mRNA_F-serratus_M_contig92.20593.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig92.20593.1 vs. uniprot
Match: D8LTK9_ECTSI (Ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTK9_ECTSI) HSP 1 Score: 254 bits (648), Expect = 8.550e-68 Identity = 267/465 (57.42%), Postives = 321/465 (69.03%), Query Frame = 1
Query: 1 GANPNDKHPDGETALHVAAEKGLIKIIRNLILYGGSIDAVKASGMTPLMCAVSGGHKYSTSLLCDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHVGQRNWRELTPFGEARMNNRTDLANFLSKSFVRVINPLPSDSDRKPGST----YNDAY-----------WDEEMEEQAKDWEQAWDEESQRFYFFNRVTCETSFTIPFRATARRVEELRAGAEVPYRRKVAAVMAPDLMSLAEYREARREARLELNELMLRSSSATAIQSGWRGWLARNAASCLRRERRLLLVVQRTARRILKRHRRKRLELFTASCIVLQRSVRGYQTRCKYRRRLTRFRRMCTEGTLNNLATEVYRGHLYGRKVARKRRAQRAALDWGSTEWKHRRLHGFTPTET 1350
G++P++ PDG ALHV+A KG +++ +L+ +G +D SG+TPL AVS H +T LLCDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +GQRNW+E TPFGEARMNN + +A FLS SFVR+ PS ST +DA WD+EME++ + WE WD++ QRFY+ N T ETS+T PF+ +A RVEELR GAEV Y RKVA V L+ L++YREA +E + EL+ LR +A IQS WR +AR A+ R+ERR V+ R RR L R RRKRL ++C++LQ+ VRG R ++R +R+ TLN L T VYRGHLYGR+ AR+ RAQR A WG +EW+ R P T
Sbjct: 76 GSDPHETGPDGTVALHVSAHKGQTEVLWSLLQHGARVDVADVSGLTPLAYAVSNDHGDATGLLCDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYDVRIGQRNWQEYTPFGEARMNNHSQVAEFLSGSFVRLGGKGPSLGGNNGASTTIAELDDAQXXXQGGNEARGWDKEMEDKVQGWETEWDQDKQRFYYVNAETGETSYTAPFKISADRVEELREGAEVEYLRKVAPVNGESLLGLSDYREAFQEEKTELDTHKLRHQAAVVIQSCWRARMARIEANRRRKERRCASVINRQMRRFLGRCRRKRLGQVMSACLMLQKIVRGCMARRRHREGEAEMKRLRDANTLNRLVTRVYRGHLYGRRPARQLRAQREASWWGPSEWEAARHDAGDPLRT 540
BLAST of mRNA_F-serratus_M_contig92.20593.1 vs. uniprot
Match: A0A1E1XH39_9ACAR (Acyl-CoA-binding domain-containing protein 6 (Fragment) n=1 Tax=Amblyomma aureolatum TaxID=187763 RepID=A0A1E1XH39_9ACAR) HSP 1 Score: 59.3 bits (142), Expect = 4.820e-6 Identity = 30/65 (46.15%), Postives = 44/65 (67.69%), Query Frame = 1
Query: 4 ANP---NDKHPDGETALHVAAEKGLIKIIRNLILYGGSIDAVKASGMTPLMCAVSGGHKYSTSLL 189
ANP N + P+G TALH+AA++G + I+R+L+ YG IDA+ +G TPL+ AV+ G+ LL
Sbjct: 122 ANPELANARSPEGLTALHIAADRGHMDIVRSLLKYGAEIDAMDDNGDTPLLVAVAAGNSEVVDLL 186 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig92.20593.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig92.20593.1 >prot_F-serratus_M_contig92.20593.1 ID=prot_F-serratus_M_contig92.20593.1|Name=mRNA_F-serratus_M_contig92.20593.1|organism=Fucus serratus male|type=polypeptide|length=441bp MTPLMCAVSGGHKYSTSLLCDYGANLDLVDMSGRTALHVAAQGGRADVLQback to top mRNA from alignment at F-serratus_M_contig92:530528..540167- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig92.20593.1 ID=mRNA_F-serratus_M_contig92.20593.1|Name=mRNA_F-serratus_M_contig92.20593.1|organism=Fucus serratus male|type=mRNA|length=9640bp|location=Sequence derived from alignment at F-serratus_M_contig92:530528..540167- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig92:530528..540167- >mRNA_F-serratus_M_contig92.20593.1 ID=mRNA_F-serratus_M_contig92.20593.1|Name=mRNA_F-serratus_M_contig92.20593.1|organism=Fucus serratus male|type=CDS|length=2646bp|location=Sequence derived from alignment at F-serratus_M_contig92:530528..540167- (Fucus serratus male)back to top |