prot_F-serratus_M_contig927.20654.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig927.20654.1
Unique Nameprot_F-serratus_M_contig927.20654.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length414
Homology
BLAST of mRNA_F-serratus_M_contig927.20654.1 vs. uniprot
Match: D8LBH3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBH3_ECTSI)

HSP 1 Score: 235 bits (600), Expect = 5.060e-71
Identity = 139/296 (46.96%), Postives = 176/296 (59.46%), Query Frame = 0
Query:    7 NYGTFDPVKRSPEEGDTASYTCDRGQE-----------GSKTEHRLLRDWEGRFGLRLRKDGVNVVISEVEDEVARARGLCEGYVVTHMDGRPVLGSLQNTVECFEQAGNCLILRVQSTGSNRTRLDSALVNPRDNVVHHTVRQGDAVEALAVLYGVTPQQIRVWNRKHFPIGESGALVVGHVITLHTSTVGHTRSPKKVVAEGRPEELSNSTARXXXXXXXXXXXXMLYVVREGDTLKTISTRLNVREQELRVLNRSVFPLGEPGALLPGQTLRIFAVEGEGLI-EDGNGWSTTE 290
            NYGTF        E D    T    Q                E+R+    +G FGLRL K G  VV+SE++D+VARARGLCEG VVTHMDG P+LGSL+   EC +QAG+ L LRVQS  SN +R        + +VV H VRQGD+VEALA  YGVT  ++R+WNRK+FP+GE G L  G V+TL  +T           A+ R     +STAR            MLY VREGD+LK+I  RL ++E E+R LNR VFP+GE G +LPGQTL +FA + + L+ E+G+G ST E
Sbjct:    9 NYGTFIASPGHGAEEDYGGNTASSYQRLLSAPAPAFSVHHDQEYRIALREDGMFGLRLTKHGGEVVLSEMDDDVARARGLCEGDVVTHMDGEPLLGSLKAAAECMDQAGDSLSLRVQSGHSN-SRTGDGPRKAKYHVVQHIVRQGDSVEALAEQYGVTADEVRIWNRKYFPVGEPGCLCPGQVLTLRDTTADQ--------AKDRNRASLDSTARRRKSEGDGARKRMLYQVREGDSLKSICARLKLKEGEVRGLNRGVFPVGEAGVVLPGQTLTVFAEDCDILVTEEGSGHSTEE 295          
BLAST of mRNA_F-serratus_M_contig927.20654.1 vs. uniprot
Match: A0A024GH79_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GH79_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 2.430e-11
Identity = 64/244 (26.23%), Postives = 108/244 (44.26%), Query Frame = 0
Query:  135 HTVRQGDAVEALAVLYGVTPQQIRVWNRKHFPIGESGALVVGHVITLHTSTVG------HTRSPKKVVAEGRP-------EELSNSTARXXXXXXXXXXXXMLYVVREGDTLKTISTRLNVREQELRVLNRSVFPLGEPGALLPGQTLRIFAVEGEGLIEDGNGWSTTEEECEQKLISNSTAXXXXXXXXXGRRRMLYVVREGDTLKTISTRFKVKEQEVRVLNRSVFPVGEPGALVPGQTLRI 365
            H VR GD +E++A  Y  T   IR+ NRKHFPIGE G L  G ++ ++    G      H+   +    +G         E  ++ +A              ++ ++ GDT+++I     +   +   +NR        G  L G+ +R+   EGE +I        +E     + I   T             R ++VV+EG+T + I+ ++ +   ++R  NRS FP G  GA++PG  L +
Sbjct:   75 HLVRHGDTLESIANFYHTTTHFIRMANRKHFPIGERGNLSPGLLLHIYNMDTGVDQQVLHSDQKQIYPVDGVSCYGDLPLEAFTDQSAAKYK----------VHTLKCGDTMESICADYKLTMIQFMEMNR--------GRFLKGKLVRLQ--EGESVIVPDR--EASERAYRYRHIGEITLT-----------RQIHVVKEGETPEDIAAKYHMTNDQLRAFNRSYFPKGYRGAILPGYKLVV 285          
BLAST of mRNA_F-serratus_M_contig927.20654.1 vs. uniprot
Match: A0A8K1CI12_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CI12_PYTOL)

HSP 1 Score: 62.4 bits (150), Expect = 3.920e-7
Identity = 45/144 (31.25%), Postives = 69/144 (47.92%), Query Frame = 0
Query:  224 LYVVREGDTLKTISTRLNVREQELRVLNRSVFPLGEPGALLPGQTLRIFAVEGEGLIEDGNGWSTTEEECEQKLISNSTAXXXXXXXXXGR--RRMLYVVREGDTLKTISTRFKVKEQEVRVLNRSVFPVGEPGALVPGQTLRI 365
            ++VVR G+TLK+I+T+ N RE+ +R  NR  FP GE G L PGQ L I  V   G +E            E+++ +N             R  +   + + + DT  +I   + +    +  +NR  FPVG    LV G+ L +
Sbjct:   92 MHVVRSGETLKSIATQYNTREEYIRQDNRQYFPAGERGILFPGQMLHIRYVN-IGQLEP-----------EEEVPANRKDLGVGGSEALTRFSKYKTHTIAKKDTFDSICEAYNITYARLLQINRGRFPVGARAELVVGEQLIV 223          
BLAST of mRNA_F-serratus_M_contig927.20654.1 vs. uniprot
Match: A0A1E7ICS9_9DELT (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A1E7ICS9_9DELT)

HSP 1 Score: 58.5 bits (140), Expect = 1.310e-5
Identity = 65/232 (28.02%), Postives = 98/232 (42.24%), Query Frame = 0
Query:  135 HTVRQGDAVEALAVLYGVTPQQIRVWNRKHFPIGESGALVVGHVITLHTSTVGHTRSPKKVVAEGRPEELSNSTARXXXXXXXXXXXXMLYVVREGDTLKTISTRLNVREQELRVLNRSVFPLGEPGALLPGQTLRIFAVEGEGLIEDGNGWSTTEEECEQKLISNSTAXXXXXXXXXGRRRMLYVVREGDTLKTISTRFKVKEQEVRVLNRSVFPVGEPGALVPGQTLRIF 366
            H V++GD + ALA  Y +    I   N+    I     L +G  + L     G TR P         +EL++S  R             +Y VR GD+L TI+TR  V E++LRV NR    LG    + PGQ L +           G   +T         ++  T            ++++Y+VR GDTL  I  +F+V+   +R+ N+    +     L PGQ L + 
Sbjct:  357 HQVKRGDTLRALANKYRIQVDDIVALNK----ISNPRTLQIGTNLILPLKE-GFTRLPV--------DELADSYVRSKRR---------IYTVRGGDSLWTIATRFGVTEKQLRVWNR----LGWSNLIRPGQKLAVSKA--------GQRTATK--------VARKTGPA---------KKVVYLVRPGDTLWGIGRQFEVETGMIRLWNQ----LSSGNILRPGQKLTLM 533          
BLAST of mRNA_F-serratus_M_contig927.20654.1 vs. uniprot
Match: Q3A2X4_SYNC1 (Lytic transglycosylase, SLT, LysM, LysM, LysM and LysM domain-containing n=2 Tax=Syntrophotalea carbinolica TaxID=19 RepID=Q3A2X4_SYNC1)

HSP 1 Score: 58.5 bits (140), Expect = 1.420e-5
Identity = 69/262 (26.34%), Postives = 101/262 (38.55%), Query Frame = 0
Query:  127 NPRDNVVHHTVRQGDAVEALAVLYGVTPQQIRVWNRKHFPIGESGALVVGHVITLHTSTVGHTRSPKKVVAEGRPEELSNSTARXXXXXXXXXXXXMLYVVREGDTLKTISTRLNVREQELRVLNRSVFPLGEPGALLPGQTLRIFAVEGEGLIEDG--------NGWS-------TTEEECEQKLISNSTAXXXXXXXXXGR-------RRMLYVVREGDTLKTISTRFKVKEQEVRVLNRSVFPVGEPGALVPGQTLRIF 366
            N R N  H+ VR GD + ALAV YG+  + I + NR    I    AL +G  + L        R   K       ++   S  R              Y VR GD+L  I+ R NV   +L   N     +   G L PG+ L++       L+  G        N W+       T  + C    +S ++                   R+++Y VR GD+L +IS RF +   ++  LN     +G    L PGQ L + 
Sbjct:  379 NRRANYRHYRVRSGDTLGALAVRYGIRSRDIMLLNR----IKNPRALRIGSDLILPLR-----RDYSKAPVAALGDDYVRSKTRS-------------YKVRNGDSLWRIARRFNVSTAQLAAWNG----MAVNGVLRPGKVLKVAGGASRKLVLTGTYRVRSGDNLWTIARKRNVTVSQLCAWNGLSKNSLLKPGMVLKLAAAGGSVKSRKIIYKVRSGDSLWSISRRFDLAIGKICSLNN----LGRKHVLQPGQKLTLL 610          
BLAST of mRNA_F-serratus_M_contig927.20654.1 vs. uniprot
Match: UPI00138ADE6A (LysM peptidoglycan-binding domain-containing protein n=1 Tax=Desulfuromonas sp. TF TaxID=1232410 RepID=UPI00138ADE6A)

HSP 1 Score: 56.2 bits (134), Expect = 3.250e-5
Identity = 66/242 (27.27%), Postives = 93/242 (38.43%), Query Frame = 0
Query:  129 RDNVVHHTVRQGDAVEALAVLYGVTPQQIRVWNRKHFPIGESGALVVGHVITLHTSTVGHTRSPKKVVAEGRPEELSNSTARXXXXXXXXXXXXMLYVVREGDTLKTISTRLNVREQELRVLNRSVFPLGEPGALLPGQTLRIFAVEGEGLIEDGNGWSTTEEECEQKLISNSTAXXXXXXXXXGRRRMLYVVREGDTLKTISTRFKVKEQEVRVLNRSVFPVGEPGALVPGQTLRIFAVEG 370
            R N   H V+QGD + ALA  + +    I   N     I    AL +G  + L          P K      P+ L +   R              Y VR GD+L +IS R  V E+ELRV NR    LG    + PGQ L +               ST   +  Q     S             R+++Y+VR GDTL  I  +F V  +++   N+    + +   L PG  L +   +G
Sbjct:   90 RANYQRHKVKQGDTLLALAQRHDIRVADIVALNG----ISNPRALRIGSDLIL----------PLKKGYNRPPDGLKDDYVRTRR---------QTYTVRRGDSLWSISRRFGVTEKELRVWNR----LGWNNVIRPGQKLMVS--------------STGSAKPSQNSAKTSNV-----------RKIVYLVRSGDTLWDIGRQFNVATRQIMDWNK----LSKDHILRPGDKLTLLVGDG 275          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig927.20654.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LBH3_ECTSI5.060e-7146.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A024GH79_9STRA2.430e-1126.23Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A8K1CI12_PYTOL3.920e-731.25Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1E7ICS9_9DELT1.310e-528.02Uncharacterized protein n=2 Tax=Bacteria TaxID=2 R... [more]
Q3A2X4_SYNC11.420e-526.34Lytic transglycosylase, SLT, LysM, LysM, LysM and ... [more]
UPI00138ADE6A3.250e-527.27LysM peptidoglycan-binding domain-containing prote... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018392LysM domainSMARTSM00257LysM_2coord: 224..272
e-value: 2.2E-5
score: 33.9
coord: 134..182
e-value: 0.017
score: 24.3
coord: 318..366
e-value: 6.4E-5
score: 32.4
IPR018392LysM domainPFAMPF01476LysMcoord: 319..365
e-value: 3.5E-7
score: 30.2
coord: 225..271
e-value: 1.4E-7
score: 31.5
coord: 135..179
e-value: 9.9E-4
score: 19.1
IPR018392LysM domainPROSITEPS51782LYSMcoord: 223..271
score: 10.842
IPR018392LysM domainPROSITEPS51782LYSMcoord: 133..181
score: 10.085
IPR018392LysM domainPROSITEPS51782LYSMcoord: 317..365
score: 10.919
IPR036779LysM domain superfamilyGENE3D3.10.350.10coord: 317..366
e-value: 3.4E-8
score: 35.4
IPR036779LysM domain superfamilyGENE3D3.10.350.10coord: 208..276
e-value: 6.0E-8
score: 34.1
coord: 122..190
e-value: 3.3E-6
score: 28.5
NoneNo IPR availableGENE3D2.30.42.10coord: 24..117
e-value: 9.2E-6
score: 27.5
NoneNo IPR availablePANTHERPTHR21666PEPTIDASE-RELATEDcoord: 187..273
NoneNo IPR availablePANTHERPTHR21666:SF263MUREIN HYDROLASE ACTIVATOR NLPDcoord: 187..273
NoneNo IPR availableSUPERFAMILY54106LysM domaincoord: 132..182
NoneNo IPR availableSUPERFAMILY54106LysM domaincoord: 317..365
NoneNo IPR availableSUPERFAMILY54106LysM domaincoord: 223..271
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 39..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig927contigF-serratus_M_contig927:87713..95078 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig927.20654.1mRNA_F-serratus_M_contig927.20654.1Fucus serratus malemRNAF-serratus_M_contig927 86838..95249 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig927.20654.1 ID=prot_F-serratus_M_contig927.20654.1|Name=mRNA_F-serratus_M_contig927.20654.1|organism=Fucus serratus male|type=polypeptide|length=414bp
MLSVCNNYGTFDPVKRSPEEGDTASYTCDRGQEGSKTEHRLLRDWEGRFG
LRLRKDGVNVVISEVEDEVARARGLCEGYVVTHMDGRPVLGSLQNTVECF
EQAGNCLILRVQSTGSNRTRLDSALVNPRDNVVHHTVRQGDAVEALAVLY
GVTPQQIRVWNRKHFPIGESGALVVGHVITLHTSTVGHTRSPKKVVAEGR
PEELSNSTARRRKSETDDRRRRMLYVVREGDTLKTISTRLNVREQELRVL
NRSVFPLGEPGALLPGQTLRIFAVEGEGLIEDGNGWSTTEEECEQKLISN
STARRRKSETDDGRRRMLYVVREGDTLKTISTRFKVKEQEVRVLNRSVFP
VGEPGALVPGQTLRIFAVEGEGLIEDGNGWSTTEEECEQELIKGFASRKK
MGMWIRPTAVVGY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018392LysM_dom
IPR036779LysM_dom_sf
IPR036034PDZ_sf