prot_F-serratus_M_contig13.2187.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig13.2187.1
Unique Nameprot_F-serratus_M_contig13.2187.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length792
Homology
BLAST of mRNA_F-serratus_M_contig13.2187.1 vs. uniprot
Match: D7FZG4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG4_ECTSI)

HSP 1 Score: 551 bits (1421), Expect = 1.970e-185
Identity = 328/634 (51.74%), Postives = 372/634 (58.68%), Query Frame = 0
Query:  164 LTRRMSGSGLTEKIGITRIPDRAWTIALDYLELGEASGRAYGMRCRQLGRVFRDIVEASLSVLALSGVKSITWATPENLSFLTRFKNVQTLHWYVGVGRPSDLGEENSDAAGAGAAPEASAASXXXXXXXXXXXXXXXAGGKEKLGGVTREKNVLEVADCNPVRAWAYLLGALPKIEEVIIVEGLETDESALEEVWLHLLPLCRNLRSFFLNFEDYSECPVDGDHPPINVKKFAVFLQARKPFPKLRELHLELGSMSITEQRSLIIGLGMSGLLPQLEKVTLGDGTTSYVRNPGRGPGRDLLTAFKRSPCARLKVLWLQRLDLWDDLESLASALGPEYCPVLEELFLDLALDTDDVVRLANCLHKFPRCLKTLGVLAVAIKDRTTEGQFVNHDPTPALQMLADALANHPRPNLQCLDVSLHYEP-------PDSADDAQPLVLTAPFEPREAVMPIIALFKTGKLTGLKHVQLSGCNLDDKGLLLACQSVATVKGIQTLDLSSNKLSKECAAQLAKALWRCRSLHEIVLEESVEEKDAQEVSSLFKEYMPWATVRVDDRESRRTQGRRSTAVHGQVNNE----AEEQAGGDDFMAENDDGDDNSHASDPADPHHWEDIDAESDGELPPELMADD 786
            ++RR SG    +++GITRIPDRAWTIALDYLELGE      GMRCRQLGR FRD VEASLSVLALSGV +ITWATP+NL+FLTRFKNV+TLHW                                              GG ++ G    EK  L VADC PVRAW+YLLGAL K                                                                                                     LEKVTLGDGTTSYVR+PGRGPGRDL  AF+++PCA+L+VLWLQRLDLWDDL++LASALGP +CPVLEELFLDLALDTDDV RLA CLHKFP+ LKTLGVLAVAIK+RT +GQF   DP PALQ LADAL  HPRP LQCLD+SLHYEP       PD  +  QP     PF+ R A MPII L K+GKLTG+KHVQLS C+LDD GL +AC++VAT+ GIQTLD+SSN+LS   A  LAKALWRCRSLHEIVLEESV   D   VS++FKEYMPWATVRVDDR+ R+   RR  A  G         A++Q   DD               D  DPHHWE +DAESDGE+PPELM DD
Sbjct:  116 MSRRASGLIFADRVGITRIPDRAWTIALDYLELGE------GMRCRQLGRAFRDTVEASLSVLALSGVNTITWATPDNLAFLTRFKNVRTLHW---------------------------------------------GGGADRYGAAAGEKT-LRVADCCPVRAWSYLLGALTK-----------------------------------------------------------------------------------------------------LEKVTLGDGTTSYVRSPGRGPGRDLFAAFRKTPCAKLRVLWLQRLDLWDDLDALASALGPAHCPVLEELFLDLALDTDDVERLAGCLHKFPKSLKTLGVLAVAIKNRTEDGQFEMADPEPALQRLADALCKHPRPTLQCLDISLHYEPEAEEELPPD--EPPQP----PPFKARAATMPIIRLLKSGKLTGIKHVQLSSCSLDDSGLAIACKAVATMTGIQTLDISSNQLSLTGAKALAKALWRCRSLHEIVLEESVVPDDTAAVSAVFKEYMPWATVRVDDRDGRKNLARRYLAAAGGQGQAYDALADDQGAFDDXXXXXXXXXXXXGGFDLMDPHHWEAVDAESDGEVPPELMMDD 590          
BLAST of mRNA_F-serratus_M_contig13.2187.1 vs. uniprot
Match: A0A6H5KYL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYL0_9PHAE)

HSP 1 Score: 469 bits (1207), Expect = 1.740e-156
Identity = 251/379 (66.23%), Postives = 287/379 (75.73%), Query Frame = 0
Query:  419 MSITEQRSLIIGLGMSGLLPQLEKVTLGDGTTSYVRNPGRGPGRDLLTAFKRSPCARLKVLWLQRLDLWDDLESLASALGPEYCPVLEELFLDLALDTDDVVRLANCLHKFPRCLKTLGVLAVAIKDRTTEGQFVNHDPTPALQMLADALANHPRPNLQCLDVSLHYEP-------PDSADDAQPLVLTAPFEPREAVMPIIALFKTGKLTGLKHVQLSGCNLDDKGLLLACQSVATVKGIQTLDLSSNKLSKECAAQLAKALWRCRSLHEIVLEESVEEKDAQEVSSLFKEYMPWATVRVDDRESRRTQGRRSTAVHGQVNNEAEEQAGGDDFMAENDDGDDNSHASDPA----DPHHWEDIDAESDGELPPELMADD 786
            MSI EQRSLI GL  SGLLPQLEKVTLGDGTTSYVR+PGRGPGRDL  AF+++PC +L+VLWLQRLDLWDDL++LASALGP +CPVLEELFLDLALDTDDV RLA CLHKFP+ LKTLGVLAVAIK+RT +GQF   DP PALQ LADAL  HPRP LQCLD+SLHYEP       PD  +  QP     PF+ R A MPII L K+GKLTG+KHVQLS C+LDD GL +AC++VAT+ GIQTLD+SSN+LS   A  LAKALWRCRSLHEIVLEESV   DA  VS++FKEYMPWATVRVDDR+ R+   RR  A  G      +  A      ++ + GD+N    D       PHHWE +DAESDGE+PPEL+ DD
Sbjct:    1 MSIAEQRSLIRGLSSSGLLPQLEKVTLGDGTTSYVRSPGRGPGRDLFAAFRKTPCVKLRVLWLQRLDLWDDLDALASALGPAHCPVLEELFLDLALDTDDVERLAGCLHKFPKSLKTLGVLAVAIKNRTQDGQFEMADPEPALQRLADALCKHPRPTLQCLDISLHYEPEAEEELPPD--EPPQP----PPFKARAATMPIIRLLKSGKLTGIKHVQLSSCSLDDSGLAIACKAVATMTGIQTLDISSNQLSLTGAKALAKALWRCRSLHEIVLEESVVPDDAAAVSAVFKEYMPWATVRVDDRDGRKNLARRYLAAAGGQGQAHDAVADDQGAFSDEEGGDNNGQEDDVVFDMMGPHHWEAVDAESDGEVPPELVMDD 373          
BLAST of mRNA_F-serratus_M_contig13.2187.1 vs. uniprot
Match: A0A835Z7K9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7K9_9STRA)

HSP 1 Score: 305 bits (782), Expect = 4.440e-89
Identity = 188/509 (36.94%), Postives = 274/509 (53.83%), Query Frame = 0
Query:  214 VFRDIVEASLSVLALSGVKSIT--WATPENLSFLTRFKNVQTLHWYVGVGRPSDLGEENSDAAGAGAAPEASAASXXXXXXXXXXXXXXXAGGKEKLGGVTREKNVLEVADCNPVRAWAYLLGALPKIEEVIIVEGLETDESALEEVWLHLLPLCR-NLRSFFLNFEDYSECPVDG----DHPPINVKKFAVFLQARKPFPKLRELHLELGSMSITEQRSLIIGLGMSGLLPQLEKVTLGDGTTSYVRNPGRGPGRDLLTAFKRSPCARLKVLWLQRLDLWDDLESLASALG-PEYCPVLEELFLDLALDTDDVVRLANCLHKFPRCLKTLGVLAVAIKDRTTEGQFVNHDPTPALQMLADALANHPRPNLQCLDVSLHYEP-PDSADDAQPLVLTAPFEP-----REAVMPIIALFKTGKLTGLKHVQLSGCNLDDKGLLLACQSVATVKGIQTLDLSSNKLSKECAAQLAKALWRC-RSLHEIVLEESVE-EKDAQEVSSLFKEYMP 706
            V +D+ E +   +A+  + ++   W +P  L+ L +F+ V+ LHW VG+    + G E                                  G E+    TR +  L      P+  W YLL  LP + +V I EG  T+E ALEE+W  +LPLC   LR   L+FE Y+   ++G    DHPP+NVK  AV L   +PFP LRELHLEL SMSITEQRSL+ GLG  G+L +LE +T+G GT++Y R P +GPG+DL  A  +     L +LWLQRLD+WDD E +  ALG P  CP L +L+LDL LD +D   LA  LH  P  LKTLG++ + I  R  +G F    P   ++++A A+  HPR +L+C+D+ LHYE  PD  ++ +P+    P  P     R   +P++   +      L H+QL  C L  K       + A +  +QTLD+S N++S+    +L  AL      ++EI+ EE V+ +++A  +++L +   P
Sbjct:  133 VSKDVRERACETMAVMSLNTLKGDWVSPAALASLCKFRRVKALHWCVGMDEEEEEGSE----------------------------------GHER----TRPEEWLG----RPLMVWTYLLARLP-LTDVTITEGPATNEQALEELWERVLPLCAPTLRRLALSFEGYAAREMEGEQDVDHPPVNVKHLAVVLARDRPFPHLRELHLELNSMSITEQRSLVRGLGQGGVLQRLESLTIGGGTSAYAR-PAKGPGKDLAAAITKHGAPNLSLLWLQRLDIWDDFEGVFRALGDPALCPSLRQLYLDLTLDIEDSKALAAALHLCPPSLKTLGMMVMGITARDDQGNFKRCSPEAGVEVIAKAMLAHPRDDLECVDLCLHYEDAPDDNEEPEPIDPAHPPPPPGLSQRRDAVPLLEALRGAAAPRLLHLQLPNCRLTGKAFSEVLSTAAALPRLQTLDISGNEMSEVLVEELVAALTTSVPHVYEIMAEECVKTDEEANTLAALCRARAP 597          
BLAST of mRNA_F-serratus_M_contig13.2187.1 vs. uniprot
Match: A0A835YQN0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQN0_9STRA)

HSP 1 Score: 273 bits (699), Expect = 2.010e-76
Identity = 175/490 (35.71%), Postives = 241/490 (49.18%), Query Frame = 0
Query:  184 DRAWTIALDYLELGEASGRAYGMRCRQLGRVFRDIVEASLSVLALSGVKSITWATPENLSFLTRFKNVQTLHWYVGVGRPSDLGEENSDAAGAGAAPEASAASXXXXXXXXXXXXXXXAGGKEKLGGVTREKNVLEVADCN-----PVRAWAYLLGALPKIEEVIIVEGLETDESALEEVWLHLLPLCR-NLRSFFLNFEDYSECPVDGD--------------------------HPPINVKKFAVFLQARKPFPKLRELHLELGSMSITEQRSLIIGLGMSGLLPQLEKVTLGDGTTSYVRNPGRGPGRDLLTAFKRSPCARLKVLWLQRLDLWDDLESLASALGPE-YCPVLEELFLDLALDTDDVVRLANCLHKFPRCLKTLGVLAVAIKDRTTEGQFVNHDPTPALQMLADALANHPRPNLQCLDVSLHYEPPDSAD------DAQPLVLTAPFEPREAVMPIIALFKTGKLTGLKHVQLSGCNL 634
            D  W +ALD+L+L +       +   +  R        +++VL+L GV+   W  P  L+ +TRF+ V+TLHW VG             A  A   PE                       +   GG  R+               P+  W +LL  LP ++ V I  G+  DE AL E+W  +LP C   LR F L FE Y   P  GD                          +PPINVK+FA+ L  R PFP LRELHLEL SMSI+EQRSL+ G+   GLL +LE +T+G GT+ Y R P  G G++L TA +      L++LWLQR D+WDD   + SAL     CP L+EL++D  LD DD + LA  L   P CLKTLG++ +A+++R   G F    P PA+  +A AL    RP L C+D+ LH+EPP   +      D  P    A   P +A +P++  F+ G +  ++H+QL  C L
Sbjct:  161 DAGWALALDFLDLHDV------VAVTRTARELAHRAHETMTVLSLHGVRG-GWVGPHALAAITRFRRVRTLHWCVG-------------ALPAPPPPETPLVEPEDGEETYESRRHRC---QSSSGGAARDDESRRHCPAQQWYGEPLMVWTFLLARLPLLD-VTITPGVANDEDALGELWERVLPACAPQLRRFALAFEGYQPPPPQGDXXXXXXXXXXXXXXXXXPSDQPPPIDYPPINVKRFALMLATRNPFPALRELHLELSSMSISEQRSLVRGITQGGLLARLECLTMGGGTSVYAR-PKIGAGQELATALREHGAPNLRLLWLQRFDVWDDFPGVFSALSDRTLCPALKELYIDATLDHDDTLALAAALPLVPTCLKTLGMMVMALRERDHLGYFKRVSPVPAVTAIATALLEAQRPQLGCVDLCLHFEPPQEGETDEWYSDELPPPPPADKSPVDASIPLLRAFQAGAVPNMRHLQLPNCRL 625          
BLAST of mRNA_F-serratus_M_contig13.2187.1 vs. uniprot
Match: A0A6H5L111_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L111_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 1.640e-29
Identity = 96/228 (42.11%), Postives = 117/228 (51.32%), Query Frame = 0
Query:    1 MSSRGRPSLSGTPGRSSLGASPSEVDLTQLRTLLQSARDLPCFQQTRPECQGMIDDVLTNCLPMAAMAEASVSTP--RADSAGPSSASGMLRSKFRAHARRLATTSADSTVRQQHFSDMS--------VDGLDTDGIPCRKQLEA--DFSPLGGVPPMPCGKWGSVTGTP-------------TRGSQLTRRMSGSGLTEKIGITRIPDRAWTIALDYLELGEASGRA 203
            MS RGRPSLSGTPGRSSL  S   +DL +LR  L +AR+L CFQ  RP+CQ MIDDVLT+CLP+AAMAE + + P  R  +A   SA+          A  +  T   +                   V  +D D  P  KQ+      S +GG      G+ GS                       L+RR SGS   +++GITRIPDRAWTIALDYLELGE  G A
Sbjct:    1 MSFRGRPSLSGTPGRSSLEPSSDSLDLAKLRADLVAARELTCFQ-ARPDCQSMIDDVLTSCLPLAAMAEFTSAAPAARLGAAAADSAAEXXXXXXPVDASVVPLTRTPAXXXXXXXXXXXXXXXXXXXVSSMDWDPSPTSKQIAMPPSSSSIGGG----AGRGGSXVSRSGXXXXXXXXXXXXXXXGVLSRRASGSIFADRVGITRIPDRAWTIALDYLELGEVGGMA 223          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig13.2187.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FZG4_ECTSI1.970e-18551.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KYL0_9PHAE1.740e-15666.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z7K9_9STRA4.440e-8936.94Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YQN0_9STRA2.010e-7635.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5L111_9PHAE1.640e-2942.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 606..736
e-value: 1.1E-13
score: 53.1
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 348..587
e-value: 2.0E-6
score: 28.7
NoneNo IPR availablePANTHERPTHR24113FAMILY NOT NAMEDcoord: 620..702
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 361..686

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig13contigF-serratus_M_contig13:393269..409658 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig13.2187.1mRNA_F-serratus_M_contig13.2187.1Fucus serratus malemRNAF-serratus_M_contig13 393104..409813 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig13.2187.1 ID=prot_F-serratus_M_contig13.2187.1|Name=mRNA_F-serratus_M_contig13.2187.1|organism=Fucus serratus male|type=polypeptide|length=792bp
MSSRGRPSLSGTPGRSSLGASPSEVDLTQLRTLLQSARDLPCFQQTRPEC
QGMIDDVLTNCLPMAAMAEASVSTPRADSAGPSSASGMLRSKFRAHARRL
ATTSADSTVRQQHFSDMSVDGLDTDGIPCRKQLEADFSPLGGVPPMPCGK
WGSVTGTPTRGSQLTRRMSGSGLTEKIGITRIPDRAWTIALDYLELGEAS
GRAYGMRCRQLGRVFRDIVEASLSVLALSGVKSITWATPENLSFLTRFKN
VQTLHWYVGVGRPSDLGEENSDAAGAGAAPEASAASGGMAGADANGGDGA
AAGGKEKLGGVTREKNVLEVADCNPVRAWAYLLGALPKIEEVIIVEGLET
DESALEEVWLHLLPLCRNLRSFFLNFEDYSECPVDGDHPPINVKKFAVFL
QARKPFPKLRELHLELGSMSITEQRSLIIGLGMSGLLPQLEKVTLGDGTT
SYVRNPGRGPGRDLLTAFKRSPCARLKVLWLQRLDLWDDLESLASALGPE
YCPVLEELFLDLALDTDDVVRLANCLHKFPRCLKTLGVLAVAIKDRTTEG
QFVNHDPTPALQMLADALANHPRPNLQCLDVSLHYEPPDSADDAQPLVLT
APFEPREAVMPIIALFKTGKLTGLKHVQLSGCNLDDKGLLLACQSVATVK
GIQTLDLSSNKLSKECAAQLAKALWRCRSLHEIVLEESVEEKDAQEVSSL
FKEYMPWATVRVDDRESRRTQGRRSTAVHGQVNNEAEEQAGGDDFMAEND
DGDDNSHASDPADPHHWEDIDAESDGELPPELMADDSDLDI*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf