prot_F-serratus_M_contig1288.2125.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1288.2125.1
Unique Name	prot_F-serratus_M_contig1288.2125.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	255

Homology

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BLAST of mRNA_F-serratus_M_contig1288.2125.1 vs. uniprot
Match: A0A6H5K9B1_9PHAE (Peptidase S59 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9B1_9PHAE)

HSP 1 Score: 258 bits (658), Expect = 5.270e-75
Identity = 152/256 (59.38%), Postives = 172/256 (67.19%), Query Frame = 0

Query:    8 PRWELPRRRNDKPDNYADLVKCMHGYAAAHAAAGAQCLHSSGGPYRGGGSSAGSGGNSSEDGPEWVLEQAWRLASAMWGQEEGEGKVQDLPVPGDVLTAASGFGSVGENDEASPAARREAAVAEWLANAVASCVPTGEWSAAAASAEAS------EEGRGTWRRVLELLSVRRVENAAEVAMDAGLPRLAVVLAA-ATQGIG--RPVRNGASRFLAQQVTLWQGNGADAFMPQEAFVVYQLLGREGFRDVGLRGVI 254
            PRW LPRRRND+P NY  LV+C+HGY   H  AGA              SS+   G ++ED PEWVLEQ+WRLASAMWGQEEGEG+VQDLP+PGD+  AA      G+ D  SPAARREAAV +WLA AV+SCVP+     +             +  R TWRRVLELLSVRRV +AA  AM AGLPRLAV+L A ATQG G  RP     S+FLAQQ   WQ  GADA MPQEAF V QLLGREGFRDVGLRG+I
Sbjct: 1517 PRWALPRRRNDRPQNYDTLVRCIHGYVEVHRLAGAAAT-----------SSSREAGAATEDSPEWVLEQSWRLASAMWGQEEGEGRVQDLPLPGDLQRAAD-LTLAGDCDGGSPAARREAAVGDWLARAVSSCVPSPSGGPSXXXXXXXXXXXXXDADRETWRRVLELLSVRRVHDAAVAAMAAGLPRLAVMLTAVATQGGGGGRPPARYGSKFLAQQAAQWQAAGADARMPQEAFSVVQLLGREGFRDVGLRGLI 1760

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1288.2125.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1288.2125.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5K9B1_9PHAE	5.270e-75	59.38	Peptidase S59 domain-containing protein n=2 Tax=Ec...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021967	Nuclear protein 96	PFAM	PF12110	Nup96	coord: 165..241 e-value: 2.2E-14 score: 53.3

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1288	contig	F-serratus_M_contig1288:1490..2254 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1288.2125.1	mRNA_F-serratus_M_contig1288.2125.1	Fucus serratus male	mRNA	F-serratus_M_contig1288 1490..2256 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1288.2125.1 ID=prot_F-serratus_M_contig1288.2125.1|Name=mRNA_F-serratus_M_contig1288.2125.1|organism=Fucus serratus male|type=polypeptide|length=255bp
RLDGCNVPRWELPRRRNDKPDNYADLVKCMHGYAAAHAAAGAQCLHSSGG
PYRGGGSSAGSGGNSSEDGPEWVLEQAWRLASAMWGQEEGEGKVQDLPVP
GDVLTAASGFGSVGENDEASPAARREAAVAEWLANAVASCVPTGEWSAAA
ASAEASEEGRGTWRRVLELLSVRRVENAAEVAMDAGLPRLAVVLAAATQG
IGRPVRNGASRFLAQQVTLWQGNGADAFMPQEAFVVYQLLGREGFRDVGL
RGVIG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR021967	Nup96