mRNA_F-serratus_M_contig990.21207.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig990.21207.1 vs. uniprot
Match: D8LQT2_ECTSI (Robl_LC7 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQT2_ECTSI) HSP 1 Score: 183 bits (465), Expect = 9.770e-54 Identity = 90/102 (88.24%), Postives = 98/102 (96.08%), Query Frame = 1 Query: 1 SQHVNEVEEVIKDLKTNPGFSAYVIMNNDGIVIKYESMEYRTAVHHAALILDLASKSKKFMRELFEPPDNEVESLRLRTREHEMIIALHDNFTLAVIQQDPS 306 SQ VNEVEEVIK+LKTNPGFSAYVIMNNDGIVIKYESMEYR AVHHAAL+LDLASKSKK+MRELFEPPDN+VESLRLRT EHEMIIALH++FTL V+QQDP+ Sbjct: 3 SQQVNEVEEVIKELKTNPGFSAYVIMNNDGIVIKYESMEYRAAVHHAALVLDLASKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHESFTLVVVQQDPN 104
BLAST of mRNA_F-serratus_M_contig990.21207.1 vs. uniprot
Match: A0A835ZE71_9STRA (Robl_LC7 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE71_9STRA) HSP 1 Score: 170 bits (430), Expect = 1.720e-48 Identity = 81/100 (81.00%), Postives = 91/100 (91.00%), Query Frame = 1 Query: 13 NEVEEVIKDLKTNPGFSAYVIMNNDGIVIKYESMEYRTAVHHAALILDLASKSKKFMRELFEPPDNEVESLRLRTREHEMIIALHDNFTLAVIQQDPSAK 312 NEVEEVIK+LK NPGFSAYV+MNNDGIVIKYESM Y+TAVHHAAL+LDL +K KK+MRE+FEPPDNEVESLRLRT EHEMI+A H+NFTL VIQ+DP K Sbjct: 12 NEVEEVIKELKKNPGFSAYVVMNNDGIVIKYESMSYQTAVHHAALVLDLVAKGKKYMREMFEPPDNEVESLRLRTEEHEMIVAQHENFTLVVIQEDPKWK 111
BLAST of mRNA_F-serratus_M_contig990.21207.1 vs. uniprot
Match: A0A7S2XUU9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUU9_9STRA) HSP 1 Score: 159 bits (403), Expect = 1.460e-44 Identity = 78/103 (75.73%), Postives = 90/103 (87.38%), Query Frame = 1 Query: 1 SQHVNEVEEVIKDLKTNPGFSAYVIMNNDGIVIKYESMEYRTAVHHAALILDLASKSKKFMRELFEPPDNEVESLRLRTREHEMIIALHDNFTLAVIQQDPSA 309 SQ NEVEEVI++LK NPGF AYVIMNNDGIVIKYE+MEY+TAVHHA L+LDL +KSKK++RELFEPPDNEVESLRLRT ++EMIIA H NFTL V+Q+ A Sbjct: 3 SQQPNEVEEVIRELKKNPGFDAYVIMNNDGIVIKYENMEYKTAVHHAHLVLDLCTKSKKYIRELFEPPDNEVESLRLRTADYEMIIAQHGNFTLTVLQKSQKA 105
BLAST of mRNA_F-serratus_M_contig990.21207.1 vs. uniprot
Match: A0A6V1PEV3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PEV3_HETAK) HSP 1 Score: 152 bits (384), Expect = 9.800e-42 Identity = 74/103 (71.84%), Postives = 88/103 (85.44%), Query Frame = 1 Query: 1 SQHVNEVEEVIKDLKTNPGFSAYVIMNNDGIVIKYESMEYRTAVHHAALILDLASKSKKFMRELFEPPDNEVESLRLRTREHEMIIALHDNFTLAVIQQDPSA 309 SQ NEVEEVIK+LK NPGF YV+MNNDGIVIK E+MEY+TAVHHA L+LDL +KS+K+MR+L +PPDNEVES+RLRT ++EMIIA HDNFTL VIQ+ A Sbjct: 3 SQQPNEVEEVIKELKQNPGFDGYVVMNNDGIVIKCENMEYKTAVHHAHLVLDLCAKSRKYMRDLLDPPDNEVESIRLRTIDYEMIIAQHDNFTLVVIQKSHRA 105
BLAST of mRNA_F-serratus_M_contig990.21207.1 vs. uniprot
Match: A0A7S1XSZ1_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSZ1_9STRA) HSP 1 Score: 130 bits (327), Expect = 2.290e-33 Identity = 64/98 (65.31%), Postives = 82/98 (83.67%), Query Frame = 1 Query: 1 SQHVNEVEEVIKDLKTNPGFSAYVIMNNDGIVIKYESMEYRTAVHHAALILDLASKSKKFMRELFEPPDNEVESLRLRTREHEMIIALHDNFTLAVIQ 294 SQ VNE EEVIK+LK PGF +Y+I+NNDGIVIK+E+M+YR+A+ A L+LDL +KSKK++RELFE PDNEVESLRLR++ E+I+A H +FTL V Q Sbjct: 3 SQQVNEAEEVIKELKMVPGFHSYMILNNDGIVIKWENMQYRSAIQCAHLVLDLVAKSKKYIRELFEVPDNEVESLRLRSKNFELIVAQHGSFTLVVKQ 100
BLAST of mRNA_F-serratus_M_contig990.21207.1 vs. uniprot
Match: A0A7S2SQX1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQX1_9STRA) HSP 1 Score: 123 bits (308), Expect = 1.380e-30 Identity = 59/98 (60.20%), Postives = 80/98 (81.63%), Query Frame = 1 Query: 1 SQHVNEVEEVIKDLKTNPGFSAYVIMNNDGIVIKYESMEYRTAVHHAALILDLASKSKKFMRELFEPPDNEVESLRLRTREHEMIIALHDNFTLAVIQ 294 S NEV+EVI++LK N GF +YVI+ NDGIVIKYE+M+ + AV A L+LDL +KSKK+++ELFEPPDN+VESLRL+T E EMI+A + +++L V+Q Sbjct: 3 SNQTNEVDEVIRELKQNQGFKSYVIIRNDGIVIKYENMDVQKAVQTAHLVLDLCAKSKKYIKELFEPPDNDVESLRLKTLEFEMIVAQYGDYSLVVVQ 100
BLAST of mRNA_F-serratus_M_contig990.21207.1 vs. uniprot
Match: W7TDN2_9STRA (Dynein light chain n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TDN2_9STRA) HSP 1 Score: 121 bits (303), Expect = 8.810e-30 Identity = 57/98 (58.16%), Postives = 81/98 (82.65%), Query Frame = 1 Query: 1 SQHVNEVEEVIKDLKTNPGFSAYVIMNNDGIVIKYESMEYRTAVHHAALILDLASKSKKFMRELFEPPDNEVESLRLRTREHEMIIALHDNFTLAVIQ 294 +Q ++EV+ +++DLK PGFS+Y+IMNNDGIVIKYE++EY+ AV A L+LDLASK+K+ R L E P+NEVES+RL++R++E+I+ NFTLAV+Q Sbjct: 8 TQAMSEVDVILRDLKAQPGFSSYMIMNNDGIVIKYENIEYKRAVQIAHLVLDLASKAKRAARNLLESPENEVESIRLKSRDYELIVGQSGNFTLAVVQ 105
BLAST of mRNA_F-serratus_M_contig990.21207.1 vs. uniprot
Match: A0A7S2C4Y6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C4Y6_9STRA) HSP 1 Score: 119 bits (298), Expect = 3.910e-29 Identity = 59/94 (62.77%), Postives = 73/94 (77.66%), Query Frame = 1 Query: 13 NEVEEVIKDLKTNPGFSAYVIMNNDGIVIKYESMEYRTAVHHAALILDLASKSKKFMRELFEPPDNEVESLRLRTREHEMIIALHDNFTLAVIQ 294 N+V+EVI DLK+N G YVI+NNDGIVIKYE M+Y AV HA L+LDL +KSK + R +FE P+NEVES+RL+T E EMII+ NFTL +IQ Sbjct: 7 NQVDEVIHDLKSNVGAKQYVILNNDGIVIKYEGMDYSRAVQHAYLVLDLCAKSKSYFRGMFEAPENEVESIRLKTNEFEMIISQIQNFTLVMIQ 100
BLAST of mRNA_F-serratus_M_contig990.21207.1 vs. uniprot
Match: A0A6S8XD14_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8XD14_9STRA) HSP 1 Score: 118 bits (295), Expect = 1.130e-28 Identity = 58/104 (55.77%), Postives = 81/104 (77.88%), Query Frame = 1 Query: 1 SQHVNEVEEVIKDLKTNPGFSAYVIMNNDGIVIKYES----MEYRTAVHHAALILDLASKSKKFMRELFEPPDNEVESLRLRTREHEMIIALHDNFTLAVIQQD 300 SQ +NEVEE++K+L+ NPGF AY+I+NNDGIVIK++ M Y+ AV ++ +LDL +KSK +++LFEP DN+VE++RLRT E+E+I A NFTL VIQ+D Sbjct: 3 SQQINEVEEMLKELRKNPGFKAYLILNNDGIVIKWDQEGSPMPYQKAVQYSHHVLDLCNKSKAHIKDLFEPQDNQVENIRLRTDEYELIAAQQANFTLVVIQED 106
BLAST of mRNA_F-serratus_M_contig990.21207.1 vs. uniprot
Match: H3H541_PHYRM (Robl_LC7 domain-containing protein n=19 Tax=Phytophthora TaxID=4783 RepID=H3H541_PHYRM) HSP 1 Score: 118 bits (296), Expect = 1.150e-28 Identity = 57/96 (59.38%), Postives = 78/96 (81.25%), Query Frame = 1 Query: 13 NEVEEVIKDLKTNPGFSAYVIMNNDGIVIKYESMEYRTAVHHAALILDLASKSKKFMRELF-EPPDNEVESLRLRTREHEMIIALHDNFTLAVIQQ 297 NE+EEVIK LK+ PGFS+Y++MNNDGIV+KYE++EY+ A+ HA +L L ++KK +++LF +P D+E+E LRLRT+ HEMIIA H FTL V+QQ Sbjct: 7 NEIEEVIKQLKSKPGFSSYILMNNDGIVVKYENVEYKEAIMHAYHVLSLYGRTKKHLQKLFPDPSDSEIEWLRLRTKMHEMIIAQHLRFTLVVLQQ 102 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig990.21207.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig990.21207.1 >prot_F-serratus_M_contig990.21207.1 ID=prot_F-serratus_M_contig990.21207.1|Name=mRNA_F-serratus_M_contig990.21207.1|organism=Fucus serratus male|type=polypeptide|length=100bp MNNDGIVIKYESMEYRTAVHHAALILDLASKSKKFMRELFEPPDNEVESLback to top mRNA from alignment at F-serratus_M_contig990:113174..115339- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig990.21207.1 ID=mRNA_F-serratus_M_contig990.21207.1|Name=mRNA_F-serratus_M_contig990.21207.1|organism=Fucus serratus male|type=mRNA|length=2166bp|location=Sequence derived from alignment at F-serratus_M_contig990:113174..115339- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig990:113174..115339- >mRNA_F-serratus_M_contig990.21207.1 ID=mRNA_F-serratus_M_contig990.21207.1|Name=mRNA_F-serratus_M_contig990.21207.1|organism=Fucus serratus male|type=CDS|length=600bp|location=Sequence derived from alignment at F-serratus_M_contig990:113174..115339- (Fucus serratus male)back to top |