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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 62.4 |
Seed ortholog evalue | 8.9e-08 |
Seed eggNOG ortholog | 2880.D8LDM4 |
Hectar predicted targeting category | other localisation |
GOs | GO:0005575,GO:0005576,GO:0005615,GO:0044421 |
EggNOG free text desc. | phospholipase A1 activity |
EggNOG OGs | KOG4569@1,KOG4569@2759 |
COG Functional cat. | G |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
Exons | 2 |
Model size | 348 |
Cds size | 192 |
Stop | 1 |
Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622932794.4490304-CDS-F-serratus_M_contig997:30279..30471 | 1622932794.4490304-CDS-F-serratus_M_contig997:30279..30471 | Fucus serratus male | CDS | F-serratus_M_contig997 30280..30471 - |
1690964478.963087-CDS-F-serratus_M_contig997:30279..30471 | 1690964478.963087-CDS-F-serratus_M_contig997:30279..30471 | Fucus serratus male | CDS | F-serratus_M_contig997 30280..30471 - |
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622932794.4718468-UTR-F-serratus_M_contig997:32157..32313 | 1622932794.4718468-UTR-F-serratus_M_contig997:32157..32313 | Fucus serratus male | UTR | F-serratus_M_contig997 32158..32313 - |
1690964478.976194-UTR-F-serratus_M_contig997:32157..32313 | 1690964478.976194-UTR-F-serratus_M_contig997:32157..32313 | Fucus serratus male | UTR | F-serratus_M_contig997 32158..32313 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig997.21249.1 >prot_F-serratus_M_contig997.21249.1 ID=prot_F-serratus_M_contig997.21249.1|Name=mRNA_F-serratus_M_contig997.21249.1|organism=Fucus serratus male|type=polypeptide|length=64bp
MDKDLKLDLEANAFSTENALYFARLSEIAYKSEDEAKAIIQGDGDTKHGV MGFDCFHWFEVCI* back to topmRNA from alignment at F-serratus_M_contig997:30280..32313- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig997.21249.1 ID=mRNA_F-serratus_M_contig997.21249.1|Name=mRNA_F-serratus_M_contig997.21249.1|organism=Fucus serratus male|type=mRNA|length=2034bp|location=Sequence derived from alignment at F-serratus_M_contig997:30280..32313- (Fucus serratus male) TGGAGGAGACAGAGACATCAAGGCAACGGCGAATCGGTATTTTGAGGCAC
TAACAGCGACCGGCGGCCACTTCTTGACGCAGCTCACACTTGAGCCTATA
GAAAGAAGGGATTTTTTATTGGCGTCCAGTCGCAGAAGGAGAGCAAATCA
ATCAAGGTAAGCCCTGTTGCCCCTCTGGCCTATTTCATACAGACGGAGCA
TCGGAGGTTGACGTTCTTAAGGTGGCCCGAGAAACGGCTGTGTTGTTTGG
TGTTCCACCTACTAACACAATCACCCGCGATTTTTTGCGTAGTTATCTAG
CCTTTTATGCTGCTTGCACACAAATCGTGCGTCGATTTACCTTCTGATGA
TTGCGAAACCGTCATTTATCTCTGATTTCTCCTTCGGTCGTGTCATATCA
CCATATAATATGCTCCGTACAATGCCGGGCAGTCATTGTCTACTTAGTAC
TCACTGCGGTATATATTATATTCTAAATGTTTAGGCTCTTCTAATACTGG
GTGTGTTTTATATTGTACACATACTTCTACTTTTTACACTTTTACACTAC
TGTTAGTATGCCCTCGTCGCCCGACCGAGTGGTATAGTAGGTAACCTGCA
CACCTGCTAGTCGTGCGGAAGACGTGAGTTCGATTCTCGTCAATCAAAAT
TTGTCTCATTTCTGCTGTGTGTAGCGAAAAGCGTGAGAACATGATTATTA
CGTAAAATTCGACCATACATTGTGATTGGTTGACGAGTTCTAAGGGTGCC
GAACTTGTGTCGCGATAGAAACTCTTAAAGTGTAAGCCGGGGAGAGATGG
GAAGATCCTTAGTGACCACAGGCAGGATGGTAACGTTGTGGCCCATCGGC
TATAAGTGAGATTACAATAATTAAATAAATAAAATAGTAGTAGCACTGCA
CCGACAATGCTCAACCGATATGAGATCACAACAGAAACATGCTGGGCATG
GCATGAAAGAAACATAATCGAAACAACCTAATCCAACAACAACAAAAGTC
CATCCATCTCGACAGCCAATCGAGCGTTGAAGCAGAACAAAACGTCTTAG
ATATTATATAGTAGGTCAAGGTTTACTACTAGGGGGAACTTGGGACGATT
GTCAGGTAACCACCATGCCACGACGAATTTCAGTAAAAGGAAAATACAAA
AAATATGTATACTACTGTAAACCATTTTGACTTAGATACAGAAGTTAGGT
ACCGGTATAAATTGGGAGACACGGACATAAATATTTCTTGTAACATGCCG
GTACGCAGTACATTTAAAGGACACGTACTACAGTAGTACCAGCCCGCTCG
TAAAAATGTACTGGTATGTGATAAGAAAGTGAGGCTCAACTTGCTTGGTC
CCATAAAAATATGAGCTCATTCCCTGCATACACCTCATTTGTATGTTCGA
ATTTATTATGGCATGCACCTCACGCTGTCGCCCTGGATAAGGTTTGGAGC
CTCTGCCCAAAATAATAGGGTTTCTTTTATAAGCGGGCCGGTACTGTACT
GAGTACTGTATGTTGTACATAATATAGCAAGTTAAATACAGAAGACACCA
ATCCCGGAAGCATGCCCTGTGCACTTGGCAGATTGAAGGGGCCGTGAGCG
CGTACTAATTTAAATGGACGTTAGCTTCGCCACTCCTTCTTGAAGTCGTG
TTTTGATCCACGTTAATAAAGTGAGATAATAGTGTTATGTAGGATACTTG
TTTTGTTGCGGTAAACCGCTACAATACTGAGCTCGCCTCGCTCCCGTAAA
CTCGGGCCTCGGGATGGTTCGTACAGTACGTACTGCTGATGAAGGAAACA
ATTTACTGTTGCTCGTCTTTTCTTGTGGCGGCTCACTCTCAGATGGACAA
GGACCTGAAGCTCGATCTCGAGGCCAATGCCTTCTCGACAGAAAACGCCC
TGTACTTTGCTCGATTGAGCGAAATTGCATACAAGTCGGAGGATGAGGCA
AAAGCAATCATCCAGGGAGACGGCGACACCAAGCATGGAGTAATGGGCTT
CGATTGCTTCCATTGGTTCGAGGTGTGCATATGA back to topCoding sequence (CDS) from alignment at F-serratus_M_contig997:30280..32313- >mRNA_F-serratus_M_contig997.21249.1 ID=mRNA_F-serratus_M_contig997.21249.1|Name=mRNA_F-serratus_M_contig997.21249.1|organism=Fucus serratus male|type=CDS|length=384bp|location=Sequence derived from alignment at F-serratus_M_contig997:30280..32313- (Fucus serratus male) ATGGACAAGGACCTGAAGCTCGATCTCGAGGCCAATGCCTTCTCGACAGA AAACGCCCTGTACTTTGCTCGATTGAGCGAAATTGCATACAAGTCGGAGG ATGAGGCAAAAGCAATCATCCAGGGAGACGGCGACACCAAGCATGGAGTA ATGGGCTTCGATTGCTTCCATTGGTTCGAGGTGTGCATATGAATGGACAA GGACCTGAAGCTCGATCTCGAGGCCAATGCCTTCTCGACAGAAAACGCCC TGTACTTTGCTCGATTGAGCGAAATTGCATACAAGTCGGAGGATGAGGCA AAAGCAATCATCCAGGGAGACGGCGACACCAAGCATGGAGTAATGGGCTT CGATTGCTTCCATTGGTTCGAGGTGTGCATATGA back to top
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