mRNA_F-serratus_M_contig93.20698.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig93.20698.1 vs. uniprot
Match: UPI00138FC94C (uncharacterized protein LOC116617085 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FC94C) HSP 1 Score: 65.9 bits (159), Expect = 1.080e-8 Identity = 39/83 (46.99%), Postives = 51/83 (61.45%), Query Frame = 1 Query: 4 LDGTDA-NAEVIGNNTMRIGQPSRLMAFDIKTAVQEWFFDSDPVDNNGLLIKVEDEDLLGRDLRFYSNAYSDSDYHARIHVIC 249 LDGTDA N + TM +PS + FD+ AV++W S N GL+++V+DE + GR LRF SNA DS +HA IHV C Sbjct: 147 LDGTDAENMPQSPSTTMFSYRPSGFVEFDVTRAVKDWAGGSP---NYGLVVRVKDESVDGRGLRFASNADPDSQHHAFIHVKC 226
BLAST of mRNA_F-serratus_M_contig93.20698.1 vs. uniprot
Match: A0A451CPM4_9GAMM (Disaggregatase related repeat-containing protein n=1 Tax=Candidatus Kentron sp. G TaxID=2126341 RepID=A0A451CPM4_9GAMM) HSP 1 Score: 57.0 bits (136), Expect = 5.680e-6 Identity = 34/83 (40.96%), Postives = 46/83 (55.42%), Query Frame = 1 Query: 4 LDGTDANAEVIGNNTM-RIGQPSRLMAFDIKTAVQEWFFDSDPVDNNGLLIKVEDEDLLGRDLRFYSNAYSDSDYHARIHVIC 249 LD DA A G T +PS M FD+ AV+ W ++ N GLL+ +E +GRD+RFYS YSD+D H + V+C Sbjct: 100 LDNIDAEATPQGIPTYYHSHRPSGYMEFDVTPAVKNW---AEGERNYGLLVWAMNEYEVGRDIRFYSREYSDTDKHPVLKVLC 179
BLAST of mRNA_F-serratus_M_contig93.20698.1 vs. uniprot
Match: UPI00138FC51C (uncharacterized protein LOC116617081 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FC51C) HSP 1 Score: 55.8 bits (133), Expect = 2.610e-5 Identity = 34/83 (40.96%), Postives = 48/83 (57.83%), Query Frame = 1 Query: 4 LDGTDANAEVIG-NNTMRIGQPSRLMAFDIKTAVQEWFFDSDPVDNNGLLIKVEDEDLLGRDLRFYSNAYSDSDYHARIHVIC 249 L+ DA A + TM +PS + FD+ AV++W S N G++++V++E + GR LRF SNA DS HA IHV C Sbjct: 145 LNNIDAEARPQSPSTTMFSFRPSGFVEFDVTRAVRDWARGSP---NYGVVVRVQNESVEGRGLRFASNADRDSKRHAYIHVKC 224 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig93.20698.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig93.20698.1 >prot_F-serratus_M_contig93.20698.1 ID=prot_F-serratus_M_contig93.20698.1|Name=mRNA_F-serratus_M_contig93.20698.1|organism=Fucus serratus male|type=polypeptide|length=69bp MRIGQPSRLMAFDIKTAVQEWFFDSDPVDNNGLLIKVEDEDLLGRDLRFYback to top mRNA from alignment at F-serratus_M_contig93:843721..845511- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig93.20698.1 ID=mRNA_F-serratus_M_contig93.20698.1|Name=mRNA_F-serratus_M_contig93.20698.1|organism=Fucus serratus male|type=mRNA|length=1791bp|location=Sequence derived from alignment at F-serratus_M_contig93:843721..845511- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig93:843721..845511- >mRNA_F-serratus_M_contig93.20698.1 ID=mRNA_F-serratus_M_contig93.20698.1|Name=mRNA_F-serratus_M_contig93.20698.1|organism=Fucus serratus male|type=CDS|length=414bp|location=Sequence derived from alignment at F-serratus_M_contig93:843721..845511- (Fucus serratus male)back to top |