mRNA_F-serratus_M_contig129.2144.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig129.2144.1 vs. uniprot
Match: D8LIV2_ECTSI (Queuosine salvage protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIV2_ECTSI) HSP 1 Score: 437 bits (1125), Expect = 1.720e-147 Identity = 239/370 (64.59%), Postives = 281/370 (75.95%), Query Frame = 1
Query: 112 GGHTGLLGRVVSAATKAAGAQTVARINDASMREFVESGGVPLDKYRRVSSRVPLPLKFDDNGQEINFHSLIALLSFGGANEPRLLALAGSGAEDTVKFGLIGSHLARERLDATWMKNAHVGSVSEAFKIPVREDTDSSIPGVKIDRPGALVSHAQALCSVLNDTGEALLSRGYSDLAQFIMHTSKSDSGAEGLVKSLSGALPAFRDTETVDANVLTSLCFPYATILQVLAGELSARMGSTVEGLRFKDVGELSAVADADVITALIFLRIVEPEKSSCV---------GSEVSNESQEATPAAAASVAAKV---FKPQDTAALRTVAMEACHRLANMLGDEFHPHELSLFLKRLSRRKEYKELPRFIPEWS 1185
GG GLL RVV+ + A Q VARIND +M +F++ GGVPLDKY+R +SRVPLPLKFDD QEINFHSL+ALLSFGG++EP LL L GS +D KFGLIGSHL+RERLDATWMKNAHVGSVSE FKIPVRED S+IPGV +DRPGALVSHAQALCSVLN+TGEALLSRGY+D+AQFI+H+++SD G EGLV+SLSGALP F+DTETV N L L A QVLAGELS+RMG VE LRF D +L+AVADADVITAL L I+EP K++ G+ E T A+S +V FKP+DTA LR VA++ACHR+A LG ++ PHELSL+LKRLSRRKEYK+ PRF+P S
Sbjct: 12 GGKGGLLARVVATSATACEEQQVARINDDAMAKFLDGGGVPLDKYKRAASRVPLPLKFDDAAQEINFHSLLALLSFGGSHEPELLRLTGSNVDDAAKFGLIGSHLSRERLDATWMKNAHVGSVSEGFKIPVREDAPSTIPGVTVDRPGALVSHAQALCSVLNETGEALLSRGYTDMAQFILHSARSDPGVEGLVRSLSGALPGFQDTETV--NGLDVLMLKNA---QVLAGELSSRMGKAVEDLRFDDSDKLTAVADADVITALTTLGILEPAKTATPTGTAETAADGAPREGEEIAETAVGASSADGRVGPAFKPKDTAELRAVAVQACHRMAESLGKDYRPHELSLYLKRLSRRKEYKDAPRFLPRES 376
BLAST of mRNA_F-serratus_M_contig129.2144.1 vs. uniprot
Match: A0A835Z942_9STRA (Queuosine salvage protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z942_9STRA) HSP 1 Score: 222 bits (566), Expect = 4.060e-64 Identity = 145/354 (40.96%), Postives = 203/354 (57.34%), Query Frame = 1
Query: 127 LLGRVVSAATKAAGAQTVARINDASMREFVESGGVPLDKYRRVSSRVPLPLKFDDNGQEINFHSLIALLSFGGANEPRLLALAGSGAEDTVKFGLIGSHLARERLDATWMKNAHVGSVSEAFKIPVRE-DTDSSIPGVKIDRPGALVSHAQALCSVLNDTGEALLSRGYSDLAQFIMHTSKSDSG-AEGLVKSLSGALPAFRDTETVDANVLTSLCFPYATILQVLAGELSARMGSTVEGLRFKDVGELSAVADADVITALIFLRIVEP--EKSSCVGSEVSNESQEATPAAAASVAAKVFKPQDTAALRTVAMEACHRLANMLGDEFHPHELSLFLKRLSRRKEYKELPRFIP 1176
LL R+ + +A AQ I ++ + V V ++R ++ VP PL F G +INFH+ +A+L FGG+ EP L+A + EDT++FGLIG+H++R R DA +M++A +S F IP+RE + SSIPGV ++RPG L L L+ G LLS GY D AQF++ K+ G AE LV +L ALP+ D + +A +++ A Q+LA EL RMG ++ L+ DV +L+AVADAD IT LI L I+ P + ++ GSE PA AA K F DT LR A ACH+LA LGD + P ++L++ LSR YK+LPRFIP
Sbjct: 11 LLSRIRQSTAQAYEAQNRVVIYTKALNDLV----VDAKAFKRYTTPVPYPLSFGTPGDQINFHTGLAMLRFGGSYEPDLVARTRNTLEDTIRFGLIGAHISRSRFDAAFMRDASPNDISSTFNIPMREAEQVSSIPGVMVERPGPLAPLVADLQEALHAVGARLLSLGYQDAAQFVLDALKAGGGSAERLVSALVQALPSAFD-DACEAGGMSAAMHKNA---QLLALELHHRMGKSLPLLQLSDVDKLTAVADADTITGLIQLGILRPAGDAAAAPGSE---------PAVAAEAGLKAFTAADTNVLRVAACVACHKLAERLGDGYAPISVALYINHLSRSASYKDLPRFIP 347
BLAST of mRNA_F-serratus_M_contig129.2144.1 vs. uniprot
Match: A0A433CWU1_9FUNG (Queuosine salvage protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433CWU1_9FUNG) HSP 1 Score: 112 bits (281), Expect = 9.420e-24 Identity = 101/332 (30.42%), Postives = 152/332 (45.78%), Query Frame = 1
Query: 226 GVPLDKYRRVS--SRVPLPLKFDDNGQEINFHSLIALLSFGGANEPRLLALAGSGAEDTVKFGLIGSHLARERLDATWMKNAHVGSVSEAFKIPV-REDTDSSIPGVKIDRPGALVSHAQALCSVLNDTGEALLSRGYSDLAQFIMHTSKSDSG----AEGLVKSLSGALPAFRDTETVDANVLTSLCFPYATILQVLAGELSARMGSTVEGLRFK--DVGELSAVADADVITALIFLRIVEPEKSSCVGSEVSNESQEATPAAAASVAAKVFKPQDTAALRTVAMEACHRLANMLGDE--------FHPHELSLFLKRLSRRKEYKELPRF 1170
G+ D++ +S S V +PLKFD QEINF + + LL+FG L G GA DTV+FG + H+ A+ + V V++ F+IP+ RE +P + + P L A+A+ SVLN+TG+ LL+ GY++++QFI+ +K + G A GLV+ A P FRD VD + F A Q+LA L + T + RF D+ L+ +D + T L L +V S V + D LR A+ AC + E +L ++L RL + Y+E+ RF
Sbjct: 25 GLDKDQFSDLSDDSTVRMPLKFDTTQQEINFIAFVDLLNFGSGYRVPLHEATGRGAFDTVRFGAMSHHIGGLPWTASHFHSTTVFEVAQTFQIPLDREVHPEGMPFLTMSEPHELRKLAEAITSVLNETGQVLLNGGYANMSQFILQATKPEQGRPPSAVGLVEKFVRAFPGFRDMAKVDGQNV--YLFKKA---QILAYHLYI-LFRTQDPARFDFVDIASLTIFSDNVIPTMLAHLGVVRIPDSLARRIAVHED----------------IGTADATRLRAAAIFACEEIVRATRGESGLGPVRDMTEADLDVYLWRLGKVGAYREVTRF 334
BLAST of mRNA_F-serratus_M_contig129.2144.1 vs. uniprot
Match: A0A2D4BR61_PYTIN (Queuosine salvage protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BR61_PYTIN) HSP 1 Score: 105 bits (262), Expect = 3.120e-21 Identity = 80/253 (31.62%), Postives = 124/253 (49.01%), Query Frame = 1
Query: 178 VARINDASMREFVESGGVPLDKYRRVSSRVPLPLKFDDNGQEINFHSLIALLSFGGANEPRLLALAGSGAEDTVKFGLIGSHLARERLDATWMKNAHVGSVSEAFKIPVREDTDSSIPGVKIDRPGALVSHAQALCSVLNDTGEALLSRGYSDLAQFIM----HTSKSDSGAEGLVKSLSGALPAFRDTETVDANVLTSLCFPYATILQVLAGELSARMGSTVEGLRFKDVGELSAVADADVITALIFLRIVE 924
V IN+ +R F++ + +Y +S+ PL F E+NF +L+ALLSFG L GA +T+ FGLIG +++ RLDA +M + +++ F +P+ D + S G+ + +PG L A+ + L + RG+SDL F++ T S A LV+SL PAF D + CF + Q++A L R T E RF+DV E +A++D + L L I+E
Sbjct: 29 VVAINNDKIRAFLDE--LDWSQYEELSAPQRFPLNFRSLQDEVNFMTLLALLSFGSGYRKELHKYTQRGASETILFGLIGMYISVPRLDADYMAXVSIDVLADFFSLPLDRDEEIST-GIYVSKPGPLRPLAEMMHKKLKE-------RGFSDLGAFVLAHLRSTESSSPSAAHLVESLVETFPAFDDHREYRG----ASCF-FLKRAQLVAVSLYRRFQETNEEFRFEDVSEXTALSDNVLPCVLRALGILE 266
BLAST of mRNA_F-serratus_M_contig129.2144.1 vs. uniprot
Match: W7U497_9STRA (Queuosine salvage protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U497_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 5.620e-18 Identity = 87/292 (29.79%), Postives = 131/292 (44.86%), Query Frame = 1
Query: 235 LDKYRRVSSRVPLPLKFDDNGQEINFHSLIALLSFGGANEPRLLALAG---SGAEDTVKFGLIGSHLARERLDATWMKNAHVGSVSEAFKI-PVREDTDSSIPGVKIDRPGALVSHAQALCSVLNDTGEALLSRGYSDLAQFIMHTSKSDS--GAEGLVKSLSGALPAFRDTETVDANVLTSLCFPYATILQVLAGELSARMGSTVEGLRFKDVGELSAVADADVITALIFLRIVEPEKSSCVGSEVSNESQEATPAAAASVAAKVFKPQDTAALRTVAMEACHRLANMLGD 1092
L + R +RV LPLKF E+NFH++++LLSFG A E ++ +G A DTV FGLIG HL++ L A ++ V+ F I P+ S+P ++++RPG L L + +N G L G DLA FI+ + + LV +L A P+ T F +LAGEL R+ + F+D A +IT L+ ++ P + G E ++ AA+VA + P + A L M A LA + +
Sbjct: 49 LSEIRDKVARVGLPLKFPRPLDELNFHAMLSLLSFGKAYEGDFISQSGLLRESARDTVLFGLIGLHLSKTDLRAGFLMTVTRSDVASYFGIEPMENVPHDSMPAIRVERPGPLSRLVDELVTSMNTVGARLKELGEPDLAHFILAAMRGEEVPTVARLVTALDAAFPSTFGAPLPCPGSRTETGFHCRKKSLMLAGELYHRLRHSFAEFDFQDFSRAPGYATPALITFLVSRGVLCPMEDDG-GDEQAH---------AAAVARLLENPDNVAPLTAGTMVAMDELAVRMAE 330
BLAST of mRNA_F-serratus_M_contig129.2144.1 vs. uniprot
Match: A0A1X2IB37_9FUNG (Queuosine salvage protein n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IB37_9FUNG) HSP 1 Score: 95.5 bits (236), Expect = 1.020e-17 Identity = 72/255 (28.24%), Postives = 124/255 (48.63%), Query Frame = 1
Query: 184 RINDASMREFVESGGVPLDKYRRVSSRVPLPLKFDDNGQEINFHSLIALLSFGGANEPRLLALAGSGAEDTVKFGLIGSHLARERLDATWMKNAHVGSVSEAFKIPVREDTD--SSIPGVKIDRPGALVSHAQALCSVLNDTGEALLSRGYSDLAQFIMHTSKSDSGAEG------LVKSLSGALPAFRDTE-TVDANVLTSLCFPYATILQVLAGELSARMGSTVEGLRFKDVGELSAVADADVITALIFLRIV 921
++++ +++F+ P + + + + +PLKF +E+NF ++I LL+FG L LAG GA D ++FG++ H+ + A K + V+ F++P+ ++ +P + ++ A+ AQ + VLN TG L+ GY DLA FIM +++ A G LV+ L ALP +D T D + T F A IL L G + D+ +L+ +D + T LI L ++
Sbjct: 26 KVSEQGVKDFLTKLEKPSYEELAIDTPIRMPLKFSTLAEEVNFVAVIDLLNFGSGYRVPLHELAGRGAFDVIRFGVMSFHVGGTPMTAEKFKTIDIFDVASIFQLPIEKEVPVKEDMPFMTTNQATAVKPFAQGIVDVLNSTGNFLVDHGYKDLAAFIMDITQTQITASGSPTASHLVEKLVRALPGLQDLSVTPDGD--TVYLFKKAQILVYHLWFLFHDQDPDHFG--YTDIDQLTIFSDNVIPTMLIHLGVL 276
BLAST of mRNA_F-serratus_M_contig129.2144.1 vs. uniprot
Match: A0A168PV01_ABSGL (Queuosine salvage protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168PV01_ABSGL) HSP 1 Score: 88.6 bits (218), Expect = 1.740e-15 Identity = 87/339 (25.66%), Postives = 148/339 (43.66%), Query Frame = 1
Query: 187 INDASMREFVESGGVPLDKYRRVSSRVPLPLKFDDNGQEINFHSLIALLSFGGANEPRLLALAGSGAEDTVKFGLIGSHLARERLDATWMKNAHVGSVSEAFKIPVREDTDSSIPG--VKIDRPGALVSHAQALCSVLNDTGEALLSRGYSDLAQFIMHTSKSDSG---AEGLVKSLSGALPAFRDTETVDANVLTSLCFPYATILQVLAGELSARMGSTVEGLRFKDVGELSAVADADVITALIFLRIVE-PEKSSCVGSEVSNESQEATPAAAASVAAKVFKPQDTAALRTVAMEACHRLANM----LGDEFHPHE--LSLFLKRLSRRKEYKELPR 1167
+++ M++F+ P+ + + + + +PLKFD E+NF ++I LL+FG L LAG GA D ++FG++ H+ + A ++ + V+ + + P L AQ + VLN TG L GY+DLA FI+ S S G A +V L ALP +D T F A I+ L G F+D+ +L+ AD + T LI L ++E P++ + + +E K + LR ++ AC ++ + +G H E L ++L R+ + +Y+++PR
Sbjct: 13 VSEQGMQDFLTKLEKPVYEELAIDTPIRMPLKFDTLTAEVNFIAVIDLLNFGSGYRVPLHDLAGRGAFDVIRFGVMSFHVGGTPMTAEKFQSIDIFEVASXXXXXXXXXXXXXXXXXFLTMAEPTPLKPFAQGIVDVLNSTGVFLQQHGYNDLAAFILDISSSSHGKPSAVEMVTRLVQALPGLQDVSTTTQGGEPLYLFKKAQIMVYHLWLLLHEQDPAHFG--FEDIDQLTIFADNVIPTMLIHLGVLEIPQEWQDLLDRHQDVGEE-----------KAY------VLRAASVVACEKIVALSNAGVGSIHHMTEGALDVYLWRVGKVGDYRKVPR 332
BLAST of mRNA_F-serratus_M_contig129.2144.1 vs. uniprot
Match: L1ID34_GUITC (Queuosine salvage protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1ID34_GUITC) HSP 1 Score: 83.6 bits (205), Expect = 1.670e-13 Identity = 79/289 (27.34%), Postives = 128/289 (44.29%), Query Frame = 1
Query: 262 RVPLPLKFDDNGQEINFHSLIALLSFGGANEPRLLALA---GSGAEDTVKFGLIGSHLARERLDATWMKNAHVGSVSEAFKIPVREDTDSSIPGVKIDRPGALVSHAQALCSVLNDTGEALLSRGYSDLAQFIM------HTSKSDS----GAEGLVKSLSGALPAFRDTETVDANVLTSLCFPYATILQVLAGELSARMGSTVEGLRFKDVGELSAVADADVITALIFLRIVEPEKSSCVGSEVSNESQEATPAAAASVAAKVFKPQDTAALRTVAMEACHRLANMLG 1089
R LPL FDD QEINF++L+A LSFG + + + A G D+V LI H+ + LDA + + ++S+A IP+ ++ ++ D P SVL+ L SRG+ DLA FI+ H +S A LV+ L F+D V + + P Q++ +L AR + L F D+ +L+ +DA+ +T L L ++E + + E + + ++ AALR ++AC +LA +
Sbjct: 89 RFGLPLVFDDVKQEINFYALLATLSFGSGWQEGVWSKAPTKGVPTRDSVLNMLISLHMDSKNLDAAGLAEVSLFALSQALDIPLTKEKRLDGGPIRQDVPSDYRWLVDKYYSVLSSLSSDLTSRGFKDLADFILSSRMHGHVRVDESDVNFSASLLVERLVKCFETFQDVANVGQSSV-----PLHRKAQLVCEDLVARFAAREHRLNFTDMEDLTLGSDAETVTWLRKLSLIEVSPALAKKIDSDKEIEAGS--------------REEAALRVAGVKACMKLAEEIN 358
BLAST of mRNA_F-serratus_M_contig129.2144.1 vs. uniprot
Match: A0A0C3AX27_9AGAM (Queuosine salvage protein n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AX27_9AGAM) HSP 1 Score: 76.6 bits (187), Expect = 2.660e-11 Identity = 62/235 (26.38%), Postives = 111/235 (47.23%), Query Frame = 1
Query: 265 VPLPLKFDDNGQEINFHSLIALLSFGGANEPRLLALAGSGAEDTVKFGLIGSHLA----RERLDATWMKNAHVGSVSEAFKIPVR---EDTDSSIPGVKIDRPGA-LVSHAQALCSVLNDTGEALLSRGYSDLAQFIMHTSKSDSGAEG-------LVKSLSGALPAFRDTETVDANVLTSLCFPYATILQVLAGELSARMGSTVEGLRFKDVGELSAVADADVITALIFLRIVE 924
V +PL+F EIN S++++L+F + L G GA DT++ + G +L+ + L A +KN G V+E ++ E +IPG+ I + G L + +VLN+TG L++RGY +L +F++H K +EG ++ + A PAFRD + + F + +L +L + +T + D +L +D + + L+ I++
Sbjct: 63 VAMPLQFPTVASEINVISVLSILNFAHSYRVPLKKATGRGAYDTMRALIFGLYLSSNDEEDLLSAKGLKNLTSGRVAELMQLSGHLHIEQAHPTIPGLTIGQLGGPLYELVTEVTNVLNETGAILVTRGYPNLGEFVLHALKMGQTSEGGPVDPEVVLDEVIRAFPAFRDVGVYNGKEV----FVFKKVLFMLHALVMRFGNATPPKIPLPDTSQLPIFSDNVIPSMLVHFGILD 293
BLAST of mRNA_F-serratus_M_contig129.2144.1 vs. uniprot
Match: I2CQ69_NANGC (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQ69_NANGC) HSP 1 Score: 59.3 bits (142), Expect = 4.100e-7 Identity = 35/77 (45.45%), Postives = 48/77 (62.34%), Query Frame = 1
Query: 235 LDKYRRVSSRVPLPLKFDDNGQEINFHSLIALLSFGGANEPRLLALAG---SGAEDTVKFGLIGSHLARERLDATWM 456
L + R +RV LPLKF E+NFH+L++LLSFG A E ++ +G A DTV FGLIG HL++ L A ++
Sbjct: 49 LSEIRDKVARVGLPLKFPRPLDELNFHALLSLLSFGRAYEGDFISQSGLLRESARDTVLFGLIGLHLSKTDLRAGFL 125 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig129.2144.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig129.2144.1 >prot_F-serratus_M_contig129.2144.1 ID=prot_F-serratus_M_contig129.2144.1|Name=mRNA_F-serratus_M_contig129.2144.1|organism=Fucus serratus male|type=polypeptide|length=377bp MAEKAIQAGGEQKGEGGHTGLLGRVVSAATKAAGAQTVARINDASMREFVback to top mRNA from alignment at F-serratus_M_contig129:766658..779029+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig129.2144.1 ID=mRNA_F-serratus_M_contig129.2144.1|Name=mRNA_F-serratus_M_contig129.2144.1|organism=Fucus serratus male|type=mRNA|length=12372bp|location=Sequence derived from alignment at F-serratus_M_contig129:766658..779029+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig129:766658..779029+ >mRNA_F-serratus_M_contig129.2144.1 ID=mRNA_F-serratus_M_contig129.2144.1|Name=mRNA_F-serratus_M_contig129.2144.1|organism=Fucus serratus male|type=CDS|length=2262bp|location=Sequence derived from alignment at F-serratus_M_contig129:766658..779029+ (Fucus serratus male)back to top |