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Homology
BLAST of mRNA_F-serratus_M_contig1.16.1 vs. uniprot
Match: D7FY13_ECTSI (Ring finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY13_ECTSI) HSP 1 Score: 212 bits (540), Expect = 2.880e-62 Identity = 111/174 (63.79%), Postives = 130/174 (74.71%), Query Frame = 2
Query: 668 DAEAASLALARQLLEEEAMASYAAAVDMFRNGGNGRGAXXXXGMAALEGIASEDXXXXXXXXXXXXXXXXXVAMAEDESLDYDGMLELGSAIGDVRQERWRLRCETVISSLPRMKYAAGRIAG-DDVKCLVCQCDFEGGEELRELPCKHAFHTDCVDGWLAQNEECPTCRRSIS 1186
DAEA SLALARQL+EEEAMASYAAAVD FR+ XXXX +EG+A ED AMAEDESLDYDGMLELGSAIGDVR++RWR+RC++VI++LPR+ Y AG +G +D KCLVCQCD+E +ELR LPC H FHT+CVDGWL +NEECPTCRRS+S
Sbjct: 31 DAEAESLALARQLMEEEAMASYAAAVDNFRSAAX----XXXXXXGGMEGVAPEDMAAMQALMEEDENNPDAFAMAEDESLDYDGMLELGSAIGDVRKDRWRMRCKSVIAALPRVSYTAGGYSGGEDTKCLVCQCDYEEDDELRILPCSHTFHTECVDGWLEENEECPTCRRSVS 200
BLAST of mRNA_F-serratus_M_contig1.16.1 vs. uniprot
Match: A0A6H5KY69_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY69_9PHAE) HSP 1 Score: 171 bits (434), Expect = 4.520e-44 Identity = 93/164 (56.71%), Postives = 111/164 (67.68%), Query Frame = 2
Query: 668 DAEAASLALARQLLEEEAMASYAAAVDMFRNGGNGRGAXXXXGMAALEGIASEDXXXXXXXXXXXXXXXXXVAMAEDESLDYDGMLELGSAIGDVRQERWRLRCETVISSLPRMKYAAGRIAG-DDVKCLVCQCDFEGGEELRELPCKHAFHTDCVDGWLAQNE 1156
D EA SLALARQL+EEEAMASYAAAVD FR+ A L+G+A ED AMAEDESLDYDGMLELGSAIGDVR++RWR+RC++VI++LP++ Y AG +G +D KCLVCQCD+E +ELR LPC HAFHT V G + E
Sbjct: 201 DTEAESLALARQLMEEEAMASYAAAVDNFRSAA----AAARAAGGGLDGVAPEDMAAMQALMEEDENNPDAFAMAEDESLDYDGMLELGSAIGDVRKDRWRMRCKSVIAALPQVSYTAGGYSGGEDTKCLVCQCDYEEDDELRILPCSHAFHTGIVRGRVVGGE 360
BLAST of mRNA_F-serratus_M_contig1.16.1 vs. uniprot
Match: A0A7S4HU52_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HU52_9STRA) HSP 1 Score: 127 bits (318), Expect = 5.760e-29 Identity = 72/172 (41.86%), Postives = 92/172 (53.49%), Query Frame = 2
Query: 683 SLALARQLLEEEAMASYAAAVDMFRNGGNGRGAXXXXGMAALEGIASEDXXXXXXXXXXXXXXXXXVAMAEDESLDYDGMLELGSAIGDVRQERWRLRCETVISSLPRMKYAAGRIAGDD-----VKCLVCQCDFEGGEELRELPCKHAFHTDCVDGWLAQNEECPTCRRSI 1183
S ALAR L+ EEA ASY + D RN + +AALE +E+ VA E L YD +L L IGDV+QERW ++ E I SLP +++ + G D VKCLVCQC +E G+ LR LPC H FH +CVD WL+ + CP CR+SI
Sbjct: 157 SEALARHLMAEEAFASYNISTDFLRNNAD---QYSEEDLAALEAAMAEEDDVGEEID---------VADQPSEELSYDALLRLSERIGDVKQERWTMQAEKHIKSLPTVQFVSAISQGKDENDSAVKCLVCQCQYEEGDILRNLPCGHCFHRECVDPWLSTKDICPYCRQSI 316
BLAST of mRNA_F-serratus_M_contig1.16.1 vs. uniprot
Match: A0A836C9F1_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9F1_9STRA) HSP 1 Score: 119 bits (297), Expect = 5.250e-27 Identity = 55/105 (52.38%), Postives = 68/105 (64.76%), Query Frame = 2
Query: 893 EDESLDYDGMLELGSAIGDVRQERWRLRCETVISSLPRMKYAAGRIAG--------DDVKCLVCQCDFEGGEELRELPCKHAFHTDCVDGWLAQNEECPTCRRSI 1183
E+ ++YD +LELG AIGDV+QERWRLR I+ LPR K AA R G D KCLVC C++E GEEL LPC H +H CV WLA+ + CP C+RS+
Sbjct: 120 EETPMEYDALLELGEAIGDVKQERWRLRAPAAIARLPR-KRAAARSPGAAAAAACITDAKCLVCMCEYEAGEELMALPCGHDYHASCVAAWLARADACPLCKRSV 223
BLAST of mRNA_F-serratus_M_contig1.16.1 vs. uniprot
Match: A0A7S2YQL4_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YQL4_9STRA) HSP 1 Score: 114 bits (284), Expect = 8.280e-26 Identity = 71/175 (40.57%), Postives = 91/175 (52.00%), Query Frame = 2
Query: 683 SLALARQLLEEEAMASYAAAVDMFRNGGNGRGAXXXXGMAALEGIASEDXXXXXXXXXXXXXXXXXVAMAEDE--SLDYDGMLELGSAIGDVRQERWRLRCETVISSLPRMKYAAGRIAGD----DVKCLVCQCDFEGGEELRELPCKHAFHTDCVDGWLAQNEECPTCRRSISE 1189
SL LAR L+ EEAMASY +V R+ R ALE E+ VA EDE +L Y+ ML+LG IGDV+ ERW + + I+ LP + +I D + KCLVCQ ++E GE LR LPC H FH +CVD WL + + CP CR +I E
Sbjct: 9 SLELARMLMAEEAMASYQHSVQYLRDS---RDQLSQEDYQALEAALQEEEAEQEGAA---------VAELEDEEGNLSYETMLQLGERIGDVKSERWTVVAQKHIAKLPTEIFDNNKIKKDADDSESKCLVCQHEYECGENLRRLPCGHCFHMECVDQWLERTDLCPYCRTAIRE 171
BLAST of mRNA_F-serratus_M_contig1.16.1 vs. uniprot
Match: A0A7S1YU58_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YU58_9STRA) HSP 1 Score: 116 bits (290), Expect = 2.200e-25 Identity = 64/170 (37.65%), Postives = 89/170 (52.35%), Query Frame = 2
Query: 692 LARQLLEEEAMASYAAAVDMFRNGGNGRGAXXXXGMAALEGIASEDXXXXXXXXXXXXXXXXXVAMAEDESLDYDGMLELGSAIGDVRQERWRLRCETVISSLPRMKYAAGRIA------GDDVKCLVCQCDFEGGEELRELPCKHAFHTDCVDGWLAQNEECPTCRRSI 1183
LARQ++ EEAMASY + + R+ + + +AAL+ +E+ L YD +L LG +GDV+QERW + + IS LP K++ A +VKCLVCQC +E G+ LR LPCKH FH +CVD WL + CP CR++I
Sbjct: 135 LARQMMAEEAMASYNMSANFLRDHADNYSSED---LAALQAAMAEEDSEEEEFDE-----------GPSAELSYDTLLRLGERLGDVKQERWAMVAKEQISKLPTFKFSTCEEATLKDRDDSEVKCLVCQCPYEEGDLLRRLPCKHCFHAECVDQWLMNKDVCPYCRQAI 290
BLAST of mRNA_F-serratus_M_contig1.16.1 vs. uniprot
Match: A0A1E7FQW7_9STRA (RING-type domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FQW7_9STRA) HSP 1 Score: 110 bits (274), Expect = 1.230e-23 Identity = 60/175 (34.29%), Postives = 91/175 (52.00%), Query Frame = 2
Query: 683 SLALARQLLEEEAMASYAAAVDMFRNGGNGRGAXXXXGMAALEGIASEDXXXXXXXXXXXXXXXXXVAMAEDESLDYDGMLELGSAIGDVRQERWRLRCETVISSLPRMKYAAGRIAGD------DVKCLVCQCDFEGGEELRELPCKHAFHTDCVDGWLAQNEECPTCRRSISE 1189
S+ LAR ++ EEAM +YAA +D R+ + +AA + +D ++ + Y+ ML+LG IGDV+ ERW R + I +LP +K+ +I D KCL+CQ ++ GE+LR+LPC+H FH +CVD WL + CP CR S+ +
Sbjct: 79 SIELARAMMAEEAMGAYAAHMDYLRHN---QDQFSEEDLAAFQIAMDDDEQEANTINDTEEDNGQDIS-----GMSYEAMLQLGERIGDVKTERWARRAQKTIDTLPIIKFDREKINNKTNTNQCDTKCLICQEEYCTGEDLRQLPCRHCFHQECVDQWLLTKDFCPYCRTSLEK 245
BLAST of mRNA_F-serratus_M_contig1.16.1 vs. uniprot
Match: A0A1Z5KIZ8_FISSO (RING-type domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KIZ8_FISSO) HSP 1 Score: 108 bits (269), Expect = 4.080e-23 Identity = 64/179 (35.75%), Postives = 88/179 (49.16%), Query Frame = 2
Query: 668 DAEAASLALARQLLEEEAMASYAAAVDMFRNGGNGRGAXXXXGMAALEGIASEDXXXXXXXXXXXXXXXXXVAMAEDESLDYDGMLELGSAIGDVRQERWRLRCETVISSLPRMKYAAGRIAG-------DDVKCLVCQCDFEGGEELRELPCKHAFHTDCVDGWLAQNEECPTCRRSI 1183
DAE S+ALARQL+ EEAMASY ++ + + AL+ ED V E + Y+ +L+L IGDV+ ERW R I+ LP +++ + KCLVCQC++E GE+L LPC+H FH DCV WL + + CP CR+ I
Sbjct: 58 DAEEESIALARQLMAEEAMASYQSSFQLLQQHAT---QFSPEDYQALQAAMMEDDDQLAQLNDE-------VDEDEGDGSAYETLLDLSERIGDVKAERWSWRAPHEIAKLPSFVFSSVATPSAVTTRDDSECKCLVCQCEYENGEQLCRLPCQHTFHMDCVQPWLMKKDVCPYCRQCI 226
BLAST of mRNA_F-serratus_M_contig1.16.1 vs. uniprot
Match: A0A7S0GIG7_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GIG7_9STRA) HSP 1 Score: 107 bits (266), Expect = 5.140e-23 Identity = 62/173 (35.84%), Postives = 87/173 (50.29%), Query Frame = 2
Query: 683 SLALARQLLEEEAMASYAAAVDMFRNGGNGRGAXXXXGMAALEGIASEDXXXXXXXXXXXXXXXXXVAMAEDESLDYDGMLELGSAIGDVRQERWRLRCETVISSLPRMKYAAGRIAGD-----DVKCLVCQCDFEGGEELRELPCKHAFHTDCVDGWLAQNEECPTCRRSIS 1186
S ALAR L+ EEA+ASY+ + F++ + + +AAL+ ED A + L YD +L LG IGDV+QERW +I + + + D KCL+CQ +E + LR LPCKH FHTDCVD WL + + CP CR+S++
Sbjct: 39 SEALARLLMAEEAVASYSMSSTFFQDNADNYSSED---LAALQAALEEDEFDENEIEED--------ADVDTSDLSYDALLMLGERIGDVKQERWTHIANGIIDKMRVSTFCKSDTDEETSHDCDEKCLICQFPYEDNDTLRHLPCKHTFHTDCVDKWLQKKDFCPYCRQSVA 200
BLAST of mRNA_F-serratus_M_contig1.16.1 vs. uniprot
Match: A0A7S2P243_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P243_9STRA) HSP 1 Score: 106 bits (264), Expect = 1.630e-21 Identity = 47/101 (46.53%), Postives = 61/101 (60.40%), Query Frame = 2
Query: 893 EDESLDYDGMLELGSAIGDVRQERWRLRCETVISSLPRMKYAAGRIAGDD----VKCLVCQCDFEGGEELRELPCKHAFHTDCVDGWLAQNEECPTCRRSI 1183
ED L YD ML + +GDV+ ERW L+ + I LP+ Y + KCLVCQC +E GEELR LPCKH FH++CVD WL+ + CP CR+ +
Sbjct: 234 EDSELSYDTMLRIAERVGDVKTERWVLKSKDEIEKLPKFVYEGHEKIKEHNDSTSKCLVCQCPYEMGEELRALPCKHCFHSECVDHWLSTKDFCPYCRQPV 334
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 213.4 |
| Seed ortholog evalue | 1.5e-52 |
| Seed eggNOG ortholog | 2880.D7FY13 |
| Preferred name | RLIM |
| KEGG ko | ko:K15701,ko:K16271 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000122,GO:0003674,GO:0003824,GO:0004842,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006355,GO:0006357,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0007549,GO:0008150,GO:0008152,GO:0009048,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010498,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016567,GO:0016740,GO:0019219,GO:0019222,GO:0019538,GO:0019787,GO:0019941,GO:0030163,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032446,GO:0036211,GO:0040029,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043433,GO:0043632,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051090,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051603,GO:0060255,GO:0060816,GO:0061630,GO:0061659,GO:0065007,GO:0065009,GO:0070013,GO:0070647,GO:0071704,GO:0080090,GO:0140096,GO:1900095,GO:1901564,GO:1901565,GO:1901575,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 |
| EggNOG free text desc. | protein modification by small protein conjugation or removal |
| EggNOG OGs | KOG4628@1,KOG4628@2759 |
| Ec32 ortholog description | Zinc finger, RING-type |
| Ec32 ortholog | Ec-08_004670.1 |
| EC | 2.3.2.27 |
| COG Functional cat. | O |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko01000,ko04121 |
| Exons | 8 |
| Model size | 1641 |
| Cds size | 894 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622928774.7859643-UTR-F-serratus_M_contig1:412714..413160 | 1622928774.7859643-UTR-F-serratus_M_contig1:412714..413160 | Fucus serratus male | UTR | F-serratus_M_contig1 412715..413160 - |
| 1690962563.300997-UTR-F-serratus_M_contig1:412714..413160 | 1690962563.300997-UTR-F-serratus_M_contig1:412714..413160 | Fucus serratus male | UTR | F-serratus_M_contig1 412715..413160 - |
| 1622928774.8853767-UTR-F-serratus_M_contig1:421426..421727 | 1622928774.8853767-UTR-F-serratus_M_contig1:421426..421727 | Fucus serratus male | UTR | F-serratus_M_contig1 421427..421727 - |
| 1690962563.3967872-UTR-F-serratus_M_contig1:421426..421727 | 1690962563.3967872-UTR-F-serratus_M_contig1:421426..421727 | Fucus serratus male | UTR | F-serratus_M_contig1 421427..421727 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622928774.8050163-CDS-F-serratus_M_contig1:413160..413231 | 1622928774.8050163-CDS-F-serratus_M_contig1:413160..413231 | Fucus serratus male | CDS | F-serratus_M_contig1 413161..413231 - |
| 1690962563.3140242-CDS-F-serratus_M_contig1:413160..413231 | 1690962563.3140242-CDS-F-serratus_M_contig1:413160..413231 | Fucus serratus male | CDS | F-serratus_M_contig1 413161..413231 - |
| 1622928774.8131301-CDS-F-serratus_M_contig1:413703..413780 | 1622928774.8131301-CDS-F-serratus_M_contig1:413703..413780 | Fucus serratus male | CDS | F-serratus_M_contig1 413704..413780 - |
| 1690962563.3240087-CDS-F-serratus_M_contig1:413703..413780 | 1690962563.3240087-CDS-F-serratus_M_contig1:413703..413780 | Fucus serratus male | CDS | F-serratus_M_contig1 413704..413780 - |
| 1622928774.8215668-CDS-F-serratus_M_contig1:414155..414227 | 1622928774.8215668-CDS-F-serratus_M_contig1:414155..414227 | Fucus serratus male | CDS | F-serratus_M_contig1 414156..414227 - |
| 1690962563.3329036-CDS-F-serratus_M_contig1:414155..414227 | 1690962563.3329036-CDS-F-serratus_M_contig1:414155..414227 | Fucus serratus male | CDS | F-serratus_M_contig1 414156..414227 - |
| 1622928774.831028-CDS-F-serratus_M_contig1:414900..414959 | 1622928774.831028-CDS-F-serratus_M_contig1:414900..414959 | Fucus serratus male | CDS | F-serratus_M_contig1 414901..414959 - |
| 1690962563.3436124-CDS-F-serratus_M_contig1:414900..414959 | 1690962563.3436124-CDS-F-serratus_M_contig1:414900..414959 | Fucus serratus male | CDS | F-serratus_M_contig1 414901..414959 - |
| 1622928774.8438807-CDS-F-serratus_M_contig1:416323..416521 | 1622928774.8438807-CDS-F-serratus_M_contig1:416323..416521 | Fucus serratus male | CDS | F-serratus_M_contig1 416324..416521 - |
| 1690962563.3567407-CDS-F-serratus_M_contig1:416323..416521 | 1690962563.3567407-CDS-F-serratus_M_contig1:416323..416521 | Fucus serratus male | CDS | F-serratus_M_contig1 416324..416521 - |
| 1622928774.857254-CDS-F-serratus_M_contig1:417221..417436 | 1622928774.857254-CDS-F-serratus_M_contig1:417221..417436 | Fucus serratus male | CDS | F-serratus_M_contig1 417222..417436 - |
| 1690962563.3660312-CDS-F-serratus_M_contig1:417221..417436 | 1690962563.3660312-CDS-F-serratus_M_contig1:417221..417436 | Fucus serratus male | CDS | F-serratus_M_contig1 417222..417436 - |
| 1622928774.866932-CDS-F-serratus_M_contig1:420539..420669 | 1622928774.866932-CDS-F-serratus_M_contig1:420539..420669 | Fucus serratus male | CDS | F-serratus_M_contig1 420540..420669 - |
| 1690962563.3740225-CDS-F-serratus_M_contig1:420539..420669 | 1690962563.3740225-CDS-F-serratus_M_contig1:420539..420669 | Fucus serratus male | CDS | F-serratus_M_contig1 420540..420669 - |
| 1622928774.8760724-CDS-F-serratus_M_contig1:421354..421426 | 1622928774.8760724-CDS-F-serratus_M_contig1:421354..421426 | Fucus serratus male | CDS | F-serratus_M_contig1 421355..421426 - |
| 1690962563.3832693-CDS-F-serratus_M_contig1:421354..421426 | 1690962563.3832693-CDS-F-serratus_M_contig1:421354..421426 | Fucus serratus male | CDS | F-serratus_M_contig1 421355..421426 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1.16.1 >prot_F-serratus_M_contig1.16.1 ID=prot_F-serratus_M_contig1.16.1|Name=mRNA_F-serratus_M_contig1.16.1|organism=Fucus serratus male|type=polypeptide|length=298bp
METPGRTNHHTALVESQNILQDEPVGANPSQHSSYTKSSSMDSKISSGVS CASAAAAAATADVVAVEAAKPATGVEESQSTARAGAGTRAAAPSASVAAA EESGRGSPERAGDPGAGEVAGEDAEAASLALARQLLEEEAMASYAAAVDM FRNGGNGRGAGEGEGMAALEGIASEDMAAMQALLQEDENASNAVAMAEDE SLDYDGMLELGSAIGDVRQERWRLRCETVISSLPRMKYAAGRIAGDDVKC LVCQCDFEGGEELRELPCKHAFHTDCVDGWLAQNEECPTCRRSISET* back to topmRNA from alignment at F-serratus_M_contig1:412715..421727- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig1.16.1 ID=mRNA_F-serratus_M_contig1.16.1|Name=mRNA_F-serratus_M_contig1.16.1|organism=Fucus serratus male|type=mRNA|length=9013bp|location=Sequence derived from alignment at F-serratus_M_contig1:412715..421727- (Fucus serratus male) CTAAAAGCAGTCTTCACATCTTTTGAGCCGGCGGACACCTGGAACAGGAC
AAAAGCACAAGGGAGAAGTTTTGGCCTTCTAGATAAGAGGATCATCGCCT
CCACCGGCGGACGTCGCACACCAGAATCATCGTGTTTGATCGAAAGAGTC
CGCTTGCTGTGTTTTGCTGGGTTTGGTGACCTGGTGGTGTTCCAGCGTTC
CGTTAGTCGATCCCGTTCGGGATTTTGGACTTTCCGACCTGCCTCGGGAA
TTTACAACGGCCACCATCTCAAGCCGGCAAGAGGTCTACTCGCCTACAAA
AATGGAGACTCCGGGGCGAACGAACCATCATACTGCGTTGGTGGAGTCGC
AAAATATCCTCCAGGATGAGCCGGTGAGTATTGGCCTCGGTGGCACACGT
GTGTACGGTTATTGTCTTTAAATCCTTTTCGGAATCCGTATACTTATCCT
GAAACCTACATCCATCCACTCGAGACGCAGGAGTCGACCGAGCTACAGGT
TCGCAAGTTAATAATTAAACTTGAGGATTCAAAAGCGGCTTCGCGATGTA
GGCATCTGCCCGAGGATCCCAACCGCCGGCAGCTAGCACGTTTGCCGCAC
ACCACCCACGAAGCGTTCCGACGTTCGTAGATATAAAACTGCTGTTCAGT
CAGTACATCAGTGCCCAGGTGCCCCCGGGTCGATTTTGAACAACGCTAAT
CTCCCATGAGGCCATTTTACTTGTTTTTACTCCATAACAGTTGTACCGGT
TGAGCCGATGGGCGCCTGCCTACCCACATCGCTTTACACATTCAGCTCAC
TCCTCGTACGTACCGTCGCAGCATCCCGTGAAGACGCGTGGCTCGCAGCA
TCCCACGTGTCTCTATTATCAGATTCACGATGGGGGAAGAAGCACCAAAC
AGACAGGAAAACCCCCAAGCATAAGGATACCTGTTTCCCTCTGGCATTCT
TTTCAGCTGCAGAGAAAAACGAAATCATGGCATATTAGAAAGCTCGGATC
CCTTCTTCCTTCCTTCTTCTTACCTTCGTTGTCATTCAAAACCCTCGCCT
TGTTTCAGGTCGGCGCAAATCCATCACAGCACTCTTCCTATACCAAGAGC
AGCAGCATGGACTCGAAGATCTCTTCCGGTGTCTCTTGTGCTTCAGCCGC
CGCTGCGGCGGCTACTGCTGATGTTGTCGCGGTCGAAGGTAGGCATGCAA
GGAGGTTCCGTTGCCACTCTTCAAGACGAACTACCGGTAATTGTCTATCT
AGTACAGAGTATGCCGACTGGGCCGGTACACCAAAATGCTGAGCGGAGAA
GGAAGAAAAACAAAAACAAAATTATGTTGTGACGATGCACTGCTTGTTGT
ACACTTGAAGCACAGAGTACCAACCAGGTCGCCCCGGTAGCTCAGAGGTA
ACCTCGTAACCTTCTGACACGTTGGGACGTGAGTTCGAATCTCGTAAACG
GGATTTTTCCCACTAATATATACTGTATAGTATATATATATATATATAGA
TACCCAACAAATGGAGAACGATCGAATCGTTAGTACACAAAATTCGACTT
CACGGTCGAAGAGGGAAAGGAACAGCTGAATCCTTCTCGCGAGAAAAATA
AAGGCACGCACCGCAGAAGGAAGGTGGATGAGAAATCCTGTGTGACCTTC
CTCCTGTGTGACCCCGGCTGGTACGTCCAACGAACTTGGTGTATCATACA
GATTAAATGAGAAGAAAACATACTCGTATAAAACACACACCCAAGAAAAA
TAAGAAAAGTCAGGTGAATGGTGGGTGGAAGCGCACGCGAAAGAAACCCA
TCATTACACGCGACAGGGACGTCTCAAAGATGAAGGCACGCTGCTGTGCG
TACCTGTAGAGAGAGACATGCAGTGCGACAGACCAATAGAGCTAGACATC
ATGCAGAAGCAGAGCTACTCGTAAGGCTGCAGTGTGTAGGCAGTATGCAT
CTAAACTGCGTGTTCATAAACCGTCAGCATCCTAATAATATTAGGCTCTA
CAGTAGTAGGATACAGTATGCTGTTGATGGCAGTATCCATTCAAACACGG
GTAATTGGTGCTATTCATAGGACATTGTATCTGTGATTCTGGTGTGAGTT
CTTGGTTTGAGATCTGCTGCGGGCAGTGAGTGTATCTTGGTTCGTTGGTT
TGAAGTCGCCCTTACAAAGGCAGGCGCTACGAAAGCGCGCCTCGTCGATC
CATCCAACCGCAACCTCGAGCACCACAGCAGCGTTCTCCAACGCCTTTCG
TTATCCTTCCCTACTTTTTTTTGCCCTACCCCCTGTTCTTCTTTCTTCCT
CCAACCTCCAAGCCTCCAAGGGCCAATGGTAAAGCTCCTCCCCCCTCCAT
CCCCCTCGTCCCTCTTAACAACATTGTTACTATACTGTACTGTACTAGTA
CTGTTCGCCCTTGTGTAAGGCTTGGCCAAGGAATTCCAAGTCTCCCGAAA
CACCGAAAGCTTCGACATCCTTCTACGCTCAGCCTGCCCACTATTTCCCA
TTCCCTCCTCGACCCCTTGCTCCTCGCGTCACCTAGGGCCAATGCCCCAG
AGATGAACCGCCGGGGTAAAAGCTCTTGCCAGCGGGCGTGCTCGGCGTGC
ATTCGTCCCTATGGCTTGGTCTCCTAGATGACCTCCCGCATTAGGCCCTG
TCTCAACGAACGACTAGATAGAAAAAAGTTCTTAGAATCTGTCGGGTGAT
AAATTCCGTCAACAGGTCCTACTTTGGGTCCAAACGACCATATTAGGCAA
TGCGGTGTCACTAGACAGTCACGCCTCCGAATCATTTTCAACACCTACAC
ACTGGTGAGGGCGGACAGCGTAACGAGGTTCGATATCGCTCGAACCTCGA
CCTTGCGCCCTCCTCGAAGCTCCGCTACTATGACAGGCGCTCGGCGAGCG
GACATTCAAGCCTCCCCATAAACCGTGACTTGACTTGTCAACAAACTGCA
ACAAACTACTTACTACGTACAACCAAAGTAGGGCATTGACGGAGCACCAG
AGGTTTCTTGGCGTTTCACAAGCTCCTAAAACGGTTTAGGAAATCCCGAC
TGCTCGAGCAGTGCATGGTACCTCGCGCGTTGTTTGTGGGTGTCGAGAAT
ACATCAAAATCGGTGTACGCGTCGGACTCGCAATCGCTGTTGTCCAGACC
CAGCGTCAACGGCACGTACTTTAGAAATACCCAAGAAAACCATCTACTCG
GGTATCAGTTAAACTGATTGCAGTACGTAGCAGCTGTTGTCTTTTTTTTT
ATCGGTATCAGTTGTATTACTGCTTCCAGTATTTAGCAGCTGATGCCCTT
TTATTTTTTGGTCTCAGTTGTTCTGTTTCTAGTACGAAGCAGGTGTGTGT
GTGTGTGTGTGTGTGTTTTTTTTTCTTGCCCTCGAATCATTTCGCACAAC
AGAATTTACCTGAAACAGAAAAAAAATGTCGGTGGACAGATTATATTAAA
TGTCAAAAGTTAGAATCTGTCCACCGCCAGATTCTGTCGTGTTGTGCCGA
CTAGTATTAATAGTGTCGAGCTCAATTTGGCCAATCACAGAGCTCTATTT
TCAACAGATTATTTCGACAGATTCTATGAACAAGTTCTATCTCGTCGTTA
AGACAGGGCCATCGACATTTTATTTTATTTTTTACCGAATGAGTCAGCGC
GTACTTGTAGACCGACCAAGATTTGTAGGGGGAGCACAAGGCACTCAGGG
GTCAAGTAAGAATTGTACAAGTAGAGATGGTGTGTCCCTTCTGTCGCGTC
TGATCAGATATTTTCGTAATAAGTATCACTGATCCCCCCTTGGGAGGATC
AATGCGAGTGGCATAGGATGACAGGACCGGATTGCGCGGCTATGTGCAAT
TTAATAAATACACGCACACACACATACACAAAACAAATGTCCTTACAAGT
AGGGACGTTTCAAAATAATTGGGCCGAGTTGTTATTACTTCAGCAGATTG
GGTATCAACCGTGTACATTTTACATTTGCGAATTCTGGAGAAAAAAAAAT
CTGTCTCTCTCTTTGTTATTCATATTTACCAAAGTGATACTTATTTGAGC
AATGAACAAAATTGATAATAAGTTTGCGTAGGCAAGTGCTCGCGCAAGCG
AACGTGGCTCGTCCAAATCCATACCAGGCACCAGGTACAATTTATCAGAT
ACTAGTTTTATATTAATACTGTACTCAAGTATTGTTAAACAATACCACCC
CTTTTTGCGTCGCCCCCATCCCTCCCCCCACCGCACGCTACGGTGACGTC
ACTCCAAACTGTCGACATATAAATTACCTTGCGGGCCGCAGCGGCAAAGC
CAGCGACGGGAGTCGAGGAGAGTCAGTCCACGGCTCGCGCAGGGGCAGGG
ACAAGGGCAGCAGCGCCTTCGGCTTCCGTCGCCGCTGCAGAAGAAAGCGG
GCGCGGAAGCCCCGAGCGTGCAGGCGATCCTGGTGCGGGCGAGGTGGCGG
GGGAGGACGCGGAGGCCGCCTCCTTGGCGCTGGCCAGACAGCTACTCGAA
GAGGAGGTATGGGTCTGGTTTGTACTCGGAGCATTAGGTTTGGCTGCCTC
GATCAACTCATCTGTTTTATAAACACCGCCTCAACCTGGTGTTAATATGT
TTTTTTGTTTTGTTTTGAGGATCGTGATGAAGAATTAAATAGAAACAGTG
TATTTTTCTAGGGGGGGGGGGGTGAATGAAGAAATCGTGAATCGACTCTC
ACTATCCGAGGCTTACCGATCGAAGGGTTTGTTACTTATTTCTTTCAGTT
AGCATCTTTAAAAAACGCTGTGTTTTTATGGTCACGTTTTTTATTCATTT
TTTCATTTATAGTATTTGTACCAGTTATATTCTATTTTATATTTTTTCAT
TTATTGCATGCATTCGTTCATTCATTTTTTGTGTGCATTGTTATTATTAT
TATTTGTTTTTATTTCATTTACAGTAATTTTACCAGTTACATATATACAC
CTACAGTATATACATTTTCATTTGTTGCATGCAATCGTTCATTCATCCGT
TTATTCATTTTTTAAGAGTAGATTTGCATTGTTTCGTAACGGAATCATTA
TAATTATTTGTTGACTTTATTTGTCTTGCATTATTTGTCAACCGGGGAGA
GATGGGAAGATCCTTTGTGATAAACCATCGACTATCCATTATTGTCATAT
TATAAACAGCATCCATTACTCCTTTTTATCTCTCATGCCTGCGGCTGGTC
GATCAGGCGATGGCCTCTTACGCCGCGGCGGTGGACATGTTCCGCAATGG
AGGGAATGGGAGAGGCGCTGGTGAAGGCGAGGGCATGGCCGCATTGGAGG
GAATAGCCTCCGAGGATATGGCGGCGATGCAGGCCTTGCTGCAGGAGGAC
GAGAATGCCTCGAACGCGGTCGCGATGGCGGAAGACGAGTCGCTAGACTA
CGACGTGAGCCATCCGACCACAGATGTGGGAAAGGAAAAAGAAAGATTCA
AAATAATCTTAGGAACACGGCGCGTCGCAGATGTATAGTGTATAGTGTAT
AGTGTATAGGCCATATCGAACAAGATAACATCATTTTTTCTTCTTGTTGG
GAGCAAATAGGCCATATCGAAGTACTCATACCTGGTGTAAACGAAAAAAC
ACAAATTCTGCATAGAATCGAACTAGACTACTAGCAGTCAGTGATTGACG
TAGTACAGGTCTTTTGTGTCCGAGTACATAACACATGTTTTGCTGGTACA
GGCGGTTACTGCACGCAGCTTCCGCACGTATATATATATATATATGTGTG
TGTATAATTATTTTGCTAATTTTTGACGATTCCGCTTACTAAGTTTCAGT
GTCAATTTTCATCCGAAATAGTATTCATGGCCTCCTCGAGCCGGCAAAAA
AAATGAGCAGCCGCACCGATGGAACAAACTGTTAATGTTAAAGTTAACAA
GTGATTGTATGCAAAGCATGCTGGTACGATGTTTTTTTTGTTTTTGTTTT
TTATCCCCAGAAGACCAGGGGTAAAAAATGGCCGCCACCTTCCACCCGTG
GTACAGTACGATGGTTGACCCTGAGGTATCCCCGGAACAGACATGCATCC
TGGGAAGGTTTCCAGTGTGTTTTGGGTCCGTTCGTCCAGATAAAAAGGGC
ACACATGGATTGTGGCGAGGTTCCTTGTCCGCATCCCTCTGACTCACGCC
GTGAAGCGAGTTCGTCAGGGCTTTTGCCTCCAGAGCAACCTCGCGCGGCA
ATATATCACATCAGCGTCGACGATGGTTACTATTTATTGTTCTCTCTCTT
TTGTGAGAGATGGTATTTAAAGAAAATCTGTACTATATAGTGATCGTCGA
CTTGAAAAAAAAAAAAACGGCTGGCGTAGCGTAACGTATTAAACTCGAAA
CCCTTTGTTTTACTATTATGTTTAATACAGTAGTACTTCGTAGCAACAGC
GAGTTGTGTTAGCCGTATTAGGTAAAGTATCGCTGGTGTAGTTCACTCAC
GTCTTTTTCTCGAAAGTCTCTTTTCTTCGTCTCTTATTTATCCCATATAA
AGTCATAGTCTACACGCATATACCCTGTCGGCAATGTAGATGATTGGACA
AAAGGCTGCCTCCCTTCCATGCCATATGATTCAACTGTGACCCCCCCCCA
AAAAAAACTGAAAAAAAAACTCAGAAAATACAAAAATAAGCTTTCTTTTC
TGGGCGCTCATCACCAGTCATCGTTACTTTGAGCAGCAGCTCGACCGCCC
GCATCCCTATCTCGGGAACCCGACGCGCGAGTTCAAAGCTGCTTGGCTTT
CCTTCGCTGTGTCGGCAGGGCATGCTCGAGCTCGGAAGCGCCATCGGCGA
CGTTCGCCAAGAGAGATGGCGATTAAGGTATGGTGTGCTTCCGAGTGGGA
GAGTAGATAACCTCGTATTACATTTATAGTTTGGCGATATAATAGTGCGA
ATTTCGTGAATTCGAAGGTTGACAGAATAATTTCTTCTATTTTGGTTTCC
GTGGCCGAAAGCATCCGAACGTGAGTAGGTAAAATTTAAACATTGGTCGA
CGAGTTGTAAGATTGCTGAACTTGCATTGTGATTAAAAAAAATCGTTGGC
GAGAAGCGGGTAGAGATGGCAAGATAGATAGATCCTTAAGTGACCTCAGG
CAAGATGGCAATTTTGCAGTACGTGGGACTGGTAACCCAGTACGTTGAGG
ACCATCGACTGTGTAGGTGAGATACAGCAAGTCGTGTACAACGCTGTGCT
TGCCACCGTTGGGCAGTTTCTTGTCCCGCGTCGGAGTAGGATCACGCGTG
GATAATGTACGAGCGCGAACGCTCGTGAGCGTTGCGCAGCACGCCTTTGT
GGAGAACTCCCCCCCCCCCCCCACACCCCCCGATGCGATATTTTTGGCAG
AGTTTTCGAGGATGCTTCATTCACGCTTCTACTTGTCACGCCGGTCACGA
GCCCATTGATGCCGTGCTCCCAACCTCCCCCCCCTCCATATCCGATCTAA
CCGTGCGGGTTGTTTTATTGTTGGCCTGTTTCTTCCTTTTTTCGCTCCAG
ATGTGAAACGGTCATCAGCAGTCTTCCCCGGATGAAGTATGCCGCCGGTA
GAATTGCCGGCGATGACGTCAAGTGAGCGCTCTATGCCTTTTAAGGTCGA
GTGTACTTGTATTGGCTCTACCGAATAGACATCGTTATAGATTTTCTTTT
CGGCTCACCGATTTTGGAACACGCCTTCTTCGGGTTTCTTAGAGAGTTCA
AAGGCGAGGACCAACATGGTAGCAGGACCTGTTAAGCGCGGCTTACCCGT
GAGGTTACTATCCTGGAAAGAGTAAAATGAGCCTTGAGTCGTCCCAGACG
GACCTGATCTCGCGGCTCAACAGCGTGCCCTAAAGGTGATCCTGGGATCG
GGAGCTTGAAGTCCATTCCCTGCTCGGAAGAGAAGGCCGCCGTGTTACAT
GGGACTAAACGCTGCAGCTGCACATTGCGTGCACCGTTTTCACCCAGGTG
CCTGGTGTGCCAGTGCGACTTTGAGGGGGGCGAGGAGCTGCGGGAGTTAC
CGTGCAAACACGCCTTCCACACCGGTGAACACCAGACCAACCCGTTGCCA
GCTGAATAGTCAAGCGCTCGTTCTGACTCGCTCGCCCCCTCATCCCGAAC
CCTAAACGCCTCTCCAGACTCGATAGTACTGTATTAAAAAGGCAACTACG
ACGTGACAACTAGGCTACTGTACCAGTAGATATGTTTAACCGTTATTGTC
GTGTATCGCCGTACGATACGAGTACATGATTTCGTAGCTTTCGGAGGGAG
AGTGGCAAGTGTCGAGAAATTTATTGATAGGGGGATCAAATTTGTCGGCC
TTTTGTCATTTGTAACCCCCGCCCTCATCCAAAAAAACTATATAAACATA
TCAAAATCCGACTAGGCTAAACATAATTTTGCTCCTCTCTTAAGACATAC
CTGGTACGAAGTAATAGTTTCCCGTCTCGCGCCTGTTGTCCTTGTACCCC
CCCCCCCCTCCGCGCCATCTTGGGTTGATTCCTACCTCGTCGCTAGACTG
CGTGGACGGGTGGCTGGCACAGAACGAGGAATGTCCAACCTGCCGACGAT
CTATCTCGGAAACCTGATGACGAGAAGTCAGGATTGAGCCGCTACGCTTC
TCTTTTACCCGTCGATTCCTAAAATGTACTTGGAATGTGTAGCCCTATTT
ATGGGCGACGAAAACTTAAGACGACGCGGGAGGGCTGCGCGTTGTTGGCC
GAGACTATTGAGTGTTGCTGCTGCTGTTGAAGGGAGCGGGGGGGAGGGGA
GGACAGATCTTTATCCTTCCGCCCTGCTGATTTTGCTCGCCTGGTAACGT
GCGCGTGTCCCGCAAAACAAAGGAATGGTCCTCTTATCTCGTACTCCTGT
ATAGACTACATACAGAATAGCGCGCTCACGCACACACAAACATCATACCT
GGTATATATTTTTTGCTCGAGGATACAAAATTATGTCACTATGAAATATA
TGCCCGTAATAGTGCTGCGCTGTATGCCGAGGGGGACGGGGGGGGGAGAA
AATACTATCAGCA back to topCoding sequence (CDS) from alignment at F-serratus_M_contig1:412715..421727- >mRNA_F-serratus_M_contig1.16.1 ID=mRNA_F-serratus_M_contig1.16.1|Name=mRNA_F-serratus_M_contig1.16.1|organism=Fucus serratus male|type=CDS|length=1788bp|location=Sequence derived from alignment at F-serratus_M_contig1:412715..421727- (Fucus serratus male) ATGGAGACTCCGGGGCGAACGAACCATCATACTGCGTTGGTGGAGTCGCA AAATATCCTCCAGGATGAGCCGATGGAGACTCCGGGGCGAACGAACCATC ATACTGCGTTGGTGGAGTCGCAAAATATCCTCCAGGATGAGCCGGTCGGC GCAAATCCATCACAGCACTCTTCCTATACCAAGAGCAGCAGCATGGACTC GAAGATCTCTTCCGGTGTCTCTTGTGCTTCAGCCGCCGCTGCGGCGGCTA CTGCTGATGTTGTCGCGGTCGAAGGTCGGCGCAAATCCATCACAGCACTC TTCCTATACCAAGAGCAGCAGCATGGACTCGAAGATCTCTTCCGGTGTCT CTTGTGCTTCAGCCGCCGCTGCGGCGGCTACTGCTGATGTTGTCGCGGTC GAAGCGGCAAAGCCAGCGACGGGAGTCGAGGAGAGTCAGTCCACGGCTCG CGCAGGGGCAGGGACAAGGGCAGCAGCGCCTTCGGCTTCCGTCGCCGCTG CAGAAGAAAGCGGGCGCGGAAGCCCCGAGCGTGCAGGCGATCCTGGTGCG GGCGAGGTGGCGGGGGAGGACGCGGAGGCCGCCTCCTTGGCGCTGGCCAG ACAGCTACTCGAAGAGGAGCGGCAAAGCCAGCGACGGGAGTCGAGGAGAG TCAGTCCACGGCTCGCGCAGGGGCAGGGACAAGGGCAGCAGCGCCTTCGG CTTCCGTCGCCGCTGCAGAAGAAAGCGGGCGCGGAAGCCCCGAGCGTGCA GGCGATCCTGGTGCGGGCGAGGTGGCGGGGGAGGACGCGGAGGCCGCCTC CTTGGCGCTGGCCAGACAGCTACTCGAAGAGGAGGCGATGGCCTCTTACG CCGCGGCGGTGGACATGTTCCGCAATGGAGGGAATGGGAGAGGCGCTGGT GAAGGCGAGGGCATGGCCGCATTGGAGGGAATAGCCTCCGAGGATATGGC GGCGATGCAGGCCTTGCTGCAGGAGGACGAGAATGCCTCGAACGCGGTCG CGATGGCGGAAGACGAGTCGCTAGACTACGACGCGATGGCCTCTTACGCC GCGGCGGTGGACATGTTCCGCAATGGAGGGAATGGGAGAGGCGCTGGTGA AGGCGAGGGCATGGCCGCATTGGAGGGAATAGCCTCCGAGGATATGGCGG CGATGCAGGCCTTGCTGCAGGAGGACGAGAATGCCTCGAACGCGGTCGCG ATGGCGGAAGACGAGTCGCTAGACTACGACGGCATGCTCGAGCTCGGAAG CGCCATCGGCGACGTTCGCCAAGAGAGATGGCGATTAAGGGCATGCTCGA GCTCGGAAGCGCCATCGGCGACGTTCGCCAAGAGAGATGGCGATTAAGAT GTGAAACGGTCATCAGCAGTCTTCCCCGGATGAAGTATGCCGCCGGTAGA ATTGCCGGCGATGACGTCAAATGTGAAACGGTCATCAGCAGTCTTCCCCG GATGAAGTATGCCGCCGGTAGAATTGCCGGCGATGACGTCAAGTGCCTGG TGTGCCAGTGCGACTTTGAGGGGGGCGAGGAGCTGCGGGAGTTACCGTGC AAACACGCCTTCCACACCGGTGCCTGGTGTGCCAGTGCGACTTTGAGGGG GGCGAGGAGCTGCGGGAGTTACCGTGCAAACACGCCTTCCACACCGACTG CGTGGACGGGTGGCTGGCACAGAACGAGGAATGTCCAACCTGCCGACGAT CTATCTCGGAAACCTGAACTGCGTGGACGGGTGGCTGGCACAGAACGAGG AATGTCCAACCTGCCGACGATCTATCTCGGAAACCTGA back to top
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