mRNA_F-serratus_M_contig9.20369.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig9.20369.1 vs. uniprot
Match: A0A6H5JRN4_9PHAE (NYN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRN4_9PHAE) HSP 1 Score: 276 bits (705), Expect = 3.060e-86 Identity = 140/169 (82.84%), Postives = 151/169 (89.35%), Query Frame = 3
Query: 114 ERTQRVAIFVDVENVLGWLKRGGCSELLSKARELGVVSIRRAFGDFSNPTVSSRQEELQRHGFDLVHTLHPAKSKSNSADISMTIDVMESCRGSEIQWVVLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSTSVALSCHEFIFTDEG---RSGS----RRRGAKATRS 599
ER QRV +FVDVENVLGWLKRGGC+ELL+KA ELGVV IRRAFGDFSN TV+SRQ+ELQRHGFDLVHT+HPAK KSNSADISMTIDVMESCRG +IQWVVLATGDSDFGPVFRRLRELGKGV+GVGPSSVLS+SVALSCHEFIFTD+ RSGS RR+G K RS
Sbjct: 16 ERKQRVGVFVDVENVLGWLKRGGCTELLAKAGELGVVGIRRAFGDFSNATVASRQDELQRHGFDLVHTVHPAKGKSNSADISMTIDVMESCRGPDIQWVVLATGDSDFGPVFRRLRELGKGVIGVGPSSVLSSSVALSCHEFIFTDDSNSSRSGSANKGRRKGGKGDRS 184
BLAST of mRNA_F-serratus_M_contig9.20369.1 vs. uniprot
Match: K9F5K4_9CYAN (HTH OST-type domain-containing protein n=1 Tax=Leptolyngbya sp. PCC 7375 TaxID=102129 RepID=K9F5K4_9CYAN) HSP 1 Score: 173 bits (438), Expect = 7.070e-49 Identity = 87/144 (60.42%), Postives = 107/144 (74.31%), Query Frame = 3
Query: 126 RVAIFVDVENVLGWLKRGGCSELLSKARELGVVSIRRAFGDFSNPTVSSRQEELQRHGFDLVHTLHPAKSKSNSADISMTIDVMES-CRGSEIQWVVLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSTSVALSCHEFIFTDE 554
+VAIF+DVEN+ GWLK G LL +A ELG V +RRA+GDFS P++S+RQ EL GF+ VH HP K K NSADI + +DVME R +++WV+LATGDSDF P+FRRLRELGK VVGVGP S LS +V SC+ FI+ DE
Sbjct: 4 KVAIFLDVENLSGWLKADGGESLLDRANELGRVVVRRAYGDFSIPSISARQIELNLLGFEFVHVYHPVKGK-NSADIQIVVDVMEYIARIPDLEWVILATGDSDFSPLFRRLRELGKSVVGVGPQSALSEAVKKSCNRFIYIDE 146
BLAST of mRNA_F-serratus_M_contig9.20369.1 vs. uniprot
Match: A0A2W7ACP4_9CYAN (HTH OST-type domain-containing protein n=1 Tax=Leptolyngbya sp. TaxID=47254 RepID=A0A2W7ACP4_9CYAN) HSP 1 Score: 173 bits (438), Expect = 9.230e-49 Identity = 88/146 (60.27%), Postives = 108/146 (73.97%), Query Frame = 3
Query: 120 TQRVAIFVDVENVLGWLKRGGCSELLSKARELGVVSIRRAFGDFSNPTVSSRQEELQRHGFDLVHTLHPAKSKSNSADISMTIDVMES-CRGSEIQWVVLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSTSVALSCHEFIFTDE 554
T +VAIF+DVEN+ GWLK G LL +A ELG V +RRA+GDFS P V +RQ EL GF+ VH HPAK K NSADI + +DVME R +++W+VLATGDSDF P+FRRLRE+GK VVGVGP SVLS +V SC+ FI+ +E
Sbjct: 2 TDKVAIFLDVENLSGWLKSDGGEALLERANELGRVVVRRAYGDFSIPAVIARQTELNLLGFEFVHVYHPAKGK-NSADIQIVVDVMEYLARIPDLEWIVLATGDSDFSPLFRRLREMGKSVVGVGPRSVLSEAVKKSCNRFIYINE 146
BLAST of mRNA_F-serratus_M_contig9.20369.1 vs. uniprot
Match: UPI0017466E78 (NYN domain-containing protein n=1 Tax=Phormidium tenue TaxID=126344 RepID=UPI0017466E78) HSP 1 Score: 172 bits (437), Expect = 9.300e-49 Identity = 90/148 (60.81%), Postives = 108/148 (72.97%), Query Frame = 3
Query: 123 QRVAIFVDVENVLGWLKRGGCSELLSKARELGVVSIRRAFGDFSNPTVSSRQEELQRHGFDLVHTLHPAKSKSNSADISMTIDVMESC-RGSEIQWVVLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSTSVALSCHEFIFTDEGRS 563
++VAIF+DVEN+ GWLK G + LL A ELG V +RRA+GDFSNP VS RQ EL GF+ V HP K K NSADI + +DVME R +++W+VLATGDSDF P+FRRLREL K VVGVGP SVLS +V SC +FI+ DEG S
Sbjct: 3 EKVAIFLDVENLSGWLKADGGATLLEHASELGRVVVRRAYGDFSNPAVSVRQPELNLLGFEFVQVYHPVKGK-NSADIQIVVDVMEYLTRIPDLEWIVLATGDSDFSPLFRRLRELDKSVVGVGPRSVLSEAVKKSCSQFIYIDEGFS 149
BLAST of mRNA_F-serratus_M_contig9.20369.1 vs. uniprot
Match: A0A6H9GN88_MICAE (HTH OST-type domain-containing protein n=5 Tax=Microcystis aeruginosa TaxID=1126 RepID=A0A6H9GN88_MICAE) HSP 1 Score: 170 bits (431), Expect = 7.720e-48 Identity = 88/145 (60.69%), Postives = 106/145 (73.10%), Query Frame = 3
Query: 123 QRVAIFVDVENVLGWLKRGGCSELLSKARELGVVSIRRAFGDFSNPTVSSRQEELQRHGFDLVHTLHPAKSKSNSADISMTIDVMES-CRGSEIQWVVLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSTSVALSCHEFIFTDE 554
++VAIF+DVEN+ GWLK G LL +A ELG V +RRA+GDFS +VS RQ EL GF+ VH HP K K NSADI + +DVME R +++WVVLATGDSDF P+FRRLRELGK VVGVGP S LS +V SC+ FI+ DE
Sbjct: 3 EKVAIFLDVENLSGWLKADGGEALLERANELGRVVVRRAYGDFSIASVSVRQPELNLLGFEFVHVYHPVKGK-NSADIQIVVDVMEYLARIPDLEWVVLATGDSDFSPLFRRLRELGKSVVGVGPRSALSEAVKKSCNRFIYIDE 146
BLAST of mRNA_F-serratus_M_contig9.20369.1 vs. uniprot
Match: A0A1C0V8K5_9CYAN (HTH OST-type domain-containing protein n=3 Tax=unclassified Limnothrix TaxID=2632864 RepID=A0A1C0V8K5_9CYAN) HSP 1 Score: 170 bits (430), Expect = 1.160e-47 Identity = 88/144 (61.11%), Postives = 105/144 (72.92%), Query Frame = 3
Query: 126 RVAIFVDVENVLGWLKRGGCSELLSKARELGVVSIRRAFGDFSNPTVSSRQEELQRHGFDLVHTLHPAKSKSNSADISMTIDVMES-CRGSEIQWVVLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSTSVALSCHEFIFTDE 554
+VAIF+DVEN+ GWLK G LL +A ELG V +RRA+GDFS +VS RQ EL GF+ VH HP K K NSADI + +DVME R +++WVVLATGDSDF P+FRRLRELGK VVGVGP S LS +V SC+ FI+ DE
Sbjct: 4 KVAIFLDVENLSGWLKADGGETLLERANELGRVVVRRAYGDFSIQSVSVRQPELNLLGFEFVHVYHPVKGK-NSADIQIVVDVMEYLARVPDLEWVVLATGDSDFSPLFRRLRELGKSVVGVGPRSALSEAVKKSCNRFIYIDE 146
BLAST of mRNA_F-serratus_M_contig9.20369.1 vs. uniprot
Match: B4VU65_9CYAN (HTH OST-type domain-containing protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 TaxID=118168 RepID=B4VU65_9CYAN) HSP 1 Score: 169 bits (429), Expect = 1.430e-47 Identity = 88/145 (60.69%), Postives = 106/145 (73.10%), Query Frame = 3
Query: 123 QRVAIFVDVENVLGWLKRGGCSELLSKARELGVVSIRRAFGDFSNPTVSSRQEELQRHGFDLVHTLHPAKSKSNSADISMTIDVMES-CRGSEIQWVVLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSTSVALSCHEFIFTDE 554
++VAIF+DVEN+ GWLK G LL +A ELG V +RRA+GDFS +VS RQ EL GF+ VH HP K K NSADI + +DVME R +++WVVLATGDSDF P+FRRLRELGK VVGVGP S LS +V SC+ FI+ DE
Sbjct: 3 EKVAIFLDVENLSGWLKVDGGEALLERANELGRVVVRRAYGDFSIASVSVRQPELNLLGFEFVHVYHPVKGK-NSADIQIVVDVMEYLARIPDLEWVVLATGDSDFSPLFRRLRELGKSVVGVGPRSALSEAVKKSCNRFIYIDE 146
BLAST of mRNA_F-serratus_M_contig9.20369.1 vs. uniprot
Match: D8LAX9_ECTSI (NYN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAX9_ECTSI) HSP 1 Score: 167 bits (422), Expect = 5.420e-47 Identity = 80/92 (86.96%), Postives = 86/92 (93.48%), Query Frame = 3
Query: 114 ERTQRVAIFVDVENVLGWLKRGGCSELLSKARELGVVSIRRAFGDFSNPTVSSRQEELQRHGFDLVHTLHPAKSKSNSADISMTIDVMESCR 389
ER QRV +FVDVENVLGWLKRGGC+ELL+KA ELGVV IRRAFGDFSN TV+SRQ+ELQRHGFDLVHT+HPAK KSNSADISMTIDVMESCR
Sbjct: 16 ERKQRVGVFVDVENVLGWLKRGGCTELLAKAGELGVVGIRRAFGDFSNATVASRQDELQRHGFDLVHTVHPAKGKSNSADISMTIDVMESCR 107
BLAST of mRNA_F-serratus_M_contig9.20369.1 vs. uniprot
Match: UPI00168003E0 (NYN domain-containing protein n=1 Tax=Leptolyngbya sp. FACHB-36 TaxID=2692808 RepID=UPI00168003E0) HSP 1 Score: 167 bits (424), Expect = 8.410e-47 Identity = 86/146 (58.90%), Postives = 107/146 (73.29%), Query Frame = 3
Query: 120 TQRVAIFVDVENVLGWLKRGGCSELLSKARELGVVSIRRAFGDFSNPTVSSRQEELQRHGFDLVHTLHPAKSKSNSADISMTIDVMES-CRGSEIQWVVLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSTSVALSCHEFIFTDE 554
+++VAIF+DVEN+ GWLK G LL +A ELG V +RRA+GDFS +VS RQ EL GF+ VH HP K K NSADI + +DVME R +++WVVLATGDSDF P+FRRLRELGK V+GVGP S LS +V +C+ FI+ DE
Sbjct: 2 SEKVAIFLDVENLSGWLKADGGETLLERANELGRVVVRRAYGDFSILSVSVRQPELNLLGFEFVHVYHPVKGK-NSADIQIVVDVMEYLARIPDLEWVVLATGDSDFSPLFRRLRELGKSVMGVGPRSALSEAVKRTCNRFIYIDE 146
BLAST of mRNA_F-serratus_M_contig9.20369.1 vs. uniprot
Match: K9ZNR7_ANACC (Uncharacterized protein n=2 Tax=Anabaena TaxID=1163 RepID=K9ZNR7_ANACC) HSP 1 Score: 167 bits (423), Expect = 1.530e-46 Identity = 84/143 (58.74%), Postives = 103/143 (72.03%), Query Frame = 3
Query: 126 RVAIFVDVENVLGWLKRGGCSELLSKARELGVVSIRRAFGDFSNPTVSSRQEELQRHGFDLVHTLHPAKSKSNSADISMTIDVMESC-RGSEIQWVVLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSTSVALSCHEFIFTD 551
+V IF+D+EN+ GWLK G LL +A ELG V +RRA+GDFS P+VS RQ EL GF+ VH HP K K NSADI + +DVME R ++QW VLATGD+DF P+FRRL+ELGK VVG+GP S LS V SC+ FI+TD
Sbjct: 4 KVGIFLDIENLAGWLKLDGGETLLDRASELGSVVVRRAYGDFSLPSVSKRQSELNLLGFEFVHVYHPVKGK-NSADIQIVVDVMEYLTRVPDLQWFVLATGDADFSPLFRRLKELGKSVVGIGPKSKLSEVVKKSCNRFIYTD 145 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig9.20369.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig9.20369.1 >prot_F-serratus_M_contig9.20369.1 ID=prot_F-serratus_M_contig9.20369.1|Name=mRNA_F-serratus_M_contig9.20369.1|organism=Fucus serratus male|type=polypeptide|length=176bp MPVGVLERTQRVAIFVDVENVLGWLKRGGCSELLSKARELGVVSIRRAFGback to top mRNA from alignment at F-serratus_M_contig9:917469..923158+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig9.20369.1 ID=mRNA_F-serratus_M_contig9.20369.1|Name=mRNA_F-serratus_M_contig9.20369.1|organism=Fucus serratus male|type=mRNA|length=5690bp|location=Sequence derived from alignment at F-serratus_M_contig9:917469..923158+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig9:917469..923158+ >mRNA_F-serratus_M_contig9.20369.1 ID=mRNA_F-serratus_M_contig9.20369.1|Name=mRNA_F-serratus_M_contig9.20369.1|organism=Fucus serratus male|type=CDS|length=1056bp|location=Sequence derived from alignment at F-serratus_M_contig9:917469..923158+ (Fucus serratus male)back to top |