mRNA_F-serratus_M_contig955.20898.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig955.20898.1 vs. uniprot
Match: A0A6H5L6D7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D7_9PHAE) HSP 1 Score: 236 bits (603), Expect = 4.220e-77 Identity = 128/178 (71.91%), Postives = 144/178 (80.90%), Query Frame = 1 Query: 1 MVRFIV-ASAVFALLLGFSTVDASKK----NIYFTVYERQSDDGPRHSPLFNLPVG-GEEGQFPSKMVLFNNDL*GSESGLINEDHGDIIGYNQGHCVETVASEGFIAECFFTYVFDDGSLTANGPFNFDASSGSVLPSVLAVTGGTGDYAATQGEAALSAGPAEDFSSLQFDFKLKR 516 MVRFIV AS FALLLGF+TV+AS+ ++ FTV+ERQSDDGPRHSPLF LPV E+ ++PSKMVLFNNDL GSE LI+E ++GYNQGHCVETVAS GFIAECFFTYVFDDGSLTANGPFNFDA G VLPS LAVTGGTG+Y G +SAGPAE+F SLQFDFKLK+ Sbjct: 1 MVRFIVNASVAFALLLGFATVEASRGKHEGSVEFTVFERQSDDGPRHSPLFTLPVPEAEDVEYPSKMVLFNNDLYGSEDDLIDEVQDALLGYNQGHCVETVASGGFIAECFFTYVFDDGSLTANGPFNFDAEDG-VLPSFLAVTGGTGEYDGALGCVEVSAGPAEEFPSLQFDFKLKK 177
BLAST of mRNA_F-serratus_M_contig955.20898.1 vs. uniprot
Match: D8LRY1_ECTSI (Potential Allene oxide cyclase, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRY1_ECTSI) HSP 1 Score: 176 bits (445), Expect = 6.080e-54 Identity = 90/115 (78.26%), Postives = 96/115 (83.48%), Query Frame = 1 Query: 181 MVLFNNDL*GSESGLINEDHGDIIGYNQGHCVETVASEGFIAECFFTYVFDDGSLTANGPFNFDASSGSVLPSVLAVTGGTGDYAATQGEAALSAGPAEDFSSLQFDFKLKRLSR 525 MVLFNNDL GSE LI+ED ++IGYNQGHCVETVAS GFIAECFFTYVFDDGSLTANGPFNFD G VLPS LAVTGGTG+Y QG +SAGPAE+F SLQFDFKLKR SR Sbjct: 1 MVLFNNDLYGSEDHLIDEDQEELIGYNQGHCVETVASGGFIAECFFTYVFDDGSLTANGPFNFDVEDG-VLPSFLAVTGGTGEYDGAQGCVEVSAGPAEEFPSLQFDFKLKRKSR 114
BLAST of mRNA_F-serratus_M_contig955.20898.1 vs. uniprot
Match: A0A6N6VM22_9HYPH (Allene-oxide cyclase n=1 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VM22_9HYPH) HSP 1 Score: 52.0 bits (123), Expect = 3.110e-5 Identity = 37/119 (31.09%), Postives = 61/119 (51.26%), Query Frame = 1 Query: 154 GEEGQFPSKMVLFNNDL*GSESGLINEDHGDIIGYNQGHCVETVASEGFIAECFFTYVFDDGSLTANGPFNFDASSGSVLPSVLAVTGGTGDYAATQGEAALSAGPAEDFSSLQFDFKL 510 G +G ++ F N++ ++ + + +G + G+CV TVA + + EC +T G +T GPF DA S+LA+TGG+G+YA +G+ L A A+ S F + L Sbjct: 52 GAKGDSNGDVLTFANEV-------FDKSNKEKVGTDNGYCVRTVAGKAW--ECIWTLSLAKGQITVEGPF-LDAGD-----SMLAITGGSGEYAHARGDMLLHARNAQG-SEYDFTYNL 154 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig955.20898.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig955.20898.1 >prot_F-serratus_M_contig955.20898.1 ID=prot_F-serratus_M_contig955.20898.1|Name=mRNA_F-serratus_M_contig955.20898.1|organism=Fucus serratus male|type=polypeptide|length=69bp MVRFIVASAVFALLLGFSTVDASKKNIYFTVYERQSDDGPRHSPLFNLPVback to top mRNA from alignment at F-serratus_M_contig955:193853..195822- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig955.20898.1 ID=mRNA_F-serratus_M_contig955.20898.1|Name=mRNA_F-serratus_M_contig955.20898.1|organism=Fucus serratus male|type=mRNA|length=1970bp|location=Sequence derived from alignment at F-serratus_M_contig955:193853..195822- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig955:193853..195822- >mRNA_F-serratus_M_contig955.20898.1 ID=mRNA_F-serratus_M_contig955.20898.1|Name=mRNA_F-serratus_M_contig955.20898.1|organism=Fucus serratus male|type=CDS|length=414bp|location=Sequence derived from alignment at F-serratus_M_contig955:193853..195822- (Fucus serratus male)back to top |