mRNA_F-serratus_M_contig128.2076.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig128.2076.1
Unique NamemRNA_F-serratus_M_contig128.2076.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig128.2076.1 vs. uniprot
Match: D7G2V0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2V0_ECTSI)

HSP 1 Score: 308 bits (788), Expect = 1.250e-96
Identity = 143/198 (72.22%), Postives = 171/198 (86.36%), Query Frame = 2 
Query:  350 EYGRCDILVNNAGIAFKASDPTPFKEQAEPTLKTNFFDTVALTEKMLPLIRKSPAGRIVNVASMSGQLSILKSRELREAFTSLVLTKPELQLLMRKFVNDVKSGQHEAEGWPSTCYGMSKLGLIAYTVIAARME--AGSSVLVNSCCPGYCDTDMTSHRGHLSPEEGARTPFMLTQMKDLAKGGVTGAFFQREALSRW 937
            E+GRCD+LVNNAGIAFK SDPTPFK+QAEPTLKTNFFDT A TEKMLPL+RKS AGR+VNVASM+G LSIL S++ R AFT+  LTK  L  +M +FV DVK+G+H+  GWP+TCYGMSKLG+IAYT +AAR+E  AGS+V +N+CCPGYCDTDMTSHRG L+PEEGARTPFMLTQMK + +GG+TG FF++EAL+ W
Sbjct:  107 EFGRCDVLVNNAGIAFKGSDPTPFKDQAEPTLKTNFFDTAAFTEKMLPLVRKSDAGRVVNVASMAGHLSILGSQDRRNAFTNPALTKERLSAMMAQFVGDVKAGRHQGGGWPNTCYGMSKLGVIAYTKVAARVEREAGSTVTINACCPGYCDTDMTSHRGTLTPEEGARTPFMLTQMKSVDEGGLTGEFFRKEALAEW 304
[Close]
BLAST of mRNA_F-serratus_M_contig128.2076.1 vs. uniprot
Match: A0A7S2UVT3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVT3_9STRA)

HSP 1 Score: 219 bits (558), Expect = 9.000e-63
Identity = 115/196 (58.67%), Postives = 141/196 (71.94%), Query Frame = 2 
Query:  350 EYGRCDILVNNAGIAFKASDPTPFKEQAEPTLKTNFFDTVALTEKMLPLIRKSPAGRIVNVASMSGQLSILKSRELREAFTSLVLTKPELQLLMRKFVNDVKSGQHEAEGWPSTCYGMSKLGLIAYTVIAARMEAGSSVLVNSCCPGYCDTDMTSHRGHLSPEEGARTPFMLTQMKDLAKGGVTGAFFQREALSRW 937
            EYGR D+LVNNA IAFK +DPTPF+ QA PTL+TNF+ TV +T+ +LPL+R+SPA RIVNVASMSG L IL S E ++ F+S  LT+P L  LMR F  DV++G H   GWPSTCYGMSKLG+IA+T I AR E G  ++VN CCPG C TDM+S  G  + EEGARTP++LTQM     G  +G F+  E    W
Sbjct:  107 EYGRLDVLVNNAAIAFKGADPTPFQYQAAPTLRTNFWATVQVTDALLPLLRQSPAARIVNVASMSGHLRIL-SHERQDIFSSSSLTRPVLYDLMRAFEADVQAGVHHQNGWPSTCYGMSKLGVIAFTKILAREEPG--MVVNCCCPGGCRTDMSSGSGSKTAEEGARTPYLLTQMPP---GTKSGGFWSGEREIVW 296
[Close]
BLAST of mRNA_F-serratus_M_contig128.2076.1 vs. uniprot
Match: A0A7S0XB88_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XB88_9STRA)

HSP 1 Score: 218 bits (556), Expect = 1.220e-62
Identity = 110/196 (56.12%), Postives = 136/196 (69.39%), Query Frame = 2 
Query:  350 EYGRCDILVNNAGIAFKASDPTPFKEQAEPTLKTNFFDTVALTEKMLPLIRKSPAGRIVNVASMSGQLSILKSRELREAFTSLVLTKPELQLLMRKFVNDVKSGQHEAEGWPSTCYGMSKLGLIAYTVIAARMEAGSSVLVNSCCPGYCDTDMTSHRGHLSPEEGARTPFMLTQMKDLAKGGVTGAFFQREALSRW 937
            +YG+CD+LVNNA IAFK SDPTPFK QAEPT+KTN+F T++LT+ MLPL++ S + RIVNVAS +G L IL S E ++ FTS  LT  EL   M +FVNDVK+ + +   WP +CYG SKLG+IA T + AR      +L+N+CCPGYC TDM+SHRG  + E GARTPF L     L  G VTG FF  E    W
Sbjct:   94 DYGKCDVLVNNAAIAFKGSDPTPFKLQAEPTIKTNYFGTLSLTKLMLPLLQNSTSPRIVNVASQAGALGILPSNERKKFFTSESLTVDELTEAMNQFVNDVKNDKLKENDWPGSCYGTSKLGVIALTKVLARNYP--DILINACCPGYCQTDMSSHRGTRTAENGARTPFYLAT---LTAGSVTGKFFYDEKELAW 284
[Close]
BLAST of mRNA_F-serratus_M_contig128.2076.1 vs. uniprot
Match: A0A7S0F9Q4_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0F9Q4_9DINO)

HSP 1 Score: 214 bits (544), Expect = 1.360e-60
Identity = 107/196 (54.59%), Postives = 144/196 (73.47%), Query Frame = 2 
Query:  350 EYGRCDILVNNAGIAFKASDPTPFKEQAEPTLKTNFFDTVALTEKMLPLIRKSPAGRIVNVASMSGQLSILKSRELREAFTSLVLTKPELQLLMRKFVNDVKSGQHEAEGWPSTCYGMSKLGLIAYTVIAARMEAGSSVLVNSCCPGYCDTDMTSHRGHLSPEEGARTPFMLTQMKDLAKGGVTGAFFQREALSRW 937
            +YGR D+LVNNA IAFK +DPTPF+ Q  PTL+TNF+ TVALT+++LPL+R+  + R+VNVASM+G+L  + S  L+  F+S  LT+ EL  L+RKF +DV +G+H  EGW ++ YG+SKL LIAYT++ AR E G+++  N+CCPGYCDTDM+SHRG  SP EGAR   ML  ++D    G TGAF +   +S W
Sbjct:  117 KYGRLDVLVNNAAIAFKGADPTPFQGQTLPTLRTNFWGTVALTDQLLPLLRRGRSPRVVNVASMAGRLGQV-SGSLQRRFSSPALTRDELFALVRKFQDDVAAGRHRQEGWGNSNYGLSKLALIAYTLLVAR-EEGNAMRANACCPGYCDTDMSSHRGPRSPAEGARNATMLALLRD---DGPTGAFVRDMQISEW 307
[Close]
BLAST of mRNA_F-serratus_M_contig128.2076.1 vs. uniprot
Match: A0A7S3GV84_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GV84_9STRA)

HSP 1 Score: 209 bits (531), Expect = 3.800e-59
Identity = 105/200 (52.50%), Postives = 136/200 (68.00%), Query Frame = 2 
Query:  350 EYGRCDILVNNAGIAFKASDPTPFKEQAEPTLKTNFFDTVALTEKMLPLIRKSPAGRIVNVASMSGQLSILKSRELREAFTSLVLTKPELQLLMRKFVNDVKSGQHEAEGWPSTCYGMSKLGLIAYTVIAARMEA----GSSVLVNSCCPGYCDTDMTSHRGHLSPEEGARTPFMLTQMKDLAKGGVTGAFFQREALSRW 937
            EYG  DILVNNA IAFK SDPTPFKEQ  PT++ NFF T+ +TE ++PL++K+ + RIVNVAS SG L ILKS EL+E F +       L+ L+ ++V+ V+ G H  +GWP++ YG+SKL +IA T I A+ EA    G + L+N+CCPGYCDTDMTSH+G    E GARTP ML  + ++     TG FF  EA   W
Sbjct:   75 EYGHVDILVNNAAIAFKESDPTPFKEQTLPTIEPNFFGTMRITESLMPLLQKAESPRIVNVASQSGHLRILKSEELKERFVNCPSI-DALENLVNEYVSSVQDGTHTEKGWPNSNYGISKLAVIALTRILAKREAEANPGKNFLINACCPGYCDTDMTSHKGPRPAEHGARTPAMLALLSEVGPVAPTGKFFFDEAEVEW 273
[Close]
BLAST of mRNA_F-serratus_M_contig128.2076.1 vs. uniprot
Match: A0A836C9X3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9X3_9STRA)

HSP 1 Score: 209 bits (531), Expect = 3.800e-59
Identity = 110/195 (56.41%), Postives = 131/195 (67.18%), Query Frame = 2 
Query:  365 DILVNNAGIAFKASDPTPFKEQAEPTLKTNFFDTVALTEKMLPLIRKSPAGRIVNVASMSGQLSILKSRELREAFTSLV----LTKPELQLLMRKFVNDVKSGQHEAEGWPSTCYGMSKLGLIAYTVIAARMEAGSSVLVNSCCPGYCDTDMTSHRGHLSPEEGARTPFMLTQMKDLAKGGVTGAFFQREALSRW 937
            D LVNNAG AFK SDPTPF EQAEPT+  NFF TVA TE++LPL+++SP GRIVNVASMSG L I+   ELR  F S      L   EL LL R FV DVK G+H+ +GWP++CYGMSKL LIAYT I A  E   ++ VN+CCPGY  TDM+  +GH  P++GA TPFML      A  G +G F+  E    W
Sbjct:   84 DALVNNAGFAFKGSDPTPFAEQAEPTMDINFFSTVATTERLLPLVKRSPHGRIVNVASMSGHLRIVPDAELRAKFASAGQPGGLGHDELMLLARGFVQDVKEGKHKEKGWPNSCYGMSKLCLIAYTKILAAREP--TLKVNACCPGYVATDMSGQQGHKRPDQGALTPFMLATG---ALDGTSGGFWSDEKRIDW 273
[Close]
BLAST of mRNA_F-serratus_M_contig128.2076.1 vs. uniprot
Match: A0A7S2U7F4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7F4_9STRA)

HSP 1 Score: 204 bits (519), Expect = 3.350e-58
Identity = 105/206 (50.97%), Postives = 132/206 (64.08%), Query Frame = 2 
Query:  320 HRALRV*DGGEYGRCDILVNNAGIAFKASDPTPFKEQAEPTLKTNFFDTVALTEKMLPLIRKSPAGRIVNVASMSGQLSILKSRELREAFTSLVLTKPELQLLMRKFVNDVKSGQHEAEGWPSTCYGMSKLGLIAYTVIAARMEAGSSVLVNSCCPGYCDTDMTSHRGHLSPEEGARTPFMLTQMKDLAKGGVTGAFFQREALSRW 937
            H   R      +G+ D+LVNNAG+AFK +DPTPFKEQ +PTL  NF  T+  TE+MLPL+RK    RIVNVAS SG L  L S+ELR+ F++  LT PEL  L+  F +DV+ G+H   GW ++ YGMSKL LIA T + AR EA   + VN CCPGYCDTDMTSH+GH  P+EGA+   +   M+D   G     FF    +  W
Sbjct:   14 HETFRQQMEENFGKVDVLVNNAGLAFKGADPTPFKEQTKPTLDINFRGTINFTEQMLPLLRKGSDARIVNVASGSGHLGQLPSKELRDKFSAPSLTMPELNQLVDNFESDVQQGKHRETGWGNSNYGMSKLALIAATKVLAREEA-PRIAVNCCCPGYCDTDMTSHKGHRHPKEGAKNAIIPATMEDPPYG----EFFSDFKVGEW 214
[Close]
BLAST of mRNA_F-serratus_M_contig128.2076.1 vs. uniprot
Match: K0SJD2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SJD2_THAOC)

HSP 1 Score: 198 bits (503), Expect = 3.730e-56
Identity = 104/195 (53.33%), Postives = 129/195 (66.15%), Query Frame = 2 
Query:  353 YGRCDILVNNAGIAFKASDPTPFKEQAEPTLKTNFFDTVALTEKMLPLIRKSPAGRIVNVASMSGQLSILKSRELREAFTSLVLTKPELQLLMRKFVNDVKSGQHEAEGWPSTCYGMSKLGLIAYTVIAARMEAGSSVLVNSCCPGYCDTDMTSHRGHLSPEEGARTPFMLTQMKDLAKGGVTGAFFQREALSRW 937
            YG+ D+LVNNAGIAFK SDPTPF+ Q +PTL  NF+ TV  TE+MLPL+RK    RIVNVASM+G L  L+SR L+  F+S  LTK EL  L+ +F  DV SG+H   GW ++ YGMSKL LIA T I AR E G  + VN CCPGYC TDM+SHRG+  P EGAR   +   M+       +G +F    ++ W
Sbjct:    5 YGKVDVLVNNAGIAFKGSDPTPFEGQCKPTLAVNFWGTVDFTEEMLPLLRKGNDARIVNVASMAGHLGQLRSRGLQRKFSSPDLTKDELFSLVEEFQRDVLSGRHTEAGWGNSNYGMSKLALIAMTKIWAREEEGD-ISVNCCCPGYCATDMSSHRGNRHPSEGARNALIPAMMESAP----SGEYFADFGIASW 194
[Close]
BLAST of mRNA_F-serratus_M_contig128.2076.1 vs. uniprot
Match: A0A813EFJ7_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813EFJ7_POLGL)

HSP 1 Score: 202 bits (515), Expect = 5.060e-56
Identity = 107/200 (53.50%), Postives = 139/200 (69.50%), Query Frame = 2 
Query:  350 EYGRCDILVNNAGIAFKASDPTPFKEQAEPTLKTNFFDTVALTEKMLPLIRKSPAG----RIVNVASMSGQLSILKSRELREAFTSLVLTKPELQLLMRKFVNDVKSGQHEAEGWPSTCYGMSKLGLIAYTVIAARMEAGSSVLVNSCCPGYCDTDMTSHRGHLSPEEGARTPFMLTQMKDLAKGGVTGAFFQREALSRW 937
            +YGR D+LVNNA IAFKASDPTPF  Q  PTLKTNFF T  LT+++LPL+R S A     R+VNVASM+G L  + S +L++ F+S  L +  L  L+RKF  DV++ +H+ EGW ++ YG SKL +IAYT + AR E G+ + VN+CCPGYC TDM+++RG  SPE GAR   +L  + D    G +GAFFQ EA S W
Sbjct:  143 KYGRLDVLVNNAAIAFKASDPTPFAGQTGPTLKTNFFGTAELTDRLLPLLRASAASGGQPRLVNVASMAGALRQV-SPQLQQQFSSPALDRAGLDALVRKFAADVRAERHKQEGWGNSNYGFSKLAVIAYTKLVAR-EEGTGMRVNACCPGYCKTDMSNNRGGQSPEVGARNAVLLALLPD---SGPSGAFFQNEANSAW 337
[Close]
BLAST of mRNA_F-serratus_M_contig128.2076.1 vs. uniprot
Match: A0A7S2A0J2_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A0J2_TRICV)

HSP 1 Score: 199 bits (505), Expect = 4.490e-55
Identity = 106/206 (51.46%), Postives = 133/206 (64.56%), Query Frame = 2 
Query:  320 HRALRV*DGGEYGRCDILVNNAGIAFKASDPTPFKEQAEPTLKTNFFDTVALTEKMLPLIRKSPAGRIVNVASMSGQLSILKSRELREAFTSLVLTKPELQLLMRKFVNDVKSGQHEAEGWPSTCYGMSKLGLIAYTVIAARMEAGSSVLVNSCCPGYCDTDMTSHRGHLSPEEGARTPFMLTQMKDLAKGGVTGAFFQREALSRW 937
            HR  R      YG+ D+L NNA  AFK SDPTPF+ Q +PTL  NF  TV LT ++LPL+R+    RIVNVASM+G LS L+S+ELR+ F++  LT  EL+ L+ KF  DVK+G H  EGW ++ YG+SKL +IA T + AR EA + V VN CCPG CDTDMTSHRG   P +GA+   +   MKD      TG FF+    S W
Sbjct:   96 HRNFRNVVEERYGKIDVLCNNAATAFKGSDPTPFEAQCKPTLDVNFRGTVDLTLELLPLVRRGTDARIVNVASMAGHLSQLRSKELRDQFSAPDLTMSELRGLVDKFEADVKAGTHAQEGWGNSNYGLSKLAVIAATRVWAREEAKNGVTVNCCCPGCCDTDMTSHRGPRHPADGAKNAVLPATMKDPP----TGQFFRDLRPSEW 297
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig128.2076.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2V0_ECTSI1.250e-9672.22Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2UVT3_9STRA9.000e-6358.67Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0XB88_9STRA1.220e-6256.12Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A7S0F9Q4_9DINO1.360e-6054.59Hypothetical protein n=1 Tax=Pyrodinium bahamense ... [more]
A0A7S3GV84_9STRA3.800e-5952.50Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A836C9X3_9STRA3.800e-5956.41Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2U7F4_9STRA3.350e-5850.97Hypothetical protein n=1 Tax=Attheya septentrional... [more]
K0SJD2_THAOC3.730e-5653.33Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A813EFJ7_POLGL5.060e-5653.50Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A7S2A0J2_TRICV4.490e-5551.46Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig128contigF-serratus_M_contig128:488005..494520 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score222.6
Seed ortholog evalue1.2e-55
Seed eggNOG ortholog2880.D7G2V0
KEGG rclassRC00154,RC00205,RC00823,RC01491
KEGG koko:K00079
KEGG ReactionR02581,R02975,R04285,R09420
KEGG Pathwayko00590,ko00790,ko00980,ko01100,ko05204,map00590,map00790,map00980,map01100,map05204
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.oxidation-reduction process
EggNOG OGsCOG1028@1,KOG1208@2759
Ec32 ortholog descriptionShort-chain dehydrogenase/reductase SDR
Ec32 orthologEc-07_005600.1
EC1.1.1.184,1.1.1.189,1.1.1.197
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons8
Model size1927
Cds size456
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig128.2076.1prot_F-serratus_M_contig128.2076.1Fucus serratus malepolypeptideF-serratus_M_contig128 491380..493533 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929218.414039-UTR-F-serratus_M_contig128:488004..4881631622929218.414039-UTR-F-serratus_M_contig128:488004..488163Fucus serratus maleUTRF-serratus_M_contig128 488005..488163 +
1690962755.047992-UTR-F-serratus_M_contig128:488004..4881631690962755.047992-UTR-F-serratus_M_contig128:488004..488163Fucus serratus maleUTRF-serratus_M_contig128 488005..488163 +
1622929218.4249606-UTR-F-serratus_M_contig128:489917..4900841622929218.4249606-UTR-F-serratus_M_contig128:489917..490084Fucus serratus maleUTRF-serratus_M_contig128 489918..490084 +
1690962755.0687714-UTR-F-serratus_M_contig128:489917..4900841690962755.0687714-UTR-F-serratus_M_contig128:489917..490084Fucus serratus maleUTRF-serratus_M_contig128 489918..490084 +
1622929218.436551-UTR-F-serratus_M_contig128:490848..4909451622929218.436551-UTR-F-serratus_M_contig128:490848..490945Fucus serratus maleUTRF-serratus_M_contig128 490849..490945 +
1690962755.0809238-UTR-F-serratus_M_contig128:490848..4909451690962755.0809238-UTR-F-serratus_M_contig128:490848..490945Fucus serratus maleUTRF-serratus_M_contig128 490849..490945 +
1622929218.4474902-UTR-F-serratus_M_contig128:491318..4913791622929218.4474902-UTR-F-serratus_M_contig128:491318..491379Fucus serratus maleUTRF-serratus_M_contig128 491319..491379 +
1690962755.0882292-UTR-F-serratus_M_contig128:491318..4913791690962755.0882292-UTR-F-serratus_M_contig128:491318..491379Fucus serratus maleUTRF-serratus_M_contig128 491319..491379 +
1622929218.549085-UTR-F-serratus_M_contig128:493533..4945201622929218.549085-UTR-F-serratus_M_contig128:493533..494520Fucus serratus maleUTRF-serratus_M_contig128 493534..494520 +
1690962755.1524398-UTR-F-serratus_M_contig128:493533..4945201690962755.1524398-UTR-F-serratus_M_contig128:493533..494520Fucus serratus maleUTRF-serratus_M_contig128 493534..494520 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929218.46456-CDS-F-serratus_M_contig128:491379..4913991622929218.46456-CDS-F-serratus_M_contig128:491379..491399Fucus serratus maleCDSF-serratus_M_contig128 491380..491399 +
1690962755.0959554-CDS-F-serratus_M_contig128:491379..4913991690962755.0959554-CDS-F-serratus_M_contig128:491379..491399Fucus serratus maleCDSF-serratus_M_contig128 491380..491399 +
1622929218.476577-CDS-F-serratus_M_contig128:491600..4917051622929218.476577-CDS-F-serratus_M_contig128:491600..491705Fucus serratus maleCDSF-serratus_M_contig128 491601..491705 +
1690962755.1060362-CDS-F-serratus_M_contig128:491600..4917051690962755.1060362-CDS-F-serratus_M_contig128:491600..491705Fucus serratus maleCDSF-serratus_M_contig128 491601..491705 +
1622929218.489957-CDS-F-serratus_M_contig128:492106..4922301622929218.489957-CDS-F-serratus_M_contig128:492106..492230Fucus serratus maleCDSF-serratus_M_contig128 492107..492230 +
1690962755.1142223-CDS-F-serratus_M_contig128:492106..4922301690962755.1142223-CDS-F-serratus_M_contig128:492106..492230Fucus serratus maleCDSF-serratus_M_contig128 492107..492230 +
1622929218.5051894-CDS-F-serratus_M_contig128:492435..4924901622929218.5051894-CDS-F-serratus_M_contig128:492435..492490Fucus serratus maleCDSF-serratus_M_contig128 492436..492490 +
1690962755.1253395-CDS-F-serratus_M_contig128:492435..4924901690962755.1253395-CDS-F-serratus_M_contig128:492435..492490Fucus serratus maleCDSF-serratus_M_contig128 492436..492490 +
1622929218.5229993-CDS-F-serratus_M_contig128:493381..4935331622929218.5229993-CDS-F-serratus_M_contig128:493381..493533Fucus serratus maleCDSF-serratus_M_contig128 493382..493533 +
1690962755.1400812-CDS-F-serratus_M_contig128:493381..4935331690962755.1400812-CDS-F-serratus_M_contig128:493381..493533Fucus serratus maleCDSF-serratus_M_contig128 493382..493533 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig128.2076.1

>prot_F-serratus_M_contig128.2076.1 ID=prot_F-serratus_M_contig128.2076.1|Name=mRNA_F-serratus_M_contig128.2076.1|organism=Fucus serratus male|type=polypeptide|length=152bp
MLPLIRKSPAGRIVNVASMSGQLSILKSRELREAFTSLVLTKPELQLLMR
KFVNDVKSGQHEAEGWPSTCYGMSKLGLIAYTVIAARMEAGSSVLVNSCC
PGYCDTDMTSHRGHLSPEEGARTPFMLTQMKDLAKGGVTGAFFQREALSR
W*
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mRNA from alignment at F-serratus_M_contig128:488005..494520+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig128.2076.1 ID=mRNA_F-serratus_M_contig128.2076.1|Name=mRNA_F-serratus_M_contig128.2076.1|organism=Fucus serratus male|type=mRNA|length=6516bp|location=Sequence derived from alignment at F-serratus_M_contig128:488005..494520+ (Fucus serratus male)
CCGAAAGCATGATGGTAAATACATTCACCACTCTGCCGTCCCTGACATTA
TCTGCACTTAATAACCTGCTGCTACCGATCGCCCTCTTGGTTTTTCTTCA
CGTGCAGCAAACACATTCAGCCATGTCGAAGGTGGCGGTGGTCACTGGAG
CAAACAAAGGCAAGCAAGCACAACATATTACAAATTTGACAGTCAAAAGG
TTGAGGTGGGAATATTGGTGACGTTCTCGAAAATTATCCTACTGTATTGT
AGATATATTTTGAAACACCCCAAAAGCCTGGTACTACCTGTACCAAATAT
CACCTCAACGCTTTACAAGCCCAAGCTCGAAAGAGCCAGAGACGGGGGCC
GGCGGTCGAAAGGCGTAGGCAACGTGGGGCAGTTGAGGATCCACGCGTTA
TCTGCCGCGCACTGGCGGAGTGATGTGCTCGTGTTTGTGTGTTTAATTGT
TGTTGTTGTTGTCTTCACATTAGAAACCGTTCTGACCTCTGTCCAGTACC
TTCTCGTTCTTACTCAAGGCAAAGAAACGAATTTCCGTAGCAAACCCAAA
ATAAGGTACAGAAAAATCGAAATTATTAAACAAATCCACCCAGAAGGGCG
GAAATAAGGGGTACGCCCAGGCCCAGGCCCTTGCTATTGTAATATACTGC
GGACCTTGGGTTCGGGTTCGGGTTCGGGTTCGGATTAGGTTCTATTTATA
TGTTAATTACTACAGCGAAGGGCCTGGGTGTACCTCTTATTTCCGCCCTT
CTGGGTGAATTTGATTTTTGCCCAGAAAAATAAAATAACATGAAAAAGAC
CCAGAGAAAAGTCCCAACACTTGCGAAAAAATATGTAACAGGTTCTAAAA
ATAACAAGTTCAAAAAAACAAGAAGCAGGTTAGGGCAGGGAAAACCCCAA
AAGAAAGTAGAGCCCATCGCTCCTACTCGGAAGCTGAGTCACAAACAAAA
TATACTATATACATTATAGGAGTGCTGTACCAATACAAGTAAAAATAAAC
TTGAAGAAGCTATCCCCCCTTCCCTACGAAGCCGGGGTGTGTTCATCGTC
GGGTTCCCGCCGACTAGGCCATCCCCACTCAACACCCTGGAGCTCTGAGA
AGGGCAAAACAAATAGTACACTCTGTCCTAGACAATATCTCAACGCGCCC
TTACTATGCCGAGGAGCTCTTTGTCGGGTTTCTCACCAACCAGGCAAACA
CCCCCTTAATATCCCCCCTAATACCCGGGTTTTAGGGTGTGAGGGTGGTC
AGGCAACACGGATGGCCCCTGATGCTACCACCGAGAGGTTACGGGATAAA
AACTAAAGTCGAGGCAAGCGGTCAGGTCAAACCCGCTCATGATGAGAAAA
GAAGCCCCAAGCGGAGGTAAATCAAGGCAGCGTGGGAAAATGTTTTGAGG
GAGCCGGCAGACTGACTCGGAGCTTTACAAATATTGAATATTGTAAAGCA
GTAACGAACAAAATATTCTTGTACGATACGAGTCAACACAAGTACTCACA
CGAGGAGCACGTATTTGCCCGAACAAACGATTTGACATTATTTCCCCTGA
CTGGGGGATGCTCAGAAGGTCTAAATGCGTTCAGGCTTTTCTTTAAACCT
CGTACCCGTACCTACGTACCGGTATGTACACAAAATCAGCGCTACCGTAT
GAGTACCTCTATACAGTACCGATGAAACGCCTCCAAAGGAACGTTACCCG
AAACTCGTAGCTCTAGCACGTCGGTCCCGCCGGTCCCAATGAAACTACGA
TTGATAGCACAGTACCCTGAGCGCGTTTTATATCCAGCATCATCGCTACC
GTAAGTTTTGACACTGTTAAAAGCACTGCTGTAACGTTGGACCAGGTAAC
CGCTTGAAATGCGCCATGAGGGTATTCGTACTCGACCGGTTCGCCGACCT
TGCGTTCTGACAGGGATTGGGTTTGCGATCGCCAAGAAACTGGCTAGCAC
CCCAGGGCATGTCTGCATACTAACCTCGCGTGATCGTGCGCGCGGAGAGC
AAGCGGTCGAGAATCTCAGCCAAGAAGGCTTGAAAGCGATTTTCAAGCAG
CTTGATATCGGAGACCGGTCTTCCATCGAGGTGACTCTCGTGTCTGCTCT
GCTGTGCTCTCTAATATCAACACTGTTAATGCTAATAACTACTGTGCTTC
CGTTGTTCTAGATGGAAAGTGTTCTGTGATGCCATAGGGGAAGGAAGGGG
GAAAGGAGGGAGCTGCTCTGGGCTTAAACTACACAGATTACGCTGAAAAT
GTTGGATGTTACTGATTTTCAGTGAAGCGGACCCAGCGATCTCGAAATGC
TCCGAACGAGCGAACAGGCTCATGGCACCTCCTATCTTTCCGGACGCCGG
GGCGGCGTGGAGTCGTCAGGTGTTTTTCAAGCAAACAATCCAAATGCATT
CCTCGCCAAGAGACAGACAGACCCCTTTCACGTTTCCACCTTCATGTCAT
TCGACGGACGCTTACATCAACGTGAACTCAATACGCTTCTCGCCGACGTT
GTTGGGCGGTGAGCCCGAGACTATGCCCTTATCTTGATGCGTAAAGCCCT
CTTAGCGGAGACGGGCCTTGCCTTACCAACCAATGCACAACACCCGTTGA
GCGAAGAATCTTCGCATCTTGTTGGTCCAGTATGCGACCTTTCTGATAAT
CCAGTGTATATATATTTATTTCTAACATCGTCATCGTCGCCGCATCTCGC
GAGCGCTTCGCGTCTGAGATGGAGCGGGAATACGGCCGTTGCGACATCCA
ATCTTCGCATCTTGTTGGTCCAGTATGCGACCGTTCTAATAATCCGGTGT
ACATACTTATTTTTAACATCGTCATCGTCGCCGCATCTCGCTAGCGCTTC
GCGTCTGAGATGGAGGGGAATACGGCCGTTGCGACATCCTTGTCAACAAC
GCTGGCATCGCCTTCAAGGCGTCCGACCCCACGCCCTTCAAGTGAGCGTC
GCACGTCGAGATCTACGTAGCTAGCTTGACGTTACATGTCCCCGGATAAG
ACCGGGGCCCAAAGAGCGCGGTAGCCCACCAGCAGGCTGGTACCGTTGAA
AGGTGATTCATATCGGTCTTTCGAACCGCAAATCTTCGCCCAGAGGGAAC
ATACCGGTGACCGTTCCAGCCCATTGCTTCAACTGATACGAATCACGAAC
GCTTCGTTTTGCACTTGTGCTGTCCCTTTGTGCACGGCTGGATCTAAACG
CTAAACGAGCAAGTTTTGATGAGGCGATCGTTGCAGCCTCGCCCCGAATT
ACCTCTGTCGCCCCTCATTTTCTCCATACTCTTTTTTTCCCTCGGATGAT
CGCGTTCGATCCAGGGAGCAGGCTGAGCCAACCTTGAAGACTAACTTCTT
TGATACGGTGGCCCTCACGGAGAAAATGCTTCCGCTTATCAGAAAGTGAG
CACGAAGATTCATTCGGCCACGCCCCATAGAACGATCCTCCTCTCCTTTA
CTGCCTAGCCTCTCAACGTTAAGCACGCCTGCGAGACAGCAACTCGTTGT
TTTGCTAGAACCATAGTCGCGTGTGGTAAAGTCAGCACACTGTCTCTGAC
TCCCACACCTTTTTTCGCCCTCCCTCTCGGGGTTGGTTGTTGGCAGGAGC
CCCGCCGGCCGGATCGTGAACGTGGCGAGTATGAGCGGCCAACTGTCGAT
CCTGAAGAGTCGCGAACTACGCGAAGCTTTCACAAGCCTCGTCCTGACAA
AGTAAGAGCACTCGTATATACCCCTGTAGCAGAGGTTCCGCCAATTTTCT
CGTTGGGGGCGGCTGTTTTGCGAAATCGGAGAGCCACCCTTGAGGTGATA
CGTTTCGCGGACTGAACACCACCAAAGTCTCTCTTACGTACAACGCGAGA
AGTGTTTAGAGGCGTTTCGGCGTACATGTACACGGTCTGTGCCTCGTCCT
GGGTCGAAAGAATGGAGAGTATCGTAAGACATTCCAATCCATGGACTCCT
CTTACTGCGGTGGGCGTACGATGCAACACGATGGAGTGTGATTTCTCGAC
GCGGGCTCGATGTTCCCTCCCAACCCCCTTTTCATCTTCTCTTCGCTTTA
TAAATACAAAATTAAATATCGTGTACGTATGAATACTCCCGACCAATAAC
AGGCCGGAGCTGCAGCTATTGATGAGGAAATTCGTGAACGACGTCAAGTC
CGGCCAACACGAGGCGGAGGGTTGGCCCAGCACGTGCTACGGCATGAGCA
AGCTAGGCCTCATTGCCTACACCGTCGTGAGTCGATAACAAAAGCATCAC
TGCTGTATTGGAAGGTGTTGACTTGAATCTCAGGTCTGGGAGATACTCTG
TAGAGAGATCGTTGTAGTTAAATTACGATGCTGCAGCAGGAACCATTAGC
CCGGTGAATCCATGACCCAATATCATCCATTCGCTCGCCTCTTGATTCGA
TTCGGTTTGGGGTTACCGGTGCAAATATTAGATTGCTGCGAGGATGGAGG
CTGGCTCAAGCGTGCTAGTCAACTCGTGTTGCCCAGGTGAGCGCGGGCCT
TGCCAACCGCCGGAGTCTCCCAATGGATGTAGAAAAGAGAGGCGTATAGT
AATTGGTCCATGGTGATCTGCCAAGGCAGCATCAGCTTGGAACTATCTTG
AGGTTTACTGGCTCTGTGCCGGCTGACTCTTAGCAGTGAGTACCAACGGT
ACGCAATTGTGTGACCCGATCAACTCGGGGCAGGCCCGATGGCGTATGGT
GGTTTAAATAAATAAATGGACGCCGCCGCGGAAATCGGGAGGAATCCCAT
AAGCACCAGATTCAGCTTGAGTATGGAGATGAGCAAGGTGACGCGGGACG
GGACTGCCGAGCCCGTCTCGCGAGGCCAAATTCTTAGGCGCGAACGGGGA
AACATTCATTTTCCCTGTTCAGCTAAGCACGAACAGGATTGGCAACCTTA
TCTAGTTGATCCATACTCTTGTTGTATGCGATGACCATAAATACATACAT
ACTACAGTATATCGAGATCCCTAAAACAGCATTTTCCCCATCATCTCGGG
GGAGGGGGCCGGGCGTCACGATTTATTTATTTTTCGTAGCGGGGACTACT
GCTGTACAGTGTTTTCTGGAATCGTACCTCGCCAACATTGGCAAGGGATC
TACTCTTTAACTATCCAACGTTTACCGGTGAGAGTCATCGCTCGGGGTAC
AGTTCGACGGGCCGTTGTCAGGGTCCCACCAGAGTAAAATGTGTTGGGTC
CGCGAAGAAGGTGGGCTGGTAGTGACGCTCTGGATACGCACGCGCTCTCC
ACCGCTCCAAATTACGATGCGGCACCCTCGCCTCGCTTCGCCACCCGAAT
ATTTTGCTCGTTACCCCCCCCCTCCCCCCCGCCCCCCTCCGCGTCGTGTC
TCGCGCCGGTCGGGCGCCATAAAACAGGATACTGTGACACGGACATGACC
TCGCACCGGGGACACCTAAGTCCAGAGGAAGGTGCGCGCACGCCTTTCAT
GCTCACTCAGATGAAGGACCTTGCGAAAGGGGGAGTGACGGGGGCTTTCT
TCCAGAGGGAGGCGTTGTCGCGGTGGTAGGAAGTTAACACATGGAAATAT
GCCGAGGCCAGCAGCACTGATTTGGGGCGCAACAGAAACATAAGTATGGA
AATTGGTCAGAGATTCGAAGTCATCTGCTGGCGCGGAAGCCGGGACCAGG
GAAGCAACAGCGGGTTAGAGACACGACAGGCGATCGCCGCGTGATCTTCA
ACCGTACGCCATATTCGGAGCGAATGCCACCCCGAGAACAAGGCAAGACT
ACCTCTCCCAATATTTCCCCGCCATGAGGAGGCCACTGGCGTGGAAAAGT
ACCATTTGAAAAATCTTGTCGTCGACGATATGTATCTTCAACGCCGCACG
ACTCCTTACTTGAGCTGCGCTTTCAAATCCTGTTATTTTCGCAGAAATGT
AGAGAGACGGAAAGCTTATCACTGACCTTCGGTAGAGGGAAGGGGAGTTC
CTCCTGTATCAACGGAAGCCATTGGAGAGGCGCCGGCATCGTGAACATGT
TCGATGCAAGCCTGCGGGGTAGAGTTTTAACTTGAGGACCAGTAAGAGCT
AGGTGGACGACATATTTGGCGTCGCTAACAGGACGCACAAATCTCTGTAT
ATAATTTGTATGTATGGCTGACTCTTATGGAGCAGTATATCACGATCGAA
AGGTGGCAAATAGGAAGCGTTTTTGTGCCCCTGGTCACGTAAATGCGCGC
ACATATTTTTATCTCCGACCTCAAGCAAACTACGCTAGCGAGCAATCCGA
ATTGCGTTGAGTCAGATTCTATGCGTCGCTTTCAATCCTGAGATCTATTT
CCAAAAGGCGTAGCGCATGCATGCATCAGGGGTATGGCGACCCTTATTTT
GTGTCGATCTCGCCGGAAATGGCATCATGCTTGCCATCTTGTTTGTCATG
TTTGGGCCTCTTCTGCCGAGAGGCCGAGAGGGAGCAAGTGAACTTCGGAA
TAGAGTCTTAGATCATGAAGGCTTCCGATTTATGTTTCGACTGGAAAACA
AACAAAACACTCGACT
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Coding sequence (CDS) from alignment at F-serratus_M_contig128:488005..494520+

>mRNA_F-serratus_M_contig128.2076.1 ID=mRNA_F-serratus_M_contig128.2076.1|Name=mRNA_F-serratus_M_contig128.2076.1|organism=Fucus serratus male|type=CDS|length=912bp|location=Sequence derived from alignment at F-serratus_M_contig128:488005..494520+ (Fucus serratus male)
ATGCTTCCGCTTATCAGAAAATGCTTCCGCTTATCAGAAAGAGCCCCGCC
GGCCGGATCGTGAACGTGGCGAGTATGAGCGGCCAACTGTCGATCCTGAA
GAGTCGCGAACTACGCGAAGCTTTCACAAGCCTCGTCCTGACAAAGAGCC
CCGCCGGCCGGATCGTGAACGTGGCGAGTATGAGCGGCCAACTGTCGATC
CTGAAGAGTCGCGAACTACGCGAAGCTTTCACAAGCCTCGTCCTGACAAA
GCCGGAGCTGCAGCTATTGATGAGGAAATTCGTGAACGACGTCAAGTCCG
GCCAACACGAGGCGGAGGGTTGGCCCAGCACGTGCTACGGCATGAGCAAG
CTAGGCCTCATTGCCTACACCGTCGCCGGAGCTGCAGCTATTGATGAGGA
AATTCGTGAACGACGTCAAGTCCGGCCAACACGAGGCGGAGGGTTGGCCC
AGCACGTGCTACGGCATGAGCAAGCTAGGCCTCATTGCCTACACCGTCAT
TGCTGCGAGGATGGAGGCTGGCTCAAGCGTGCTAGTCAACTCGTGTTGCC
CAGATTGCTGCGAGGATGGAGGCTGGCTCAAGCGTGCTAGTCAACTCGTG
TTGCCCAGGATACTGTGACACGGACATGACCTCGCACCGGGGACACCTAA
GTCCAGAGGAAGGTGCGCGCACGCCTTTCATGCTCACTCAGATGAAGGAC
CTTGCGAAAGGGGGAGTGACGGGGGCTTTCTTCCAGAGGGAGGCGTTGTC
GCGGTGGTAGGATACTGTGACACGGACATGACCTCGCACCGGGGACACCT
AAGTCCAGAGGAAGGTGCGCGCACGCCTTTCATGCTCACTCAGATGAAGG
ACCTTGCGAAAGGGGGAGTGACGGGGGCTTTCTTCCAGAGGGAGGCGTTG
TCGCGGTGGTAG
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