mRNA_F-serratus_M_contig960.20928.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig960.20928.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE) HSP 1 Score: 344 bits (882), Expect = 1.070e-108 Identity = 174/269 (64.68%), Postives = 203/269 (75.46%), Query Frame = 2 Query: 5 PGDLALGTTDSGSDIKWVGTVGLLDTYGVLWDWRPCHLAVKAAEQAFGVSADPAKSKNPAARELLRHVTKVVEKVNKSPTLKSKFDDLQLEMVRDVFKIVKHAPQRWLSLTRTLERIIRLWHVLRKLYSDEGMVFPLDQGSNKDGILQLYSLKQPLSAITRDGQFAGVPMTAEIHMKFGFLKVHVLDPTKGLKVFDTPPIGEVVLDEPGAQKRKLPTTMVSPDALHPVAKTTRDELCKALVSRFYGRVWDPLTPDPSFFRDSAVLLTPP 811 P LA GTTDSGSD+K V T L Y VLW W CHL VKAAEQA+G+ DPAKSKNP AR++L+ V KVVE +NKSP K+KF+DLQ++M+ ++FK+VKHAPQRWLSLTRT+ER IRLWHVLRKLYSDEG FPL++G KD ILQLYSL QPLS+ITRDGQ+ PM A+I MKFG L VLDP+K LKVF PPIGE L + G QK+ LP MV P+ LH + TR E+ +ALVSRFYGRVWD T DP FF +A LLTPP Sbjct: 328 PSHLASGTTDSGSDVKAVSTNCLWPMYAVLWCWCFCHLMVKAAEQAYGIHLDPAKSKNPQARDILKKVVKVVENLNKSPNFKAKFEDLQVDMLGEIFKMVKHAPQRWLSLTRTVERTIRLWHVLRKLYSDEGRNFPLEEGDTKDAILQLYSLLQPLSSITRDGQYGDAPMMADIFMKFGMLNTDVLDPSKDLKVFQVPPIGEDGLPDRGQQKKPLPFKMVPPEQLHAAVEKTRVEMRRALVSRFYGRVWDENTLDPPFFCHAACLLTPP 596
BLAST of mRNA_F-serratus_M_contig960.20928.1 vs. uniprot
Match: A0A6H5KEE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE6_9PHAE) HSP 1 Score: 325 bits (833), Expect = 1.610e-105 Identity = 162/269 (60.22%), Postives = 198/269 (73.61%), Query Frame = 2 Query: 5 PGDLALGTTDSGSDIKWVGTVGLLDTYGVLWDWRPCHLAVKAAEQAFGVSADPAKSKNPAARELLRHVTKVVEKVNKSPTLKSKFDDLQLEMVRDVFKIVKHAPQRWLSLTRTLERIIRLWHVLRKLYSDEGMVFPLDQGSNKDGILQLYSLKQPLSAITRDGQFAGVPMTAEIHMKFGFLKVHVLDPTKGLKVFDTPPIGEVVLDEPGAQKRKLPTTMVSPDALHPVAKTTRDELCKALVSRFYGRVWDPLTPDPSFFRDSAVLLTPP 811 P DLA GTTDSGSD+K GL YGVLW+W CHL VKAAE FG DP KSKNP AR++L++V +V +N+S K+KF+DLQ++++ DV KI APQRWL+ RTLER+IRLWHVLRKLYSD G FPL++G NK+ ILQL+SL Q LS++TRDGQ+ PM A++ MKFG LK+ VLDP+K LKVFD PP+G+ L + QK+ LP MV PD LHPVAK R +L +ALVSR YGRVWD T DPSFF D++ LLTPP Sbjct: 44 PSDLASGTTDSGSDVKSASVNGLYPQYGVLWNWCFCHLMVKAAEDGFGTHVDPQKSKNPEARDMLKNVISMVGTLNRSSNFKAKFEDLQVDLLGDVLKIPNQAPQRWLTQVRTLERVIRLWHVLRKLYSDAGKNFPLEEGDNKNAILQLFSLLQSLSSVTRDGQYGNAPMQADVFMKFGELKMEVLDPSKPLKVFDIPPLGQDGLPDREEQKKALPHKMVEPDDLHPVAKKARSKLGRALVSRLYGRVWDHNTLDPSFFCDASCLLTPP 312
BLAST of mRNA_F-serratus_M_contig960.20928.1 vs. uniprot
Match: A0A6H5JZ66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ66_9PHAE) HSP 1 Score: 315 bits (806), Expect = 1.320e-101 Identity = 159/269 (59.11%), Postives = 199/269 (73.98%), Query Frame = 2 Query: 5 PGDLALGTTDSGSDIKWVGTVGLLDTYGVLWDWRPCHLAVKAAEQAFGVSADPAKSKNPAARELLRHVTKVVEKVNKSPTLKSKFDDLQLEMVRDVFKIVKHAPQRWLSLTRTLERIIRLWHVLRKLYSDEGMVFPLDQGSNKDGILQLYSLKQPLSAITRDGQFAGVPMTAEIHMKFGFLKVHVLDPTKGLKVFDTPPIGEVVLDEPGAQKRKLPTTMVSPDALHPVAKTTRDELCKALVSRFYGRVWDPLTPDPSFFRDSAVLLTPP 811 P DLA GTTDSGSD+K V GL YGVLW+W CHL VKAAE AFG DP SKNP AR +L+++ ++ ++KS L +KF+DLQ++++ +V I APQRWL+L RT+ER+IRLW V+RKLYSD G FPL++G NKD I QLYSL QPLS++TRDGQ+ G+PM A+I+MKFG LK+ VL+ + LKVFD PP+GE L + QK+ LP MV+ D LHPVA+ R+ELC+ALVSRFYGRVWD DPS F D+A LLTPP Sbjct: 76 PSDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCYCHLMVKAAEDAFGTRPDPQMSKNPEARNMLKNLIGIIGTLHKS-NLTAKFEDLQVDLLGEVLNIPNQAPQRWLTLVRTMERVIRLWRVMRKLYSDAGKNFPLEEGDNKDCINQLYSLLQPLSSVTRDGQYGGLPMLADIYMKFGMLKMGVLNSSADLKVFDIPPLGEDGLPDREEQKKPLPHKMVAHDELHPVAQKARNELCRALVSRFYGRVWDDSCLDPSMFCDAACLLTPP 343
BLAST of mRNA_F-serratus_M_contig960.20928.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE) HSP 1 Score: 311 bits (796), Expect = 2.130e-98 Identity = 157/269 (58.36%), Postives = 197/269 (73.23%), Query Frame = 2 Query: 5 PGDLALGTTDSGSDIKWVGTVGLLDTYGVLWDWRPCHLAVKAAEQAFGVSADPAKSKNPAARELLRHVTKVVEKVNKSPTLKSKFDDLQLEMVRDVFKIVKHAPQRWLSLTRTLERIIRLWHVLRKLYSDEGMVFPLDQGSNKDGILQLYSLKQPLSAITRDGQFAGVPMTAEIHMKFGFLKVHVLDPTKGLKVFDTPPIGEVVLDEPGAQKRKLPTTMVSPDALHPVAKTTRDELCKALVSRFYGRVWDPLTPDPSFFRDSAVLLTPP 811 P DLA GTTDSGSD+K V GL YGVLW+W CHL +KAAE AFG DP KSKNP A +L+++ +V ++KS L +KF+DLQ++++ +V KI APQRWL+L RT+ER+IRLWHVLRKLYSD G F L++G NKD I QLYSL Q LS++TRDGQ+ G+PM A+I++KFG LK+ VL+ + LKVFD PP+GE L + QK+ L MV+ D LHPVA+ RD+LC+ALVSRFYG VWD DPS F D+A LLTPP Sbjct: 84 PSDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCYCHLMIKAAEDAFGTHPDPQKSKNPEAHNMLKNLIGIVGTLHKSLNLTAKFEDLQVDLLGEVLKIPNQAPQRWLTLVRTMERVIRLWHVLRKLYSDAGKNFILEEGDNKDCIPQLYSLLQSLSSVTRDGQYGGLPMLADIYIKFGMLKMGVLNSSADLKVFDIPPLGEDGLPDRKEQKKPLRHKMVAHDELHPVAQKARDKLCRALVSRFYGHVWDDSCLDPSMFCDAACLLTPP 352
BLAST of mRNA_F-serratus_M_contig960.20928.1 vs. uniprot
Match: A0A6H5K0P1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0P1_9PHAE) HSP 1 Score: 300 bits (767), Expect = 1.290e-93 Identity = 151/259 (58.30%), Postives = 191/259 (73.75%), Query Frame = 2 Query: 35 SGSDIKWVGTVGLLDTYGVLWDWRPCHLAVKAAEQAFGVSADPAKSKNPAARELLRHVTKVVEKVNKSPTLKSKFDDLQLEMVRDVFKIVKHAPQRWLSLTRTLERIIRLWHVLRKLYSDEGMVFPLDQGSNKDGILQLYSLKQPLSAITRDGQFAGVPMTAEIHMKFGFLKVHVLDPTKGLKVFDTPPIGEVVLDEPGAQKRKLPTTMVSPDALHPVAKTTRDELCKALVSRFYGRVWDPLTPDPSFFRDSAVLLTPP 811 SGSD+K V GL YGVLW+W CHL VKAAE AFG DP SKNP AR +L+++ ++ ++KS L +KF+DLQ++++ +V I APQRWL+L RT+ER+IRLW V+RKLYSD G FPL++G NKD I QLYSL QPLS++TRDGQ+ G+PM A+I+MKFG LK+ VL+ + LKVFD PP+GE L + QK+ LP MV+ D LHPVA+ R+ELC+ALVSRFYGRVWD DPS F D+A LLTPP Sbjct: 215 SGSDVKSVSVNGLHPKYGVLWNWCYCHLMVKAAEDAFGTRPDPQMSKNPEARNMLKNLIGIIGTLHKS-NLTAKFEDLQVDLLGEVLNIPNQAPQRWLTLVRTMERVIRLWRVMRKLYSDAGKNFPLEEGDNKDCINQLYSLLQPLSSVTRDGQYGGLPMLADIYMKFGMLKMGVLNSSADLKVFDIPPLGEDGLPDREEQKKPLPHKMVAHDELHPVAQKARNELCRALVSRFYGRVWDDSCLDPSMFCDAACLLTPP 472
BLAST of mRNA_F-serratus_M_contig960.20928.1 vs. uniprot
Match: A0A6H5L1G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1G0_9PHAE) HSP 1 Score: 288 bits (737), Expect = 5.400e-88 Identity = 158/279 (56.63%), Postives = 189/279 (67.74%), Query Frame = 2 Query: 11 DLALGTTDSGSDIKWVGTVGLLDTYGVLWDWRPCHLAVKAAEQAFGVSADPAKSKNPAARELLRHVTKVVEKVNKSPTLKSKFDDLQLEMVRDVFKIVKHAPQRWLSLTRTLERIIRLWHVLRKLYSDEGMVFPLDQGSNKDGILQLYSLKQPLSAITRDGQFAGVPMTAEIHMKFGFLKVHVLDPTKGLKVFDTPPIGEVVLDEPGAQ-------------KRKLPTTMVSPDALHPVAKTTRDELCKALVSRFYGRVWDPLTPDPSFFRDSAVLLTP 808 DLA GTTDSGSD+K + LL + WDW CHLA +AAEQAFG SADP K KN AR +++ V K KVN+SP K KFD+ QL+M +V KI KHAPQRWLSL R +ERIIRLWHVLRK+Y+++G+ FPLD+G NKD ILQLYSL +PL+AITRDGQ+ VPM+AE+HM F LK LDPT LKVFD PP D P A K+ LP V P AL PVA TR+ L KALV + Y R+WD + DPS FR+++VLLTP Sbjct: 313 DLAGGTTDSGSDVKAMCVNFLLAQHKGSWDWCVCHLADRAAEQAFGTSADPQKPKNKDARGVVQLVIKAAAKVNQSPIFKQKFDEAQLQMTGEVLKIRKHAPQRWLSLVRVMERIIRLWHVLRKVYANDGVEFPLDKGDNKDNILQLYSLLRPLAAITRDGQYGAVPMSAEMHMAFAELKQEGLDPTGPLKVFDIPPTP----DSPAALQSDEELPVTVNTGKKPLPHKTVEPAALRPVATKTRELLGKALVEKLYARLWDEESADPSPFRNASVLLTP 587
BLAST of mRNA_F-serratus_M_contig960.20928.1 vs. uniprot
Match: A0A6H5JTT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT2_9PHAE) HSP 1 Score: 272 bits (696), Expect = 1.860e-86 Identity = 148/269 (55.02%), Postives = 183/269 (68.03%), Query Frame = 2 Query: 5 PGDLALGTTDSGSDIKWVGTVGLLDTYGVLWDWRPCHLAVKAAEQAFGVSADPAKSKNPAARELLRHVTKVVEKVNKSPTLKSKFDDLQLEMVRDVFKIVKHAPQRWLSLTRTLERIIRLWHVLRKLYSDEGMVFPLDQGSNKDGILQLYSLKQPLSAITRDGQFAGVPMTAEIHMKFGFLKVHVLDPTKGLKVFDTPPIGEVVLDEPGAQKRKLPTTMVSPDALHPVAKTTRDELCKALVSRFYGRVWDPLTPDPSFFRDSAVLLTPP 811 P DLA GTTDSG D+K V GL +GVLW+ HL VKAAE FG DP KSKNP AR++L+ + +V +++S K+KF DLQ+++ +VF APQRWL+L TLER+IRLWHVLRKLYSD G FPL++G D ILQL SL QPLS++TRDGQ+ G PM LK+ VLDP++ LKVFD PP+GE L + QK+ LP MV+ D L PVA+ R+ELC+AL +RFYGRVWD T DPS D+A LLTPP Sbjct: 52 PSDLASGTTDSGLDVKSVSVNGLHPQFGVLWNCCFYHLMVKAAEDGFGTHVDPQKSKNPKARDMLKKLINLVGTLHRSSNFKAKFGDLQVDVWGEVFP--NQAPQRWLTLVPTLERVIRLWHVLRKLYSDTGKTFPLEEGDITDCILQLNSLLQPLSSVTRDGQYGGAPM----------LKMRVLDPSEELKVFDIPPLGEDGLPDRKEQKKALPHHMVAHDYLDPVAQKERNELCRALGTRFYGRVWDTSTLDPSVLCDAACLLTPP 308
BLAST of mRNA_F-serratus_M_contig960.20928.1 vs. uniprot
Match: A0A6H5L8D8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8D8_9PHAE) HSP 1 Score: 264 bits (675), Expect = 1.190e-83 Identity = 132/228 (57.89%), Postives = 168/228 (73.68%), Query Frame = 2 Query: 11 DLALGTTDSGSDIKWVGTVGLLDTYGVLWDWRPCHLAVKAAEQAFGVSADPAKSKNPAARELLRHVTKVVEKVNKSPTLKSKFDDLQLEMVRDVFKIVKHAPQRWLSLTRTLERIIRLWHVLRKLYSDEGMVFPLDQGSNKDGILQLYSLKQPLSAITRDGQFAGVPMTAEIHMKFGFLKVHVLDPTKGLKVFDTPPIGEVVLDEPGAQKRKLPTTMVSPDALHPVAK 694 DLA GT DSGSD+K V GL +GVLW+W CHL VKAAE FG DP KSKNP AR++L+ + +V +++S K+KFDDLQ++++ +V KI AP+RWL+L RTLER+IRLWHVLRKLYSD G FPL++G NKD ILQLYSL QP S++TRDGQ+ G PM A+I+MK G LK+ VLDP++ LKVFD PP+GE L + QK+ LP +V+ D L PVA+ Sbjct: 97 DLASGTADSGSDVKSVSFNGLHPQFGVLWNWCFCHLMVKAAEDGFGTHVDPQKSKNPEARDMLKKLINLVGTLHRSSNFKAKFDDLQVDVLGEVLKIPNQAPKRWLTLVRTLERVIRLWHVLRKLYSDTGKTFPLEEGDNKDCILQLYSLLQPPSSVTRDGQYGGAPMLADIYMKCGMLKMRVLDPSEELKVFDIPPLGEDSLPDREEQKKALPHKVVAHDDLRPVAQ 324
BLAST of mRNA_F-serratus_M_contig960.20928.1 vs. uniprot
Match: A0A6H5K8W6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W6_9PHAE) HSP 1 Score: 268 bits (686), Expect = 4.100e-83 Identity = 147/269 (54.65%), Postives = 178/269 (66.17%), Query Frame = 2 Query: 5 PGDLALGTTDSGSDIKWVGTVGLLDTYGVLWDWRPCHLAVKAAEQAFGVSADPAKSKNPAARELLRHVTKVVEKVNKSPTLKSKFDDLQLEMVRDVFKIVKHAPQRWLSLTRTLERIIRLWHVLRKLYSDEGMVFPLDQGSNKDGILQLYSLKQPLSAITRDGQFAGVPMTAEIHMKFGFLKVHVLDPTKGLKVFDTPPIGEVVLDEPGAQKRKLPTTMVSPDALHPVAKTTRDELCKALVSRFYGRVWDPLTPDPSFFRDSAVLLTPP 811 P LA GTTDSGSD+K V GL +GVLW+W CHL +KAAEQ F S D KSKNPAAR+LL+ V KVVE +NKS L +KF+DLQ++++ +VFK+VKHAPQRWL LTRTLERIIRLWH PLS+ITRD Q+ G PMTAEI MKF LK +VLD ++ L+VFD P +GE L G QK+ LP+ MVS D LHP R+ELC+AL+SR Y RVW+ +P+PSFF D+A LLTPP Sbjct: 39 PSYLASGTTDSGSDVKAVSINGLWKHFGVLWNWCFCHL-MKAAEQPFCTSLDTVKSKNPAARDLLKTVIKVVETLNKSSNLGAKFEDLQVDLLGEVFKVVKHAPQRWLGLTRTLERIIRLWH--------------------------------PLSSITRDVQYGGAPMTAEIFMKFATLKTNVLDMSEPLRVFDIPALGEDGLPNRGEQKKALPSKMVSADQLHPTTTLAREELCRALMSRLYERVWNEQSPNPSFFCDAACLLTPP 274
BLAST of mRNA_F-serratus_M_contig960.20928.1 vs. uniprot
Match: A0A6H5KFQ8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ8_9PHAE) HSP 1 Score: 262 bits (670), Expect = 1.060e-80 Identity = 132/224 (58.93%), Postives = 169/224 (75.45%), Query Frame = 2 Query: 140 AFGVSADPAKSKNPAARELLRHVTKVVEKVNKSPTLKSKFDDLQLEMVRDVFKIVKHAPQRWLSLTRTLERIIRLWHVLRKLYSDEGMVFPLDQGSNKDGILQLYSLKQPLSAITRDGQFAGVPMTAEIHMKFGFLKVHVLDPTKGLKVFDTPPIGEVVLDEPGAQKRKLPTTMVSPDALHPVAKTTRDELCKALVSRFYGRVWDPLTPDPSFFRDSAVLLTPP 811 AFGV DP KSKNP AR++++ V KVVE +NKS L++KF+DL+ E++ +V K+VKHAPQRWLS+ RT+ERIIRLWH LRKLYSDEG VFPL++G NK+G+LQLYSL +PL ITRDGQ+ G PM A+I+MK G LK+ +L+ K LKV++TP +GE L + Q + LP MV+ LHP AK R+ELC+ALV+R +GR W DPSF DS+ LLTPP Sbjct: 28 AFGVHPDPTKSKNPGARDVIKVVIKVVENLNKSSNLRAKFEDLETELLGEVLKVVKHAPQRWLSMVRTMERIIRLWHALRKLYSDEGKVFPLEEGDNKNGVLQLYSLLEPLCMITRDGQYGGAPMMADIYMKMGILKMGMLNLEKELKVYETPRVGENGLPDREEQNKPLPHKMVAHGNLHPAAKKAREELCRALVARLFGRYWAGCV-DPSFV-DSSCLLTPP 249 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig960.20928.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig960.20928.1 >prot_F-serratus_M_contig960.20928.1 ID=prot_F-serratus_M_contig960.20928.1|Name=mRNA_F-serratus_M_contig960.20928.1|organism=Fucus serratus male|type=polypeptide|length=190bp MVRDVFKIVKHAPQRWLSLTRTLERIIRLWHVLRKLYSDEGMVFPLDQGSback to top mRNA from alignment at F-serratus_M_contig960:6255..7185+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig960.20928.1 ID=mRNA_F-serratus_M_contig960.20928.1|Name=mRNA_F-serratus_M_contig960.20928.1|organism=Fucus serratus male|type=mRNA|length=931bp|location=Sequence derived from alignment at F-serratus_M_contig960:6255..7185+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig960:6255..7185+ >mRNA_F-serratus_M_contig960.20928.1 ID=mRNA_F-serratus_M_contig960.20928.1|Name=mRNA_F-serratus_M_contig960.20928.1|organism=Fucus serratus male|type=CDS|length=1140bp|location=Sequence derived from alignment at F-serratus_M_contig960:6255..7185+ (Fucus serratus male)back to top |