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Homology
BLAST of mRNA_F-serratus_M_contig92.20597.1 vs. uniprot
Match: D8LTL3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTL3_ECTSI) HSP 1 Score: 209 bits (533), Expect = 1.450e-63 Identity = 139/196 (70.92%), Postives = 154/196 (78.57%), Query Frame = 2
Query: 53 MSSLQDAWGHFQGGVKSILNQWTALRLAVENNWGGGDSERKAALLEEELITLFRTKKEIYKDEVENFLSDFLDDNFSTYAEDDSAAEVGTILVEMFAQCGRLDFTLANTVRAEEQRLLERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXM---------EEDMEAEPSAGP-DEDGWETVGSKKGGKGRKR 610
MSSLQDAWG+FQGGVKS LNQWTALRLAVENNWGGGDSERKAALLEE ++ +F+TKKEIYKDEVENFL+DFLDDNFSTYAEDDS A+V +LVEMF+QCGRLD+TLAN VRAEEQRLL + XXXXXXXXXXXXXXXXXXXXXX E +E E +AG D DGW TV KK G+G +R
Sbjct: 1 MSSLQDAWGNFQGGVKSALNQWTALRLAVENNWGGGDSERKAALLEEGVMNMFKTKKEIYKDEVENFLADFLDDNFSTYAEDDSPAQVAMMLVEMFSQCGRLDYTLANAVRAEEQRLLAKEAASASPGSGKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMGGEGGVEGEGAAGGVDADGWATVTGKKAGRGGRR 196
BLAST of mRNA_F-serratus_M_contig92.20597.1 vs. uniprot
Match: A0A836CB10_9STRA (Pre-rRNA-processing protein TSR2-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB10_9STRA) HSP 1 Score: 140 bits (354), Expect = 9.520e-37 Identity = 64/115 (55.65%), Postives = 91/115 (79.13%), Query Frame = 2
Query: 53 MSSLQDAWGHFQGGVKSILNQWTALRLAVENNWGGGDSERKAALLEEELITLFRTKKEIYKDEVENFLSDFLDDNFSTYAEDDSAAEVGTILVEMFAQCGRLDFTLANTVRAEEQ 397
M+SL +AW F+ GV S+L QWTAL+LAV+NNWGGG+S++KA +E EL+ +FRTKK++Y+DEVE++L+ +LDD+F TYAEDD + +L++MFA+CG +DFTL A+EQ
Sbjct: 1 MASLNEAWELFKQGVGSVLRQWTALQLAVDNNWGGGNSQQKALAMEAELVEMFRTKKQVYRDEVEDYLNAYLDDHFGTYAEDDR--RIAVVLLDMFAKCGAMDFTLVRNTLAQEQ 113
BLAST of mRNA_F-serratus_M_contig92.20597.1 vs. uniprot
Match: A0A7S2V1Z9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Z9_9STRA) HSP 1 Score: 119 bits (297), Expect = 2.270e-29 Identity = 54/110 (49.09%), Postives = 79/110 (71.82%), Query Frame = 2
Query: 68 DAWGHFQGGVKSILNQWTALRLAVENNWGGGDSERKAALLEEELITLFRTKKEIYKDEVENFLSDFLDDNFSTYAEDDSAAEVGTILVEMFAQCGRLDFTLANTVRAEEQ 397
DAW F G+ S++ QW+ALR+A+ENNWGGGDS+ KA+L+ ++LI LF+ K ++VE+FL D ++D FST EDDS +EV IL++M+ +CG+LDF+ V E+
Sbjct: 14 DAWSFFLEGINSLMRQWSALRMAIENNWGGGDSQAKASLMTQQLIPLFQGKSPPQLEDVEDFLVDSMEDYFSTLIEDDSTSEVAQILLQMYHECGKLDFSTVQRVTGAEK 123
BLAST of mRNA_F-serratus_M_contig92.20597.1 vs. uniprot
Match: A0A7R9YGN4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YGN4_9STRA) HSP 1 Score: 102 bits (253), Expect = 8.260e-22 Identity = 53/116 (45.69%), Postives = 72/116 (62.07%), Query Frame = 2
Query: 65 QDAWGHFQGGVKSILNQWTALRLAVENNWGGGDSERKAALLEEELITLFRTKKEIYKDEVENFLSDFLDDNFSTYAEDDSAAEVGTILVEMFAQCGRLDFTLANTVRAEEQRLLER 412
+ WG F G++ +L WTAL LAVENNWGGGDS +KA L E L+ +FR ++IY D VE+ L +D++F T +D S EV +LV+M+ CG DF+ N +RL ER
Sbjct: 9 EQRWGAFVSGLQGVLQSWTALNLAVENNWGGGDSHKKAQELFEALLEVFRRGRDIYADVVEDVLLVRMDESFHTRCDDGSIEEVSRLLVQMYHDCGNGDFSKVNETL---ERLRER 121
BLAST of mRNA_F-serratus_M_contig92.20597.1 vs. uniprot
Match: A0A7S0QX22_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QX22_9CHLO) HSP 1 Score: 88.2 bits (217), Expect = 1.210e-16 Identity = 44/100 (44.00%), Postives = 65/100 (65.00%), Query Frame = 2
Query: 80 HFQGGVKSILNQWTALRLAVENNWGGGDSERKAALLEEELITLFRTKK-EIYKDEVENFLSDFLDDNFSTYAEDDSAAEVGTILVEMFAQCGRLDFTLAN 376
HF+ GVK+IL +WTA RLAV+N WGG SE KA +E++++ F K IY DE+E+ L + + +F+T EDDS EV L ++ +C R ++ LA+
Sbjct: 47 HFEKGVKAILKKWTAFRLAVDNGWGGNSSEEKADQVEDDILLWFYNGKGTIYADELEDMLMEAMRVDFNTECEDDSCKEVSLQLTNLYGECARGNYALAD 146
BLAST of mRNA_F-serratus_M_contig92.20597.1 vs. uniprot
Match: A0A0P1A789_PLAHL (Uncharacterized conserved protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A789_PLAHL) HSP 1 Score: 86.3 bits (212), Expect = 3.100e-16 Identity = 36/116 (31.03%), Postives = 67/116 (57.76%), Query Frame = 2
Query: 59 SLQDAWGHFQGGVKSILNQWTALRLAVENNWGGGDSERKAALLEEELITLFRTKKEIYKDEVENFLSDFLDDNFSTYAEDDSAAEVGTILVEMFAQCGRLDFTLANTVRAEEQRLL 406
+++ W +F+ VK +L +WTALR+A+E WGGGD+ RK +L EE++ +F+ K +Y D + + + +++ F ED S E+ T+L + +C + + + + Q L+
Sbjct: 20 AIKSPWDYFEYSVKLVLARWTALRMAIEGEWGGGDTRRKYEILLEEILNVFKYNKTVYADAMSDNIGGYVESEFGLICEDGSVEEISTLLTVLADECKKAQYDRVKAMHEQVQSLI 135
BLAST of mRNA_F-serratus_M_contig92.20597.1 vs. uniprot
Match: A0A484DY11_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DY11_BRELC) HSP 1 Score: 86.3 bits (212), Expect = 3.520e-16 Identity = 37/115 (32.17%), Postives = 68/115 (59.13%), Query Frame = 2
Query: 59 SLQDAWGHFQGGVKSILNQWTALRLAVENNWGGGDSERKAALLEEELITLFRTKKEIYKDEVENFLSDFLDDNFSTYAEDDSAAEVGTILVEMFAQCGRLDFTLANTVRAEEQRL 403
+L+ W +F+ VK +L +WTALR+A+E WGGGD+ RK +L EE++ +F+ + +Y D + + ++ +++ F ED S E+ T+L + +C ++ T+ + Q L
Sbjct: 23 TLKSPWDYFEYSVKLVLARWTALRMAIEGEWGGGDTRRKYEILLEEILNVFKYHRTVYADAMSDNITGYVEAEFGLICEDGSVEEIATLLTVLSDECKNAQYSRVKTMHEQVQSL 137
BLAST of mRNA_F-serratus_M_contig92.20597.1 vs. uniprot
Match: K3X674_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X674_GLOUD) HSP 1 Score: 85.1 bits (209), Expect = 9.030e-16 Identity = 37/105 (35.24%), Postives = 65/105 (61.90%), Query Frame = 2
Query: 50 EMSSLQDAWGHFQGGVKSILNQWTALRLAVENNWGGGDSERKAALLEEELITLFRTKKEIYKDEVENFLSDFLDDNFSTYAEDDSAAEVGTILVEMFAQCGRLDF 364
+M +++ W +F+ VK L++WTALR A+E WGGGD RK +L EE++ +F+ K +Y D++ ++D+++ F ED S E+ +LV + +C + D+
Sbjct: 20 QMGTIKSPWEYFEYAVKLALSRWTALRFAIEGEWGGGDMRRKYEILLEEILHVFKYNKTVYPDDMVINIADYVESEFGLLCEDGSVEELSELLVVLAEECKKGDY 124
BLAST of mRNA_F-serratus_M_contig92.20597.1 vs. uniprot
Match: W4H961_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H961_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 9.870e-16 Identity = 42/127 (33.07%), Postives = 76/127 (59.84%), Query Frame = 2
Query: 20 STGCNAVVVTEMSSLQDAWGHFQGGVKSILNQWTALRLAVENNWGGGDSERKAALLEEELITLFRTKKEIYKDEVENFLSDFLDDNFSTYAEDDSAAEVGTILVEMFAQCGRLDFTLANTVRAEEQR 400
ST N++V + + W +F+ VK + +WTALR+A+E WGGGD RK +L ++++ F+ +K + D++ + ++++ F+ EDDS EV +L+ + A+C + DF+ VRA E++
Sbjct: 2 STILNSIVAAHAKTPGNQWEYFEFSVKLTMARWTALRMAMEGEWGGGDMRRKFEILLDDVLNWFKYQKSVEYDDLAAGIEEYIESEFALVCEDDSVDEVAKLLLTLAAECKQGDFS---RVRALEEQ 125
BLAST of mRNA_F-serratus_M_contig92.20597.1 vs. uniprot
Match: Q4UC95_THEAN (Uncharacterized protein n=2 Tax=Theileria annulata TaxID=5874 RepID=Q4UC95_THEAN) HSP 1 Score: 83.6 bits (205), Expect = 1.060e-15 Identity = 45/103 (43.69%), Postives = 59/103 (57.28%), Query Frame = 2
Query: 83 FQGGVKSILNQWTALRLAVENNWGGGDSERKAALLEEELITLFRTK-----KEIYKDEVENFLSDFLDDNFSTYAEDDSAAEVGTILVEMFAQCGRLDFTLAN 376
F K +L+ WTAL LAVENNWGG DSE K LL +I KEIY D++E+ + D +D+ F+ ED S E+ +ILV++ C DFT AN
Sbjct: 8 FSTACKKVLDCWTALNLAVENNWGGDDSELKKELLVRNIIEFCLESNEFMNKEIYSDQIEDIIVDKIDEYFNVTLEDGSEVEIASILVKLHFTCSNNDFTYAN 110
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 210.3 |
| Seed ortholog evalue | 7.7e-52 |
| Seed eggNOG ortholog | 2880.D8LTL3 |
| Preferred name | TSR2 |
| KEGG ko | ko:K14800 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000462,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0030490,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 |
| EggNOG free text desc. | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
| EggNOG OGs | KOG4032@1,KOG4032@2759 |
| Ec32 ortholog description | Pre-rRNA-processing protein TSR2 |
| Ec32 ortholog | Ec-28_003680.1 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko03009 |
| Exons | 4 |
| Model size | 1055 |
| Cds size | 561 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622932664.9229257-UTR-F-serratus_M_contig92:609756..609808 | 1622932664.9229257-UTR-F-serratus_M_contig92:609756..609808 | Fucus serratus male | UTR | F-serratus_M_contig92 609757..609808 + |
| 1690964411.6741333-UTR-F-serratus_M_contig92:609756..609808 | 1690964411.6741333-UTR-F-serratus_M_contig92:609756..609808 | Fucus serratus male | UTR | F-serratus_M_contig92 609757..609808 + |
| 1622932665.0083086-UTR-F-serratus_M_contig92:621679..622121 | 1622932665.0083086-UTR-F-serratus_M_contig92:621679..622121 | Fucus serratus male | UTR | F-serratus_M_contig92 621680..622121 + |
| 1690964411.7387352-UTR-F-serratus_M_contig92:621679..622121 | 1690964411.7387352-UTR-F-serratus_M_contig92:621679..622121 | Fucus serratus male | UTR | F-serratus_M_contig92 621680..622121 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622932664.9418561-CDS-F-serratus_M_contig92:609808..609895 | 1622932664.9418561-CDS-F-serratus_M_contig92:609808..609895 | Fucus serratus male | CDS | F-serratus_M_contig92 609809..609895 + |
| 1690964411.6880686-CDS-F-serratus_M_contig92:609808..609895 | 1690964411.6880686-CDS-F-serratus_M_contig92:609808..609895 | Fucus serratus male | CDS | F-serratus_M_contig92 609809..609895 + |
| 1622932664.9637823-CDS-F-serratus_M_contig92:619278..619380 | 1622932664.9637823-CDS-F-serratus_M_contig92:619278..619380 | Fucus serratus male | CDS | F-serratus_M_contig92 619279..619380 + |
| 1690964411.7011588-CDS-F-serratus_M_contig92:619278..619380 | 1690964411.7011588-CDS-F-serratus_M_contig92:619278..619380 | Fucus serratus male | CDS | F-serratus_M_contig92 619279..619380 + |
| 1622932664.9790208-CDS-F-serratus_M_contig92:620931..621003 | 1622932664.9790208-CDS-F-serratus_M_contig92:620931..621003 | Fucus serratus male | CDS | F-serratus_M_contig92 620932..621003 + |
| 1690964411.7121072-CDS-F-serratus_M_contig92:620931..621003 | 1690964411.7121072-CDS-F-serratus_M_contig92:620931..621003 | Fucus serratus male | CDS | F-serratus_M_contig92 620932..621003 + |
| 1622932664.9939597-CDS-F-serratus_M_contig92:621379..621679 | 1622932664.9939597-CDS-F-serratus_M_contig92:621379..621679 | Fucus serratus male | CDS | F-serratus_M_contig92 621380..621679 + |
| 1690964411.726031-CDS-F-serratus_M_contig92:621379..621679 | 1690964411.726031-CDS-F-serratus_M_contig92:621379..621679 | Fucus serratus male | CDS | F-serratus_M_contig92 621380..621679 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig92.20597.1 >prot_F-serratus_M_contig92.20597.1 ID=prot_F-serratus_M_contig92.20597.1|Name=mRNA_F-serratus_M_contig92.20597.1|organism=Fucus serratus male|type=polypeptide|length=187bp
MSSLQDAWGHFQGGVKSILNQWTALRLAVENNWGGGDSERKAALLEEELI TLFRTKKEIYKDEVENFLSDFLDDNFSTYAEDDSAAEVGTILVEMFAQCG RLDFTLANTVRAEEQRLLERKAAAPGGGAKPDAVSSSMSVKEEDEDDSSS SDDDMEEDMEAEPSAGPDEDGWETVGSKKGGKGRKR* back to topmRNA from alignment at F-serratus_M_contig92:609757..622121+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig92.20597.1 ID=mRNA_F-serratus_M_contig92.20597.1|Name=mRNA_F-serratus_M_contig92.20597.1|organism=Fucus serratus male|type=mRNA|length=12365bp|location=Sequence derived from alignment at F-serratus_M_contig92:609757..622121+ (Fucus serratus male) TGTAACCTGGTGATCATCTTCCACAGGTTGTAACGCTGTCGTTGTCACGG
AGATGTCTTCTCTTCAGGATGCATGGGGTCATTTTCAAGGCGGTGTAAAA
TCTATCTTAAATCAATGGACAGCTCTCAGGCTAGCGGTGGTGAGTGGAAG
GCGTCGGTACATTTTTCATGTCGATACTTTCGTCTAATGTGCAAACTTGC
GCACTACATTGATGTCTTTATCTTGTGCTCGAACTACTCGGGACTGGAGA
CTTATCCAATGGCAGTTGACCGTGAACGTTTTAGACCAGACCGTCGAGAA
AGCGGCAGGAAGGGGAGGAATCCACGAGTAGGAACCACAGTAAGCCTAGA
CATGGAAAATGAGTGGGCTGGCGCGAGACGGGGGAGCCGACCCTATCTCG
CGAGGCGAGCCAATGCGCGTACGGGGACAGGGGGGAAAAGTATACCGGTA
TTCCCTTTTTCCGGCTAAAACCACTGTTGATAAAAGATTGGCAGCCATAA
AAAAGCTGATCCCCAATCCCCAGTCTGCTTTATGTGGTGATAGCCACGCT
CACGCACTCACACACACACCTTGATACTTTGTGCTATGCCTGGGTGCGAT
TCCAAAATTTCCGTTACTATTTGTACGGTGGGTCAGAAAAGGCTCCACGC
TAACAGCGGGCGCTAGATTCCCCGGCCCTCGATTTTGAGCGTCGTGCATA
TATCAGGGGGGAAATCCAAGCCCTTCATTAGCTACTGTACACCATTAGGC
TTGCACGTCCATTAATACTGCTGTACCAGGTAGTCTATTAATAGTCCTCC
TCCAGTTAGGGCCCAATCTTATGGGTCAGAAAAAAAGTGATCGAAAAACG
TTTTTTTCTGATAACGACGACCACAACAGAAAAACACGTTTTCGGATCAC
TTTTTTTCGGAGGAAGGGCTTTCGGAGGAGCAGCTGATCAGAAAATCTGG
AAAAAACGGAGGGAAAAGTTATCAGAAAAATAGTTAGTAGCAATACGAAG
GCGTCCCTCACACGGATGGACCCAAAAGTTCTAACATGTCTTCAAACACA
GACCTCATGTAGGTTGGAGACAGGCATGGATGTGTTGCTGTGGCGGCCTC
GGTGGCAGAATATACACATCGCAAGCTGAGAATCAAAAATATCAATCAGT
TGGCACTCGTTCTAAAGTTGCTCGACGAGGAAGATGGAATCTTGTCCCGA
GAACAAATCTGTAGCTTTTGCAACGTGCGTCGTGTAGCAGTTTACGTCCT
CGGTACATATTATTAGATGCCGTTGGAGGCCGCTTGCACGGTACTGTTTG
CATGGCACGCTGCGGCCTTCGAGCTGCGTTCGTGTGGTTGTGCAAGCCCG
AAATGATTGAAGACCACATGCTGTACCACGCCACGGTTGTAAGTAGGTGC
ACAGAATAATGTGCCTACCGGCAGCAGCAGCATTCTTTCGCTATGCATTG
TGGGCGAAGGCGTGCCGGACGGACGGACTCAAAAGTTCAAACCTGCCTTC
AAACACAGACCTCGTGTAGGTCGATGCCAGGCATGGATGGCTGTGTCGCA
AAGGTGACGGCCGCCGTGGCAGCATCTCGGCGTTGCAAGAAGATAATAAA
ACATACGTATCAATCAGTTGGTGCTCGTTCTAGGGTTGCTCCGCGTAGAA
AATGCAATCGAGTCCCGAGAACTCATTTATCTGTTGTAGCCTTCGCAACG
CGCGTCGTACAGCAGTCACGTGCTCGGTACCGATTAGATGTTGTTGGAGG
CCGCTTGCACTGACAGTTCTGTTTCCATGGCACGTTGCGGCCTTAGAGCT
GCATTTTTGTGGTTGTGCAAGTCCGAAATGATCGAAGTCTACGTGCTGTA
CAACGCCATGGTTGGAAGTAGGCGCACAAGCAAGGCAATGAGCCTACCCG
CAGCAGTCCTTCGCGATGTGTTGTGGGTGAAAGCATTATCTAAAACATAC
AGCAGACTGTGCACATTGAACAGACTCTCCAGCAGAGCACAACGTGCAGA
CGCCGAGATTCCTCGGCTTTGAATACATTTGTGCTACTTACAACCGTGGC
ATAGCACAGGACATGATCTTCAATAATCGTCTGGAGCCTGCACAACCACA
CGATGCAGATGGCCGACCGCACCGTACCATGCAAACATAACAGTACGGAA
GAGCATCCGACACAAAAAAATGGGGCCATAAACTCCTAGACGTTAGAACT
GTCAGCATCAATATTTTCCGATAATGTTTTTTCTGTCCCATAAATCACGT
CGAATAGGTGTTCCCATCAGAAATTTTCTTGTCAGAAAAAAAAGGTTTTC
GGTCACTTTTTTTCTGACCCATAAGATTGGTCCTTAGGACCATTCTAGAT
GACAACTTCATTTTTCCACAGAGAACGTTCCAAAGTTTGGAGCGTTTGGA
AAGTCGTTGATTATGTCAGCAATTGAGGTAAAGGTTTGGATAAGATGAAC
CCGGCTCTAGTTAGTAGGGAGTTTGCGGGAGGGAACTCCGTGACCGATTT
TTGTCGAGGCATTTCCACGGAAAAGGCCACGAAATTCGTGCATTATTGTG
ATTGCAAAAATTGCGGAGGAATTTGCCGGCCCACCCCCAAAGCCCTCGAT
AGGAACGCCTTTAAATTGCCTTTAAACGCCTGGGTTGATGTACTTCAGGA
CTTCAGGTACGATACTTTCAACATACCCTGCTTTATACCAATAAGTGGGT
GAGGAAAGAGAGACGCACATCAATTGGTCCATGGTGATGCAAAGACAGCA
CCCGCTACTGGAACTACCTTGAGGACTACTGGCCCTGTGCCGGCGGACTC
TCGGCAGTGAACGCCATCAGTACGCAATTGCGTGACCAAATAAACACGGG
GCTGGCATGATGACGTCTAGTGGTTTCATACATATAGTGGGTGTGGGAAA
GTAAGGCGTATATTAATTGGTCCATGGTGACCTGCTAAGGCAGCACTCGT
TCGGAACTACCTTGAGGTTTACTGGCCCTGTGCCGGCGGACTCTCGGCAG
TGAACGTCATCAGTACGCAATTGCGTGACCCGATAAACTCGGGACTTACC
CAATGGCGTATGGCGGTTTAATATAAATTTATGGACGCCGCCGCGGAACT
CGGGAGGAATCCTGTAAGTAAGCACCAGATTCAGCCTGAGTATGAAGATG
AGCAGACTGACGCGGGACGGGACTGCCGAAACCATCTCGCGAGACCAAAT
TCTTAGGCGCGAACGCGGACAGGGGAATATTATTTTCCCTGTTCAGCTGA
CCACGAGCAGGATTGGCAACCTTACCAGGTTGATCCATACCCTTGCTAAA
TGTGTGACCATACATACATAAGTGGACGCCGACGTGGAAATCGGGAGGAA
TCCCGTAAGTAAGCAACAGATTCGGCCTGAGCATGGAGTATGGGCAGGCT
GATGCAGGACGGGACGACCGAACCCCTCTCGCGAAACAAAATTCTCAGGT
ACGAAGGGCGAGCGGGTTCATTTTCCCGGTTCAGCTGACCACGAGCAGGA
TTGGCCACCTTACCCGGTTGATCCATATGGCGGTTTCATAAATGGACGCC
GCCGCGGAACTCGGGAGGAATCCCGGAAGTAAGCACCAGATTCAGCCTGA
GTATGGAGATGAGCAGGCTGACGCGGGACGGGACGGCTGAACCCGTCTCG
CGAGACCAAATTGTCAGGCACACACGGGGACAGGGGAATATTCATTTTCC
CTATTCAGCTGACCACGAGCAAGATTGGCAACCTTACCCGATTGACCCAT
ACTTTGCTATATGTAATGGCTACACATACATACATACATACTCTGCTATA
TGTGATGACCACACAGGTACATGTTCTCCGATTTTTTTTTATCCCCACGA
AATTCCTAGTTCCGTAGAAAGGCCATTTCCAGTGAAAAAATCGACGGAAA
TGAGAACGATCTCCGTCGGAAAGTTTTCGGCCACGGAAATCGGCCAAAGA
ATTTTACCTTTGCTAACACCCTATTAATAGATGGTACACCCTATTAATAC
CTCGGGGTACTTTCAAAATATTTTTGGTTCATGGGGACCACAGCCAGGAA
CACATGCAAAGACACGAAAGATCCCGAGACCGCTGCAGTAGATATTAGTA
GATCCTGGGCGATTCCGAATACAAGCGATCAAGCGATGAACCGCATCACC
TACTTTACGAGCAGCGCTCGTCTCGCTCCAGCGTAAGCATAAGCCTAAGA
AAAGCGACTAACTTCTTGAAGTTTTGTTTATTCATGTGATATTTCTTCCG
AAAGGCCCCTCCCTTCTCAGACTTGCGTGGTCGTCCTAACAAAGCCGTTC
GAGTGTGATCGCAGTCCTCCTTACCTCCGGCGGCTAAATTGTTGCCACGG
CGCCGACGACGCTCGTCGTGACCAAGAAACCGAGAGTAAAGCTGTGACTG
CCGTGCGCATTGCCAATTCAGGATCTTGGCGCCGTCGAGAAGCCCGCCCT
CTCTCCTTGCTAGGAAGCCTCGTCCTGCACAGCTTACTTGAGCTGACTTA
TCCTTGTTTTCCGTCGCCATGGCCCAGACAGGGCTGTGAACCCCACAGGG
GTTGCCAACAACGCAAGAGTGTTTTCTACAATTTTAAAAAAATTCCAAAC
TTTCCTAAAACTGAAAATGGGCGAGCATCGACATGTTTTCCACAACTTAA
AAAAAAAATCTGAACTTTCCTAAAATTGGAAATGGACGAGTATCGACCTC
GAGGTGAGCGTTCATTTCCAAATTTTGAAAAGTTTGGAAAGTTGTGGGGA
AAACGCCTATGTTGTTGCAACCCCTGTGGGGTTTACAGCCCTGTCCGTGG
ACCATAGCCATGGAAAACAAGGATGTTTCAACTCAAGCCAGCTGTGCAGG
ATAATACTTTCTTAGCGCCAGAGGCAAAAAGAGCGGGCTTCTCGACGGTG
CCGAGACCCTAAATTGACTATACGCACGGCAGTCACAGCTTTACTGTTGG
TCGCGACGTGATCCGGCCGCCGGAGGCGTGGAGGACTGTAATCACACTCG
AGCGGTTTTGTTGGGACGACCACATAGACAAACAAACCTTGAAAAAGTTA
GTTGCGCTCCTTACGCTGGAGCGAGGCGAGGCGAGCGTTATGTAGGTGCG
ATTGATGGCCTCTTCTCAAAATCGCTCCAAGATCTACTGACATCTATTGC
GGCGGTCTCCGAATCTCCATTGTTTCTGGTGTTCCTGAGTCTTAAGGGCC
AAAAAGGTTTTCACAGCGTTCCAAGGCGTTATCATACTATCTAGAGCGGG
ATTCTGCTTTTCCGAGCCTTCACCTTAATTGCTGACATAATCCATCCAGA
ATAACTTTCCCAAAATTTGGAAAAATAAAGCGCTTTCTACACAGGCCCAT
AGTTAGTCAGTACTTGGTCAGTGTATCAGTACGAGTATTTGGTATACTGT
AGTACTGAACTGCAGAGGTTTTTCTAGGCCGTTCTGTACCTGTTACGTTA
ACAGAGTACAAGTAATTCTCCAGCCAGATTCCCAGGCGCGAACGAGGACA
TTTGATGCCCACTTCAGCTGACCACTGACCGCTTGATGCCCAGTTTGCTA
AACGTAGGGCGCAACTCGCTACCGATTGGTGTGTTTCTGCATATTTACGG
TTTCTCGCGTTTCGATAGGCTTACAGTCAAGTTCGAAACACGCCAGTGAC
AGGTTTCCGTTTTTCAATGACGGGCTCGCGCACATATCGAGTTCTTGACG
TTAGTGAAAGTTTGCAAAGTTTGCAAAATCGTGTTTATCGTGTTGTGGAG
GGTTCTTTCATTCATATTACCGTATCAGTGAAGTGGAGTGTTTGGCCTAT
ACATCTCTCTCTATAGAGGTATGTAATATTATCCTCAACCTTAATCTTTA
GATCTGAAGCGCTCAGAGCGCAGAGTTCAACCATTGTTCTTTCCATCCCC
TTCTCAAGGCAAGACGTTTGGGGCGAAATTCAGCCTGAAAACACGATTAA
ATCGTTTTTTCTTCCGTCTTCGCCTACCGGGTCGCATTAATCTCTCGAGC
CACCCCTGCAAGTTACGCGCCGAGGTTAGCTCTTACGCGTGAGCTTCAGA
TGTGGAGAGCTTGCTTTATCTTTACAAAAGTTCTGCATCTTTCAGAGGTA
CCCCTGCATCACCATCGAACAAGTTATGCATATTAGCTCAGAGATCCGCA
GCAGCAGTTGTTGCTGTTGTTTAAAGAAAAATGCGAACGCGCCTAAACCT
TCTGATCCGCCCCCGGTAGGGGGAAAAAAAACAAAACGTTTAGGTGGGCT
CAAAGGCTGCAGATACAAAACCTCTTCATGGCATTTAAACGGGTTCCCCG
ATGCATATAACATTGAGTCAACAATATAATGTCGGGGAGAAGCCCACCGT
TATACTGTACACTTACATTAATCGCCATGCAGGGACACCAAAAAAAAAAG
AAAAAACAGACAAAACAGACAAAACAGTACATCATCAAACAGTAATACAG
ACGAATACAGTACATCATTCAGTAATAAAGACGAATACAATACATCATTA
AAAGAGGACAAGAGGACCATGATGATGCGGAATCTTCATATCCAAGTACA
CAACAGCATTCACCTGGAAGTAGATGAAGAGCAGTAGGGGATCACACAAG
GAGGTAAGCGGCAAACGGAGAGAACTGGGTTCCTCGCTCCAACTTGTCAG
GGCTACGACTCACTTATGCTCCTCATGCAGAACTTAGCTATGGCCTCGCG
AAGACCAGAAACACAAAGGAAGAGCACTTGTTTGTGAAAAATGAACAAGC
GGGCCTTCAAACCAACTCGTGTGACCCCCCGTTCGATTGTCTTCACATAA
AAAAACGGCAACCACGTATATTACACCGTTGTGACCTCTATCCAGCAGTA
CCTTCTCTTTCTTACTCTTCAAGGCAAAGAAACGAATTTCCGTGGTCACA
GGCTACCCCAAACTAAGGTACACAAAGAAAATAAGATAAAATAAAAAGAC
CCAGAGAAAGTTCCAACACTTGCCAAAAAATAAAATAGTGGTTCCTAAAA
ATAACAAGTTCAGAAAAATACATCAATCACCATGTAGGGACACCAAAACA
GAAGCAGACTTAGTTACTACTACACAGTAAAAATCTGAACATTGGCTGTA
GGGACAAAAACTCTACATGTTGCGTACTGTTTGTGTTCCCGGGGTCGCTG
TACCATTCACAGCGTACGTCTACCCCACGTGCCTGCATGTCCATTTCTGT
GGGCAATAGGATCGACGGAATATTTCTCTTTTGTATCGAAACGCATCGTT
GCGTCCTGTTTGTCGTGACGCCATCGTCGTGTTATGTTGCCCCTATAACG
TTCAAAGCGAACTCTACTTGAGGTGTCTGCGTGTGCATTATTTTTAGGGA
GAGCATCAACGAGGAGTCGTCCTTACAAACCGACACCCTCCCGCACCGCA
CAACTTCATACATCATCCGCGGGAGACGACGCCAACCATTTTATCCCGTA
CTATCTGACCACAACTACTCGACCATGTACACATTTCCACCGAATACCAT
CTTCCGGTTCACGGTTTGCCCTCCGTGTTGAGACGCGTGCCCCTTGGTAA
CGGTTCTTCACGTTCACACTCTCTATACCATCACCAATCACAACCAAAGC
ATTTCCCACAACTGAGGACGGGGGGTCGATAGGCCCCAACGTCCGGAACT
CTTGTATATATATATAATATTCGAGGATATAGAGCTAGAGAGATATATTT
CACATACTCCTCGCTCCGACACTCATTTGGAATCTTTTGAGTAAACTTTA
AAAGAAGCAGCAGCAAATGGCCCTGTCTCTACTTGTTTTTCGGATAGAGT
AGCTCCTCATGATCCAGCATGTTCGCCAGGCATGGCAACGTAACGCCGTG
GCACTCTGTATACCCAAGCTTGCCTACAAGCAACAATTTTGATTGCGTCC
CGCCTGTGTCCTAGAGTTCTTTGAAGCCTGTTCGTAGTTACCTCATCTAG
GCCTCCCCAGCCATGCACAGTACAAGTCTATTTCCAGCGCCCGATTTTAG
ATTCGCCGGAAAATGGGGGCTCGTTTTTCATCCAGCGAGCGACCTAGTTC
GGCTATTTAAAAATGGCCTTGTTAAGAGTGACCGATTCCATCCCCATACA
AAGTCTTGCTGCGTACTGAAGACACGACCGCCGAAAAGTTGCGATTTCAT
TTTTCGACGACCTCCACCTGTCATCCTAATACAAGTTGGTCTTTGGTTGA
TCGTCATGAGAGGAAATTTCTATTCGTTTAAAAAATGCGCGAAGACATGT
ACTGTAACATGTAAGATGTAAGATGTAAGCCTTCCGAGCATCCACACTAT
CGGAGGAAAAAATGCCTCAAACATTTATAATATAATACAATAATAGGTTA
TAATACTATTACTACTTCCTCTTCTTGGCCGCGATCTCTTTAATAGTTTA
ATAGTTTAATAGTTTAATAGGTAGCCATGAATGGGGCTATTAAAGACTTC
GAAGGCTTGTTATACTAATGCGGAGTAATAACGCTAAATCCTCTGTGCGA
CTGACAACGCACAACAAAAGCATCAAGTTTAGCGTAAAAAAAATACTTGG
TACAGTACCTGGTAGAACAGCATAATATTAACATTGTACCTTAGACAGGA
CAAGACAACACAGCAGGCAGGCAGTATTTTCATCAAACGGAGGTGTTCCA
TTGATTCGGCAGCATGTCATCAATACCCTTGTATGACTTGCCTTTCTAAG
TACTACCAGGTACTAGGTATGTGAAGATTGTTCGATTCGTGCCCACAATA
GCAATACTATAATAGTACAATACTATAATAGAATAGACGAGTGGGACGGG
AATCGCCGTTTTCCCCGGTGCTCCGTGATGCTGATGCTGATGCTGATGCT
GATGCTGATGCTGATGCTGATGCTGATGCTGTCTGGTGCGGCTTTCTTAC
TTCGGTTCCAAGGTGGTGGTGGTGGTTGGGGGGGGGGTATGTAGGCTGAA
ACTCGTTATCTTGGTTTGAAATGTTGAAATGAGCTTTTGCCAGTAATGCT
AGAGGAGGAGTCTTCACTCAAGGCCAACACTACGGTCCCAAGGCCACTAT
CAACACTATAGCTATAGCTATAGCAGGATAGCAGTGATGGATGGATCCCG
TTGAAAGCTCGTACTTGTTTTGTGGGTGTTGCTGCGGATACCCGGTACTC
TTCTGTTTCCTGAGGTCACTCACTGTACCTCTTTTTGGCCATTTTTTAGT
ACTATTACTGTTACTATTAATAATTACTATTATTAATAATAATATAACGT
ATGGTAGGGTAGGGTAGGCATTACTTTACTACAGTTGTATTACCACCGAA
CCACTTTTAATAGTCTATGTGTATGTGCATGTGTTTGTGTATCAATAAAG
GTATCGATATAGAGCCTAGTTATTAAGGTATAATAGTTGCAAGCCTTGTT
TCCATTCTCTCATTGTTTTTCCGTGAATACGCCATACTGCTGCACGTCTA
ATCGACTGTTCTGTTTCTATTGCTTATGATGTGCTTATGATGTGCTTATG
ATGTGCTTATGATGTGCTACAGGAAAATAACTGGGGTGGGGGGGACTCCG
AGCGCAAGGCGGCGCTGCTGGAGGAAGAATTAATAACCTTGTTCAGGACG
AAAAAAGAGATTTACAAGGACGAGGTTCGTGCTACAAGCTACAAGCAGTA
CTTGTAGACCTCTACTATCTTGCGCTGCTGTTCCACACCCAGCCAAGTCC
GTTCATGTATGTATGGTCACACATATAGCAAGAGTATGGATCAACCTGGT
AAGGTTGCCAATCCTGCGCGTGGTCAGCTGAACAGGGGAAAGAATATTCC
CCTGCCAACGTTCGTGCCTGAGAATTTGGTCTCGCGAGACGGTTTCGGCA
GTCCCGTCCCGCGTCAGCCTGCACATCTCCATACTCAGGCAGAATGTAGG
CTCACTAATAATCTTGCGTTGTATTATTATTACTATTATTACCATTGTTA
CTATAATAGTATTGATATAATCGTGCGCTGTTTTACATGGTACAAAACTG
GGAGAGTGTTCCCGTTAATTGGCGCGTCTTGGGAAAAGGGGTATACACTA
TACACTATACACTATAGCTATAATAGATTGGATTGGATTGGATTGGATTG
GATTGGATTGGATTTATTCTGCGAGACCCATTTTCGGACAAAATTGACAA
AGACCGTGTTCGTCCACAATTCAAGTATTCCGTCGCCCCGAAGCCAGGCG
GTAACCCAATCCGAAACCGAAAGCCAAGACAAAAACGTGGCGTGTACTGT
ATCAATCGTTGTAGATGCATCATAGCGTTGATTATTGTATCATTGATGTA
TCATAGCACCCTTATCATTCTATTTTGGGGGGAAAGATTCATGTGTTTCT
CGCGCAATCAAAAGTAAAATCCTTAAATATATTTTTACCGGAACTCCAAT
ACTCCAATACTCGGAACTTCAATATACAATCCAAGTGTAGTGCCAAGGAA
AAAACGGGAAATTTCTACGAGGTGCTGGTTCTTCCGGTCAAATAGTGAAA
AAAAACTATTAATACCGTAACAAACTATTAATAGCGTAAAATACGCTCAA
AATCGGGACATTGTCGTTGGTTCGACACGTTCAGTGTTTGGTATTGATTG
CGTAACATGGAGCTATCTCGTTTGTGCCATTGGTGTTTAATGGGTGCACT
TAATGAACTTGATATTGTATATTCAGTGTTCAACTGTCCACTATTAATAG
TACTATTAATAGCGCGCGTCCCCTTACAACTCAACTCAATACAATACAAT
ACAACTCAACTCAATTCTGTACCTTGTAGGTGCTTGGTATATGATACCGG
TATTCGGTAGAGAAAATTCAGAGGCAGTCCTAATCCGCGCGTTACCCTTA
TGTTTGTACTAATAATAGTTGATTGTTGATGGTTTGAAGTAGTTTAGTTG
ATCAACATTCAAAAAAAAAATCCAGGGTGCCTCTTACAGCCGGGCGTACT
CTACAGAGCTATGACATGAGGGAGTACGTCGCGGGCGGCACCACCCCATA
CCGCGTCTTGAGCTAAAGTAATACGACTGAACATCCCACATTGCGCATCA
TGAGCTGAAGCAAAGTAATCCAGTAATCCATTGATGCACTTTTAGTATTA
CGCCATGATCTTGTGACACTTATTCTCGCTGCTCTATTTTGTATACTATT
TTGTACACTATATTTGATATTTTAGGTCGAAAATTTCTTGTCGGATTTCC
TGGATGACAACTTCAGCACCTACGCAGAAGATGACAGTGCTGCCGAGGTG
AGGTGAAGTCAAGTGAGGTAGTCAAAGCTCTTTCTTCGTCGGCGGCAGTC
CCCAGCTAGTGCCGTGTCGTGCCCACGGTCGATCGCTGGGAGTTCGTCTC
CGAGAGTTTTCCGGAGGCTTTTTCCTACTGCTTTCCCCTTGAATCTCGGG
CGGATCGTTCGTCCCTCGAAGTCACCACCTGATATTTAAATTCAACACTC
TAAAATTCCACACTATTATACTAGTCATCAGTCTACGCAGCGTCTAAAAG
TGTCGACACAGTTTCTTTTGGACACAATAATGTGAATACTCGAAACTTTG
AGATGCAATCAGACTTTTCTTTAAAACACTACCGTACAATAATAATACTA
CAACCACGCGCCCCCCCGCATAGGTTGGAACGATACTCGTGGAGATGTTC
GCCCAGTGTGGCCGCCTTGATTTCACCCTCGCGAACACTGTGAGAGCGGA
GGAACAGCGCCTCCTCGAGCGCAAAGCCGCCGCACCTGGGGGAGGCGCGA
AACCGGATGCGGTATCGAGTAGCATGAGTGTCAAGGAAGAAGACGAAGAC
GACAGCAGCAGCAGCGACGATGATATGGAAGAGGATATGGAGGCGGAACC
AAGTGCAGGGCCTGATGAGGATGGATGGGAAACTGTTGGTAGCAAAAAGG
GGGGCAAGGGGCGCAAGAGATGAGATTTATCAGACAAATAGGGTGGTGAC
TAATGTGCAGATGGCTCTTGTGTCTCGCACGGAAGGGACTCCCATAGATC
ACCAAGGTCCTCGAGCGTCCGAACTGTCTTGTAGTCCATGCCTCTTGTAC
ATCGGTTGCAGATTATACCGTACTAAAGTCTGTGCGCGTCGACCTCTGTA
TATACTGTGTCTGTGTTGTGGGTCTTGTGATCACGTTGAGCAGACGTGGC
ATCAGCCGTATAAGGGCTCCTTGTGGTCAGCTGAGCAGGGATGATGAATG
GATAGGGAAAATTCCCTGTCCCCGTTTGCGTCTGGCAGTTTGGTTTCGCG
AGATAGGTTCGGCAGTCCCGTTCCGCGTCAGCCCGCTCATTCTCTACACT
CATCACTCGGGCTGAATCTGGTGCTTACTCACGGAATCCCTCCCGCTTTC
CATAACGGTGTCCAT back to topCoding sequence (CDS) from alignment at F-serratus_M_contig92:609757..622121+ >mRNA_F-serratus_M_contig92.20597.1 ID=mRNA_F-serratus_M_contig92.20597.1|Name=mRNA_F-serratus_M_contig92.20597.1|organism=Fucus serratus male|type=CDS|length=1122bp|location=Sequence derived from alignment at F-serratus_M_contig92:609757..622121+ (Fucus serratus male) ATGTCTTCTCTTCAGGATGCATGGGGTCATTTTCAAGGCGGTGTAAAATC TATCTTAAATCAATGGACAGCTCTCAGGCTAGCGGTGATGTCTTCTCTTC AGGATGCATGGGGTCATTTTCAAGGCGGTGTAAAATCTATCTTAAATCAA TGGACAGCTCTCAGGCTAGCGGTGGAAAATAACTGGGGTGGGGGGGACTC CGAGCGCAAGGCGGCGCTGCTGGAGGAAGAATTAATAACCTTGTTCAGGA CGAAAAAAGAGATTTACAAGGACGAGGAAAATAACTGGGGTGGGGGGGAC TCCGAGCGCAAGGCGGCGCTGCTGGAGGAAGAATTAATAACCTTGTTCAG GACGAAAAAAGAGATTTACAAGGACGAGGTCGAAAATTTCTTGTCGGATT TCCTGGATGACAACTTCAGCACCTACGCAGAAGATGACAGTGCTGCCGAG GTCGAAAATTTCTTGTCGGATTTCCTGGATGACAACTTCAGCACCTACGC AGAAGATGACAGTGCTGCCGAGGTTGGAACGATACTCGTGGAGATGTTCG CCCAGTGTGGCCGCCTTGATTTCACCCTCGCGAACACTGTGAGAGCGGAG GAACAGCGCCTCCTCGAGCGCAAAGCCGCCGCACCTGGGGGAGGCGCGAA ACCGGATGCGGTATCGAGTAGCATGAGTGTCAAGGAAGAAGACGAAGACG ACAGCAGCAGCAGCGACGATGATATGGAAGAGGATATGGAGGCGGAACCA AGTGCAGGGCCTGATGAGGATGGATGGGAAACTGTTGGTAGCAAAAAGGG GGGCAAGGGGCGCAAGAGATGAGTTGGAACGATACTCGTGGAGATGTTCG CCCAGTGTGGCCGCCTTGATTTCACCCTCGCGAACACTGTGAGAGCGGAG GAACAGCGCCTCCTCGAGCGCAAAGCCGCCGCACCTGGGGGAGGCGCGAA ACCGGATGCGGTATCGAGTAGCATGAGTGTCAAGGAAGAAGACGAAGACG ACAGCAGCAGCAGCGACGATGATATGGAAGAGGATATGGAGGCGGAACCA AGTGCAGGGCCTGATGAGGATGGATGGGAAACTGTTGGTAGCAAAAAGGG GGGCAAGGGGCGCAAGAGATGA back to top
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