prot_F-serratus_M_contig1288.2131.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1288.2131.1
Unique Nameprot_F-serratus_M_contig1288.2131.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length318
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1288.2131.1 vs. uniprot
Match: A0A6H5JNQ0_9PHAE (KIX_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNQ0_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 4.620e-47
Identity = 95/110 (86.36%), Postives = 98/110 (89.09%), Query Frame = 0 
Query:   88 EDRAKQERSLRAEELRNIYQEDIRYFVLHGSSLLKKLHKTRQASHNSEQVPKLEQYVKEGHNALLYINRCHDTDHVPSAASLHSLEHTLIRVHKASNVLQVMIRDHSRTQ 197
            E+RAKQ RS RAEELR IYQEDI YFV HGSSLLKKLHKTR AS NSEQV KL QYVKEGHNALLYINRCH+T HVPSAASL SLEHTLIRVHKASN LQVMIRDHS+TQ
Sbjct:  315 EERAKQHRSRRAEELRTIYQEDIHYFVQHGSSLLKKLHKTRPASQNSEQVLKLVQYVKEGHNALLYINRCHETGHVPSAASLQSLEHTLIRVHKASNALQVMIRDHSKTQ 424
[Close]
BLAST of mRNA_F-serratus_M_contig1288.2131.1 vs. uniprot
Match: A0A835Z449_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z449_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.650e-13
Identity = 50/97 (51.55%), Postives = 64/97 (65.98%), Query Frame = 0 
Query:   99 AEELRNIYQEDIRYFVLHGSSLLKKLHKTRQ--ASHNS---EQVPKLEQYVKEGHNALLYINRCHDTDHVPSAASLHSLEHTLIRVHKASNVLQVMI 190
            AE+LR  Y+ DIR FV  G S+L K   + +  A+H S   +Q+ KL QYV+EG NAL+Y+ RCH   HVPSA SL SLE TL +VH AS  L+ M+
Sbjct:  447 AEQLRRRYEADIRAFVQQGRSVLLKHDGSPRSMAAHGSGGADQIRKLRQYVREGQNALVYMERCHSRGHVPSAVSLQSLEQTLAKVHCASRTLRQMM 543
[Close]
BLAST of mRNA_F-serratus_M_contig1288.2131.1 vs. uniprot
Match: A0A836CHY1_9STRA (KIX_2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHY1_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 4.650e-6
Identity = 30/53 (56.60%), Postives = 37/53 (69.81%), Query Frame = 0 
Query:  137 VPKLEQYVKEGHNALLYINRCHDTDHVPSAASLHSLEHTLIRVHKASNVLQVM 189
            V KL QY++EG NAL+Y+ RCH   H+PS  SL SL  TL +VHKAS  L+ M
Sbjct:   71 VRKLVQYIREGQNALMYMERCHLQHHIPSGPSLESLHLTLQKVHKASLALRSM 123
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1288.2131.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JNQ0_9PHAE4.620e-4786.36KIX_2 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835Z449_9STRA1.650e-1351.55Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CHY1_9STRA4.650e-656.60KIX_2 domain-containing protein n=1 Tax=Tribonema ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1288contigF-serratus_M_contig1288:110928..114150 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1288.2131.1mRNA_F-serratus_M_contig1288.2131.1Fucus serratus malemRNAF-serratus_M_contig1288 110928..114150 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1288.2131.1 ID=prot_F-serratus_M_contig1288.2131.1|Name=mRNA_F-serratus_M_contig1288.2131.1|organism=Fucus serratus male|type=polypeptide|length=318bp
VSPTLSLLQQQGSGVVSPVNSLPTSLDPHDSFLGLEPIPLPDNTAFGSPT
PTPAQKQQKHKQRQQQVLLRRHQTGHGSGSAQSQIDVEDRAKQERSLRAE
ELRNIYQEDIRYFVLHGSSLLKKLHKTRQASHNSEQVPKLEQYVKEGHNA
LLYINRCHDTDHVPSAASLHSLEHTLIRVHKASNVLQVMIRDHSRTQQND
IPYGPGGGGGGADGSGGAGGSGGGGAAQRSCNRSHPSRQHPNRDFPTVLR
RPRVRPGPFDQSDPEPSPAAGKRGRESGNPLPTSLDPRDSILDLEPIPLR
DNAAFGSPTPTPPQEQQQ
back to top