mRNA_F-serratus_M_contig921.20623.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig921.20623.1 vs. uniprot
Match: A0A6H5KJ22_9PHAE (BED-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ22_9PHAE) HSP 1 Score: 204 bits (519), Expect = 2.480e-58 Identity = 129/230 (56.09%), Postives = 145/230 (63.04%), Query Frame = 3
Query: 18 MGKKKKHSAVKNEKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETISVVPNAKEGRESVDFEIYGINGIPDDALAERAAKKARTSETS-----TGDGSSMGQDVPVANVSTPVQQPVAPAQGQAVPQQFSTQQPQVPGVMY-GGPPFAGMGYXXXXXXXXX-GMMGPPPGFNPMQXXXXXXXXXXX-QIPPPMFGGPLGPNGQMLGRPI 683
MGKKKK K+E EAWCYYCDRVFEHEEVLI HQK KH C C KKLSTAGGLVVH QVH+ETIS VPNAKEGR+SVD EIYGINGIP +A AERAAKKAR + T+ + P +TP QQP QG +P QF+ QP +PG+M+ GG P GMG+ GMMGP XXXX +PP M GGP GPNGQMLG P+
Sbjct: 1 MGKKKKQKVAKDETEAWCYYCDRVFEHEEVLILHQKTKHLSCMFCKKKLSTAGGLVVHAQQVHRETISEVPNAKEGRKSVDLEIYGINGIPAEAWAERAAKKARIAGTNGXXXXXXXXXXXXPETPKVETATPGQQPAXXGQG--MPPQFNGHQP-MPGMMFPGGAPGPGMGFHPMGQPGFHPGMMGPXXXXXXXXXXXXPPPMHGGPNMPPHMLGGPRGPNGQMLGGPM 227
BLAST of mRNA_F-serratus_M_contig921.20623.1 vs. uniprot
Match: A0A835ZE93_9STRA (BED-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE93_9STRA) HSP 1 Score: 159 bits (401), Expect = 3.010e-39 Identity = 73/111 (65.77%), Postives = 91/111 (81.98%), Query Frame = 3
Query: 18 MGKKKKHSAVKNEKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETISVVPNAKEGRESVDFEIYGINGIPDDALAERAAKKARTSETSTG 350
MGKKKK + +++ WC+YCDRVF+HEEVLIQHQKAKHFKC CNKKL+TAGGLVVH QVHKET++ V NAKEGRES ++EI+G+ GIP +A+AERAA+KA + + G
Sbjct: 1 MGKKKKQKVEEEKEQPWCFYCDRVFDHEEVLIQHQKAKHFKCLVCNKKLTTAGGLVVHCQQVHKETVTQVQNAKEGRESAEYEIFGMEGIPAEAIAERAARKAAEAAGTAG 111
BLAST of mRNA_F-serratus_M_contig921.20623.1 vs. uniprot
Match: A0A834FYY0_RHOSS (Uncharacterized protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834FYY0_RHOSS) HSP 1 Score: 140 bits (354), Expect = 9.100e-37 Identity = 65/96 (67.71%), Postives = 77/96 (80.21%), Query Frame = 3
Query: 18 MGKKKKHSAVKNEKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETISVVPNAKEGRESVDFEIYGINGIPDDALA 305
MGKKKK +A+K E WCYYCDR F+ E++L+QHQKAKHFKC C+KKLSTAGG+V+H QVHKE++ VPNAK GRES D EIYG+ GIP D LA
Sbjct: 1 MGKKKKRAALK---EVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMVIHVLQVHKESVPKVPNAKPGRESTDIEIYGMQGIPPDVLA 93
BLAST of mRNA_F-serratus_M_contig921.20623.1 vs. uniprot
Match: A0A7S3YKR3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YKR3_HETAK) HSP 1 Score: 140 bits (354), Expect = 1.840e-36 Identity = 64/101 (63.37%), Postives = 82/101 (81.19%), Query Frame = 3
Query: 18 MGKKKKHSAVKNEKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETISVVPNAKEGRESVDFEIYGINGIPDDALAERAAK 320
MGKKKK +AV+ E++ WC+YC+R+FE E+VLIQHQK+KHFKC CNKKLSTAGG+VVH QVHKETI V NA + R++ D+EIYG+ G+P +A+ E AK
Sbjct: 1 MGKKKKKTAVREEEKPWCFYCERIFEDEKVLIQHQKSKHFKCHVCNKKLSTAGGMVVHCLQVHKETIKNVHNAIKERDTTDYEIYGMEGVPQEAVDEHRAK 101
BLAST of mRNA_F-serratus_M_contig921.20623.1 vs. uniprot
Match: A0A397IUI9_9GLOM (BED-type domain-containing protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397IUI9_9GLOM) HSP 1 Score: 141 bits (355), Expect = 2.630e-34 Identity = 73/118 (61.86%), Postives = 87/118 (73.73%), Query Frame = 3
Query: 18 MGKKKKHSAVKNEKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETISVVPNAKEGRESVDFEIYGINGIPD-DALAE-------RAAKKARTSETST 347
MGKKK ++ WC+YC+R FE E+VLIQHQKAKHFKCP CNKKL+TAGG+VVH +QVHKETI VPNA +GRESVD EI+G+ GIP DA+A + +KK RT ETST
Sbjct: 1 MGKKKNKKVIR----PWCWYCERDFEDEKVLIQHQKAKHFKCPHCNKKLNTAGGMVVHVAQVHKETIDTVPNAIKGRESVDVEIFGMEGIPQQDAMAHAQSLENNQPSKKMRTEETST 114
BLAST of mRNA_F-serratus_M_contig921.20623.1 vs. uniprot
Match: T1E1I5_SILLA (C2H2-type zinc finger protein (Fragment) n=1 Tax=Silene latifolia TaxID=37657 RepID=T1E1I5_SILLA) HSP 1 Score: 132 bits (333), Expect = 7.050e-34 Identity = 63/96 (65.62%), Postives = 77/96 (80.21%), Query Frame = 3
Query: 18 MGKKKKHSAVKNEKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETISVVPNAKEGRESVDFEIYGINGIPDDALA 305
MG+KKK N+K +CYYCDR F+ E++L+QHQKAKHFKC CNKKLSTAGG+V+H QVHKE+++ VPNAKEGRES + EIYG+ GIP D LA
Sbjct: 1 MGRKKKRQ---NDK-VFCYYCDREFDDEKILVQHQKAKHFKCHACNKKLSTAGGMVIHVLQVHKESVTKVPNAKEGRESTEIEIYGMQGIPADVLA 92
BLAST of mRNA_F-serratus_M_contig921.20623.1 vs. uniprot
Match: A0A1Q3BMZ7_CEPFO (BED-type domain-containing protein (Fragment) n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3BMZ7_CEPFO) HSP 1 Score: 134 bits (337), Expect = 7.130e-34 Identity = 62/96 (64.58%), Postives = 73/96 (76.04%), Query Frame = 3
Query: 18 MGKKKKHSAVKNEKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETISVVPNAKEGRESVDFEIYGINGIPDDALA 305
MGKKKK K WCYYCDR F+ E++L+QHQKAKHFKC C+KKLSTAGG+ +H QVHKE+++ VPNAK GRES D EIYG+ GIP D LA
Sbjct: 1 MGKKKKRVPSK----VWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKESVTKVPNAKSGRESTDIEIYGMQGIPPDVLA 92
BLAST of mRNA_F-serratus_M_contig921.20623.1 vs. uniprot
Match: A0A2J6JQ82_LACSA (BED-type domain-containing protein n=2 Tax=Lactuca sativa TaxID=4236 RepID=A0A2J6JQ82_LACSA) HSP 1 Score: 139 bits (351), Expect = 1.830e-33 Identity = 66/111 (59.46%), Postives = 79/111 (71.17%), Query Frame = 3
Query: 18 MGKKKKHSAVKNEKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETISVVPNAKEGRESVDFEIYGINGIPDDALAERAAKKARTSETSTG 350
MGKKKK + + WCYYCDR F+ E++L+QHQKAKHFKC C+KKLSTAGG+ +H QVHKET+S VPNAKEGRES D EIYG+ GIP D LA + + T G
Sbjct: 1 MGKKKKRVSS----DVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKETVSKVPNAKEGRESTDIEIYGMQGIPPDVLAAHYGDEDNDNPTKVG 107
BLAST of mRNA_F-serratus_M_contig921.20623.1 vs. uniprot
Match: A0A2G3A9J0_CAPAN (Protein SUPPRESSOR OF FRI 4 n=4 Tax=Capsicum TaxID=4071 RepID=A0A2G3A9J0_CAPAN) HSP 1 Score: 139 bits (351), Expect = 2.430e-33 Identity = 64/96 (66.67%), Postives = 75/96 (78.12%), Query Frame = 3
Query: 18 MGKKKKHSAVKNEKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETISVVPNAKEGRESVDFEIYGINGIPDDALA 305
MGKKKK S+ WCYYCDR F+ E++L+QHQKAKHFKC C+KKLSTAGG+ +H QVHKET+S VPNAKEGRES D E+YG+ GIP D LA
Sbjct: 1 MGKKKKRSSSDK---VWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKETVSKVPNAKEGRESTDIEVYGMQGIPPDVLA 93
BLAST of mRNA_F-serratus_M_contig921.20623.1 vs. uniprot
Match: UPI0007F0076B (protein SUPPRESSOR OF FRI 4 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F0076B) HSP 1 Score: 139 bits (351), Expect = 2.570e-33 Identity = 65/96 (67.71%), Postives = 77/96 (80.21%), Query Frame = 3
Query: 18 MGKKKKHSAVKNEKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETISVVPNAKEGRESVDFEIYGINGIPDDALA 305
MGKKKK +A + WCYYCDR F+ E++L+QHQKAKHFKC C+KKLSTAGG+ +H QVHKET+S VPNAKEGRES D EIYG+ GIP DA+A
Sbjct: 1 MGKKKKRAAAAVS-DIWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMSIHVLQVHKETVSKVPNAKEGRESTDIEIYGMQGIPADAMA 95 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig921.20623.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig921.20623.1 >prot_F-serratus_M_contig921.20623.1 ID=prot_F-serratus_M_contig921.20623.1|Name=mRNA_F-serratus_M_contig921.20623.1|organism=Fucus serratus male|type=polypeptide|length=383bp MGKKKKHSAVKNEKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSback to top mRNA from alignment at F-serratus_M_contig921:150828..153253- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig921.20623.1 ID=mRNA_F-serratus_M_contig921.20623.1|Name=mRNA_F-serratus_M_contig921.20623.1|organism=Fucus serratus male|type=mRNA|length=2426bp|location=Sequence derived from alignment at F-serratus_M_contig921:150828..153253- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig921:150828..153253- >mRNA_F-serratus_M_contig921.20623.1 ID=mRNA_F-serratus_M_contig921.20623.1|Name=mRNA_F-serratus_M_contig921.20623.1|organism=Fucus serratus male|type=CDS|length=2298bp|location=Sequence derived from alignment at F-serratus_M_contig921:150828..153253- (Fucus serratus male)back to top |