prot_F-serratus_M_contig1278.2048.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1278.2048.1
Unique Nameprot_F-serratus_M_contig1278.2048.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length391
Homology
BLAST of mRNA_F-serratus_M_contig1278.2048.1 vs. uniprot
Match: A0A6S7H8C9_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7H8C9_PARCT)

HSP 1 Score: 135 bits (340), Expect = 5.680e-31
Identity = 115/402 (28.61%), Postives = 190/402 (47.26%), Query Frame = 0
Query:    1 MKHSSLGGNNYVVISVYDCTRFKVVKFVKNKSDTTAALLSLVADYITLQKLSIKCIRTDNGGEF-EVEFQRELDRRSITHEYTPPDTPQYNGVAERALGFLRK--KAIILMEELD-----DAMFYACDVTNKSVTTSANGGKSPHELWFGKFPTADHLRLFGAVGYARQ-SVREHKMAPKGEKCVFMGIPRNFPTGTVSVLLVRSRNNVERQAVQWIDGTKKTGSDGTGTEAASGSANLERPTLPALHKLTIDA-NITPILSSRTRTRRPHTGVEGEALH-CFLPAIEAEEENGEEDVLA--CDDGGQMAMQPTLDVPEPRNRRQAMELHEWDEWRKAEETEMLGMVENCVYNQVARPKDMLVIGTKMLYKRIIGQDGKVEKHKCRLVAQGFWQVEDVHYTE 389
            M   S+GG+ Y++    D TR+  V F+KNKS+        V+       L +K +RTDNGGE+   +F +    + I H+Y+ P TPQ NGV+ER    L +  K++I    +      +A+  A  + N+S TTS N  K+P+E+WF K P   +L++FG+V +    S    K+ P+  K VF+G P N  T    +  + S+N V  + V + +   K       T+      ++    L   H+   DA +  P+ +        +    GE+    F+  +E  E   +         D   +    T +  EP++  +A+      +W++A + E   ++ N  +  V  P+   VIG+K + K     DG V++HK RLVAQG+ Q   ++Y E
Sbjct:   48 MNTDSIGGSKYILTFTDDYTRYVTVYFLKNKSEVYEKFQEYVSMVENFTGLKVKTLRTDNGGEYVSNDFSKYCVNKGIVHQYSNPYTPQQNGVSERLNRTLMESAKSMIFYANMPINFWAEAVNTAVYLHNRSPTTSLNM-KTPYEVWFSKKPDVSNLKVFGSVCFIHTPSNLRRKLDPRSRKAVFIGYPLN--TKGYKLYDIESKNFVRSKDVGFYE--NKFHDFKVVTKELIIREDVPEEKLSVDHEQHHDAEDQVPVPTVPDIEDEENLPAVGESYEESFMKQVENLETKRQRKAPKKFSPDECNITESLTAENEEPQSISEALNGANASKWKQALKEEYNSLISNETWELVPPPEGCNVIGSKWVMKIKRDADGNVDRHKARLVAQGYSQTPGINYEE 444          
BLAST of mRNA_F-serratus_M_contig1278.2048.1 vs. uniprot
Match: A0A6S7GFZ2_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GFZ2_PARCT)

HSP 1 Score: 134 bits (337), Expect = 1.410e-30
Identity = 113/402 (28.11%), Postives = 189/402 (47.01%), Query Frame = 0
Query:    1 MKHSSLGGNNYVVISVYDCTRFKVVKFVKNKSDTTAALLSLVADYITLQKLSIKCIRTDNGGEF-EVEFQRELDRRSITHEYTPPDTPQYNGVAERALGFLRKKAIILMEELD-------DAMFYACDVTNKSVTTSANGGKSPHELWFGKFPTADHLRLFGAVGYAR-QSVREHKMAPKGEKCVFMGIPRNFPTGTVSVLLVRSRNNVERQAVQWIDGTKKTGSDGTGTEAASGSANLERPTLPALHKLTIDA-NITPILSSRTRTRRPHTGVEGEALH-CFLPAIEAEEENGEEDVLA--CDDGGQMAMQPTLDVPEPRNRRQAMELHEWDEWRKAEETEMLGMVENCVYNQVARPKDMLVIGTKMLYKRIIGQDGKVEKHKCRLVAQGFWQVEDVHYTE 389
            M   S+GG+ Y++    D TR+  V F+KNKS+        V+       L +K +RTDNGGE+   +F +    + I H+Y+ P TPQ NGV+ER    L + A  ++   +       +A+  A  + N+S TTS N  K+P+ELWF K P   +L++FG+V +    S    K+ P+  K VF+G P    T    +  + S+N V+ + V + +   K       T+      ++    L   H+   DA +  P+ +      + +    GE+    F+  +E  E   +         D   +    T +  +P++  +A+      +W++A + E   ++ N  +  V  P+   VIG+K + K     DG V++HK RLVAQG+ Q   + Y E
Sbjct:  197 MNTDSIGGSKYILTFTDDYTRYVTVYFLKNKSEVYEKFQEYVSMVENFTGLKVKTLRTDNGGEYVSNDFSKYCVNKGIVHQYSNPYTPQQNGVSERLNRTLMESAKSMIFHANMPINFWAEAVNTAVYLHNRSPTTSLNM-KTPYELWFSKKPDVSNLKVFGSVCFIHIPSNLRRKLDPRSRKAVFIGYP--LDTKGYKLYDIESKNFVQSKDVVFYE--NKFHDFKVVTKELIIREDVPEEKLSVDHEQHHDAEDQVPVPTVPDIEDKENLPAVGESYEESFMKQVENLETKRQRKAPKKFSPDECNITESLTAENEKPQSISEALNDANASKWKQALKEEYNSLISNETWELVPPPEGCNVIGSKWVMKIKRDADGNVDRHKARLVAQGYSQTPGIDYEE 593          
BLAST of mRNA_F-serratus_M_contig1278.2048.1 vs. uniprot
Match: A0A7D9DPP1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9DPP1_PARCT)

HSP 1 Score: 134 bits (337), Expect = 1.640e-30
Identity = 114/402 (28.36%), Postives = 187/402 (46.52%), Query Frame = 0
Query:    1 MKHSSLGGNNYVVISVYDCTRFKVVKFVKNKSDTTAALLSLVADYITLQKLSIKCIRTDNGGEF-EVEFQRELDRRSITHEYTPPDTPQYNGVAERALGFLRKKAIILMEELD-------DAMFYACDVTNKSVTTSANGGKSPHELWFGKFPTADHLRLFGAVGYAR-QSVREHKMAPKGEKCVFMGIPRNFPTGTVSVLLVRSRNNVERQAVQWIDGTKKTGSDGTGTEAASGSANLERPTLPALHKLTIDA-NITPILSSRTRTRRPHTGVEGEALH-CFLPAIEAEEENGEEDVLA--CDDGGQMAMQPTLDVPEPRNRRQAMELHEWDEWRKAEETEMLGMVENCVYNQVARPKDMLVIGTKMLYKRIIGQDGKVEKHKCRLVAQGFWQVEDVHYTE 389
            M   S+GG+ Y++    D TR+  V F+KNKS+        V+       L +K +RTDNGGE+   +F +    + I H+Y+ P TPQ NGV+ER    L + A  ++   +       +A+  A  + N+S TTS N  K+P+ELWF K P   +L++FG+V +    S    K+ P+  K VF+G P    T    +  + S+N V  + V + +   K       T+      ++    L   H+   DA +  P+ +        +    GE+    F+  +E  E   +         D   +    T +  EP++  +A+      +W++A + E   ++ N  +  V  P+   VIG+K + K     DG V++HK RLVAQG+ Q   + Y E
Sbjct:  445 MNTDSIGGSKYILTFTDDYTRYVTVYFLKNKSEVYEKFQEYVSMVENFTGLKVKTLRTDNGGEYVSNDFSKYCVNKGIVHQYSNPYTPQQNGVSERLNRTLMESAKSMIFHANMPINFWAEAVNTAVYLHNRSPTTSLNM-KTPYELWFSKKPDVSNLKVFGSVCFIHIPSNLRRKLDPRSRKAVFIGYP--LDTKGYKLYDIESKNFVRSKDVVFYE--NKFHDFKVVTKELIIREDVPEEKLSVDHEQHHDAEDQVPVPTVPDIEDEENLPAVGESYEESFMKQVENLETKRQRKAPKKFSPDECNITESLTAENEEPQSISEALNGANASKWKQALKEEYNSLISNETWELVPPPEGCNVIGSKWVMKIKRDADGNVDRHKARLVAQGYSQTPGIDYEE 841          
BLAST of mRNA_F-serratus_M_contig1278.2048.1 vs. uniprot
Match: UPI001C97B5BC (DDE-type integrase/transposase/recombinase n=2 Tax=Actinobacteria TaxID=201174 RepID=UPI001C97B5BC)

HSP 1 Score: 133 bits (334), Expect = 3.470e-30
Identity = 117/401 (29.18%), Postives = 178/401 (44.39%), Query Frame = 0
Query:    7 GGNNYVVISVYDCTRFKVVKFVKNKSDTTAALLSLVADYITLQKLSIKCIRTDNGGEF-EVEFQRELDRRSITHEYTPPDTPQYNGVAERALGFLRKKAIILME-----------ELDDAMFYACDVTNKSVTTSANGGKSPHELWFGKFPTADHLRLFGAVGYARQSVREHKMAPKGEKCVFMGIPRN------FPTGTVSVLLVRSRNNVERQAVQWIDGTKKTGSDGTGTEAASGSANLERPTLPALHKLTIDANITPILSSRTRTRRPHTGVEGEALHCFLPAIEAEEENGEEDVLACDDGGQMAMQPTLDVPEPRNRRQAMELHEWDEWRKAEETEMLGMVENCVYNQVARPKDMLVIGTKMLYKRIIGQDGKVEKHKCRLVAQGFWQVEDVHYTE 389
            GG  Y +    D +R   V  +K+KS++        A+       SIK +R+D GGE+   EF   L    I  ++TPP TPQ NGV+ER    L      ++             L+ A +    V +KSV       K+P+E+W+GK P+  HLR++G+V Y +      K+  +  KC F+G P+       + T    V + +    +E++ +Q  +G K    D    E  S S  +   T PA     ++A  T     R   R     V    LH     +   ++   +D    +  G M     LD+   R             W++A E+EM  M  N V+  V  P+ ++ IG K +YKR IG DGKVE +K RLVA+G+ Q + V Y +
Sbjct:  199 GGFTYFITFTDDHSRLGTVYLMKHKSESFEKFKEYRAEVEKQTGKSIKALRSDRGGEYLTTEFLDHLTEAGILSQWTPPGTPQLNGVSERRNRTLMDMVRSMLSYTDMSISFWGYALETAAYLLNRVPSKSVP------KTPYEMWYGKKPSLKHLRVWGSVAYVKNQ-NATKLEARSSKCRFVGYPKESLGYYFYHTSEEKVFVSKFAKFLEKEFIQ--EGGKGQVID---LEELSESTQINTDTTPA----PVEAEPTGTQPLRRSGRVSAPPVRYGYLHEMREELFLGDKEHPDDPTTYE--GAM-----LDIDSTR-------------WQQAMESEMDSMYSNQVWTLVNPPEGIVPIGCKWIYKRKIGSDGKVETYKARLVAKGYNQKQGVDYED 563          
BLAST of mRNA_F-serratus_M_contig1278.2048.1 vs. uniprot
Match: A0A438JH99_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JH99_VITVI)

HSP 1 Score: 126 bits (317), Expect = 6.490e-28
Identity = 112/444 (25.23%), Postives = 188/444 (42.34%), Query Frame = 0
Query:    1 MKHSSLGGNNYVVISVYDCTRFKVVKFVKNKSDTTAALLSLVADYITLQKLSIKCIRTDNGGEFEVE-FQRELDRRSITHEYTPPDTPQYNGVAERA-----------LGFLRKKAIILMEELDDAMFYACDVTNKSVTTSANGGKSPHELWFGKFPTADHLRLFGAVGYARQSVREHKMAPKGEKCVFMGIPRN------FPTGTVSVLLVRSRNNVERQAVQWIDGTKKTGSDGTGTEAASGSANLERPTLPALHKLTIDANITPILSSRTRTRRPHTGVEGEALHCFLPAIEAEEENGEEDVLACDDGG----QMAMQPTLDVPEP---------------------------------RNRRQAMELHEWDEWRKAEETEMLGMVENCVYNQVARPKDMLVIGTKMLYKRIIGQDGKVEKHKCRLVAQGFWQVEDVHYTE 389
            MK  + GG +Y +    D +R+  +  +K+KS++        ++       SIK +R+D GGE+  E F   L    I  ++TPP TPQ+NGV+ER            +GF      +    L+ A +    +  K+V+T+      P+E+W G+ P   H++++G   Y ++ ++  K+  + +KC F+G P+       +      V + R    +ER+ +         GS G   E           T    H++  +     +L S  R + P        +    PAI  E+ N                +   QP   + EP                                 +N  +AM++ + ++W++A E+E+  M  N V+  V   KD+  IG K +YK+ IG DGKVE +K RLVA+G+ Q E + Y E
Sbjct:  364 MKIQAKGGYSYFITFTDDMSRYGFLYLMKHKSESFEMFKRFRSEVEKQTGNSIKVLRSDRGGEYLSENFIDYLRENGILSQWTPPGTPQHNGVSERRNRTLLDMVRSMMGFTDLPVNLWGYALEAAAYLLNKIPTKTVSTT------PYEIWKGRKPNLKHIKVWGCPAYVKK-LQTDKLEARSDKCRFIGYPKETMGYYFYHPLDHKVFVARGGTFLEREFLA-------EGSHGKEIELDETQEETNETTAAQEHEMEFEQPFFDVLKSTQRLQSP-------TIVAPEPAIVQEQVNEXXXXXXXXXXXXXXLEQIQQPLNPIHEPLRRSNRAHRAPDRLNLMVQDDLSNEVHHNDDDPKNYEEAMQILDRNKWQEAMESEIESMKINKVWTLVEASKDIKPIGCKWVYKKKIGADGKVETYKARLVAKGYRQKEGIDYDE 786          
BLAST of mRNA_F-serratus_M_contig1278.2048.1 vs. uniprot
Match: A0A5B7BAK4_DAVIN (Uncharacterized protein n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7BAK4_DAVIN)

HSP 1 Score: 126 bits (317), Expect = 6.610e-28
Identity = 117/410 (28.54%), Postives = 177/410 (43.17%), Query Frame = 0
Query:    4 SSLGGNNYVVISVYDCTRFKVVKFVKNKSDTTAALLSLVADYITLQKLSIKCIRTDNGGEF-EVEFQRELDRRSITHEYTPPDTPQYNGVAERALGFLRKKAIILMEELD-------DAMFYACDVTNKSVTTSANGGKSPHELWFGKFPTADHLRLFGAVGYAR-QSVREHKMAPKGEKCVFMGIPRNFPTGTVSVL--------LVRSRNNVERQAVQWIDGTKKTGSDGTGTEAASGSANLERPTLPALHKLTID--ANITPILSSRTRTRRPHTGVE-----GEALHCFLPAIEAEEENGEEDVLACDDGGQMAMQPTLDVPEPRNRRQAMELHEWDEWRKAEETEMLGMVENCVYNQVARPKDMLVIGTKMLYKRIIGQDGKVEKHKCRLVAQGFWQVEDVHYTE 389
            SSLGG++Y V  + D TR   V F+K+KSD  +      A       L IKC+R+DNGGE+ + EF+       I  E T P TPQ NGVAER    L ++   +            DA+  A  + N+  +   + G  P E W GK     HL++FG V Y    S    K+ PK +KC F+G    + T              + RSR+ +  + V + D +    ++       +G   LE P+   +H    +   NI P +   T    P TG+       +A  C+ P++           L   D G           EP    +A+++ +  +W  A + EM  ++ N  +     PK    +  K +Y+     DG  +++K RLV +GF Q E V YTE
Sbjct:  489 SSLGGSSYYVTFIDDSTRKVWVYFLKSKSDVFSTFKKWKAMVENETGLKIKCLRSDNGGEYTDKEFKEFCATNGIRMEKTIPKTPQQNGVAERMNRTLNERGRSMRIHAGLPKMFWADAVNTAAYLINRGPSVPLDDGL-PEEAWSGKEVNLSHLKVFGCVSYVHIDSDARSKLDPKSKKCTFIG----YGTDEFGYRFWDDQNRKITRSRDVIFNEKVLYKDRSGAESNNADTHAEKTGFVELEEPSESEVHSRVQNNPENIIPQVEPVT----PATGLRRSSRVSKAPQCYSPSLY---------YLLLSDSG-----------EPECYDEALQVGDSAKWESAMQDEMDSLMSNQTWKLTELPKGKKALHNKWVYRIKEEHDGS-KRYKARLVVKGFQQKEGVDYTE 868          
BLAST of mRNA_F-serratus_M_contig1278.2048.1 vs. uniprot
Match: A0A1J3ITQ9_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3ITQ9_NOCCA)

HSP 1 Score: 126 bits (316), Expect = 9.060e-28
Identity = 113/428 (26.40%), Postives = 192/428 (44.86%), Query Frame = 0
Query:    1 MKHSSLGGNNYVVISVYDCTRFKVVKFVKNKSDTTAALLSLVADYITLQKLSIKCIRTDNGGEFEVEFQREL-DRRSITHEYTPPDTPQYNGVAERALGFLRKKAIILMEELD-------DAMFYACDVTNKSVTTSANGGKSPHELWFGKFPTADHLRLFGAVGYARQSVRE-HKMAPKGEKCVFMGIPRNFPTGTV----SVLLVRSRNNV--------------------ERQAVQWIDGTKKTGSDGTGTEAASGSANLERPTLPALHKLTIDANITPILSSRTRTR------RPHTGVEGEALHCFLPAIEAEEENGEEDVLACDDGGQMAMQPTLDVPEPRNRRQAMELHEWDEWRKAEETEMLGMVENCVYNQVARPKDMLVIGTKMLYKRIIGQDGKVEKHKCRLVAQGFWQVEDVHYTE 389
            M+  S+GG  YV + V D +R+  V+F+++KSDT A+        IT +K S+KCIR+D+GGEF+ +   +  + + I H+++ P TPQ NGV ER    L++ A  ++   +       +A+  AC + N+     A G K+P+ELW GK P   + R+FG   +      +  K   + ++ +F+G   N     V    S +++ S N V                    +  A + +DGT +   D    E       +  P +  +H+    +++   ++   +TR      +    +      CF+ AIE                             P+N  +A+E  +W     + E E+   V N V+  V  P+ + V+GTK ++K      G + ++K RLVAQG+ QVE V + E
Sbjct:  550 MQVESIGGKRYVYVLVDDYSRYTWVRFIRDKSDTVASFKIWALQVIT-EKGSLKCIRSDHGGEFQNKVMTKFCNEQGIAHQFSAPRTPQMNGVVERKNRTLQEMAQAMIHGGNIPVKFWAEAINTACYIINRVYMRKALG-KTPYELWKGKTPNLSYFRVFGCRCFILNDKDQLGKFDSRSDEGIFLGYSGNSSAFRVFNFQSKMVMESVNVVFDDRSIAVIGDSPVFHEAESKTPAEEEVDGTSEKDEDKE-EEMTDKVVEVRHP-VTQVHRNHSSSDLIGDITEGRKTRGIKLNFKQMVSMAIIQFECFVSAIE-----------------------------PQNHLEALEDADWI---ISMEEELEEFVRNDVWELVPLPEGVNVVGTKWIFKNKTDDAGSIVRNKSRLVAQGYSQVEGVDFDE 941          
BLAST of mRNA_F-serratus_M_contig1278.2048.1 vs. uniprot
Match: A0A2N9IUC8_FAGSY (Integrase catalytic domain-containing protein n=2 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IUC8_FAGSY)

HSP 1 Score: 125 bits (315), Expect = 1.000e-27
Identity = 111/402 (27.61%), Postives = 185/402 (46.02%), Query Frame = 0
Query:    1 MKHSSLGGNNYVVISVYDCTRFKVVKFVKNKSDTTAALLSLVADYITLQKLSIKCIRTDNGGEFEV-EFQRELDRRSITHEYTPPDTPQYNGVAERALGFLRK--KAIILMEEL---------DDAMFYACDVTNKSVTTSANGGKSPHELWFGKFPTADHLRLFGAVGYARQSVREHKMAPKGEKCVFMGIPRNFPTGTVSVLLVRSRNNVERQAVQWIDGTKKTGSDGTGTEAASGSANLERPTLPALHKLTIDANITPILSSRTRTRRPHTGVEGEALHC-FLPAIEAEEENGEEDVLACDDGGQMAMQPTLDVPEPRNRRQAMELHEWDEWRKAEETEMLGMVENCVYNQVARPKDMLVIGTKMLYKRIIGQDGKVEKHKCRLVAQGFWQVEDVHYTE 389
            + H + GG  Y +  + D +R+  +  +K+KS++         +        IK +R+D GGE+ + EF+  L    I  + TPP TPQ+NGVAER    L    ++++ M EL         + A++    V  KSV  +      P+ELW GK P+ +H++++G   + R+S    K+ P+ ++C+F+G P+   TG         +  V R A+   +      S    T+      N    T+P+ +    +  I P   S  +  R  T +    +    L  I   E +G ++                   +P   ++AM   + + W+KA E+EM  M  N V+  V +P+ +  IG K +YKR +G  GKVE +K RLVA+G+ Q   + Y E
Sbjct:   28 LTHMARGGFFYFITFIDDHSRYGYLYLMKHKSESFEKFKEFRNEVEKQTGKCIKILRSDRGGEYFLDEFKDYLKDNGIISQLTPPGTPQHNGVAERRNRTLLDMVRSMMSMSELPVSFWGYALETAIYLLNRVPTKSVPNT------PYELWTGKKPSLNHIKIWGCPSHVRKS-NVDKLGPRSDRCLFVGYPK-MSTGFYFYNPSEQKVFVSRNAIFLEEDYSLNESR---TKVTLEEQNDRPMTVPSENNE--EQVIVPTEPSNMQEPRRSTRIIRPPVRLTLLNEIYQMESDGFDN-------------------DPVTYQEAMNDKDVEHWKKAMESEMDSMYTNQVWTLVDKPEGIKPIGCKWIYKRKLGPTGKVETYKVRLVAKGYTQKAGIDYEE 397          
BLAST of mRNA_F-serratus_M_contig1278.2048.1 vs. uniprot
Match: A0A438K5H3_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438K5H3_VITVI)

HSP 1 Score: 125 bits (313), Expect = 1.810e-27
Identity = 112/444 (25.23%), Postives = 187/444 (42.12%), Query Frame = 0
Query:    1 MKHSSLGGNNYVVISVYDCTRFKVVKFVKNKSDTTAALLSLVADYITLQKLSIKCIRTDNGGEFEVE-FQRELDRRSITHEYTPPDTPQYNGVAERA-----------LGFLRKKAIILMEELDDAMFYACDVTNKSVTTSANGGKSPHELWFGKFPTADHLRLFGAVGYARQSVREHKMAPKGEKCVFMGIPRN------FPTGTVSVLLVRSRNNVERQAVQWIDGTKKTGSDGTGTEAASGSANLERPTLPALHKLTIDANITPILSSRTRTRRPHTGVEGEALHCFLPAIEAEEENGEEDVLACDDGG----QMAMQPTLDVPEP---------------------------------RNRRQAMELHEWDEWRKAEETEMLGMVENCVYNQVARPKDMLVIGTKMLYKRIIGQDGKVEKHKCRLVAQGFWQVEDVHYTE 389
            MK  + GG +Y +    D +R+  +  +K+KS++        ++       SIK +R+D GGE+  E F   L    I  ++TPP TPQ+NGV+ER            +GF      +    L+ A +    +  K+V+T+      P+E+W G+ P   H++++G   Y ++ ++  K+  + +KC F+G P+       +      V + R    +ER+ +         GS G   E           T    H++  +     +L S  R + P        +    PAI  E+ N                +   QP   + EP                                 +N  +AM+  + ++W++A E+E+  M  N V+  V   KD+  IG K +YK+ IG DGKVE +K RLVA+G+ Q E + Y E
Sbjct:   28 MKIQAKGGYSYFITFTDDMSRYGFLYLMKHKSESFEMFKRFRSEVEKQTGNSIKVLRSDRGGEYLSENFIDYLRENGILSQWTPPGTPQHNGVSERRNRTLLDMVRSMMGFTDLPVNLWGYALEAAAYLLNKIPTKTVSTT------PYEIWKGRKPNLKHIKVWGCPAYVKK-LQTDKLEARSDKCRFIGYPKETMGYYFYHPLDHKVFVARGGTFLEREFLA-------EGSHGKEIELDETQEETNETTAAQEHEMEFEQPFFDVLKSTQRLQSP-------TIVAPEPAIVQEQVNEXXXXXXXXXXXXXXLEQIQQPLNPIHEPLRRSSRAHRAPDRLNLMVQDDLSNEVHHNDDDPKNYEEAMQSLDRNKWQEAMESEIESMKINKVWTLVEASKDIKPIGCKWVYKKKIGADGKVETYKARLVAKGYRQKEGIDYDE 450          
BLAST of mRNA_F-serratus_M_contig1278.2048.1 vs. uniprot
Match: UPI001EFFA561 (DDE-type integrase/transposase/recombinase n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001EFFA561)

HSP 1 Score: 124 bits (312), Expect = 2.780e-27
Identity = 112/422 (26.54%), Postives = 181/422 (42.89%), Query Frame = 0
Query:    1 MKHSSLGGNNYVVISVYDCTRFKVVKFVKNKSDTTAALLSLVADYITLQKLSIKCIRTDNGGEFEVEFQRELDRRSITHEYTPPDTPQYNGVAERALGFLRKKAIILMEELD-------DAMFYACDVTNKSVTTSANGGKSPHELWFGKFPTADHLRLFGAVGYARQSVREH-KMAPKGEKCVFMGIPRNF----PTGTVSVLLVRSRNNV--ERQAVQWIDGTKKTGSDGTGTEAASGSANLERPTLPALHKLTIDANITPILSSRTRTRRPHTGVEG--EALHCFLPAIEAEEENG-----------------EEDVLACDDGGQMAMQPTLDVPEPRNRRQAMELHEWDEWRKAEETEMLGMVENCVYNQVARPKDMLVIGTKMLYKRIIGQDGKVEKHKCRLVAQGFWQVEDVHYTE 389
            MK  +LGG  Y V  + DC+R   V  +K K           A         +KCIRTDNGGE+   F      + I H+ TPP TPQ NG+AER    L ++   L+ E         +A+  A  V N S T +  G   P+++W+GK  + DHLR+FG   +      E  K+  K  +C+F+G   +         +   LVRSR+ V  E Q ++ I+  +K  S      ++ G  +++     ++H +     +     ++   +  H  ++   + +    PA E  +E                     + +   DGG           EP   ++AME     +W +A + EM  + EN  Y  V  PK M  +  K ++K  I +  +  ++K RLV +GF Q + + + E
Sbjct:  256 MKTKTLGGALYFVTFIDDCSRKLWVYVLKTKDQVLGVFKQFQASVERETGKKLKCIRTDNGGEYCGPFDEYCKHQGIRHQKTPPKTPQLNGLAERMNRTLMERVRCLLSEAKLPNSFWGEALLTAAHVINLSPTVALQGDV-PNKVWYGKDVSYDHLRVFGCKAFVHVPKDERSKLDAKTRQCIFVGYGLDEFGYRLYDPIEKKLVRSRDIVFMENQTIEDIEKAEKLESS-----SSDGVVHIDEVPHASVHDV---GGLDDRDEAQDHVQDQHVDIDNNNDGVINDPPAHEVVDEPNIPLRRSTRQRVPSSRYSSNEYMLLTDGG-----------EPECYKEAMEDEHRGQWIEAMQDEMKSLHENHTYELVKLPKGMKALKNKWVFKVKIEEHTQKPRYKARLVVKGFGQRKGIDFDE 657          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1278.2048.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6S7H8C9_PARCT5.680e-3128.61Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A6S7GFZ2_PARCT1.410e-3028.11Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A7D9DPP1_PARCT1.640e-3028.36Retrovirus-related Pol poly from transposon TNT 1-... [more]
UPI001C97B5BC3.470e-3029.18DDE-type integrase/transposase/recombinase n=2 Tax... [more]
A0A438JH99_VITVI6.490e-2825.23Retrovirus-related Pol polyprotein from transposon... [more]
A0A5B7BAK4_DAVIN6.610e-2828.54Uncharacterized protein n=1 Tax=Davidia involucrat... [more]
A0A1J3ITQ9_NOCCA9.060e-2826.40Retrovirus-related Pol polyprotein from transposon... [more]
A0A2N9IUC8_FAGSY1.000e-2727.61Integrase catalytic domain-containing protein n=2 ... [more]
A0A438K5H3_VITVI1.810e-2725.23Retrovirus-related Pol polyprotein from transposon... [more]
UPI001EFFA5612.780e-2726.54DDE-type integrase/transposase/recombinase n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 7..102
e-value: 4.5E-11
score: 43.0
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 1..144
score: 13.928
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..164
e-value: 1.0E-16
score: 62.7
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 53..95
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 53..95
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 8..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1278contigF-serratus_M_contig1278:242711..244141 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1278.2048.1mRNA_F-serratus_M_contig1278.2048.1Fucus serratus malemRNAF-serratus_M_contig1278 242693..245422 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1278.2048.1 ID=prot_F-serratus_M_contig1278.2048.1|Name=mRNA_F-serratus_M_contig1278.2048.1|organism=Fucus serratus male|type=polypeptide|length=391bp
MKHSSLGGNNYVVISVYDCTRFKVVKFVKNKSDTTAALLSLVADYITLQK
LSIKCIRTDNGGEFEVEFQRELDRRSITHEYTPPDTPQYNGVAERALGFL
RKKAIILMEELDDAMFYACDVTNKSVTTSANGGKSPHELWFGKFPTADHL
RLFGAVGYARQSVREHKMAPKGEKCVFMGIPRNFPTGTVSVLLVRSRNNV
ERQAVQWIDGTKKTGSDGTGTEAASGSANLERPTLPALHKLTIDANITPI
LSSRTRTRRPHTGVEGEALHCFLPAIEAEEENGEEDVLACDDGGQMAMQP
TLDVPEPRNRRQAMELHEWDEWRKAEETEMLGMVENCVYNQVARPKDMLV
IGTKMLYKRIIGQDGKVEKHKCRLVAQGFWQVEDVHYTEK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR036397RNaseH_sf
IPR039537Retrotran_Ty1/copia-like
IPR012337RNaseH-like_sf