mRNA_F-serratus_M_contig128.2070.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig128.2070.1 vs. uniprot
Match: D7G522_ECTSI (MYND-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G522_ECTSI) HSP 1 Score: 644 bits (1662), Expect = 1.680e-224 Identity = 332/456 (72.81%), Postives = 384/456 (84.21%), Query Frame = 3
Query: 165 IMVNHNEFGVTEEEFEELGNDEGRVQELLLTKMERFISKHPEAAGSDSIKTLTALAVDEMLLNNNLENARLLYQPVPFLKFFEEHGVEGIKSRWADLERAAESVNAVADEQGMLATLRKEVGTACKCLTSGDWERP-KKQEEEPEGLTYAECLAAPFVKIPAKKWNALNQDSRLHVEIRSRLCPPNDKPPYICIVIAPSSRYIFHSFPVEETKADEAFMHVLEGIVMAVVTEGMGMVDEAVRIRPTQLTTTDPLLVKFLSPLLQGTRVSIAASSNKVVNVDPDAKTKESPLIAIMDGIFADFNIEIKKANSRRKLPIGDTMSEEA--KWKSKTSSGKEKYTVDTEAEEREIPDRVMACKGCNELKIRKEVKQCSLCSEAWYCGNECQASDWSAGHKTECSRKNEGKKRSKNGGHVSEDSGEDPDLAGQAEKDALKTFSVDLSAMMPHVGGGGTKKR 1523
+MVNHNEFG+TEEEFEE GNDE VQ+LLL KM+ FI+KHPEAAG D+IKTLTALAVDE+LLN NLENARL++QPVPFLKFF+EHGV GI SR ADL++A E VNAVA E GML L K VG+ CKCLT P K QEEEPEGLTYAE LAAPF+KIP KK NA QDSRLHVEIR RL P+DK PY+CI+IAP+SRY+FHSFP+EET+AD+AFMHVLEGIVM VVTEGMGM++EAVRIRP QLTTTDPLL FLSPLL+GTRVS+AASS+KVVN D DAKTKESPLIAIMDG++ADF I++ KANS+RKLPIGD MS+EA K KS+T+SGKEKY D E E+R+IP+++MACKGCN+LK+R +VKQCSLC+E WYCGNECQASDWS GHK +CSRKNEGKK+ K GHVSEDSG+D L QA KDAL +F++DL +GGGG KK+
Sbjct: 1 MMVNHNEFGITEEEFEEHGNDEAAVQDLLLQKMKNFITKHPEAAGDDAIKTLTALAVDELLLNGNLENARLVFQPVPFLKFFKEHGVAGIDSRRADLDKATEEVNAVATEAGMLEALTKAVGSNCKCLTLFTPGNPLKPQEEEPEGLTYAESLAAPFLKIPVKKTNATGQDSRLHVEIR-RLPAPHDKAPYLCILIAPASRYVFHSFPIEETQADKAFMHVLEGIVMGVVTEGMGMIEEAVRIRPAQLTTTDPLLANFLSPLLEGTRVSVAASSDKVVNADSDAKTKESPLIAIMDGVYADFFIDLTKANSKRKLPIGDNMSDEAAFKVKSRTASGKEKYIADPEKEKRKIPEKMMACKGCNQLKLRSQVKQCSLCNEVWYCGNECQASDWSKGHKNDCSRKNEGKKKGKGAGHVSEDSGDD--LGDQAAKDALDSFAIDLHK---GLGGGGAKKK 450
BLAST of mRNA_F-serratus_M_contig128.2070.1 vs. uniprot
Match: A0A6H5KRE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRE4_9PHAE) HSP 1 Score: 305 bits (781), Expect = 8.570e-96 Identity = 158/208 (75.96%), Postives = 178/208 (85.58%), Query Frame = 3
Query: 447 ADLERAAESVNAVADEQGMLATLRKEVGTACKCLTSGDWERP-KKQEEEPEGLTYAECLAAPFVKIPAKKWNALNQDSRLHVEIRSRLCPPNDKPPYICIVIAPSSRYIFHSFPVEETKADEAFMHVLEGIVMAVVTEGMGMVDEAVRIRPTQLTTTDPLLVKFLSPLLQGTRVSIAASSNKVVNVDPDAKTKESPLIAIMDGIFADF 1067
ADL++AAE VNAVA E GML L K VG+ C CLT P K QEEEPEGLTYAE LAAPF+KIP KK NA+ QDSRLHVEIR RL P+DK PY+CI+IAP+SRY+FHSFP+EET+AD+AFMHVLEGIVM VVTEGMGM++EAVRIRP QLTTTDPLL KFLSPLL+GTRVS+AASS+KVVN D DAKTKESPLIAIMDG++ADF
Sbjct: 6 ADLDKAAEEVNAVATEAGMLEALTKAVGSKCNCLTLFTPGNPLKPQEEEPEGLTYAESLAAPFLKIPVKKTNAVGQDSRLHVEIR-RLPAPHDKAPYLCILIAPASRYVFHSFPIEETQADKAFMHVLEGIVMGVVTEGMGMIEEAVRIRPAQLTTTDPLLAKFLSPLLEGTRVSVAASSDKVVNADSDAKTKESPLIAIMDGVYADF 212 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig128.2070.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig128.2070.1 >prot_F-serratus_M_contig128.2070.1 ID=prot_F-serratus_M_contig128.2070.1|Name=mRNA_F-serratus_M_contig128.2070.1|organism=Fucus serratus male|type=polypeptide|length=499bp MPPRRGQKMSNTSPASCRHGGPRATSHILECINIMVNHNEFGVTEEEFEEback to top mRNA from alignment at F-serratus_M_contig128:302565..317295- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig128.2070.1 ID=mRNA_F-serratus_M_contig128.2070.1|Name=mRNA_F-serratus_M_contig128.2070.1|organism=Fucus serratus male|type=mRNA|length=14731bp|location=Sequence derived from alignment at F-serratus_M_contig128:302565..317295- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig128:302565..317295- >mRNA_F-serratus_M_contig128.2070.1 ID=mRNA_F-serratus_M_contig128.2070.1|Name=mRNA_F-serratus_M_contig128.2070.1|organism=Fucus serratus male|type=CDS|length=2994bp|location=Sequence derived from alignment at F-serratus_M_contig128:302565..317295- (Fucus serratus male)back to top |