCCATGCAGGAAAACACCTCGCCGACGCAGTCGAGCGGAA
GAAAAACAAGTATCGGGACTCGTTCCCCGCTACCTACTCCCTTCTTCCTC
TCGTGATGTCGACGTGTTATGAGGTTGACTCAGACGTGTATGCCTTCGTC
AAGGGGCTCGTCATAGACGGATAGGTCGGAGATACACTTGAGTGAGTCCC
AGTATCTGGCGGAGCGAACGGAAGTGTTCGGCGGCGATTATCTTTTATTT
TACAGCAGACACTTTCATTCCGCACGCGCCATCCCTGCAGACAGGAGTAG
CGCTTGCGGGCAAGCGATAGCTCCGTTCGCAAACCCGATGTCTGTACACG
CGCATCTTACCGAGGGAGTAACCGGATCCGAGGGACGGGAAGGAGCGAAC
GGGGTCGGGGACGGGATCGGAGTCAGGGGTGGGAACGAAGACGGGAACGG
GGACGGGGGTGGGAACGGAATTAGGAGCGGTCATGGGGATGGTGTGGAAA
CGGGAACGGAGGTGGAAGCGAGCGAACGTACGCAATATGGGAATGGGGAC
AGGAGCGGGGACGGGGCTGGAACGGGAACGAGGGGGGAGACCCGTTGACG
AACACAAGGAGAACACAAGATGGGAACGTGGACGGGAGCGAGGACGGAAA
CGTGAGCAGTAGCGTAGACGGGAACCGGGACGAGAATGGAGAAGGAAGGG
GGGCAGAAAAAGAGCTCTTGTATCCGCCACATCAGGAAAGAAGCAGAGAA
GTCCGGGCACTGCCATTCTGCACGCGGCATCATCTCTGTAGACAGGAGGT
GGCGCCTGCAGGAAGCCCTCAGCTTCGGGCGCAGGACCCGGCGCCTGCCC
GACGATGTGGTACCGAGGGGAGAAGGGGGCACCAGGGACGGGAGGGAGGG
CGAGTACGGGAATGAGCACGATGGTAGAGATGGGCACGAGAACGAGACCG
GGAACGGGAAAGAGAACAGAGACGATAGTATAGATCAAGGTGGAGGGGAG
AGAGAGCCTGGGAATTGACGGAGTGGTAATAGAGATGGCTCGGAAGACGC
GAAAAGGCGGGCGACGCCAACCAGAAACCAGAAACCATAGCCGCAAGACC
CGACGCCCCAGCGAGACCGACGCATCATGCTGAGAACCAGGGCCCAGGGG
CGGGAATAGAGGAGGGCGGAGGAGGGGCGAAGAAGAGAAAGAACCCTGCA
GGAGATGCAGACGCGATGTGCGTAACGGGAGAGACTTGGGTGGAAAGAGA
AAAAGACGTAGGCAAGAAAGGGTTGGTTCAGTAGCTGCCGATCCAGATAA
TGGGGAGAATATCAAGGAAGCAGGGGGGGGAGCACAAGGTACCCAGGGCT
AAAGTAAGAACTTCACAAGTAGAGAGAGTGTGTCCCCTTTGTCGCGTCTG
ATCATAAGTTTTCGTAATAAGTAACATTGATTCCCCTTGGGAGGATCAAT
GCGGGGGCATAGAATGACTTCAGATGAAAGGGCCGGATTGCGTGGTTATG
TGTAATTCAATAAACACACACACACACAGGACGGGAGCGGGGACGGGGGT
GGAGACCCGTGGACGAACATAGAATGGGAACGGGGACGGGAGCGAGGACG
GGAGCAAGAGCAGTAGCGGAGATGGGAACGAGAACGGAGTCGGGGAGGGC
GGAAGATAAGCGAAGAAGCGCAAGAAACCGCACAAGAGTTGTAGAGGCTT
TGTGGGAAACGGGGGAGACTTGGGCCGAAAGGGGAAAAAAACGTAGATAA
GAAAGGGTTGGTTCAATAACTGCTGATCCAGATAATCTAGAGAATAGCAA
GGAAGCAGGGGGGGAGCACAAGGTACCCAGGCCTTAAGTAAGAACTGTAC
ACGTAAAGAGTGTGTGTCCCCTTTGCCGCATCTGATCATTAAAAGAGGTT
TTCGTAATAATTATCGTTGAGATCAATTCGAGCGGCATATAATGACTACG
ATGACAGGGCCAGATTGCGCGGTCATGTGCAATCTAATAAATATATACAC
ACACATACACACACACTATACACACACACACACAGCGAGAAGTAACCCCC
AGATGGGTTACAAGTAGCATAGAATGAGTAGACTACATGGCCGGACGGTT
AGGTGCAATTTAATAAATACACACACACACACACACACACACACACACAG
TATCACACAACACATAGAATGACTAGGATGACAGGGCCGGACATACACGG
GAGGATCAATGCGAGTGGCATGTAATGACTAGGATGACAGGGCCGGATTG
CGTGGTTATGTGCAATTTAATAAATACATACACACATACACATACACACA
CTACACACACTACACACACACACACACACACACACACACATATACACACA
CACACAAACACACACGAGCTCGAGGTTGTCGCGCGGTCGGCCTATTCCAC
GACCAGGTGGTGCAGTGCTACACCACGTACACGAAGGCCATGGAAGACCT
GGAATTGGCCAAGGAATTCTTCGCGGAATCTTCGGGGTCGGGGGGAGACG
CGGAGATGAAGGAGATGGCTAGGGAAGAGGCGAGTGGAAACAAAAACGAG
TGGTGTAGCAAGCGCGAGAGGTGGGAAATGAAAATATGGTATGCCATCGC
TTTTCCCTTTTATTTTCATGTGTGGAGGGATCCTGATTTGTAGGGCGTTC
TGTAGCTGTCGCCAACCATTGCCTGTGGGTTATTTTTCGCCACCTGTAAG
TCGCCGAGGCCGCCGCAATGATCGATCCATCTAGAATCGTTCCAAGATTC
ATAATTCTTCCCGCGCGCCTCCCCCTCATTTCGCAACCCCTCCTGCAACT
CCTGCGCTCGGGGGCGTTTGCCGCTTTCGGGGTGCAGATTCGCGGGCTCG
AGGCGCAACTGATGGAGCTAGAGACTCGCATGAAGTTGTTGTTACTGCCC
ACGGACCCGAACGACAGCCGCAACGTTATGCTGGAAATTAGAGCTGGCAC
GGGGGGCGACGAAGCGGCGATATGGGCCGGGGATCTTCTGGGCGTCTACC
GGAAATACGCGTCAGAGCAGGCGAGGGTGCAAGGCGCGACCTTCCAGCGG
CCGTTTTTGTTGGAAACGCTGGCAAGGGGGTAGGGCGTCGCGCGGGAGAG
GGGCGTGAGCGTCAGCTCAACCGTCGCGAGGTCGGGGGGCTCTTATGCGG
GAGTTGATGAGATATTTCAAAACCTCGGGTTTGCTCTGTTGTGCGTCTGG
TCGATGTACCCTTATGCACGCCACGAAAAGCCGTATCAATCTCGATTCAA
AAGATTACCGGAAGTCAAAAGAGCATAACGCGCACAGGCGAAAATATTGC
TATTTTTTAATGTGCAAAAAGAGTAGTCGCGCTCTGCCTGCTGGCGTCTA
TATCCCCGTTTGCGACGGGCGTAGTTCATTTTCCGTTTTTTTCTATGCAT
ATGTAGTGTTTCTGCCTTCAGTGTACCGCACAACAGCGAACTTTAAGCGG
TGTTGGAAAAAGGCCCAACCGACATGACGCGGGAACAAAACAGCGGAAGC
AACTGCAACAACGAAAAACAACCCCCCCGATCGCGGAACGCCTTTGCACG
GGTACCGCAATCAATCCCGCCTCCTCCCCTCTAATAAACCTTTTCGGTTT
CTTCGCGGGCGGTGCGCCCTGCTCTCTCACGTCCGTCTTCGCAGCAGACT
ATCCCCGCCACCCTGCAACTCGCTCTGCCTGCAAATGTTACTTACTTCGT
CACTAGCCTTCTCTCTGTTACCTACATTTGGCTTATCTGTAAATTTATAC
TATATCCAGGGATGGAGCTTGAAGATCGTCGACGAAACGCCGGCGGAGAC
GGGAGGCTTCAAGACTGTGATCGCCGAGATTAACGGGGATAAGGTTTACA
GCAAGCTCAAGTACGAGGCGGGGGTGCACAGAGTGCAGGTGAAGAGGAAA
GGTAACATGGACTGCGAGAAAAAAAAAGCAAGAACACAAACGTGACGGTT
GGGGGAACGGGGAGGGAGGGTCAAATAATAAAAATAACCGAAGAAACGCC
TCTACTGGTCTATATTTGAAGTGTGTGGATCATTAACAAGTATATAGAGA
GCGAAGGGCAGCGGCAGAAGCAGAGCATGTAAAAAAAAAAAAAAAACACC
GGCGAAATATACTCGTTCTGGGAAGACCTTGCTGCGACTAGCGTCACACG
TATATTATCCCGGAGCGACTGCCGTACGAGTGCTTACCACCGCGAGACCC
CCAATCCCCCCGTACGTTGTGCCCGTTGCCTGAAAAAAACACTGCACCGG
TGCCAACGGCGTAACAGCGGGTTCCGGCGACCGAGACTCAAGGCCGAGTA
CACACGAGTACGGCGACGGTCGCGGTGATGCCCGAGGTCGATGACGTCAC
GGTGGAGATCCGAAACGAAGACATCGATCTCAAGACCGCTCGCTCGGGGG
GCGCGGGGGGTCAGAACGTTAACAAGGTATGGATGGTGTGTCTCGGCGTT
CTCGTATACGACATTCAAGTCCGTGGTGAGAGGGGGTGGGGATAAGGTGA
TCGGACTCCGGTCTCGCTGTACGCGTAACCCCGAAATCTAACGCGAAGAA
TATGTACAAGGATGCGACCAACGCGCGCCCGGTGGGCAGTGGGTCGGCGG
CAAAACACAAAATGACGAAAACATCCCGCCTCGTCTGGTGTTTTTGACCG
TTTTTGTCTCTCGTTCGGTGTCCGTGGGGAAAAAAAAGGTTGAGTCTGCA
GTGGACCTTATCCACAGGCCTACCGGGATTCGCATCTTCTGCACCCAAGA
GCGTAGCCAGCTCAAGAATCGGGAGACGGCGATGAAGCTTCTGCGCTCCA
AGCTCTACGAGATAGAGCTGGAGAAGCAGCTGGCGGAGACTTCGGGAAAC
CGCAAGTCGCAGGTTCGAGCCGGTCCACCTGAAAGTATCAGAGATCATTC
TCGACGAGGGCGTCTAGCTCGACGTGTAGAGACGACGCTATGGGGGTATA
CTCTCTGGTCTTGTATTTTTTGTTCTATTGGAGGCCACGGCGTCGGAATA
CAGCAGGGAGGGTTCACCGGGTAGCCGACTCTCGCAGTCCCGACGTTTAC
TCTCCCTCTCTTCGTGGACTGGCTTCTTGTCCCAGCACTGTCGCCTGCGT
GTTAGTACCTCTTTGTGTCGACTGTCTTCCTCTAGAGGGAATGTTTGGGG
GACCAACCTTGAACACCCTGCGTATACCGCGTCCTGTCAGGTGGGCTCCG
GCGCCAGATCAGAGAAGATCAGGACGTACAACTGGAAGGACAGCCGCTGC
TCGGACCACCGGATAGGCAAGAACTTCCCTCTCCCATCGTTCCTGTCCGG
GAGCGGACTCGACGACATGATCGGAGCGTGCATCCTGCTGGACCAGCAAG
AGATGATGGCCGAGCTCGCGGAGAAACAGAGGAAGGGCCAGGAGACCGCC
GCGAGTAGATGAAAAGAGGGCGGGGGGCGTACTTGAATCGCACCTGTCAC
AATGGCGTTTAAAGAAAAACATGAACGCCATCTAAACCTCCGGACCACCC
ACTCTTGGGGGGAATGTCAAAAAAGATTTTATGTGGGAACATTGGCTGTA
GGGACAAAAGCTCTCCATGGTATTAAATGTGTTCGTTCCCCAATGTTAGT
CGCTGTTCTGCAGGGGGCGGGTGTAGGATCGGCTCGATTGACCCATATAC
CGAATATACTGGGAAACAAGATAGCGTTGTGAATGAGTACCACATTTAAT
TACGTACCAGAGACGAAAGTAAGGCCAGTACCCCCCCCTCCGTTCCTTTG
GGTACGTCGACTCTTCGTGTTGCTGTCGAAAGGTTGGGCTTGACCTCGAC
CTTCAGGGATGACTGCGGTGTCGCTCGCCGTTCAACGTTTTGGTCTACCC
GGAGGTGGGGGGTTAAATCGTCGAGTTTTTGGTTGCACCCAAACAGCGAA
GTTCCCGTGGGGCTTGCTGCCATTTAAATCTTTCTCTTCTTCCTTACTGT
ACGTGGGTGTCCGTCTGTAGATCAGACCTACTTAAAAAAAAAAAAAAATT
ATCAC back to topCoding sequence (CDS) from alignment at F-serratus_M_contig1:471987..483341+ >mRNA_F-serratus_M_contig1.18.1 ID=mRNA_F-serratus_M_contig1.18.1|Name=mRNA_F-serratus_M_contig1.18.1|organism=Fucus serratus male|type=CDS|length=2712bp|location=Sequence derived from alignment at F-serratus_M_contig1:471987..483341+ (Fucus serratus male) ATGGGTTACGTAAGTAGTAAGACAAGGCTGGCATGCCTTTCTTGTCTGAT AGTCGCTGCGTCTTGTTTTTTATCTCCGTCCCCATATATTTTGCGAGGAA TTGATGTCTTGGTCGCGACTTCTCTTGACAGCATGGAGTACTCATGTTCT AAACCTCAGAGACCAAAAATTACAGGGCGACGGCCCTGTCAAGGGGCTTG GCGCGGAAGACCGCTGCGAATGATGGGTTACGTAAGTAGTAAGACAAGGC TGGCATGCCTTTCTTGTCTGATAGTCGCTGCGTCTTGTTTTTTATCTCCG TCCCCATATATTTTGCGAGGAATTGATGTCTTGGTCGCGACTTCTCTTGA CAGCATGGAGTACTCATGTTCTAAACCTCAGAGACCAAAAATTACAGGGC GACGGCCCTGTCAAGGGGCTTGGCGCGGAAGACCGCTGCGAATGGCGCTC GATGAGTTCGTTCTGGATCAGCTCTCGGGCATCGAACGAACGTTCAATGA GCTCACGGAGCGCCTGGGAGACCCAGACATTCTTGGAGACTCGAAGCTCC TGGTTGAGGTGTCTCAGGAGCGGGCGGGCGTCGAAGAGGCGCTCGATGAG TTCGTTCTGGATCAGCTCTCGGGCATCGAACGAACGTTCAATGAGCTCAC GGAGCGCCTGGGAGACCCAGACATTCTTGGAGACTCGAAGCTCCTGGTTG AGGTGTCTCAGGAGCGGGCGGGCGTCGAAGAGGTGGTGCAGTGCTACACC ACGTACACGAAGGCCATGGAAGACCTGGAATTGGCCAAGGAATTCTTCGC GGAATCTTCGGGGTCGGGGGGAGACGCGGAGATGAAGGAGATGGCTAGGG AAGAGGTGGTGCAGTGCTACACCACGTACACGAAGGCCATGGAAGACCTG GAATTGGCCAAGGAATTCTTCGCGGAATCTTCGGGGTCGGGGGGAGACGC GGAGATGAAGGAGATGGCTAGGGAAGAGATTCGCGGGCTCGAGGCGCAAC TGATGGAGCTAGAGACTCGCATGAAGTTGTTGTTACTGCCCACGGACCCG AACGACAGCCGCAACGTTATGCTGGAAATTAGAGCTGGCACGGGGGGCGA CGAAGCGGCGATATGGGCCGGGGATCTTCTGGGCGTCTACCGGAAATACG CGTCAGAGCAGATTCGCGGGCTCGAGGCGCAACTGATGGAGCTAGAGACT CGCATGAAGTTGTTGTTACTGCCCACGGACCCGAACGACAGCCGCAACGT TATGCTGGAAATTAGAGCTGGCACGGGGGGCGACGAAGCGGCGATATGGG CCGGGGATCTTCTGGGCGTCTACCGGAAATACGCGTCAGAGCAGGGATGG AGCTTGAAGATCGTCGACGAAACGCCGGCGGAGACGGGAGGCTTCAAGAC TGTGATCGCCGAGATTAACGGGGATAAGGTTTACAGCAAGCTCAAGTACG AGGCGGGGGTGCACAGAGTGCAGGGATGGAGCTTGAAGATCGTCGACGAA ACGCCGGCGGAGACGGGAGGCTTCAAGACTGTGATCGCCGAGATTAACGG GGATAAGGTTTACAGCAAGCTCAAGTACGAGGCGGGGGTGCACAGAGTGC AGCGGGTTCCGGCGACCGAGACTCAAGGCCGAGTACACACGAGTACGGCG ACGGTCGCGGTGATGCCCGAGGTCGATGACGTCACGGTGGAGATCCGAAA CGAAGACATCGATCTCAAGACCGCTCGCTCGGGGGGCGCGGGGGGTCAGA ACGTTAACAAGCGGGTTCCGGCGACCGAGACTCAAGGCCGAGTACACACG AGTACGGCGACGGTCGCGGTGATGCCCGAGGTCGATGACGTCACGGTGGA GATCCGAAACGAAGACATCGATCTCAAGACCGCTCGCTCGGGGGGCGCGG GGGGTCAGAACGTTAACAAGGTTGAGTCTGCAGTGGACCTTATCCACAGG CCTACCGGGATTCGCATCTTCTGCACCCAAGAGCGTAGCCAGCTCAAGAA TCGGGAGACGGCGATGAAGCTTCTGCGCTCCAAGCTCTACGAGATAGAGC TGGAGAAGCAGCTGGCGGAGACTTCGGGAAACCGCAAGTCGCAGGTTGAG TCTGCAGTGGACCTTATCCACAGGCCTACCGGGATTCGCATCTTCTGCAC CCAAGAGCGTAGCCAGCTCAAGAATCGGGAGACGGCGATGAAGCTTCTGC GCTCCAAGCTCTACGAGATAGAGCTGGAGAAGCAGCTGGCGGAGACTTCG GGAAACCGCAAGTCGCAGGTGGGCTCCGGCGCCAGATCAGAGAAGATCAG GACGTACAACTGGAAGGACAGCCGCTGCTCGGACCACCGGATAGGCAAGA ACTTCCCTCTCCCATCGTTCCTGTCCGGGAGCGGACTCGACGACATGATC GGAGCGTGCATCCTGCTGGACCAGCAAGAGATGATGGCCGAGCTCGCGGA GAAACAGAGGAAGGGCCAGGAGACCGCCGCGAGTAGATGAGTGGGCTCCG GCGCCAGATCAGAGAAGATCAGGACGTACAACTGGAAGGACAGCCGCTGC TCGGACCACCGGATAGGCAAGAACTTCCCTCTCCCATCGTTCCTGTCCGG GAGCGGACTCGACGACATGATCGGAGCGTGCATCCTGCTGGACCAGCAAG AGATGATGGCCGAGCTCGCGGAGAAACAGAGGAAGGGCCAGGAGACCGCC GCGAGTAGATGA back to top
|